View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0219_high_13 (Length: 249)

Name: NF0219_high_13
Description: NF0219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0219_high_13
NF0219_high_13
[»] chr4 (12 HSPs)
chr4 (34-239)||(36429270-36429475)
chr4 (34-239)||(36376225-36376430)
chr4 (34-239)||(36407115-36407320)
chr4 (34-239)||(36435723-36435928)
chr4 (37-239)||(36419277-36419479)
chr4 (34-239)||(36399658-36399863)
chr4 (46-239)||(36389469-36389660)
chr4 (34-179)||(36370513-36370658)
chr4 (34-164)||(36412313-36412443)
chr4 (181-239)||(36370433-36370491)
chr4 (53-97)||(40823841-40823885)
chr4 (54-98)||(48476691-48476735)
[»] chr2 (2 HSPs)
chr2 (55-173)||(2662470-2662588)
chr2 (55-99)||(2682025-2682069)
[»] chr8 (7 HSPs)
chr8 (73-140)||(15697353-15697420)
chr8 (56-137)||(15799843-15799924)
chr8 (73-145)||(15692677-15692749)
chr8 (56-140)||(15703715-15703799)
chr8 (56-136)||(15722546-15722626)
chr8 (73-137)||(15805392-15805456)
chr8 (133-203)||(23560564-23560634)
[»] chr3 (1 HSPs)
chr3 (61-98)||(13855176-13855213)
[»] scaffold0090 (1 HSPs)
scaffold0090 (61-98)||(8284-8321)
[»] chr1 (2 HSPs)
chr1 (61-98)||(47607375-47607412)
chr1 (55-95)||(47287663-47287703)
[»] chr7 (6 HSPs)
chr7 (53-97)||(20168090-20168134)
chr7 (53-97)||(20231557-20231601)
chr7 (53-97)||(20243622-20243666)
chr7 (53-97)||(20264016-20264060)
chr7 (53-97)||(20279525-20279569)
chr7 (61-97)||(20289266-20289302)


Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 36429475 - 36429270
Alignment:
Q  34 cttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagat 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36429475 cttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagat 36429376  T
Q  134 ctctatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataatttcaaaacgctttacccaatccaatgacga 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36429375 ctctatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataatttcaaaacgctttacccaatccaatgacga 36429276  T
Q  234 cctttg 239  Q
    ||||||    
T  36429275 cctttg 36429270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 36376430 - 36376225
Alignment:
Q  34 cttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagat 133  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36376430 cttgcttgtatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagat 36376331  T
Q  134 ctctatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataatttcaaaacgctttacccaatccaatgacga 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  36376330 ctctatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataatttcaaaacgctttccccaatccaatgatga 36376231  T
Q  234 cctttg 239  Q
    ||||||    
T  36376230 cctttg 36376225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 36407320 - 36407115
Alignment:
Q  34 cttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagat 133  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  36407320 cttgcttggatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcgtcaaggagaacattgctggcttttagat 36407221  T
Q  134 ctctatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataatttcaaaacgctttacccaatccaatgacga 233  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  36407220 ctctatgaattattttcagccttgaatcttggtgaagatataaaacacctcgagcaatcccacaaatgatttcaaaacgctttacccaatccaatgatga 36407121  T
Q  234 cctttg 239  Q
    ||||||    
T  36407120 cctttg 36407115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 36435928 - 36435723
Alignment:
Q  34 cttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagat 133  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  36435928 cttgcttgtatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcaaggagaacattgctggcttttagat 36435829  T
Q  134 ctctatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataatttcaaaacgctttacccaatccaatgacga 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| | ||    
T  36435828 ctctatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatgccacaaataatttcaaaacgcttaccccaatccaataatga 36435729  T
Q  234 cctttg 239  Q
    ||||||    
T  36435728 cctttg 36435723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 36419479 - 36419277
Alignment:
Q  37 gcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctc 136  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  36419479 gcttgaatttcatcttctccaaatattctagccataccaaaatccgagattttgggattcattacagcatcaaggagaacgttgctggcttttagatctc 36419380  T
Q  137 tatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataatttcaaaacgctttacccaatccaatgacgacct 236  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||    
