View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0218_low_30 (Length: 365)

Name: NF0218_low_30
Description: NF0218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0218_low_30
NF0218_low_30
[»] chr3 (60 HSPs)
chr3 (30-331)||(9800015-9800316)
chr3 (206-327)||(9801780-9801901)
chr3 (31-124)||(4990957-4991050)
chr3 (30-114)||(8383232-8383316)
chr3 (44-185)||(8039764-8039905)
chr3 (30-162)||(15796246-15796378)
chr3 (47-170)||(28812507-28812630)
chr3 (30-185)||(41961579-41961734)
chr3 (30-116)||(28917976-28918062)
chr3 (46-111)||(26508101-26508166)
chr3 (30-125)||(750607-750703)
chr3 (30-114)||(8587021-8587105)
chr3 (35-114)||(10954932-10955011)
chr3 (62-125)||(14832106-14832169)
chr3 (62-117)||(49651783-49651838)
chr3 (46-183)||(4987222-4987359)
chr3 (33-114)||(55401053-55401134)
chr3 (54-106)||(17568691-17568743)
chr3 (48-108)||(34307786-34307846)
chr3 (47-115)||(34910309-34910377)
chr3 (46-117)||(14829681-14829751)
chr3 (31-114)||(16000016-16000099)
chr3 (46-117)||(34185120-34185191)
chr3 (53-115)||(1509537-1509599)
chr3 (47-117)||(14209105-14209175)
chr3 (56-170)||(17005563-17005677)
chr3 (46-112)||(20503456-20503522)
chr3 (30-108)||(24205047-24205125)
chr3 (65-114)||(8789550-8789599)
chr3 (34-99)||(11493376-11493441)
chr3 (29-118)||(14216866-14216955)
chr3 (29-118)||(14222995-14223084)
chr3 (47-116)||(21256984-21257053)
chr3 (53-114)||(51206353-51206414)
chr3 (30-114)||(10335286-10335370)
chr3 (46-114)||(21479109-21479177)
chr3 (30-114)||(26492205-26492289)
chr3 (55-114)||(7928450-7928509)
chr3 (62-117)||(25948884-25948939)
chr3 (134-185)||(40993275-40993326)
chr3 (30-88)||(2620079-2620137)
chr3 (29-79)||(12674536-12674586)
chr3 (30-88)||(25064884-25064942)
chr3 (30-108)||(35994744-35994821)
chr3 (63-117)||(39756244-39756298)
chr3 (69-115)||(49179714-49179760)
chr3 (63-97)||(52369783-52369817)
chr3 (30-99)||(5441046-5441115)
chr3 (62-99)||(9624648-9624685)
chr3 (62-107)||(12083910-12083955)
chr3 (134-187)||(20503533-20503586)
chr3 (46-114)||(25775499-25775568)
chr3 (53-89)||(3618879-3618915)
chr3 (47-99)||(5407262-5407314)
chr3 (33-113)||(10268487-10268567)
chr3 (47-99)||(12703999-12704051)
chr3 (29-89)||(14618755-14618815)
chr3 (29-89)||(24633741-24633800)
chr3 (32-88)||(32804566-32804622)
chr3 (69-117)||(44427855-44427903)
[»] chr7 (70 HSPs)
chr7 (30-117)||(27945016-27945103)
chr7 (30-187)||(24339617-24339774)
chr7 (48-114)||(28155563-28155629)
chr7 (62-114)||(21880159-21880211)
chr7 (30-117)||(13770666-13770753)
chr7 (31-117)||(1433430-1433516)
chr7 (29-162)||(19206024-19206157)
chr7 (33-117)||(5409833-5409917)
chr7 (30-114)||(24105653-24105737)
chr7 (42-121)||(3520335-3520414)
chr7 (63-113)||(7438714-7438764)
chr7 (64-117)||(12843172-12843225)
chr7 (29-114)||(26733278-26733363)
chr7 (29-121)||(30731011-30731101)
chr7 (69-121)||(1885587-1885639)
chr7 (42-114)||(7197297-7197369)
chr7 (46-114)||(25481893-25481961)
chr7 (46-121)||(6630905-6630980)
chr7 (44-127)||(11665427-11665510)
chr7 (30-89)||(11722123-11722182)
chr7 (35-114)||(20549771-20549850)
chr7 (62-117)||(26033458-26033513)
chr7 (36-99)||(29787384-29787447)
chr7 (46-117)||(32308111-32308182)
chr7 (30-117)||(43027466-43027553)
chr7 (62-115)||(3991331-3991384)
chr7 (62-115)||(19992008-19992061)
chr7 (37-113)||(1401007-1401083)
chr7 (46-98)||(4008580-4008632)
chr7 (46-98)||(4013972-4014024)
chr7 (63-115)||(9408333-9408385)
chr7 (65-117)||(9778510-9778562)
chr7 (33-113)||(11061077-11061157)
chr7 (33-117)||(18013071-18013155)
chr7 (47-127)||(23128648-23128728)
chr7 (62-106)||(30813819-30813863)
chr7 (29-88)||(5307234-5307293)
chr7 (50-113)||(5835242-5835305)
chr7 (62-117)||(7328688-7328743)
chr7 (50-117)||(7758317-7758384)
chr7 (70-109)||(10547174-10547213)
chr7 (30-125)||(15902797-15902892)
chr7 (63-117)||(18039006-18039061)
chr7 (62-117)||(18215183-18215238)
chr7 (75-162)||(21560523-21560610)
chr7 (46-113)||(22484016-22484083)
chr7 (46-117)||(22602707-22602778)
chr7 (42-125)||(25822642-25822725)
chr7 (48-115)||(35861957-35862024)
chr7 (46-113)||(42720891-42720958)
chr7 (63-117)||(6028633-6028687)
chr7 (53-127)||(8160414-8160488)
chr7 (137-183)||(29998974-29999020)
chr7 (63-137)||(35297649-35297723)
chr7 (30-108)||(43249968-43250046)
chr7 (63-121)||(44172883-44172941)
chr7 (69-114)||(5937421-5937466)
chr7 (50-99)||(11700798-11700847)
chr7 (48-89)||(24289813-24289854)
chr7 (70-127)||(43243092-43243149)
chr7 (29-113)||(598182-598266)
chr7 (54-114)||(4909150-4909210)
chr7 (62-114)||(8234153-8234205)
chr7 (33-117)||(10042915-10042999)
chr7 (137-185)||(10230024-10230072)
chr7 (74-114)||(25956464-25956504)
chr7 (62-117)||(32094017-32094073)
chr7 (54-110)||(38134410-38134466)
chr7 (69-113)||(48438560-48438604)
chr7 (30-118)||(49107796-49107883)
[»] chr6 (64 HSPs)
chr6 (29-185)||(8365448-8365604)
chr6 (30-185)||(16766672-16766827)
chr6 (30-117)||(9027153-9027240)
chr6 (30-117)||(12696299-12696386)
chr6 (30-114)||(9629358-9629442)
chr6 (30-114)||(34595109-34595193)
chr6 (30-187)||(9107297-9107454)
chr6 (30-114)||(426514-426598)
chr6 (46-114)||(6898281-6898349)
chr6 (46-114)||(7977830-7977898)
chr6 (30-117)||(10770671-10770758)
chr6 (35-114)||(20371110-20371189)
chr6 (9-112)||(9658836-9658936)
chr6 (30-114)||(8776973-8777057)
chr6 (30-185)||(10339054-10339210)
chr6 (62-113)||(15489733-15489784)
chr6 (35-117)||(17302536-17302619)
chr6 (46-121)||(25038064-25038139)
chr6 (30-112)||(16833283-16833365)
chr6 (47-117)||(21395305-21395374)
chr6 (31-120)||(3398595-3398683)
chr6 (53-114)||(28715293-28715354)
chr6 (46-114)||(7265593-7265661)
chr6 (63-115)||(9617442-9617494)
chr6 (46-114)||(19040343-19040411)
chr6 (69-117)||(19369831-19369879)
chr6 (55-114)||(7377979-7378038)
chr6 (62-117)||(9025491-9025546)
chr6 (30-121)||(10294082-10294173)
chr6 (35-114)||(17841589-17841668)
chr6 (35-114)||(28152079-28152157)
chr6 (62-117)||(31384927-31384982)
chr6 (55-117)||(2117076-2117137)
chr6 (48-114)||(7801156-7801222)
chr6 (31-113)||(13851712-13851794)
chr6 (31-108)||(1681734-1681811)
chr6 (69-114)||(6751882-6751927)
chr6 (56-109)||(30866149-30866202)
chr6 (30-114)||(853859-853943)
chr6 (30-114)||(5732510-5732594)
chr6 (63-187)||(5970035-5970159)
chr6 (61-117)||(9522897-9522953)
chr6 (47-127)||(26562681-26562761)
chr6 (46-114)||(33001289-33001357)
chr6 (55-114)||(1315937-1315991)
chr6 (30-113)||(7938091-7938174)
chr6 (62-117)||(9195751-9195806)
chr6 (32-107)||(17341671-17341746)
chr6 (30-109)||(31959134-31959213)
chr6 (50-117)||(32320666-32320733)
chr6 (30-117)||(34073344-34073431)
chr6 (81-147)||(785422-785488)
chr6 (63-97)||(29049893-29049927)
chr6 (142-183)||(5569825-5569866)
chr6 (66-127)||(7973665-7973725)
chr6 (76-117)||(9911525-9911566)
chr6 (63-112)||(32299283-32299332)
chr6 (63-119)||(6349732-6349788)
chr6 (56-116)||(7151413-7151473)
chr6 (63-99)||(7569183-7569219)
chr6 (65-117)||(9024173-9024225)
chr6 (66-110)||(10157995-10158039)
chr6 (62-106)||(17435206-17435250)
chr6 (33-113)||(19044442-19044522)
[»] scaffold0004 (1 HSPs)
scaffold0004 (46-184)||(92798-92940)
[»] chr8 (46 HSPs)
chr8 (30-185)||(22651951-22652106)
chr8 (30-114)||(24669408-24669492)
chr8 (53-121)||(25566839-25566907)
chr8 (30-185)||(29510233-29510388)
chr8 (32-114)||(18170482-18170564)
chr8 (32-114)||(18634050-18634132)
chr8 (62-184)||(29447040-29447162)
chr8 (46-121)||(15816122-15816197)
chr8 (55-117)||(27067297-27067357)
chr8 (69-158)||(10497772-10497861)
chr8 (62-114)||(4948659-4948711)
chr8 (46-126)||(13436952-13437032)
chr8 (30-114)||(20873044-20873128)
chr8 (47-111)||(31236580-31236644)
chr8 (64-112)||(40332200-40332248)
chr8 (30-117)||(2572053-2572140)
chr8 (62-117)||(21465419-21465474)
chr8 (35-114)||(36450754-36450833)
chr8 (63-113)||(4298887-4298937)
chr8 (50-112)||(7658458-7658520)
chr8 (63-121)||(11927079-11927137)
chr8 (55-113)||(20679396-20679454)
chr8 (62-115)||(8342979-8343032)
chr8 (52-117)||(25172695-25172760)
chr8 (30-114)||(926788-926872)
chr8 (46-114)||(4786338-4786406)
chr8 (56-112)||(7442846-7442902)
chr8 (46-114)||(22595985-22596053)
chr8 (62-113)||(12606830-12606881)
chr8 (55-114)||(12985392-12985451)
chr8 (47-114)||(13844596-13844663)
chr8 (55-114)||(34897085-34897144)
chr8 (55-125)||(4611534-4611604)
chr8 (47-117)||(24362199-24362269)
chr8 (29-114)||(24413559-24413645)
chr8 (62-112)||(26434187-26434237)
chr8 (42-88)||(27101502-27101548)
chr8 (62-115)||(8343323-8343376)
chr8 (62-99)||(13203648-13203685)
chr8 (30-111)||(25192350-25192431)
chr8 (47-88)||(39954305-39954346)
chr8 (62-114)||(3025558-3025610)
chr8 (63-119)||(11944673-11944729)
chr8 (62-114)||(24613528-24613579)
chr8 (62-114)||(30077387-30077439)
chr8 (63-99)||(34201061-34201097)
[»] scaffold0003 (1 HSPs)
scaffold0003 (30-187)||(241569-241726)
[»] chr5 (47 HSPs)
chr5 (30-114)||(6247597-6247681)
chr5 (30-107)||(6326304-6326381)
chr5 (30-114)||(21191056-21191140)
chr5 (42-114)||(32630735-32630807)
chr5 (30-117)||(21522725-21522812)
chr5 (30-117)||(21533291-21533378)
chr5 (46-117)||(31084314-31084385)
chr5 (46-117)||(39698532-39698603)
chr5 (62-114)||(8420034-8420086)
chr5 (29-117)||(21542004-21542092)
chr5 (42-114)||(28588674-28588746)
chr5 (31-117)||(22423809-22423895)
chr5 (56-118)||(36838544-36838606)
chr5 (36-117)||(19579682-19579763)
chr5 (49-102)||(27932229-27932282)
chr5 (30-110)||(24906305-24906385)
chr5 (55-187)||(32766870-32767002)
chr5 (46-117)||(3966494-3966565)
chr5 (48-115)||(10298562-10298629)
chr5 (30-117)||(13287396-13287483)
chr5 (35-109)||(14674249-14674323)
chr5 (55-117)||(18592073-18592135)
chr5 (46-112)||(19737484-19737550)
chr5 (69-147)||(30080468-30080546)
chr5 (62-124)||(30183556-30183618)
chr5 (53-90)||(19746716-19746753)
chr5 (62-115)||(41633742-41633795)
chr5 (62-111)||(43001807-43001856)
chr5 (53-117)||(6471886-6471950)
chr5 (29-81)||(15410481-15410533)
chr5 (62-114)||(21576745-21576797)
chr5 (46-114)||(33178016-33178084)
chr5 (46-117)||(2436913-2436984)
chr5 (63-114)||(2548395-2548446)
chr5 (33-80)||(5873547-5873594)
chr5 (62-117)||(7677712-7677767)
chr5 (30-114)||(15382452-15382538)
chr5 (62-113)||(42893367-42893418)
chr5 (34-96)||(9449448-9449510)
chr5 (53-107)||(15405062-15405116)
chr5 (30-88)||(22013389-22013447)
chr5 (56-114)||(30502388-30502446)
chr5 (56-114)||(30542731-30542789)
chr5 (67-117)||(41558651-41558701)
chr5 (30-79)||(19820429-19820478)
chr5 (63-99)||(30098334-30098370)
chr5 (142-190)||(35252253-35252301)
[»] chr1 (62 HSPs)
chr1 (29-185)||(47989472-47989627)
chr1 (30-117)||(5376497-5376584)
chr1 (30-117)||(6612168-6612255)
chr1 (30-121)||(10572582-10572673)
chr1 (31-114)||(42359449-42359532)
chr1 (47-117)||(24577183-24577253)
chr1 (29-114)||(41877470-41877555)
chr1 (33-117)||(1486706-1486790)
chr1 (30-117)||(6427325-6427412)
chr1 (30-117)||(7918208-7918295)
chr1 (35-114)||(38078661-38078740)
chr1 (30-112)||(21378553-21378635)
chr1 (75-185)||(31694639-31694749)
chr1 (29-114)||(9709794-9709879)
chr1 (30-114)||(5927340-5927424)
chr1 (46-117)||(113290-113361)
chr1 (46-113)||(36878452-36878519)
chr1 (55-117)||(1704989-1705051)
chr1 (58-108)||(22947742-22947792)
chr1 (31-113)||(23636050-23636132)
chr1 (30-99)||(398780-398849)
chr1 (62-127)||(6332678-6332742)
chr1 (30-187)||(5944256-5944415)
chr1 (53-113)||(18190109-18190169)
chr1 (46-114)||(22881616-22881684)
chr1 (53-121)||(34371712-34371779)
chr1 (46-89)||(609483-609526)
chr1 (30-89)||(2896146-2896205)
chr1 (47-114)||(22515887-22515954)
chr1 (62-109)||(31015050-31015097)
chr1 (35-114)||(46348383-46348462)
chr1 (30-109)||(48450592-48450671)
chr1 (46-108)||(3490396-3490458)
chr1 (47-117)||(9828036-9828106)
chr1 (64-114)||(18337338-18337388)
chr1 (29-99)||(34298410-34298480)
chr1 (63-113)||(40258934-40258984)
chr1 (30-99)||(1262859-1262928)
chr1 (35-116)||(18556454-18556535)
chr1 (45-114)||(19058856-19058925)
chr1 (50-185)||(25361881-25362012)
chr1 (75-115)||(28663628-28663668)
chr1 (30-114)||(39130767-39130851)
chr1 (30-185)||(40917726-40917879)
chr1 (65-117)||(44482240-44482292)
chr1 (55-114)||(51410024-51410084)
chr1 (42-89)||(10475002-10475049)
chr1 (30-117)||(20157347-20157434)
chr1 (46-113)||(28273089-28273156)
chr1 (62-117)||(37055853-37055908)
chr1 (55-117)||(9629897-9629959)
chr1 (67-117)||(25272494-25272544)
chr1 (47-89)||(28674792-28674834)
chr1 (75-117)||(30173759-30173801)
chr1 (62-112)||(32461465-32461515)
chr1 (63-112)||(1864882-1864931)
chr1 (28-117)||(12993167-12993256)
chr1 (69-121)||(24462263-24462315)
chr1 (62-114)||(31672895-31672947)
chr1 (46-114)||(37598823-37598890)
chr1 (62-114)||(40181878-40181930)
chr1 (63-99)||(40747788-40747824)
[»] scaffold0223 (1 HSPs)
scaffold0223 (30-117)||(20147-20234)
[»] chr4 (47 HSPs)
chr4 (30-121)||(847926-848017)
chr4 (30-114)||(23292986-23293070)
chr4 (29-123)||(19482642-19482736)
chr4 (62-117)||(12895113-12895168)
chr4 (62-113)||(24613702-24613753)
chr4 (35-116)||(30298926-30299008)
chr4 (35-116)||(30327794-30327876)
chr4 (42-114)||(2361975-2362047)
chr4 (62-114)||(21945510-21945562)
chr4 (50-114)||(54580023-54580087)
chr4 (55-114)||(8423718-8423777)
chr4 (62-117)||(11596349-11596404)
chr4 (46-117)||(37496695-37496766)
chr4 (65-187)||(5225540-5225662)
chr4 (62-112)||(29205451-29205501)
chr4 (46-115)||(35723383-35723453)
chr4 (33-114)||(12797338-12797418)
chr4 (33-114)||(12895274-12895355)
chr4 (29-108)||(20633459-20633535)
chr4 (30-99)||(36635299-36635368)
chr4 (30-114)||(49431000-49431085)
chr4 (62-127)||(51701265-51701330)
chr4 (46-117)||(28084512-28084584)
chr4 (62-114)||(28964248-28964300)
chr4 (57-117)||(30982875-30982935)
chr4 (62-117)||(3947763-3947818)
chr4 (46-109)||(40613441-40613504)
chr4 (30-108)||(24343482-24343560)
chr4 (53-99)||(37698710-37698756)
chr4 (55-121)||(38148718-38148784)
chr4 (63-97)||(43299988-43300022)
chr4 (63-97)||(43300624-43300658)
chr4 (46-99)||(2234241-2234294)
chr4 (63-112)||(6485613-6485662)
chr4 (56-113)||(7214523-7214580)
chr4 (62-107)||(11135301-11135346)
chr4 (69-114)||(13307891-13307936)
chr4 (63-108)||(19230315-19230360)
chr4 (62-115)||(31800477-31800530)
chr4 (151-188)||(42640609-42640646)
chr4 (64-101)||(44796975-44797012)
chr4 (47-87)||(1074790-1074830)
chr4 (29-89)||(7012040-7012100)
chr4 (205-249)||(13801238-13801282)
chr4 (29-89)||(20521874-20521934)
chr4 (30-106)||(40481612-40481687)
chr4 (33-117)||(40742569-40742653)
[»] chr2 (48 HSPs)
chr2 (47-186)||(11223792-11223930)
chr2 (30-113)||(18841014-18841097)
chr2 (33-183)||(36756275-36756425)
chr2 (35-114)||(37558957-37559036)
chr2 (62-184)||(4882626-4882748)
chr2 (33-114)||(15972851-15972932)
chr2 (30-114)||(19536397-19536482)
chr2 (64-185)||(37419752-37419873)
chr2 (53-121)||(44860318-44860386)
chr2 (30-116)||(20539672-20539758)
chr2 (55-113)||(42832277-42832335)
chr2 (62-123)||(12668414-12668475)
chr2 (30-119)||(15657839-15657928)
chr2 (30-99)||(21616737-21616806)
chr2 (63-112)||(44605141-44605190)
chr2 (50-114)||(2438719-2438783)
chr2 (35-107)||(21374706-21374778)
chr2 (47-187)||(26769503-26769643)
chr2 (30-114)||(30404850-30404934)
chr2 (55-107)||(39323264-39323316)
chr2 (29-108)||(12940941-12941020)
chr2 (62-117)||(18420431-18420486)
chr2 (62-117)||(30717527-30717582)
chr2 (62-120)||(974754-974812)
chr2 (30-119)||(21782815-21782902)
chr2 (63-121)||(40681990-40682048)
chr2 (33-110)||(6940233-6940310)
chr2 (33-114)||(18421941-18422022)
chr2 (30-111)||(23718001-23718082)
chr2 (30-111)||(24105673-24105754)
chr2 (29-114)||(30335391-30335476)
chr2 (44-117)||(33153413-33153486)
chr2 (69-114)||(43586005-43586050)
chr2 (34-117)||(2331773-2331854)
chr2 (31-114)||(21624242-21624326)
chr2 (30-117)||(23058439-23058527)
chr2 (29-125)||(34784971-34785067)
chr2 (46-114)||(38117159-38117227)
chr2 (75-114)||(5040754-5040793)
chr2 (46-113)||(21091714-21091781)
chr2 (62-109)||(34221502-34221549)
chr2 (63-121)||(13273011-13273069)
chr2 (29-114)||(20242727-20242812)
chr2 (49-110)||(30471032-30471093)
chr2 (62-114)||(5367199-5367251)
chr2 (63-99)||(23921261-23921297)
chr2 (33-113)||(34337182-34337257)
chr2 (46-114)||(37411244-37411312)
[»] scaffold0018 (2 HSPs)
scaffold0018 (29-107)||(192256-192334)
scaffold0018 (30-113)||(178819-178903)
[»] scaffold0049 (1 HSPs)
scaffold0049 (33-113)||(63750-63831)
[»] scaffold0136 (1 HSPs)
scaffold0136 (63-185)||(3778-3900)
[»] scaffold0450 (1 HSPs)
scaffold0450 (62-187)||(8562-8687)
[»] scaffold0027 (1 HSPs)
scaffold0027 (30-114)||(46657-46741)
[»] scaffold0306 (1 HSPs)
scaffold0306 (35-114)||(13380-13459)
[»] scaffold0152 (1 HSPs)
scaffold0152 (35-114)||(21868-21947)
[»] scaffold0007 (1 HSPs)
scaffold0007 (30-108)||(225274-225352)
[»] scaffold0011 (1 HSPs)
scaffold0011 (48-113)||(17750-17815)
[»] scaffold0053 (1 HSPs)
scaffold0053 (30-114)||(8773-8857)
[»] scaffold0652 (1 HSPs)
scaffold0652 (31-114)||(462-545)
[»] scaffold0103 (1 HSPs)
scaffold0103 (35-106)||(51791-51862)
[»] scaffold0044 (1 HSPs)
scaffold0044 (46-117)||(53171-53242)
[»] scaffold0036 (1 HSPs)
scaffold0036 (62-121)||(9740-9799)
[»] scaffold0020 (1 HSPs)
scaffold0020 (62-117)||(135309-135364)
[»] scaffold0123 (1 HSPs)
scaffold0123 (47-117)||(44522-44592)
[»] scaffold0376 (1 HSPs)
scaffold0376 (62-115)||(6319-6372)
[»] scaffold0021 (1 HSPs)
scaffold0021 (30-111)||(130457-130538)
[»] scaffold0168 (1 HSPs)
scaffold0168 (29-117)||(21017-21105)
[»] scaffold0122 (1 HSPs)
scaffold0122 (30-117)||(8641-8728)
[»] scaffold0050 (1 HSPs)
scaffold0050 (63-114)||(70286-70337)
[»] scaffold0025 (1 HSPs)
scaffold0025 (63-117)||(23777-23832)
[»] scaffold0008 (1 HSPs)
scaffold0008 (62-117)||(263369-263424)
[»] scaffold0361 (1 HSPs)
scaffold0361 (47-105)||(14522-14580)
[»] scaffold0236 (1 HSPs)
scaffold0236 (63-117)||(25765-25819)
[»] scaffold0019 (1 HSPs)
scaffold0019 (46-185)||(71714-71855)
[»] scaffold0722 (1 HSPs)
scaffold0722 (62-114)||(7032-7084)
[»] scaffold0314 (1 HSPs)
scaffold0314 (69-113)||(8962-9006)
[»] scaffold0246 (1 HSPs)
scaffold0246 (30-106)||(19551-19626)
[»] scaffold0085 (1 HSPs)
scaffold0085 (46-94)||(26384-26432)


Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 30 - 331
Target Start/End: Original strand, 9800015 - 9800316
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||  |||    
T  9800015 gacacgacacgtacactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcggtatcagaga 9800114  T
Q  130 taatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatagatcaagaaccttctcaattgcgacaaatcctagctgttggcata 229  Q
    | |||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9800115 tgatacgtgtcggacacctggacacgcctaatcggaggcgtttccgtgcttcatagatcaagacccttctcaattgcgacaaatcctagctgttggcata 9800214  T
Q  230 gtgacacaaacaggggcatactttttcttggcttctggggtacctcttttaggttcttcatctgccattgcaacaccagcaaaagtggaaacagcagcag 329  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9800215 gtgacacaaacaggggcgtactttttcttggcttctggggtacctcttttaggttcttcatctgccattgcaacaccagcaaaagtggaaacagcagcag 9800314  T
Q  330 ct 331  Q
    ||    
T  9800315 ct 9800316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 327
Target Start/End: Original strand, 9801780 - 9801901
Alignment:
Q  206 cgacaaatcctagctgttggcatagtgacacaaacaggggcatactttttcttggcttctggggtacctcttttaggttcttcatctgccattgcaacac 305  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| ||||||||| | ||||| ||||||||||||||||| |    
