View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0219_high_12 (Length: 259)
Name: NF0219_high_12
Description: NF0219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0219_high_12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 30 - 259
Target Start/End: Complemental strand, 32052210 - 32051982
Alignment:
| Q |
30 |
tcttcctccccttggggttgggaggggggttagtgttgtattttagggagcgacaaattggttgacaatgctctatggaggcgttacacatacaatgact |
129 |
Q |
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| T |
32052210 |
tcttcctccccttggggttgggaggggggttagtgttgtattttagggagcgacaaattggttgacaatgctctatggaggcgttacacatacaatgact |
32052111 |
T |
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| Q |
130 |
tgctttttgaggtttaaagtgttaaaaggaatcaaacatatctgctacatggcctcttaatgtgagcttttatgtagttgcaacaaaacaaacagatgca |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
32052110 |
tgctttttgaggtttaaagtgttaaaaggaatcaaacatatctgctacatggcctcttaatgtgagcttttatgtagttgc-acaaaacaaacagatgca |
32052012 |
T |
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| Q |
230 |
ttttattgtatagatgaatgttcacctata |
259 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
32052011 |
ttttattgtatagatgaatgttcacctata |
32051982 |
T |
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