T  36419379 tatggattattttcagccttgaatcttgatgaagatataatacacctcgagcaatcccacaaataatttcaaaacgcgtaacccaatccaatgatgacct 36419280  T
Q  237 ttg 239  Q
    |||    
T  36419279 ttg 36419277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 36399863 - 36399658
Alignment:
Q  34 cttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagat 133  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  36399863 cttgcttggatttcatcttctccaaatattctagccataccgaaatctgagattttgggattcatttcagcatcaaggagaacattgctggcttttagat 36399764  T
Q  134 ctctatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataatttcaaaacgctttacccaatccaatgacga 233  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| ||    
T  36399763 ctctatgaattattttcagccttgaatcttggtgaagatataaaacacctcgagcaatgccacaaataatttcaaaacgcttaccccaatccaatgatga 36399664  T
Q  234 cctttg 239  Q
    ||||||    
T  36399663 cctttg 36399658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 46 - 239
Target Start/End: Complemental strand, 36389660 - 36389469
Alignment:
Q  46 tcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctctatgaatta 145  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| || |||||||| |||||||||||||| ||||||||||| |    
T  36389660 tcatcgtctccaaatattctagccataccaaaatctgagattttagggttcattgcagcgtcaaggagaacattgctggcttttaggtctctatgaatga 36389561  T
Q  146 ttttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataatttcaaaacgctttacccaatccaatgacgacctttg 239  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| ||  ||||||||||||| ||||||||    
T  36389560 ttttcagccttgaatcttgatgaagatataaaacgcctcgagcaatcccac--ataatttcaaaacgtttgccccaatccaatgatgacctttg 36389469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 36370658 - 36370513
Alignment:
Q  34 cttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagat 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  36370658 cttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcatttcagcatcaaggagaacattgctggcttttagat 36370559  T
Q  134 ctctatgaattattttcagccttgaatcttgatgaagatataaaac 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  36370558 ctctatgaattattttcagccttgaatcttggtgaagatataaaac 36370513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 36412443 - 36412313
Alignment:
Q  34 cttgcttgaatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagat 133  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  36412443 cttgcttggatttcatcttctccaaatattctagccataccaaaatctgagattttgggattcattgcagcgtcaaggagaacattgctggcttttagat 36412344  T
Q  134 ctctatgaattattttcagccttgaatcttg 164  Q
    |||||||||||||||||||||||||||||||    
T  36412343 ctctatgaattattttcagccttgaatcttg 36412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 36370491 - 36370433
Alignment:
Q  181 cctcgagcaatcccacaaataatttcaaaacgctttacccaatccaatgacgacctttg 239  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  36370491 cctcgagcaatcacacaaataatttcaaaacgcttaacccaatccaatgatgacctttg 36370433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 40823841 - 40823885
Alignment:
Q  53 ctccaaatattctagccataccaaaatctgagattttgggattca 97  Q
    ||||||| ||||||||||||||||| ||||| ||||| |||||||    
T  40823841 ctccaaagattctagccataccaaagtctgatatttttggattca 40823885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 48476691 - 48476735
Alignment:
Q  54 tccaaatattctagccataccaaaatctgagattttgggattcat 98  Q
    |||||| ||||||||||||||||||||||| || || ||||||||    
T  48476691 tccaaaaattctagccataccaaaatctgaaatcttaggattcat 48476735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 2662470 - 2662588
Alignment:
Q  55 ccaaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctctatgaattattttcagcc 154  Q
    ||||| ||||| ||||| ||||| || || ||||| ||||||||| |  |||| |  ||||| ||||| |||||||||||||||||||||||| | || |    
T  2662470 ccaaacattcttgccattccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 2662569  T
Q  155 ttgaatcttgatgaagata 173  Q
    ||||||||  |||||||||    
T  2662570 ttgaatctctatgaagata 2662588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 2682025 - 2682069
Alignment:
Q  55 ccaaatattctagccataccaaaatctgagattttgggattcatt 99  Q
    ||||||||||||||||| ||||| ||||| ||||| |||||||||    
T  2682025 ccaaatattctagccatcccaaagtctgatatttttggattcatt 2682069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 15697353 - 15697420
Alignment:
Q  73 ccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctctatg 140  Q
    ||||||||||| ||||| ||||||||| || |||| || ||||| ||||||||||| |||||||||||    
T  15697353 ccaaaatctgatattttcggattcatttcatcatccagaagaacattgctggctttcagatctctatg 15697420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 15799843 - 15799924
Alignment:
Q  56 caaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctct 137  Q