T  9801780 cgacaaatcctagctgttgggttagtgacacaaacagggccatactttttcttggcttctggagtacctcttcttggttcatcatctgccattgcaaccc 9801879  T
Q  306 cagcaaaagtggaaacagcagc 327  Q
    |||||| || | ||||||||||    
T  9801880 cagcaacagagcaaacagcagc 9801901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 4991050 - 4990957
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatc 124  Q
    |||||||||| | | |||||| | |||||| |||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  4991050 acacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgtgttggtatc 4990957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 8383232 - 8383316
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||| | |||||||  |||||||| ||||||||||||||    
T  8383232 gacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 8039905 - 8039764
Alignment:
Q  44 attgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcgga 143  Q
    ||||||||||  ||||| |||||||||||||||||||| |||||||  |||||||| | ||||||||||||||| ||| ||| | || | ||||||| ||    
T  8039905 attgacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccga 8039806  T
Q  144 cacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
    |||| | |||||| ||||| || |||| ||  ||||||||||    
T  8039805 caccgggacacgcttaatccgaagagtatctgtgcttcatag 8039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 15796378 - 15796246
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||||| ||| |||||||| |||||   ||||||||||| ||||| | |||||||  ||||||||||| |||||||||||||| ||| ||| | |    
T  15796378 gacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggaca 15796279  T
Q  130 taatacatgtcggacacctgaacacgcctaatc 162  Q
     || || ||||  ||||| ||||||||||||||    
T  15796278 caacacgtgtccaacaccggaacacgcctaatc 15796246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 170
Target Start/End: Original strand, 28812507 - 28812630
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacac 146  Q
    ||||||| |||||  ||||||||||||  |||| |||||||||  |||| ||||||||||||||||||||||||| ||  | |  ||||||||| ||||     
T  28812507 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacag 28812606  T
Q  147 ctgaacacgcctaatcggaggagt 170  Q
    | | |||||||||||| |||||||    
T  28812607 caggacacgcctaatccgaggagt 28812630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 41961734 - 41961579
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||||  ||| |||||||| | |||  |||||||||||| || || |||| ||||  |||||||||||||||||||||||||| ||||||| | |    
T  41961734 gacacgacacagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggaca 41961635  T
Q  130 taatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
      | || |||| |||||  | |||||||||||| ||| ||| ||| ||||||||||    
T  41961634 cgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 28917976 - 28918062
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtg 116  Q
    ||||||||||| | | |||||||| ||||   |||||||||||| ||||| |||||||||  |||||||||||||||||||||||||    
T  28917976 gacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 26508101 - 26508166
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtg 111  Q
    ||||||||||||||  |||||||||||| ||||| |||||||||  ||||||||||||||||||||    
T  26508101 tgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 750703 - 750607
Alignment:
Q  30 gacacgacacgtaca-ttgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcg 125  Q
    ||||||||||| ||| ||||||||  |||||  |||||||||||| || || |||||||||  || ||||||||||||||||||||||| |||||||    
T  750703 gacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcg 750607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 8587105 - 8587021
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||| |||||| ||| |||||||| ||||| |||| |||||||| ||||| ||||||||   |||||||||||||||||||||||    
T  8587105 gacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 8587021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 10954932 - 10955011
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||| |||||||| |||||  |||||||||||| ||||| |||||||||  |||||| ||||||||||||||||    
T  10954932 gacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcg 10955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 14832106 - 14832169
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcg 125  Q
    |||||||||||| ||||| |||||| || ||||||||||||||||| ||||||||| |||||||    
T  14832106 ctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcg 14832169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 49651838 - 49651783
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||||||||||||||    
T  49651838 ctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgt 49651783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 4987359 - 4987222
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggaca 145  Q
    |||||||| |||||  |||||||||||| ||||| |||||||||  ||||||||||||||| |||| ||||| ||| | | | |  | || |||| ||||    
T  4987359 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgaca 4987260  T
Q  146 cctgaacacgcctaatcggaggagtttccatgcttcat 183  Q
    || | |||||||||||| ||||||| ||| | ||||||    
T  4987259 ccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 55401053 - 55401134
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| ||| ||| |||| |||||  |||||||||||| ||||| ||||||||   |||||||||||||||||||||||    
T  55401053 acgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 55401134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 17568743 - 17568691
Alignment:
Q  54 tgacacctctaataatttgagaaaattacataattccatgtaattacaagtgt 106  Q
    |||||||  ||||||||||||||||||||||||||  ||||||||||||||||    
T  17568743 tgacaccattaataatttgagaaaattacataatttaatgtaattacaagtgt 17568691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 34307846 - 34307786
Alignment:
Q  48 acacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    ||||||||||||| |||||||||||||||||| ||||| |||  |||||||| ||||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 34910309 - 34910377
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    ||||||| |||||  |||||||||||| ||||| |||||||||  |||||||||||| |||||||||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgt 34910377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 14829681 - 14829751
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| |||||  |||||||||||| ||||| |||||||||   |||||||||||||||||||||||||    
T  14829681 tgacacgccgacacagctaataatttga-aaaatcacataattcatggtaattacaagtgtcggtgtcgtgt 14829751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 16000099 - 16000016
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||  ||| |||||||| |||||  |||||||||| | ||||| |||||||||  ||||| |||||||||||||||||    
T  16000099 acacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcg 16000016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 34185191 - 34185120
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| |||||  |||||||||| | ||||| ||| |||||  ||||||||||||||||||||||||||    
T  34185191 tgacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgt 34185120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 1509537 - 1509599
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||||  |||||||||||| ||||| ||||||||   ||||||||||||||||||||||||    
T  1509537 ctgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 1509599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 14209105 - 14209175
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||| |||||  |||||||||| | ||||| |||||||||  |||||||||||||||| |||||||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 14209175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 17005677 - 17005563
Alignment:
Q  56 acacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacg 155  Q
    ||||| |||||||||||| ||||| | |||||||  |||||||| |||||||||||| |||||||| ||  | |||| || |||| |||||| | ||||     
T  17005677 acaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacc 17005578  T
Q  156 cctaatcggaggagt 170  Q
     |||||| |||||||    
T  17005577 tctaatccgaggagt 17005563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 20503456 - 20503522
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    |||||||| |||||  | |||||||||| ||||| |||||||||  |||||||||||||||||||||    
T  20503456 tgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt 20503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 24205125 - 24205047
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    ||||||||||| ||| |||||||| |||||   ||||||||||||||||| ||||||| |  |||||||| ||||||||    
T  24205125 gacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 8789599 - 8789550
Alignment:
Q  65 ataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||||||| |||||||||| |||||||| | ||||||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcg 8789550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 11493441 - 11493376
Alignment:
Q  34 cgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||| |||||||||||  |||||| |||||||| ||||||||| |||||||||  ||||||||    
T  11493441 cgacacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaatta 11493376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 14216866 - 14216955
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgtt 118  Q
    |||||||||||| ||| |||||||  |||||  |||||||||| | || || | |||||||  |||||||||||||||| ||||||||||    
T  14216866 agacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgtt 14216955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 14222995 - 14223084
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgtt 118  Q
    |||||||||||| ||| |||||||  |||||  |||||||||| | || || | |||||||  |||||||||||||||| ||||||||||    
T  14222995 agacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgtt 14223084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 21257053 - 21256984
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtg 116  Q
    |||||| ||||||  |||||||||||| ||||| |||||||||  | ||||||||||||||||| |||||    
T  21257053 gacacgatgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgtg 21256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 51206414 - 51206353
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||  |||||||||||| ||||| |||||||||  ||||| |||||||||||||||||    
T  51206414 ctgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcg 51206353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 10335370 - 10335286
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| ||| | ||||| ||   ||||| |||||||||||||||||    
T  10335370 gacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcg 10335286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 21479109 - 21479177
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||  |||||||||||| ||||| ||| |||||  ||||||||| |||||||||||||    
T  21479109 tgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcg 21479177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 26492289 - 26492205
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| ||||   |||||||||||| ||||| | | |||||  ||||||||||||| |||||||||    
T  26492289 gacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcg 26492205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 7928450 - 7928509
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| |||||||||||| ||||| |||||||||  |||||||| | ||||||||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 25948939 - 25948884
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| |||||||||  |||||||| |||||| ||||||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgt 25948884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 40993326 - 40993275
Alignment:
Q  134 acatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
    ||||||| |||||| | |||||||||||| ||||||| ||||||||||||||    
T  40993326 acatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 2620137 - 2620079
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataatt 88  Q
    |||||||| || ||| |||||||| |||||| ||||| |||||||||||| ||||||||    
T  2620137 gacacgactcggacactgacacgccgacaccactaatcatttgagaaaatcacataatt 2620079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 12674586 - 12674536
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaat 79  Q
    |||||||||||| |||||||||| | |||||  ||||||||||||||||||    
T  12674586 agacacgacacggacattgacacaccgacactgctaataatttgagaaaat 12674536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 25064884 - 25064942
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataatt 88  Q
    ||||||||||  |||||||||||| |||||| ||||| |||||| ||||| ||||||||    
T  25064884 gacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatt 25064942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 35994821 - 35994744
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    ||||||||| | ||| ||||| || |||||  |||||||||||| ||||| |||||||||  |||||||||||||||||    
T  35994821 gacacgacatggacaatgacaagccgacacagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcg 35994744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 39756244 - 39756298
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||| | ||||| ||||||||  || ||||||||||||||||||||||||    
T  39756244 taataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcgtgt 39756298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 49179760 - 49179714
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    ||||||||| | ||||||||| ||||||| |||||||||||||||||    
T  49179760 tttgagaaagtgacataattcgatgtaatcacaagtgtcggtgtcgt 49179714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 52369783 - 52369817
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaat 97  Q
    ||||||||||||||||||||||||||| |||||||    
T  52369783 taataatttgagaaaattacataattcaatgtaat 52369817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 5441115 - 5441046
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||||||  ||| |||||||| | |||| |||| ||||||||||||| ||||||||| ||| |||||    
T  5441115 gacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcacataattcaatggaatta 5441046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 9624648 - 9624685
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaatta 99  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  9624648 ctaataatttgagaaaatcacataattcaatgtaatta 9624685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 12083910 - 12083955
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtc 107  Q
    ||||||| ||||||||| ||||||||||  ||||||||||||||||    
T  12083910 ctaataaattgagaaaactacataattcagtgtaattacaagtgtc 12083955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 20503533 - 20503586
Alignment:
Q  134 acatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatagat 187  Q
    ||||||| |||||| | |||||||||||| ||||||| ||| ||||||||||||    
T  20503533 acatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagat 20503586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 25775499 - 25775568
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaa-aattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||  |||| | ||||||||||| || ||| |||||||||  |||||||||||||||||||||||    
T  25775499 tgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcg 25775568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 3618879 - 3618915
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattc 89  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  3618879 ctgacaccgctaataatttgagaaaattccataattc 3618915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 5407314 - 5407262
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||| |||||| |||| ||||||||||||| |||||||||  ||||||||    
T  5407314 gacacgccgacaccgctaaaaatttgagaaaatcacataattcattgtaatta 5407262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 10268567 - 10268487
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||| | ||| |||||||| |||||   ||||||||||| ||||| ||||||||   |||||||||||||||| |||||    
T  10268567 acgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtc 10268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 12703999 - 12704051
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||| |||||| |||||||||||||||||  |||||||||  ||||||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacataattcagtgtaatta 12704051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 14618755 - 14618815
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattc 89  Q
    ||||||||||||  || ||| ||||||||||| |||||||||| ||||||  |||||||||    
T  14618755 agacacgacacgggcactgagacgctgacacccctaataatttaagaaaaccacataattc 14618815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 24633741 - 24633800
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattc 89  Q
    ||||| |||||| |||| |||| || |||||| |||||||||||||||||| |||||||||    
T  24633741 agacatgacacggacat-gacatgccgacaccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 32804622 - 32804566
Alignment:
Q  32 cacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataatt 88  Q
    |||||||||  |||||||| || ||||||  ||||||||||||||||| ||||||||    
T  32804622 cacgacacgggcattgacatgccgacaccgttaataatttgagaaaatcacataatt 32804566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 44427855 - 44427903
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  44427855 tttgagaaaatgacataatccaatgtaatcacatgtgtcggtgtcgtgt 44427903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 27945016 - 27945103
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  27945016 gacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgt 27945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 187
Target Start/End: Original strand, 24339617 - 24339774
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||| | |||||||||||| |||||  |||||||||||| ||||| |||||||||  |||||||||||||||||||||||||| ||| ||| | |    
T  24339617 gacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 24339716  T
Q  130 taatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatagat 187  Q
      | || | || |||||| | |||||||||||| |||||||  || ||||||||||||    
T  24339717 cgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatagat 24339774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 28155563 - 28155629
Alignment:
Q  48 acacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| |||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcg 28155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 21880159 - 21880211
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21880159 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 21880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 13770666 - 13770753
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| ||| |||| |||||  |||||||||| | |||||||||||||||  ||||||||||||||||| ||||||||    
T  13770666 gacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgt 13770753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 1433430 - 1433516
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||| |||||||||||| ||||||  ||||||||||||||||| |||| |||   |||||||| | |||||||||||||||    
T  1433430 acacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgt 1433516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 19206024 - 19206157
