View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0218_low_35 (Length: 358)
Name: NF0218_low_35
Description: NF0218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0218_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 23518285 - 23518087
Alignment:
| Q |
1 |
ctctccactcctattcactactactctatttactgtcattgttgtgatcttgactaacaccaatccattcaataatgaccgtattcatgttccaagacgt |
100 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
23518285 |
ctctccactccttttcactactactctatttactgtcattgttgtgatcttgactaacaccactccattcaataatgaccgtattcatgttccaagacgt |
23518186 |
T |
|
| Q |
101 |
cgcgaggaaattgttgaatattatgtcatcgcaaatcaccaccaccaaccccaccctgacaaccacaaccatcatcctgcgttacctcctcctgacaag |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23518185 |
cgcgaggaaattgttgaatattatgtcatcgcaaatcaccaccaccaaccccaccctgacaaccacaaccatcatcctgcgttacctcctcctgacaag |
23518087 |
T |
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