    ||||| |||| ||||  ||||||||||| ||||| ||||||||| || |||| || ||||| ||||||||||| ||||||||    
T  15799843 caaatgttcttgccaatccaaaatctgatatttttggattcatttcatcatccagaagaacattgctggctttcagatctct 15799924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 15692677 - 15692749
Alignment:
Q  73 ccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctctatgaatta 145  Q
    ||||||||||| ||||||||||||||| ||  ||| |  ||||| ||||| ||||| ||||||||||||||||    
T  15692677 ccaaaatctgatattttgggattcatttcatgatctaatagaacattgctagctttgagatctctatgaatta 15692749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 15703715 - 15703799
Alignment:
Q  56 caaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctctatg 140  Q
    ||||| |||| ||||  ||||||||||| ||||| ||||||||| || |||| || |||||||||| |||||| || ||||||||    
T  15703715 caaattttcttgccaatccaaaatctgatatttttggattcatttcatcatctagaagaacgttgcaggctttaaggtctctatg 15703799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 15722546 - 15722626
Alignment:
Q  56 caaatattctagccataccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctc 136  Q
    ||||| |||| |||| |||||||||||| ||||| ||||||||| ||   || || ||||||||||||||||| |||||||    
T  15722546 caaattttcttgccaaaccaaaatctgatatttttggattcatttcactgtccagaagaacgttgctggctttcagatctc 15722626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 15805392 - 15805456
Alignment:
Q  73 ccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctct 137  Q
    ||||||||||| ||||| ||||||||| || |||| || ||||| ||||||||||| ||||||||    
T  15805392 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctct 15805456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 23560564 - 23560634
Alignment:
Q  133 tctctatgaattattttcagccttgaatcttgatgaagatataaaacacctcgagcaatcccacaaataat 203  Q
    ||||||||||||||  |||| || ||||||||||||||||| | || |||||| ||||| || ||||||||    
T  23560564 tctctatgaattatcctcagtctagaatcttgatgaagataaagaagacctcgggcaattccgcaaataat 23560634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 13855213 - 13855176
Alignment:
Q  61 attctagccataccaaaatctgagattttgggattcat 98  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  13855213 attctagccataccaaaatctgaaattttgggattcat 13855176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 8284 - 8321
Alignment:
Q  61 attctagccataccaaaatctgagattttgggattcat 98  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  8284 attctagccatgccaaaatctgaaattttgggattcat 8321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 47607412 - 47607375
Alignment:
Q  61 attctagccataccaaaatctgagattttgggattcat 98  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  47607412 attctagccatgccaaaatctgagattttaggattcat 47607375  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 47287703 - 47287663
Alignment:
Q  55 ccaaatattctagccataccaaaatctgagattttgggatt 95  Q
    ||||||||||| ||||| ||||||||||| |||||||||||    
T  47287703 ccaaatattcttgccatcccaaaatctgaaattttgggatt 47287663  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 20168090 - 20168134
Alignment:
Q  53 ctccaaatattctagccataccaaaatctgagattttgggattca 97  Q
    ||||||| ||||||||||||||||| ||||| ||||| |||||||    
T  20168090 ctccaaagattctagccataccaaattctgatatttttggattca 20168134  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 20231601 - 20231557
Alignment:
Q  53 ctccaaatattctagccataccaaaatctgagattttgggattca 97  Q
    ||||||| ||||||||||||||||| ||||| ||||| |||||||    
T  20231601 ctccaaagattctagccataccaaagtctgatatttttggattca 20231557  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 20243666 - 20243622
Alignment:
Q  53 ctccaaatattctagccataccaaaatctgagattttgggattca 97  Q
    |||||||||||||||||| |||||| ||||| ||||| |||||||    
T  20243666 ctccaaatattctagccagaccaaagtctgatatttttggattca 20243622  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 20264060 - 20264016
Alignment:
Q  53 ctccaaatattctagccataccaaaatctgagattttgggattca 97  Q
    ||||||| ||||||||||||||||| ||||| ||||| |||||||    
T  20264060 ctccaaagattctagccataccaaagtctgatatttttggattca 20264016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 20279569 - 20279525
Alignment:
Q  53 ctccaaatattctagccataccaaaatctgagattttgggattca 97  Q
    ||||||| ||||||||||||||||| ||||| ||||| |||||||    
T  20279569 ctccaaagattctagccataccaaagtctgatatttttggattca 20279525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 20289302 - 20289266
Alignment:
Q  61 attctagccataccaaaatctgagattttgggattca 97  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  20289302 attctagccataccaaagtctgatattttgggattca 20289266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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