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaag 128  Q
    |||||||||||| |||   |||||| |||||| |||||||||||||||||| |||||||||  | |||||| | ||||||||||| ||||||| ||  ||    
T  19206024 agacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtcttgttggtgtcagag 19206123  T
Q  129 ataatacatgtcggacacctgaacacgcctaatc 162  Q
    || | |||| || |||||| ||| ||| ||||||    
T  19206124 atgacacatatctgacaccggaatacggctaatc 19206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 5409917 - 5409833
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||| | ||| ||||||||||| ||  |||||||||||| ||||| |||||||||  || |||||||||||||||||||||||    
T  5409917 acgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgt 5409833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 24105653 - 24105737
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| |||||| ||| ||||  |||||||||||||||||| ||||    
T  24105653 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcg 24105737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 3520414 - 3520335
Alignment:
Q  42 acattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    |||||||||||||||||||  |||| |||||||||||| | ||||||| ||||||||| | ||||||||| | |||||||    
T  3520414 acattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcggtgacatgttggt 3520335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 7438714 - 7438764
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||||||||    
T  7438714 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 12843225 - 12843172
Alignment:
Q  64 aataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||| |||||||||    
T  12843225 aataatttgataaaattacataattcaatgtaattacatgtgtcagtgtcgtgt 12843172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 26733278 - 26733363
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||| |||||||  |||||| |||||||||||| ||||| |||||||||  | |||||| | ||||||||||||    
T  26733278 agacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcg 26733363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 30731011 - 30731101
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||||||||| |||| || ||||| |||||| | |||||||||||||||| |||||||||  |||||||    |||||||||||||||||||    
T  30731011 agacacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaatt--gtgtgtcggtgtcgtgttggt 30731101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 1885587 - 1885639
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  1885587 tttgaaaaaatgacataattcaatgtaatcacaagtgtcggtgtcgtgttggt 1885639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 7197369 - 7197297
Alignment:
Q  42 acattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| |||||  |||||||||| | ||||| |  |||||| ||||||||||||||||||||||||    
T  7197369 acattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcg 7197297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 25481893 - 25481961
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||  |||||||||||| ||||| |||||||||  ||||||||||||||| |||||||    
T  25481893 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcg 25481961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 6630980 - 6630905
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    |||||||| |||||| |||||||||||||||| | || ||||||  |||||||| | |||||| ||||||||||||    
T  6630980 tgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggt 6630905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 11665510 - 11665427
Alignment:
Q  44 attgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaa 127  Q
    ||||||||||||||||  |||||||||||| ||||| |||||||||  | |||||| |||||||| |||| ||| ||| |||||    
T  11665510 attgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaa 11665427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 11722182 - 11722123
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattc 89  Q
    ||||||||||| ||| |||||||| |||||| |||| ||||||||||||| |||||||||    
T  11722182 gacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattc 11722123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 20549771 - 20549850
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||| |||| |||||| | |||||| |||||||||||||||||| || ||||||  |||||||| | ||||||||||||    
T  20549771 gacacatacactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 26033513 - 26033458
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||||||| ||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgt 26033458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 29787447 - 29787384
Alignment:
Q  36 acacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    ||||| ||||| |||||| |||||| |||||||||||||||||| |||||||||  ||||||||    
T  29787447 acacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 32308111 - 32308182
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| |||||| |||||||||||||||||| |||||||||  |||||||  | ||||| |||||||||    
T  32308111 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgt 32308182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 43027553 - 43027466
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| |||||||  ||| |  |||||||||||| ||||| ||||||| |  ||||| ||||||||||||||||||||    
T  43027553 gacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgt 43027466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 3991331 - 3991384
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||||||||| ||||| |||||||||  | ||||||||||||||||||||||    
T  3991331 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 19992008 - 19992061
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||||||||||||||| ||||| |||  |||||||| |||||||||||||||    
T  19992008 ctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 19992061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 1401007 - 1401083
Alignment:
Q  37 cacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||| ||| ||||||||||| | | |||||||||||||||| | |||||||||  |||||||| |||| ||||||||    
T  1401007 cacggacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaattataagtatcggtgtc 1401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 4008632 - 4008580
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaatt 98  Q
    |||||||| ||||||| ||||||||||| |||||||||| |||| ||||||||    
T  4008632 tgacacgcagacacctttaataatttgataaaattacatgattcaatgtaatt 4008580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 4014024 - 4013972
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaatt 98  Q
    |||||||| ||||||| ||||||||||| |||||||||| |||| ||||||||    
T  4014024 tgacacgcagacacctttaataatttgataaaattacatgattcaatgtaatt 4013972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 9408385 - 9408333
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    ||||||||||| ||||| ||||||||   ||||||||||||||||||||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 9408333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 9778510 - 9778562
Alignment:
Q  65 ataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||| ||||| |||||||||  | ||||||||||||||||||||||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgt 9778562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 11061157 - 11061077
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||| ||| |||||| | |||||  |||||||||||| ||||| ||||||||   | ||||||||||||||||||||    
T  11061157 acgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 18013155 - 18013071
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| ||| |||||  |||||||  |||||||||| | |||||||||||||||  |||||||| | ||||| |||||||||    
T  18013155 acgacacggacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgt 18013071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 23128728 - 23128648
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaa 127  Q
    ||||||||||||||  ||||||||||||||||  | |||||||  |||||| | | |||||||||| |||||||| |||||    
T  23128728 gacacgctgacaccaataataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgttggtgtcgaa 23128648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 30813819 - 30813863
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgt 106  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||    
T  30813819 ctaataatttgagaaaattacataattcagtgtaattacaggtgt 30813863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 5307234 - 5307293
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataatt 88  Q
    |||||||| ||  |||||||||||| |||||| || ||||||||||||||| ||||||||    
T  5307234 agacacgatacagacattgacacgccgacaccacttataatttgagaaaatcacataatt 5307293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 5835242 - 5835305
Alignment:
Q  50 acgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||| |||||| |||||| ||||||||||| |||||||||  |||||||| | |||||||||||    
T  5835242 acgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 7328743 - 7328688
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||||||||| ||||||||   |||||||| | |||||||||||||||    
T  7328743 ctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgt 7328688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 7758317 - 7758384
Alignment:
Q  50 acgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| |||||||||| ||||||||| |||||||  | ||||||   |||||||||||||||    
T  7758317 acgctgacaccactaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgt 7758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 10547213 - 10547174
Alignment:
Q  70 ttgagaaaattacataattccatgtaattacaagtgtcgg 109  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  10547213 ttgagaaaattacataattcaatgtaattacatgtgtcgg 10547174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 15902797 - 15902892
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcg 125  Q
    ||||||||||  ||| ||||| || ||||||  ||||||||||| ||||| ||||||||   |||||||| | |||||||||| |||| |||||||    
T  15902797 gacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcg 15902892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 18039006 - 18039061
Alignment:
Q  63 taataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| |||| | |||||||||  ||||||||||||||||||||||||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 18039061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 18215238 - 18215183
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| ||||||| |  |||| |||||||||||||||||||||    
T  18215238 ctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgt 18215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 21560523 - 21560610
Alignment:
Q  75 aaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcctaatc 162  Q
    ||||| |||||||||  |||||||||||||||||||||||| | ||| || || |  |||||||||  |||||  |||||||||||||    
T  21560523 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtcaaacacgatacatgtctaacaccgaaacacgcctaatc 21560610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 22484016 - 22484083
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||| |||||| |||||||||| |||||||| ||||||||  | |||||| | |||||||||||    
T  22484016 tgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtc 22484083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 22602778 - 22602707
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| ||||||   ||| |||||||||||| |||||||||  |||||||| | |||||||||||||||    
T  22602778 tgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 25822642 - 25822725
Alignment:
Q  42 acattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcg 125  Q
    |||| ||||||| |||||  |||||||||||| ||||   || |||||  |||||||||||||||||||||||| | |||||||    
T  25822642 acatagacacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcggtatcg 25822725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 35861957 - 35862024
Alignment:
Q  48 acacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||| |||||  |||||||||||| ||||| ||||||||| ||||||||  ||||||| |||||||    
T  35861957 acacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 42720958 - 42720891
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||||| ||||||| |||||||||||| ||||| ||||||||  ||||||||| | ||||| |||||    
T  42720958 tgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtc 42720891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 6028633 - 6028687
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| || || ||||||||  |||||||||||| ||||||||||||||    
T  6028633 taataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgt 6028687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 8160414 - 8160488
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaa 127  Q
    |||||||| |||||||||| ||||||||||||||||   |||||||| | |||| ||| |||||| ||| |||||    
T  8160414 ctgacaccgctaataatttaagaaaattacataatttagtgtaattatatgtgttggtatcgtgtcggtgtcgaa 8160488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 29999020 - 29998974
Alignment:
Q  137 tgtcggacacctgaacacgcctaatcggaggagtttccatgcttcat 183  Q
    |||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  29999020 tgtccgacacctaaacacgtctaatcggaggagtgtccatgcttcat 29998974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 35297723 - 35297649
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacat 137  Q
    ||||||||||||||||| |||||||||  | |||||| | |||| |||||||||||| | ||||| |||| ||||    
T  35297723 taataatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgttgatgtcgaacataacacat 35297649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 43249968 - 43250046
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    |||| |||||| ||| |||||||| |||||   ||||||||||||||||| ||||||| |  |||||||| ||||||||    
T  43249968 gacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 44172941 - 44172883
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||||||||||||||| ||||||||| ||||||| ||| ||||  |||| ||||||||    
T  44172941 taataatttgagaaaatgacataattcaatgtaatcacatgtgtttgtgttgtgttggt 44172883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 5937466 - 5937421
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||||||||| ||||||| ||||||||| ||||||    
T  5937466 tttgagaaaatgacataattcaatgtaatcacaagtgtctgtgtcg 5937421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 11700798 - 11700847
Alignment:
Q  50 acgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    |||||||||||  ||||||||||| ||||| ||||||||| |||||||||    
T  11700798 acgctgacaccgttaataatttgacaaaatcacataattcaatgtaatta 11700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 24289813 - 24289854
Alignment:
Q  48 acacgctgacacctctaataatttgagaaaattacataattc 89  Q
    |||||| |||||| | ||||||||||||||||||||||||||    
T  24289813 acacgccgacaccgccaataatttgagaaaattacataattc 24289854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 43243092 - 43243149
Alignment:
Q  70 ttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaa 127  Q
    ||||| |||| ||||||||  |||||||||||||||||| ||||||||| || |||||    
T  43243092 ttgaggaaataacataatttaatgtaattacaagtgtcgatgtcgtgtttgtgtcgaa 43243149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 598182 - 598266
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||| |||||| ||| ||||||   |||||| |||||||||| ||||||| || |||||  ||||||||  |||||||||||||    
T  598182 agacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtc 598266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 4909150 - 4909210
Alignment:
Q  54 tgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||  |||||||||||||||||||||||||||  |||||| | | ||||| ||||||    
T  4909150 tgacaccaataataatttgagaaaattacataattcattgtaatcatatgtgtcagtgtcg 4909210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 8234153 - 8234205
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||| |||||||||  |||| ||||||||| ||||||||    
T  8234153 ctaataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcg 8234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 10042915 - 10042999
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| ||| | |||||| |||||| |||||||||||| ||| | ||||||||    ||||||| ||||||| |||||||||    
T  10042915 acgacacggacacttacacgccgacaccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcgtgt 10042999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 10230072 - 10230024
Alignment:
Q  137 tgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
    ||||||||||| |||||||||| |||  |||||||||| ||||||||||    
T  10230072 tgtcggacaccagaacacgcctgatccaaggagtttccgtgcttcatag 10230024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 25956464 - 25956504
Alignment:
Q  74 gaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||||||||| ||||||| ||||||||||||||||    
T  25956464 gaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 25956504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 32094073 - 32094017
Alignment:
Q  62 ctaataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| |||| | |||||||||  ||||||||||| ||||||||||||||    
T  32094073 ctaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgt 32094017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 38134466 - 38134410
Alignment:
Q  54 tgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggt 110  Q
    |||||||  ||||||||||||||||| ||||||||| ||||||| | | ||||||||    
T  38134466 tgacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 48438560 - 48438604
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 49107796 - 49107883
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgtt 118  Q
    ||||||||||| ||  |||||| | |||||| |||||||||||||||||  ||||||||   ||| |||| | ||||||||||||||||    
T  49107796 gacacgacacggactctgacacaccgacaccgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcggtgtcgtgtt 49107883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 8365604 - 8365448
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaag 128  Q
    |||||||||||| ||| |||||||| |||||  |||||||||||| || || |||||||||  |||||||||||||||||||||||||| ||||||| |     
T  8365604 agacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggac 8365505  T
Q  129 ataatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
    |  | || |||| |||||  | |||||||||||| ||||||| ||| ||||||||||    
T  8365504 acgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 16766672 - 16766827
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||| | ||| |||||||| |||||  |||||||||||| ||||| |||||||||  |||||||||||||||||||||||||| ||| ||| | |    
T  16766672 gacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 16766771  T
Q  130 taatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
     || || |||| |||||| | |||||||||||| || || | ||| ||||||||||    
T  16766772 caacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 9027153 - 9027240
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| |||||||| |||||| |||||||||||||| ||| |||||||||| |||||||| | |||||||||||||||    
T  9027153 gacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgt 9027240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 12696299 - 12696386
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| |||||||||||||||  |||||||||||||||| |||||||||    
T  12696299 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgt 12696386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 9629358 - 9629442
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| | |||||||||| |||||| | |||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  9629358 gacacgacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 34595109 - 34595193
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  34595109 gacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 34595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 187
Target Start/End: Complemental strand, 9107454 - 9107297
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||||| ||| | |||||| |||||  |||||||||||| ||||| ||| |||||  |||||||||||||||||||||||||| ||| ||| | |    
T  9107454 gacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 9107355  T
Q  130 taatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatagat 187  Q
     ||    |||| |||||| | |||| ||||||| |||||||  || ||||||||||||    
T  9107354 caacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatagat 9107297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 426598 - 426514
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||   ||||||||||| ||||| ||||||||  ||||||||||||||||||||||||    
T  426598 gacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcg 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 6898349 - 6898281
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||||| |||||||||||||  |||||||||||||   |||||||||||||||||||||||    
T  6898349 tgacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcg 6898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 7977898 - 7977830
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||  |||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  7977898 tgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 7977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 10770758 - 10770671
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||| | ||| ||||||||  ||||  |||||||||||| ||||| |||||||||  ||||||||||||||||||||||||||    
T  10770758 gacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 10770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 20371189 - 20371110
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| |||||||||||| |||||| |||||||||||||||||| |||||| || |||| |||| | ||||||||||||    
T  20371189 gacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcg 20371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 9658836 - 9658936
Alignment:
Q  9 agcacagatacagacactctagacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    ||||| |||||||||||   |||||||||||| ||| |||||||| |||||| |||||||||| ||||||| |||||||||  |||||||| |  |||||    
T  9658836 agcacggatacagacac---agacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcg 9658932  T
Q  109 gtgt 112  Q
    ||||    
T  9658933 gtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 8777057 - 8776973
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| ||||| ||| |||||  ||||||||||||||| |||||||    
T  8777057 gacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcg 8776973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 10339210 - 10339054
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgt-aattacaagtgtcggtgtcgtgttggtatcgaag 128  Q
    ||||||||| | ||| |||||||| |||||| | | |||||||||||||| |||||||||  ||| ||||| | ||||| ||| ||||| ||| ||| |     
T  10339210 gacacgacatgaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggac 10339111  T
Q  129 ataatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
    |  | ||||||| |||||  | |||||||||||||||||||| ||| ||||||||||    
T  10339110 acgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 15489784 - 15489733
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  15489784 ctaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 17302536 - 17302619
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||| ||| ||||||||||||||  |||||||||||| |||| | ||||||||| |||||||||||||||||  ||||||||    
T  17302536 gacacgaacactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtcgtgt 17302619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 25038139 - 25038064
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||||| |||||||  ||||||||||||||||||||||||||   ||||||||||| ||||||| | ||||||||    
T  25038139 tgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggt 25038064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 16833283 - 16833365
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    ||||||||||  ||| |||||||| |||||  |||||||||||| ||||| ||||| |||  |||||||||||||||||||||    
T  16833283 gacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 21395374 - 21395305
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||  ||||| |||||||||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  21395374 gacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgt 21395305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 3398595 - 3398683
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttgg 120  Q
    |||||||||| ||| |||||||| |||||  |||||||||||| ||||| | |||||||  |||||||| |||| |||||||||||||||    
T  3398595 acacgacacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattataagtatcggtgtcgtgttgg 3398683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 28715293 - 28715354
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||  |||||||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  28715293 ctgacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 28715354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 7265661 - 7265593
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||  ||||| |||||||||||||||||| |||||||||  |||||||| | ||||||||||||    
T  7265661 tgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 9617442 - 9617494
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    ||||||||||||||||| ||||||||| ||||||||| | |||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgt 9617494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 19040343 - 19040411
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||| |||||||||||||||||| |||||||||  |||||||| | ||||| ||||||    
T  19040343 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 19369831 - 19369879
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  19369831 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgtgt 19369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 7377979 - 7378038
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| |||| ||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 7378038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 9025546 - 9025491
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||||||||| |||||||||  |||||||| | |||||||||||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 10294082 - 10294173
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||||||||| | | ||||| || || ||| |||||||||||||| |||  |||| ||| ||||||||| | |||||||||||||||||||    
T  10294082 gacacgacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggt 10294173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 17841668 - 17841589
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||| |||||||| |||||  |||||||||||| ||||| ||||||||   |||||||||||||| ||||||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcg 17841589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 28152079 - 28152157
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||| |||||||| ||||   |||||||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcg 28152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 31384927 - 31384982
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| |||||||||  |||||||||||||||| |||||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 31384982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 2117076 - 2117137
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||||||||||| ||||| ||||||||| ||| ||||| ||||||| |||||||||    
T  2117076 gacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtc-gtgtcgtgt 2117137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 7801222 - 7801156
Alignment:
Q  48 acacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| |||||  |||||||||||| ||||| |||||||||   ||||||||||||||||||||||    
T  7801222 acacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 7801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 13851712 - 13851794
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||||| ||| |||||||  |||||| |||||||||||||||||| || ||||||  |||||||| | |||||| ||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 13851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 1681734 - 1681811
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    ||||||||| |||| | |||||| |||||  |||||||||||| ||||| || ||||||  |||||||||||||||||    
T  1681734 acacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 6751927 - 6751882
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  6751927 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 6751882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 30866202 - 30866149
Alignment:
Q  56 acacctctaataatttgagaaaattacataattccatgtaattacaagtgtcgg 109  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||| | |||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 853943 - 853859
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| |   |||||||| |||||  |||||||||||| ||||| ||||||||   || ||||||||||||||||||||    
T  853943 gacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcg 853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 5732594 - 5732510
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||| | ||| |||||||| ||||||  ||||||||||||||||| ||||| ||   |||||||| | ||||||||||||    
T  5732594 gacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcg 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 187
Target Start/End: Complemental strand, 5970159 - 5970035
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcctaatc 162  Q
    ||||||||||| ||||| |||||||||  ||||||||||| ||| |||||||||| ||| ||| | |  | |||| || |||| | | ||||||| ||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatc 5970060  T
Q  163 ggaggagtttccatgcttcatagat 187  Q
     |||||||  | |||||||||||||    
T  5970059 cgaggagtgactatgcttcatagat 5970035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 9522897 - 9522953
Alignment:
Q  61 tctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| | ||||| |||||||||  ||||||||||||||||||||| ||||    
T  9522897 tctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgt 9522953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 26562681 - 26562761
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaa 127  Q
    ||||||| |||||  |||| ||||||||||||| |||||||||  |||||||| | |||||| |||||||| ||| |||||    
T  26562681 gacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaa 26562761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 33001357 - 33001289
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||  |||||||||||| ||||| ||||||||  ||||||||| | ||||||||||||    
T  33001357 tgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 1315937 - 1315991
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| |||||| |||||||||||||||||     ||||||||||||||||||||||||    
T  1315937 gacaccgctaatagtttgagaaaattacata-----atgtaattacaagtgtcggtgtcg 1315991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 7938091 - 7938174
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||||||| | ||| |||||||| |||||  |||||||||||| ||||| | ||||||   |||||||| |||||||||||||    
T  7938091 gacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 9195806 - 9195751
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||||||||| ||||||||   |||||||| | |||||||||||||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgt 9195751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 17341746 - 17341671
Alignment:
Q  32 cacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtc 107  Q
    |||||||||  || |||||||| ||||||  ||||||||||| ||||| |||||||||  |||||||| |||||||    
T  17341746 cacgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 31959134 - 31959213
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcgg 109  Q
    |||| |||||| ||| |||||||| | |||  |||||||||||| ||||| ||||||| |  ||||||||||||||||||    
T  31959134 gacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 32320733 - 32320666
Alignment:
Q  50 acgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||  ||||||||||| ||||| ||||||||| |||| |||| | || ||||||||||||    
T  32320733 acgctgacaccgttaataatttgataaaatcacataattcaatgtcattatatgtatcggtgtcgtgt 32320666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 34073431 - 34073344
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| ||||| ||  ||| | ||||||||||||||||||  ||||||||  |||||||| | | |||||||||||||    
T  34073431 gacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgt 34073344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 785488 - 785422
Alignment:
Q  81 acataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacc 147  Q
    ||||||||| ||||||| ||||||||||||||||||| ||| ||||| || ||   |||||||||||    
T  785488 acataattcaatgtaatcacaagtgtcggtgtcgtgtcggtgtcgaacatgatgtgtgtcggacacc 785422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 29049893 - 29049927
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaat 97  Q
    ||||||||||||||||||||||||||| |||||||    
T  29049893 taataatttgagaaaattacataattcaatgtaat 29049927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 5569825 - 5569866
Alignment:
Q  142 gacacctgaacacgcctaatcggaggagtttccatgcttcat 183  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||    
T  5569825 gacacctgaacacgcctaatctgaggagtgtccgtgcttcat 5569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 7973665 - 7973725
Alignment:
Q  66 taatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaa 127  Q
    |||||| | ||||||||||||||   |||||||| |||||||||||||||| ||||||||||    
T  7973665 taatttaaaaaaattacataattaagtgtaattataagtgtcggtgtcgtg-tggtatcgaa 7973725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 9911566 - 9911525
Alignment:
Q  76 aaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||| |||||||||  ||||||||||||||||||||||||||    
T  9911566 aaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 9911525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 32299283 - 32299332
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    ||||||||||||||||| ||||||||| ||||| ||| | ||||||||||    
T  32299283 taataatttgagaaaatcacataattcaatgtagttatacgtgtcggtgt 32299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 6349788 - 6349732
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttg 119  Q
    ||||||||||| |||||||||||||||  |||||||||| |||| | || |||||||    
T  6349788 taataatttgaaaaaattacataattcattgtaattacatgtgttgatgccgtgttg 6349732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 7151413 - 7151473
Alignment:
Q  56 acacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtg 116  Q
    |||||||||||||||||| ||||| ||||||||   |||||||| | |||| |||||||||    
T  7151413 acacctctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgtg 7151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 7569219 - 7569183
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaatta 99  Q
    |||||||||||||||||||||||||||  ||||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaatta 7569183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 9024225 - 9024173
Alignment:
Q  65 ataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||||||| ||||||||| ||||||| | | ||||| |||||||||    
T  9024225 ataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgtgt 9024173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 10157995 - 10158039
Alignment:
Q  66 taatttgagaaaattacataattccatgtaattacaagtgtcggt 110  Q
    |||||||||||||| ||||||||| ||||||| ||| ||||||||    
T  10157995 taatttgagaaaatgacataattcaatgtaatcacatgtgtcggt 10158039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 17435206 - 17435250
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgt 106  Q
    |||||||||| | |||||||||||||||  |||||||||||||||    
T  17435206 ctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 19044442 - 19044522
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||| | ||| |||||||| |||||  ||||||||||||||| || |||||||||  ||| |||| | |||||||||||    
T  19044442 acgacatggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 92798 - 92940
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgtt----ggtatcgaagataatacatgtcg 141  Q
    |||||||| |||||| ||||||||||||||||||||||||||||  |||||||||||||||| || | |||||    ||| ||| | |  | ||||||||    
T  92798 tgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtcagttttgtgttggtgggtgtcggacacgacacatgtcg 92897  T
Q  142 gacacctgaacacgcctaatcggaggagtttccatgcttcata 184  Q
    |||||||| |||||||||||| ||||||| ||| |||||||||    
T  92898 gacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 22651951 - 22652106
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| ||||| ||||||||| || |||||||||||||||||||||||| ||| ||| | |    
T  22651951 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggaca 22652050  T
Q  130 taatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
      | |  |||| |||||| | ||||| |||||| ||||||| ||| ||||||||||    
T  22652051 cgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 24669408 - 24669492
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||  ||| |||||||||||||||  |||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  24669408 gacacgacacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 25566839 - 25566907
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    |||||||  |||||||||||| ||||| |||||||||  ||||||||||||||||||||||||||||||    
T  25566839 ctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggt 25566907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 185
Target Start/End: Complemental strand, 29510388 - 29510233
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| ||||| ||| |||||  | ||||||||||||||||||| |||| ||| ||| | |    
T  29510388 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggaca 29510289  T
Q  130 taatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
      |  | |||| |||||| | |||| ||||||| ||||||| ||| ||||||||||    
T  29510288 cgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 18170564 - 18170482
Alignment:
Q  32 cacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||| ||| |||||||| |||||   ||| ||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  18170564 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 18634132 - 18634050
Alignment:
Q  32 cacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||| ||| |||||||| |||||   ||| ||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  18634132 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcg 18634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 29447162 - 29447040
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcctaat 161  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||| ||| ||| ||| | |  | |  |||| |||||| | |||||||||||    
T  29447162 ctaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaat 29447063  T
Q  162 cggaggagtttccatgcttcata 184  Q
    |  |||||| ||| |||||||||    
T  29447062 cctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 15816197 - 15816122
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    |||||||| |||||  |||||||||||| ||||| ||||||||   |||||||| |||||||||||||||||||||    
T  15816197 tgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggt 15816122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 27067357 - 27067297
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||| ||||| ||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  27067357 gacaccactaatgatttgagaaaattacataattc--tgtaattacaagtgtcagtgtcgtgt 27067297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 10497861 - 10497772
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcct 158  Q
    ||||||||||| ||||||||  ||||||| ||||||||| || |||||| ||| ||||| ||||||||||||  ||||| | ||||||||    
T  10497861 tttgagaaaataacataatttgatgtaatcacaagtgtcagtatcgtgtcggtgtcgaacataatacatgtcaaacaccgggacacgcct 10497772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 4948659 - 4948711
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 4948711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 13437032 - 13436952
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcga 126  Q
    |||||||| |||||  |||||||||||| ||||| |||||||||   ||||| ||||||||||||||||||| ||| ||||    
T  13437032 tgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtcga 13436952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 20873044 - 20873128
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| ||||    ||||||||||| ||||| ||||||||   |||||||||||||||||||||||    
T  20873044 gacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 20873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 31236644 - 31236580
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtg 111  Q
    ||||||| |||||  |||||||||||||||||| ||||||||| ||||||||| | |||||||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 40332200 - 40332248
Alignment:
Q  64 aataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 2572140 - 2572053
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| | |  ||||||  |||||  |||||||||||| ||||| ||||||||   ||||||||||||||||||||||||||    
T  2572140 gacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgt 2572053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 21465419 - 21465474
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| | ||||||| |||||||||||||||| ||||||||||    
T  21465419 ctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgt 21465474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 36450833 - 36450754
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||| |||||||| |||||  |||||||||||| ||||| ||| |||||  ||||||||||||||| |||||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcg 36450754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 4298937 - 4298887
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  4298937 taataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 7658458 - 7658520
Alignment:
Q  50 acgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    |||| |||||| ||||||||||||||||||||||||||||  |||||||| |  |||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 11927137 - 11927079
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||||||||| ||||| |||||||||  |||||||| | |||||||||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggt 11927079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 20679454 - 20679396
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||| |||||||||||||||||| ||||| |||  |||||||| |||||||||||||    
T  20679454 gacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 8342979 - 8343032
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||||||||| ||||| ||||||||   ||||||||||||||||||||||||    
T  8342979 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 25172760 - 25172695
Alignment:
Q  52 gctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||  |||||||||||| ||||||||||| ||  ||||||||| | |||||||||||||||    
T  25172760 gctgacactgctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgt 25172695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 926872 - 926788
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| ||||||||  ||||  ||||||||||||||||||  |||  |||  |||||||| ||||||||||||||    
T  926872 gacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcg 926788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 4786406 - 4786338
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| ||||||  ||||||||| ||||||| |||||||||  |||||||| | ||||||||||||    
T  4786406 tgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 7442846 - 7442902
Alignment:
Q  56 acacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    ||||| |||||||||| | |||||||||||||||  ||||||||||||||| |||||    
T  7442846 acaccgctaataatttcataaaattacataattcagtgtaattacaagtgttggtgt 7442902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 22595985 - 22596053
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||  |||||||||| | ||||| |||||||||  ||||||||||||||| |||||||    
T  22595985 tgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcg 22596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 12606881 - 12606830
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||||||||||||| | ||||||| ||||||||| | |||||||||||    
T  12606881 ctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 12985392 - 12985451
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||| | |  |||||||||||    
T  12985392 gacacctataataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcg 12985451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 13844663 - 13844596
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||| |||||  |||||||||||||||||| ||||||||   |||||||| | ||||||||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 34897085 - 34897144
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| |||||||||||||||||| |||||||||  |||||||| | |||||| |||||    
T  34897085 gacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 34897144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 4611534 - 4611604
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcg 125  Q
    |||||| |||||||||||||||||| |||||||||  |||||||| | || ||||||  |||| |||||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtgctgtgtcggtatcg 4611604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 24362269 - 24362199
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||| |||||| |||||||||||||| ||| |||||||||  |||||||| | |||||  ||||||||    
T  24362269 gacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgt 24362199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 24413645 - 24413559
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataa-tttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||| |||||  ||||||||  |||||| |||||||||| ||||||||||   ||||||| ||||||| ||||||    
T  24413645 agacacgacacggacactgacatactgacaccgttaataattttgagaaaaatacataattcagggtaattataagtgtcagtgtcg 24413559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 26434187 - 26434237
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    |||||| ||||||||||| ||||||||| || |||||| ||||||||||||    
T  26434187 ctaatagtttgagaaaatcacataattcaatataattaaaagtgtcggtgt 26434237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 27101502 - 27101548
Alignment:
Q  42 acattgacacgctgacacctctaataatttgagaaaattacataatt 88  Q
    |||||||||||| |||||| |||||||||||| ||||| ||||||||    
T  27101502 acattgacacgccgacaccgctaataatttgaaaaaatcacataatt 27101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 8343323 - 8343376
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||||||||| ||||| ||||||||   |||||||||||||||| |||||||    
T  8343323 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgt 8343376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 13203648 - 13203685
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaatta 13203685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 25192431 - 25192350
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtg 111  Q
    ||||||| ||| ||| |||||||| |||||  |||||||||||| ||| | |||||||||  | |||||| |||||||||||    
T  25192431 gacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtg 25192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 39954346 - 39954305
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataatt 88  Q
    ||||||| |||||| |||||||||||||||||| ||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatcacataatt 39954305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 3025558 - 3025610
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||||||||| |||||||||  |||||||| | ||||| ||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 11944673 - 11944729
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttg 119  Q
    ||||||||||| ||||| |||||| ||  |||||||| | |||||||||||||||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttg 11944729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 24613528 - 24613579
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||| ||||||||   |||||||||||||||||||||||    
T  24613528 ctaataatttga-aaaatcacataattaagtgtaattacaagtgtcggtgtcg 24613579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 30077439 - 30077387
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| || || |||||||||  |||||||||||||||| ||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcg 30077387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 34201097 - 34201061
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  34201097 taataatttgagaaaatgacataattcaatgtaatta 34201061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 187
Target Start/End: Original strand, 241569 - 241726
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||  ||||| ||||||||   ||||||||  |||||||||||||||||||| ||| | |    
T  241569 gacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggaca 241668  T
Q  130 taatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatagat 187  Q
      | || |||| |||||| | |||||||||||| ||| ||| ||| ||||||||||||    
T  241669 cgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagat 241726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 6247597 - 6247681
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||| ||| ||| |||||||| ||||| ||||||||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  6247597 gacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 6247681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 6326381 - 6326304
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtc 107  Q
    ||||||||||| ||| |||||||| |||| | ||| ||||||||||||||||||||||||  ||||||||||||||||    
T  6326381 gacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 21191140 - 21191056
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| ||||| || |||||  |||||||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  21191140 gacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 32630807 - 32630735
Alignment:
Q  42 acattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||| | ||||| ||||||    
T  32630807 acattgacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcg 32630735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 21522725 - 21522812
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| |||||||| |||||  |||||||||| | ||||| |||||||||  ||||||||||| ||||||||||||||    
T  21522725 gacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgt 21522812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 21533291 - 21533378
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| |||||||| |||||  |||||||||| | ||||| |||||||||  ||||||||||| ||||||||||||||    
T  21533291 gacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgt 21533378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 31084314 - 31084385
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| |||||  |||||||||||| ||||| ||||||||| |||||||||||||||||| ||||||||    
T  31084314 tgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgt 31084385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 39698532 - 39698603
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||||||  |||||||||||| ||||| |||||||||  |||||||||||||||| |||||||||    
T  39698532 tgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 39698603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 8420034 - 8420086
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  8420034 ctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcg 8420086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 21542004 - 21542092
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||  ||||||||| || |||||  |||||||||| | || || |||||||||  ||||||||||||||||||||||||||    
T  21542004 agacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgt 21542092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 28588746 - 28588674
Alignment:
Q  42 acattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||||  ||||||||||||||||| |||||||||  |||||||| | ||||||||||||    
T  28588746 acattgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcg 28588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 22423895 - 22423809
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||| | | |||||| |||||||  |||||||||||||||||| ||||||||| || |||||| |  ||||||||||||||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgt 22423809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 36838544 - 36838606
Alignment:
Q  56 acacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgtt 118  Q
    ||||| |||||||||||||||||||||||||||   |||||||| | ||||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 19579682 - 19579763
Alignment:
Q  36 acacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||| ||| ||| |||| |||||  |||||||||||||||||| ||||||||   || |||||||||||||||||||||||    
T  19579682 acacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgt 19579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 27932229 - 27932282
Alignment:
Q  49 cacgctgacacctctaataatttgagaaaattacataattccatgtaattacaa 102  Q
    ||||| |||||| ||||||||||||||||||||||||||||  |||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaa 27932282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 24906385 - 24906305
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggt 110  Q
    ||||||||||| ||| ||||||||  ||||   ||||||||||| ||||| |||||||||  |||||||||||||||||||    
T  24906385 gacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggt 24906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 187
Target Start/End: Complemental strand, 32767002 - 32766870
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacac 154  Q
    |||||| ||||||||||||||||||  || ||||| ||||||||| | ||||  ||||||||| ||| ||||| |  | || |||| |||||| | | ||    
T  32767002 gacaccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatac 32766903  T
Q  155 gcctaatcggaggagtttccatgcttcatagat 187  Q
    | |||||| ||||||| ||| ||||||||||||    
T  32766902 gtctaatctgaggagtgtccgtgcttcatagat 32766870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 3966494 - 3966565
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||| || |||||| |||||||||||||||||| ||| |||||  |||||||| | |||||||||||||||    
T  3966494 tgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgt 3966565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 10298562 - 10298629
Alignment:
Q  48 acacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||| |||||  |||||||||||| ||| | ||||||| | |||||||||||||||||||||||||    
T  10298562 acacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgt 10298629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 13287483 - 13287396
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| | |||||  |||||   ||||||||||| ||||| |||||||||  ||||| ||||||||||||||||||||    
T  13287483 gacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgt 13287396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 14674249 - 14674323
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcgg 109  Q
    |||||| ||| |||||||| |||||  |||||||||||| ||||| ||||||||   ||||||||||||||||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 18592073 - 18592135
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||| |||||| ||| ||||||||||||||||| ||||||||| | ||| |||||||||||    
T  18592073 gacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgt 18592135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 19737550 - 19737484
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    ||||||||||| |||  ||||||||||||||||||||||||||| ||| ||| | | ||||||||||    
T  19737550 tgacacgctgaaaccgataataatttgagaaaattacataattcaatgcaatcatatgtgtcggtgt 19737484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 30080546 - 30080468
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacc 147  Q
    ||||||||||| ||||||||| ||||||| |||||| ||||||| ||||| || ||| | || | ||||||||||||||    
T  30080546 tttgagaaaatgacataattcaatgtaatcacaagtatcggtgtggtgttagtgtcggacatgacacatgtcggacacc 30080468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 30183556 - 30183618
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatc 124  Q
    |||||||||||| || || |||| ||||  | |||||||||||||||||||||||||||||||    
T  30183556 ctaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgttggtatc 30183618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 19746753 - 19746716
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattcc 90  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19746753 ctgacaccgctaataatttgagaaaattacataattcc 19746716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 41633742 - 41633795
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||||||||| ||| |||||||||||  ||||||||||| ||||||||||||    
T  41633742 ctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgt 41633795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 43001807 - 43001856
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtg 111  Q
    |||||||||||| |||||||||||||||  ||||||||||||||| ||||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtg 43001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 6471950 - 6471886
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||| | |||| ||||||||||    
T  6471950 ctgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 15410533 - 15410481
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaatta 81  Q
    |||||||||||| ||| |||||||| |||||| |||||||||| |||||||||    
T  15410533 agacacgacacggacactgacacgccgacaccgctaataatttaagaaaatta 15410481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 21576797 - 21576745
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||||| |||||    
T  21576797 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 21576745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 33178016 - 33178084
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||  |||||||||| | ||||| ||||||||   |||||||||||||||||||||||    
T  33178016 tgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 33178084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 2436913 - 2436984
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| |||||| |||||||||||  ||||| |||||||||  ||| |||| | |||||||||||||||    
T  2436913 tgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcgtgt 2436984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 2548395 - 2548446
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| ||||||||||||||||||  |||||| | ||||||||||||||    
T  2548395 taataattagagaaaattacataattcagtgtaatcataagtgtcggtgtcg 2548446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 5873594 - 5873547
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaatt 80  Q
    |||||||| ||| ||||| || ||||||||||||||||||||||||||    
T  5873594 acgacacggacactgacatgccgacacctctaataatttgagaaaatt 5873547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 7677712 - 7677767
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| |||||||||  || ||||| |||||||||||||||||    
T  7677712 ctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgt 7677767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 15382452 - 15382538
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttg--agaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||  | ||||| | |||||||  | |||||||||||||||||||||    
T  15382452 gacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcg 15382538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 42893367 - 42893418
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||||||| ||||| ||||||| |  ||||||||||||||||||||||    
T  42893367 ctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 9449448 - 9449510
Alignment:
Q  34 cgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaa 96  Q
    ||||||| ||| || ||||| ||||||  ||||||||||||||||| ||||||||| ||||||    
T  9449448 cgacacggacactggcacgccgacaccaataataatttgagaaaatcacataattcaatgtaa 9449510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 15405116 - 15405062
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtc 107  Q
    |||||||  |||||||||||| ||||| | ||||||| |||||||||||||||||    
T  15405116 ctgacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 22013389 - 22013447
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataatt 88  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||  ||||||||||||||    
T  22013389 gacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatt 22013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 30502446 - 30502388
Alignment:
Q  56 acacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||| |||||||||||||||||| || ||||||  |||||||| | ||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 30542789 - 30542731
Alignment:
Q  56 acacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||| |||||||||||||||||| || ||||||  |||||||| | ||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 41558701 - 41558651
Alignment:
Q  67 aatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||||| ||||||||| ||||||||| | ||||| |||||||||    
T  41558701 aatttgagaaaatgacataattcaatgtaattaaatgtgtcagtgtcgtgt 41558651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 19820478 - 19820429
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaat 79  Q
    ||||||||||| ||| |||||| | |||||| ||||||||||||||||||    
T  19820478 gacacgacacggacactgacactccgacaccgctaataatttgagaaaat 19820429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 30098334 - 30098370
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaatta 30098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 35252301 - 35252253
Alignment:
Q  142 gacacctgaacacgcctaatcggaggagtttccatgcttcatagatcaa 190  Q
    ||||||||||||||||||||| ||||||| |   |||||||||||||||    
T  35252301 gacacctgaacacgcctaatccgaggagtatatgtgcttcatagatcaa 35252253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 47989472 - 47989627
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaag 128  Q
    |||||||||||  ||| |||||||| |||||   ||||||||| | ||||| |||||||||  |||||||||||||||||||||||||| ||| ||| |     
T  47989472 agacacgacacagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggac 47989570  T
Q  129 ataatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
    |  | ||||||| |||| | | |||||||||||| ||||||| ||| ||||||||||    
T  47989571 acgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 5376584 - 5376497
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| | |||||| |||||| |||||||||| ||||||| |||||||||  |||||||| |||||||||||||||||    
T  5376584 gacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgt 5376497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 6612255 - 6612168
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| |||||||| || ||   ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  6612255 gacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgt 6612168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 10572673 - 10572582
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||||||| | ||| |||||||| |||||| |||||||||||||||||| |||||||||  |||||||| | |||||||||| ||||||||    
T  10572673 gacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgttggt 10572582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 42359532 - 42359449
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||| ||||| ||| |||||||||||||| ||||||||||||| ||||| ||| |||||  |||||||||||||||||||||||    
T  42359532 acacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 42359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 24577253 - 24577183
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||||  |||||||||||| ||||| |||||||||  ||||||||||||||||||||||||||    
T  24577253 gacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 24577183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 41877555 - 41877470
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||  ||| ||  |||| |||||| |||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  41877555 agacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcg 41877470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 1486790 - 1486706
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| | | ||||||||||||||  |||||||||||| ||||| |||||||||  |||||||| |||||||||||||||||    
T  1486790 acgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt 1486706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 6427325 - 6427412
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||| |||| ||| ||||||||  ||||| |||||||||||||||||| ||||||||| ||||||||| | |||| ||||||||||    
T  6427325 gacacggcacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgt 6427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 7918295 - 7918208
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||  ||| ||||||||||||| | |||||||||||||||||| |||||||||  |||||||| | ||||| |||||||||    
T  7918295 gacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 38078740 - 38078661
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||| |||||||  |||||  |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  38078740 gacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 38078661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 21378553 - 21378635
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    ||||||||||| |||| ||||| | |||||  ||||||| |||| |||||||||||||||  |||||||||||||||||||||    
T  21378553 gacacgacacggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 31694749 - 31694639
Alignment:
Q  75 aaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcctaatcggaggagtttcc 174  Q
    ||||| |||||||||  | |||||||||||||||||||||||| ||| ||| | | || |||| |  |||||| |||||||||||||| ||||||| |||    
T  31694749 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtcc 31694650  T
Q  175 atgcttcatag 185  Q
     ||||||||||    
T  31694649 gtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 9709794 - 9709879
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||| ||||| ||  ||||| |||||||||||||||||| |||||||||  |||||||| | ||||||||||||    
T  9709794 agacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcg 9709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 5927424 - 5927340
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| ||||||||| ||||  |||||||||||| ||||| | ||||||  ||||||||||||||||| ||||||    
T  5927424 gacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcg 5927340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 113290 - 113361
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| |||||  |||||||||||| ||||| |||||||||  ||||||||||||||| ||||||||||    
T  113290 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt 113361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 36878452 - 36878519
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||| |||||| |||||||||||||||||| |||||||||  |||||||| | |||||||||||    
T  36878452 tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 1705051 - 1704989
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||| ||||||||||||| ||||| |||||||||   |||||||||||||||||||||||||    
T  1705051 gacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgt 1704989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 22947742 - 22947792
Alignment:
Q  58 acctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    |||||||||||||||||||||||||||||||| | || |||||||||||||    
T  22947742 acctctaataatttgagaaaattacataattcaaagttattacaagtgtcg 22947792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 23636132 - 23636050
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||||| |||||||||||| || ||| | || |||||||||||||||||||||||  |||||||  | |||||||||||    
T  23636132 acacgacacggacattgacacgccgaaaccgccaaaaatttgagaaaattacataattcagtgtaattgtatgtgtcggtgtc 23636050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 398849 - 398780
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||||||| ||| |||||||| |||||| |||||||||||| ||||| |||||||||  ||||||||    
T  398849 gacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 6332678 - 6332742
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaa 127  Q
    |||||||||||| ||||| |||||||||  ||||||||||||| |||||||||||||||| |||||    
T  6332678 ctaataatttga-aaaatcacataattcagtgtaattacaagtatcggtgtcgtgttggtgtcgaa 6332742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 187
Target Start/End: Original strand, 5944256 - 5944415
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaa--ttacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaa 127  Q
    ||||||||||  ||| |||||||| | |||  |||||||||||| ||||  | |||||||||  |||||||| ||||||||||||||||| | |  || |    
T  5944256 gacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacgga 5944355  T
Q  128 gataatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatagat 187  Q
     | || ||||||| |||||| | | |||||||||| ||||||| | | ||||||||||||    
T  5944356 cacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatagat 5944415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 18190169 - 18190109
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||  |||||||||||| |||||||||||||||  ||||||||||||||||| ||||    
T  18190169 ctgacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 22881684 - 22881616
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||  |||||||||||| ||||| ||||||||   |||||||||||||||||||||||    
T  22881684 tgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22881616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 34371712 - 34371779
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    |||||||| ||||||||| |||||||| |||||||||  |||||||| | |||||||||||||||||||    
T  34371712 ctgacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggt 34371779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 609526 - 609483
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattc 89  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  609526 tgacacgccgacaccactaataatttgagaaaattacataattc 609483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 2896205 - 2896146
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattc 89  Q
    ||||| ||||| ||| |||||||| |||||| |||||||||||||||||| |||||||||    
T  2896205 gacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattc 2896146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 22515954 - 22515887
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||| |||||  |||||||||||| ||||| ||||||||   |||||||||||||||||||||||    
T  22515954 gacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22515887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 31015050 - 31015097
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcgg 109  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||    
T  31015050 ctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 46348462 - 46348383
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||| |||||||| |||||  |||||||||||| ||||| | ||||||   |||||||||||||||||||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 46348383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 48450671 - 48450592
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcgg 109  Q
    ||||||||||| ||| ||||||||  ||||  |||||||||||| ||||| ||||||||   ||||||||||||||||||    
T  48450671 gacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 3490458 - 3490396
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    |||||||| |||||  ||||||||||||||||| ||||| ||||  |||||||||||||||||    
T  3490458 tgacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagtgtcg 3490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 9828036 - 9828106
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||| |||||| |||||||||||| ||||| |||||||||  |||||||  | |||||||||||||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgt 9828106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 18337338 - 18337388
Alignment:
Q  64 aataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 18337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 34298410 - 34298480
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    |||||||||||| | | |||||| | |||||| |||||||||||||||||| |||||||||  ||||||||    
T  34298410 agacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 113
Target Start/End: Complemental strand, 40258984 - 40258934
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||||||||| ||||| |||||||||  ||||||||||||||||||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 1262859 - 1262928
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||||||| |||  ||||||| |||||  |||||||||||||||||| ||||||||| || ||||||    
T  1262859 gacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 18556535 - 18556454
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtg 116  Q
    |||||| ||| |||||||| |||||  |||||||||||| || || ||||||||  |||||||||||||| | |||||||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcgtg 18556454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 19058925 - 19058856
Alignment:
Q  45 ttgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||| |||||  |||||||||| | || || |||||||||  |||||||||||||||||||||||    
T  19058925 ttgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcg 19058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 25361881 - 25362012
Alignment:
Q  50 acgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctg 149  Q
    |||| |||||| || ||||||||||||||| |||||||||  |||||||| | ||||| ||||||||| ||| |||  || |  ||||||| |||||| |    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcg--gacacgacatgtccgacaccgg 25361978  T
Q  150 aacacgcctaatcggaggagtttccatgcttcatag 185  Q
    ||||  ||||||| || |||| ||| ||||||||||    
T  25361979 aaca--cctaatccgaagagtgtccgtgcttcatag 25362012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 28663628 - 28663668
Alignment:
Q  75 aaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  28663628 aaaatcacataattctatgtaattacaagtgtcggtgtcgt 28663668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 39130851 - 39130767
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||| | | ||||||||||||||||   ||||||||| ||||||||| ||||||   |||||||| | ||||||||||||    
T  39130851 gacacgacatggatattgacacgctgacactattaataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcg 39130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 40917726 - 40917879
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaaga 129  Q
    ||||||||||| | | |||||||| |||||  |||||||||||| |||||  || ||||   ||||||||||||| |||||||||||| ||| | | | |    
T  40917726 gacacgacacggatactgacacgccgacacagctaataatttgaaaaaat--cacaattaagtgtaattacaagtctcggtgtcgtgtcggtgttggaca 40917823  T
Q  130 taatacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
      | || |||| |||||| | |||||||||||| ||||| | ||| ||||||||||    
T  40917824 cgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 44482240 - 44482292
Alignment:
Q  65 ataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||||||| |||||||||  |||||||| | |||||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 44482292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 51410024 - 51410084
Alignment:
Q  55 gacacctctaataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||| ||||||||||||| |||| | |||||||||  |||||||||||||||||||||||    
T  51410024 gacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 51410084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 10475049 - 10475002
Alignment:
Q  42 acattgacacgctgacacctctaataatttgagaaaattacataattc 89  Q
    |||||||||||| |||||| ||||||| |||||||||| |||||||||    
T  10475049 acattgacacgccgacaccgctaataacttgagaaaatcacataattc 10475002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 20157434 - 20157347
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||  || ||||||   |||||| |||||||| ||||||||| |||||||||  |||||| | | |||||||||||||||    
T  20157434 gacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgt 20157347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 28273156 - 28273089
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||| ||||||||  ||||| |||||| ||||| | |||||||  ||||||||||||||||||||||    
T  28273156 tgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 37055908 - 37055853
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||||||||||||||||||   ||||||||||||| || || ||||||    
T  37055908 ctaataatttgagaaaattacataatttagtgtaattacaagtatcagtatcgtgt 37055853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 9629959 - 9629897
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||| |||||||||||| ||||| | |||||||  ||| |||| |||||||||||||||||    
T  9629959 gacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgt 9629897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 25272494 - 25272544
Alignment:
Q  67 aatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||||| ||||||||   |||||||| |||||||||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 28674792 - 28674834
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattc 89  Q
    |||||||| |||||  |||||||||||||||||||||||||||    
T  28674792 gacacgctaacaccgttaataatttgagaaaattacataattc 28674834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 30173801 - 30173759
Alignment:
Q  75 aaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||  ||||||||||||||||||||||||||    
T  30173801 aaaattacataactcagtgtaattacaagtgtcggtgtcgtgt 30173759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 32461515 - 32461465
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    |||||||||||| ||||| ||||||||  |||||||||||||||| |||||    
T  32461515 ctaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 1864931 - 1864882
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    ||||||||||||||||| |||||||||  |||||||| | ||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 12993167 - 12993256
Alignment:
Q  28 tagacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||||||||| | | | || |||||| ||||||||||  | ||||||| |||||| ||||||||| |  ||||||||| ||||    
T  12993167 tagacacgacacgtacactaagatgccgacaccgctaataatttacgtaaattacgtaattcaatgtaattatatatgtcggtgttgtgt 12993256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 24462315 - 24462263
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||| ||||| ||||||||| ||||||| |||||| || |||||||||||||    
T  24462315 tttgaaaaaatgacataattcaatgtaatcacaagtttcagtgtcgtgttggt 24462263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 31672947 - 31672895
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||| || ||||||  ||||||||||||| |||||||||    
T  31672947 ctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcg 31672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 37598823 - 37598890
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||  |||||||||||| ||||| ||| |||||  |||||||| ||||||||||||||    
T  37598823 tgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcg 37598890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 40181878 - 40181930
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||||||||| |||||||||  |||||||| | || |||||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcg 40181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 40747824 - 40747788
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  40747824 taataatttgagaaaatgacataattcaatgtaatta 40747788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 20147 - 20234
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| ||||| |||||||||  |||||||||||||||| |||||||||    
T  20147 gacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 20234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 847926 - 848017
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||||||||  ||| |||||||| ||  || ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||||    
T  847926 gacacgacacagacactgacacgccgatgccgctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggt 848017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 23293070 - 23292986
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| ||||| |||||||||  | |||||||||||||||||||||    
T  23293070 gacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 23292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 19482642 - 19482736
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtat 123  Q
    |||||||||||  ||| |||||||| |||||  |||||||||||| || || |||||||||  ||||||||||||||| |||||||||| |||||    
T  19482642 agacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtat 19482736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 12895168 - 12895113
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| ||||||||| | |||||||||||||||||||||||||    
T  12895168 ctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgt 12895113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 24613753 - 24613702
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  24613753 ctaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 30298926 - 30299008
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcgtg 116  Q
    |||||| ||| |||||||| |||||  |||||||||||| |||| | |||||||||  |||||||||||||||||||||||||    
T  30298926 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 30327794 - 30327876
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcgtg 116  Q
    |||||| ||| |||||||| |||||  |||||||||||| |||| | |||||||||  |||||||||||||||||||||||||    
T  30327794 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtg 30327876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 2362047 - 2361975
Alignment:
Q  42 acattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||| | |||||  |||||||||||| ||||||||||||||   |||||||| ||||||||||||||    
T  2362047 acattgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcg 2361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 21945510 - 21945562
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  21945510 ctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 21945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 54580087 - 54580023
Alignment:
Q  50 acgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||  |||||||||||| ||||| |||||||||  |||||||| ||||||||||||||    
T  54580087 acgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 54580023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 8423777 - 8423718
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| |||||||||||||||||| |||||||||  |||||||| || |||||||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcg 8423718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 11596404 - 11596349
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||| ||||||||||    
T  11596404 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgt 11596349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 37496695 - 37496766
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||| |||||||  ||||  ||||||||||| ||||||||| ||||||| |||||||||||||| ||||    
T  37496695 tgacacgttgacaccgataattttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgttgtgt 37496766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 5225662 - 5225540
Alignment:
Q  65 ataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcctaatcgg 164  Q
    ||||||||||| ||| ||||||||| ||| ||| | | ||||||||||||||||||| ||| | |  |||||| |||||| || | ||||||||||||      
T  5225662 ataatttgagataatgacataattcaatgcaataatatgtgtcggtgtcgtgttggtgtcggacacgatacatatcggaccccgggacacgcctaatcta 5225563  T
Q  165 aggagtttccatgcttcatagat 187  Q
     ||||| ||  ||||||||||||    
T  5225562 tggagtatctgtgcttcatagat 5225540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 29205451 - 29205501
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    |||||||||||| ||||| |||||||||  |||||||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 35723453 - 35723383
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaat-tacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||||| |||||| ||||||||||||||||||  ||||||||| ||||||||| | ||||| |||||||    
T  35723453 tgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcgt 35723383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 12797418 - 12797338
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| ||| |||||||| | ||   |||||||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  12797418 acgacacggacactgacacgccggcaaaactaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcg 12797338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 12895355 - 12895274
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| ||| |||||||| |||||   ||||||||||| ||||| ||||||||   |||||||| ||||||||||||||    
T  12895355 acgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcg 12895274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 20633459 - 20633535
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    |||||||| ||| ||| |||||||  |||||| |||||||||||| ||||   |||||||| ||||||||||||||||||    
T  20633459 agacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa---cataattcaatgtaattacaagtgtcg 20633535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 36635299 - 36635368
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    |||||||| || ||| ||||||||  ||||| |||||||||||||||||| |||||||||  ||||||||    
T  36635299 gacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatta 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 49431000 - 49431085
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| || ||| |||||||| |||||  |||||||||||| |||| | |||||||||  |||||||| ||||||||||||||    
T  49431000 gacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcg 49431085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 51701265 - 51701330
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaa 127  Q
    |||||||||||| ||||||||||||||   |||||||||||||||  ||||||||| ||| |||||    
T  51701265 ctaataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcggtgtcgaa 51701330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 28084512 - 28084584
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| |||||  |||| ||||||| |||| | ||||||||| ||||||||||||||||| |||||||||    
T  28084512 tgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgt 28084584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 28964300 - 28964248
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||| |||||||||  |||||||||||||||| ||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcg 28964248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 30982935 - 30982875
Alignment:
Q  57 cacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||| ||||| |||||||||||| ||||| |||  |||||||| |||||||||||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgt 30982875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 3947818 - 3947763
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| |||||  ||||||||  |||||||||||||||| |||||||||    
T  3947818 ctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgt 3947763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 40613441 - 40613504
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcgg 109  Q
    |||||||| |||||| |||||| ||||||||||| |||||||||  |||||||| | |||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 24343482 - 24343560
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    ||||||||||| ||   ||||||| |||||   |||||||||||||||||||||||||||  |||||||| | ||||||    
T  24343482 gacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcg 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 37698710 - 37698756
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    |||||| |||||||||||||||||||||| |||||||  ||||||||    
T  37698710 ctgacatctctaataatttgagaaaattatataattcagtgtaatta 37698756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 38148784 - 38148718
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    |||||| |||||| ||||||||||| |||||||||  |||||||  || ||||| ||||||||||||    
T  38148784 gacaccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggt 38148718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Complemental strand, 43300022 - 43299988
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaat 97  Q
    ||||||||||||||||||||||||||| |||||||    
T  43300022 taataatttgagaaaattacataattcaatgtaat 43299988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 43300624 - 43300658
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaat 97  Q
    ||||||||||||||||||||||||||| |||||||    
T  43300624 taataatttgagaaaattacataattcaatgtaat 43300658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 2234241 - 2234294
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    |||||||||| ||||  | ||||||||||||||| ||||||||| |||||||||    
T  2234241 tgacacgctgtcaccgttgataatttgagaaaatcacataattcaatgtaatta 2234294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 6485662 - 6485613
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    ||||||||||| ||||| ||||||||   |||||||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 7214580 - 7214523
Alignment:
Q  56 acacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||| |||||||||||||||||| ||||||||  ||||||||| | | |||||||||    
T  7214580 acaccactaataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgtc 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 11135346 - 11135301
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtc 107  Q
    |||||| ||||||||||||||||||||| || |||||||| |||||    
T  11135346 ctaatagtttgagaaaattacataattcaatataattacatgtgtc 11135301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 13307891 - 13307936
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  13307891 tttgagaaaatgacataattcaatgtaatcacaagtgttggtgtcg 13307936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 19230360 - 19230315
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    ||||||||||||||||| ||||||||| ||||||||| | ||||||    
T  19230360 taataatttgagaaaataacataattcaatgtaattataggtgtcg 19230315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 31800530 - 31800477
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||||||| | ||||||| ||||||  |||||||||||||||||||| ||||    
T  31800530 ctaataattttaaaaaattaaataatttaatgtaattacaagtgtcggtatcgt 31800477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 42640609 - 42640646
Alignment:
Q  151 acacgcctaatcggaggagtttccatgcttcatagatc 188  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  42640609 acacgcctaatccgaggagtttccgtgcttcatagatc 42640646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 44797012 - 44796975
Alignment:
Q  64 aataatttgagaaaattacataattccatgtaattaca 101  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  44797012 aataatttgagaaaataacataattcaatgtaattaca 44796975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 1074790 - 1074830
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataat 87  Q
    ||||| |||||||| |||||||||||||||||| |||||||    
T  1074790 gacacactgacaccactaataatttgagaaaatcacataat 1074830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 7012040 - 7012100
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattc 89  Q
    ||||| |||||| |||  ||||||| ||||||  ||||||||||||||||| |||||||||    
T  7012040 agacaggacacggacaccgacacgccgacaccgataataatttgagaaaatgacataattc 7012100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 13801238 - 13801282
Alignment:
Q  205 gcgacaaatcctagctgttggcatagtgacacaaacaggggcata 249  Q
    ||||||||| |||||||||||||| || ||||||||||| |||||    
T  13801238 gcgacaaattctagctgttggcatggtaacacaaacaggagcata 13801282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 20521934 - 20521874
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattc 89  Q
    |||||||||||| ||| |||||||| || |||  ||||||||||| ||||| |||||||||    
T  20521934 agacacgacacggacactgacacgccgataccgataataatttgataaaatcacataattc 20521874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 40481612 - 40481687
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgt 106  Q
    ||||||||||  ||| |||||||| || ||  |||||||||||| ||||| |||||||||  |||||||||||||||    
T  40481612 gacacgacactgacactgacacgccgatacaactaataatttga-aaaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 40742569 - 40742653
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| ||||||| |||| ||||||  ||||||||||||||||| | |||||    |||||||| | |||||| ||||||||    
T  40742569 acgacacggacattgaaacgccgacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgt 40742653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 11223930 - 11223792
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacac 146  Q
    |||||||||||||  |||||| ||||| ||||| |||||||||  |||||||||||||||||||||| ||| ||| ||| | |  | || |||| |||||    
T  11223930 gacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacac 11223832  T
Q  147 ctgaacacgcctaatcggaggagtttccatgcttcataga 186  Q
    | | |||||||||||| ||||||| ||| |||||||||||    
T  11223831 cgggacacgcctaatctgaggagtgtccgtgcttcataga 11223792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 18841097 - 18841014
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||||||| | ||| ||||||||||||||  |||||||||||| ||||||||||||||   ||||||||||||||||||||||    
T  18841097 gacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtc 18841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 183
Target Start/End: Complemental strand, 36756425 - 36756275
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataa 132  Q
    |||||||  ||| |||||||  |||||  ||||||||||||  |||| |||||||||  |||||||| |||||||||||||||||| || ||||| | ||    
T  36756425 acgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaa 36756326  T
Q  133 tacatgtcggacacctgaacacgcctaatcggaggagtttccatgcttcat 183  Q
     ||||||| ||||||  |||||||||||||  |||||| ||  ||||||||    
T  36756325 cacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 37558957 - 37559036
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||| |||||||| |||||  |||||||||||  ||||| ||||||||| ||||||||||||||||||||||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcg 37559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 4882748 - 4882626
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcctaat 161  Q
    ||||| |||||| ||||| | |||||||  ||||||||||||||||| |||||||| ||| ||  | |  ||||||||||| ||||||||||| ||||||    
T  4882748 ctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacgatacatgtcgggcacctgaacacacctaat 4882649  T
Q  162 cggaggagtttccatgcttcata 184  Q
      ||||||| || ||||||||||    
T  4882648 tcgaggagtatctatgcttcata 4882626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 15972851 - 15972932
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| ||| |||||||| |||||   ||||||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  15972851 acgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcg 15972932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 19536482 - 19536397
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| |||| | |||||||||  |||||||||||||||||||||||    
T  19536482 gacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 37419752 - 37419873
Alignment:
Q  64 aataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcctaatcg 163  Q
    |||||||||| ||||| ||| |||||  |||||||||||||| ||||||||||| ||| ||| | |  || | |||| |||||| | ||||||||||||     
T  37419752 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatcc 37419851  T
Q  164 gaggagtttccatgcttcatag 185  Q
    ||||||| ||| ||||||||||    
T  37419852 gaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 44860318 - 44860386
Alignment:
Q  53 ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    |||||||| ||||||||||||||||||  ||||||||  |||||||| | |||||||||||||||||||    
T  44860318 ctgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggt 44860386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 20539758 - 20539672
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtg 116  Q
    ||||||||||| ||| |||||||  |||||  |||||||||||| ||||| | ||||||   |||||||||||||||||||||||||    
T  20539758 gacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 42832335 - 42832277
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||| |||||||||||||||||||||||| |||  |||||||| |||||||||||||    
T  42832335 gacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 12668475 - 12668414
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtat 123  Q
    |||||||||||| ||||| |||||||||  |||||||| ||||||||||||||||| |||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcggtat 12668414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 15657839 - 15657928
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttg 119  Q
    ||||||||||| ||| | |||||| ||| |  |||||||||||  ||||| |||||||||  ||||||||||| ||||||||||||||||    
T  15657839 gacacgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttg 15657928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 21616737 - 21616806
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaatta 99  Q
    ||||||||||| |||  ||||||| |||||| |||||||||||||||||| |||||||||  ||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 21616806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 44605190 - 44605141
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgt 112  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  44605190 taataatttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 2438783 - 2438719
Alignment:
Q  50 acgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||  |||||||||| | ||||| |||||||||  |||||||||||||||||||||||    
T  2438783 acgctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 2438719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 21374778 - 21374706
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtc 107  Q
    |||||| ||| | |||||| |||||  |||||||||||| |||||||||||||||  ||||||||||||||||    
T  21374778 gacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 26769503 - 26769643
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacac 146  Q
    ||||||| |||||  |||||||||||| || || |||| ||    |||||||||||||||||||||| ||| ||||||| | |  | || |||| |||||    
T  26769503 gacacgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacac 26769602  T
Q  147 ctgaacacgcctaatcggaggagtttccatgcttcatagat 187  Q
      | |||||||||||| ||||||| ||| ||||||||||||    
T  26769603 tgggacacgcctaatccgaggagtgtccgtgcttcatagat 26769643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 30404934 - 30404850
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||| |||||| ||| |||||||| |||||   ||||||||||| ||||| |||||||||  |||||||||||||||||| ||||    
T  30404934 gacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcg 30404850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 39323264 - 39323316
Alignment:
Q  55 gacacctctaataatttgagaaaattacataattccatgtaattacaagtgtc 107  Q
    |||||| |||||||||||| |||||||||||||||  ||||||||||||||||    
T  39323264 gacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 12941020 - 12940941
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    |||||||||||| ||| ||||||| ||||||  |||||||||||| ||||| | |||||||  ||||||||||| |||||    
T  12941020 agacacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 18420486 - 18420431
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||||||||| ||||||||| ||| ||||| |||||||||||| ||||    
T  18420486 ctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgt 18420431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 30717582 - 30717527
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||||| |||||||||  ||||||||||||||||| ||||||||    
T  30717582 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgt 30717527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 974754 - 974812
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttgg 120  Q
    |||||||||||| || || |||| ||||  |||||||||||||||||||||||||||||    
T  974754 ctaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgttgg 974812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 21782902 - 21782815
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttg 119  Q
    ||||||||||  ||| |||||||| |||||  |||||||||||||||||| |||||||||  |||||||  | ||| |||||||||||||    
T  21782902 gacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaatt--atgtgccggtgtcgtgttg 21782815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 40681990 - 40682048
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    ||||||||||||||||| ||||||||| |||||||| || |||||  ||||||||||||    
T  40681990 taataatttgagaaaatgacataattcaatgtaattgcacgtgtcaatgtcgtgttggt 40682048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 6940233 - 6940310
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggt 110  Q
    |||||||| ||| |||||||| |||||  |||||||||| | ||| ||||||||||   |||||||||||||||||||    
T  6940233 acgacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggt 6940310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 18421941 - 18422022
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| ||| |||||||| |||||   ||||||||| | || || |||||||||  |||||||||||||||||||||||    
T  18421941 acgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 23718001 - 23718082
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtg 111  Q
    |||| |||||| ||| |||||| | |||||| |||||||||||||||| | |||||||||  |||||||| | |||||||||    
T  23718001 gacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 24105673 - 24105754
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtg 111  Q
    |||| |||||| ||| |||||| | |||||| |||||||||||||||| | |||||||||  |||||||| | |||||||||    
T  24105673 gacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 30335391 - 30335476
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||| |  ||||| |||||  |||||||||||| ||||| ||||||||   ||||||||||| |||||||||||    
T  30335391 agacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 33153413 - 33153486
Alignment:
Q  44 attgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||| || || |||||| |||| | ||||| |||||||||  |||||||||||||||| |||||||||    
T  33153413 attgacacgccgaaacatctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcgtgt 33153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 43586050 - 43586005
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  43586050 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 43586005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 2331773 - 2331854
Alignment:
Q  34 cgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||| ||||||||||||  |||||  ||||||||||||||||| |||||||||  |||| ||  | |||||||||||||||    
T  2331773 cgacacggacattgacacgcaaacaccattaataatttgagaaaatcacataattcagtgtattt--atgtgtcggtgtcgtgt 2331854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 21624242 - 21624326
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaatta-cataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||  ||| |||||||| |||||  |||||||||| | |||| || ||||||||  |||||||||||||||||||||||    
T  21624242 acacgacacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcg 21624326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 23058527 - 23058439
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| ||| ||||||||  ||||   ||||||||||| |||| | ||||||| |  ||||||||||||||||||||||||||    
T  23058527 gacacgacacggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtcgtgt 23058439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 34785067 - 34784971
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcg 125  Q
    |||||||||||| ||| |||||| | |||||  |||||  ||| ||||||| ||||||||   |||||||| | ||||||||||||||| |||||||    
T  34785067 agacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcg 34784971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 38117227 - 38117159
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||| |||||  |||||||||||| ||||| ||||| |||  ||||||||||||||| |||||||    
T  38117227 tgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcg 38117159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 114
Target Start/End: Original strand, 5040754 - 5040793
Alignment:
Q  75 aaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  5040754 aaaatcacataattcaatgtaattacaagtgtcggtgtcg 5040793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 21091714 - 21091781
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||| | |||||| |||||||||| ||||||| ||||| |||  |||||||||||||||| |||||    
T  21091714 tgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtcagtgtc 21091781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 34221549 - 34221502
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcgg 109  Q
    |||||||||||| |||| |||||||||| ||| |||||||||||||||    
T  34221549 ctaataatttgaaaaaaatacataattctatgcaattacaagtgtcgg 34221502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 13273069 - 13273011
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    |||| |||||||||||||| ||||||| || |||||| || |||| |||||||||||||    
T  13273069 taatcatttgagaaaattatataattcaatctaattataaatgtcagtgtcgtgttggt 13273011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 20242812 - 20242727
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||| | ||| |||||||| |||||  |||||  ||| ||||||| |||||||||  |||||||| | ||||||||||||    
T  20242812 agacacgacatggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 30471032 - 30471093
Alignment:
Q  49 cacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggt 110  Q
    |||||||| ||  |||||| ||||||||||| ||||||||| ||||||||| | ||||||||    
T  30471032 cacgctgatactcctaatattttgagaaaatcacataattcgatgtaattatatgtgtcggt 30471093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 5367199 - 5367251
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||||| |||| |||||||||  |||||||| | ||||||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 23921261 - 23921297
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaatta 99  Q
    |||||||||||||||||||||||||||  ||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaatta 23921297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 34337257 - 34337182
Alignment:
Q  33 acgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||| |||||||||||| |||||   | ||||||||| ||||| ||||||||     ||||||||||||||||||||    
T  34337257 acgacacggacattgacacgccgacacagttgataatttgaaaaaatcacataatt-----taattacaagtgtcggtgtc 34337182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 37411312 - 37411244
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||| || |||||| |||||||||||||||||| |||||||||  ||| |||| | |||||| |||||    
T  37411312 tgacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcg 37411244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 192334 - 192256
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtc 107  Q
    |||||||| ||| ||| |||||||| ||||||  |||||||||||||||||||||||||||  ||||||||||||||||    
T  192334 agacacgatacggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtc 192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 178903 - 178819
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaatta-cataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| ||||| | ||||||||  |||||||||||||||| |||||    
T  178903 gacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtc 178819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 63750 - 63831
Alignment:
Q  33 acgacacgtacattgacacg-ctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    |||||||| ||| ||||||| || ||||| ||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  63750 acgacacggacaatgacacgtctaacaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 185
Target Start/End: Complemental strand, 3900 - 3778
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcctaatc 162  Q
    ||||||||| | ||||| |||||||||  |||||||||||||||| ||||||||||||| ||| | |  | ||||||| |||| |   ||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatc 3801  T
Q  163 ggaggagtttccatgcttcatag 185  Q
     ||||||| ||| ||||||||||    
T  3800 cgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 8687 - 8562
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcggacacctgaacacgcctaat 161  Q
    |||||||||||| || || |||||||||  | ||||||||| |||||||||||||| ||||||| | |  |||| |||| |||||  | |||||||||||    
T  8687 ctaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaat 8588  T
Q  162 cggaggagtttccatgcttcatagat 187  Q
      ||||||| ||| ||||||||||||    
T  8587 tcgaggagtgtccgtgcttcatagat 8562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 46657 - 46741
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||   ||||||||||| ||||| |||||||||  ||||||||||| |||||||||||    
T  46657 gacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 13380 - 13459
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||| |||||||| |||||  |||||||||||||||||| |||||||||  || ||||||||| ||||||||||    
T  13380 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcg 13459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 21947 - 21868
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||| ||| |||||||| |||||  |||||||||||||||||| |||||||||  || ||||||||| ||||||||||    
T  21947 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcg 21868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 225352 - 225274
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcg 108  Q
    ||||||||||| ||| |||||||| |||||   ||||||||||||||||| ||||||| | ||||||||| ||||||||    
T  225352 gacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcg 225274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 17815 - 17750
Alignment:
Q  48 acacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||||||||||  |||||||||||| ||||| ||||||||   ||||||||||||||||||||||    
T  17815 acacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 8773 - 8857
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||| |||||||| |||||  |||||||||||| ||||| | || |||   |||||||||||||||||||||||    
T  8773 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcg 8857  T

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Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 545 - 462
Alignment:
Q  31 acacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||| |||| ||| ||| |||| |||||  |||||||||||| ||||| ||| |||||  |||||||||||||||||||||||    
T  545 acacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 462  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 51791 - 51862
Alignment:
Q  35 gacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgt 106  Q
    |||||| ||| |||||||| |||||  |||||||||||| ||||| |||||||||  |||||||||||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 53171 - 53242
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| || ||| | |||||||||||||||| |||||||||  |||||||| ||||||||||| |||||    
T  53171 tgacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgt 53242  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 9799 - 9740
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggt 121  Q
    |||||||||||||||||| || ||||||  |||||||| | |||||||||||||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggt 9740  T

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Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 135364 - 135309
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||||||||| |||||||||  |||||||| | |||||||||||||||    
T  135364 ctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgt 135309  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 44592 - 44522
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||| ||||||||| |||| ||||||||||||| |||||||||  |||||||| | |||||||| ||||||    
T  44592 gacaagctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgt 44522  T

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Target: scaffold0376 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 6319 - 6372
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgt 115  Q
    |||||||||||| |||||| |||||||| ||||||||| | |||||||||||||    
T  6319 ctaataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgtcgt 6372  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 130457 - 130538
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtg 111  Q
    ||||||||||| ||| ||||| || |||||   ||||| ||||| ||||| |||||||||  ||||||||||||||||||||    
T  130457 gacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 21017 - 21105
Alignment:
Q  29 agacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||| ||| ||||| ||||||||   ||||||||||||||||| |||||| ||  | |||||| | |||||||| ||||||    
T  21017 agacacgacacggacactgacatgctgacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcggtatcgtgt 21105  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 8641 - 8728
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||| | ||| |||||||  ||||| |||||||||||  |||||| ||||| |||  | |||||| |||||||||||||||||    
T  8641 gacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcgtgt 8728  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 70286 - 70337
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    ||||||||||| ||||| |||||||||  |||||||| ||||||||||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcg 70337  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 23777 - 23832
Alignment:
Q  63 taataatttgagaaaatt-acataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    ||||||||||| |||| | |||||||||  ||||||||||||||||||||||||||    
T  23777 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 263424 - 263369
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||||||||||||  |||||||||  |||||||| ||||||| |||||||||    
T  263424 ctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgt 263369  T

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Target: scaffold0361 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 14522 - 14580
Alignment:
Q  47 gacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtg 105  Q
    ||||||| |||||  |||||||||||| ||||| |||||||||  ||||||||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 25819 - 25765
Alignment:
Q  63 taataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcgtgt 117  Q
    |||||||| |||||||| ||||||||   |||||||| |||||||||||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 71714 - 71855
Alignment:
Q  46 tgacacgctgacacctctaataatttg--agaaaattacataattccatgtaattacaagtgtcggtgtcgtgttggtatcgaagataatacatgtcgga 143  Q
    |||||||| |||||  |||||||||||  | ||||| ||| |||||  ||||||||| |||||| ||||||||| ||| ||| | | || || |||| ||    
T  71714 tgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccga 71813  T
Q  144 cacctgaacacgcctaatcggaggagtttccatgcttcatag 185  Q
    |||| | ||||| |||||| ||||||| ||  ||||||||||    
T  71814 caccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

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Target: scaffold0722 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 7084 - 7032
Alignment:
Q  62 ctaataatttgagaaaattacataattccatgtaattacaagtgtcggtgtcg 114  Q
    |||||||||||| ||||||||||||||   | ||||||||||||| |||||||    
T  7084 ctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcg 7032  T

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Target: scaffold0314 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 8962 - 9006
Alignment:
Q  69 tttgagaaaattacataattccatgtaattacaagtgtcggtgtc 113  Q
    ||||||||||| ||||||||| | ||||| |||||||||||||||    
T  8962 tttgagaaaatgacataattcaacgtaatcacaagtgtcggtgtc 9006  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 19551 - 19626
Alignment:
Q  30 gacacgacacgtacattgacacgctgacacctctaataatttgagaaaattacataattccatgtaattacaagtgt 106  Q
    ||||||||||  ||| |||||||| || ||  |||||||||||| ||||| |||||||||  |||||||||||||||    
T  19551 gacacgacactgacactgacacgccgatacaactaataatttga-aaaatcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 26384 - 26432
Alignment:
Q  46 tgacacgctgacacctctaataatttgagaaaattacataattccatgt 94  Q
    |||||||  |||||| |||||||||||||||||| ||||||||| ||||    
T  26384 tgacacgtcgacaccactaataatttgagaaaatcacataattcaatgt 26432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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