View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0219_high_6 (Length: 385)
Name: NF0219_high_6
Description: NF0219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0219_high_6 |
 | |
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| [»] scaffold0150 (1 HSPs) |
| | |
|
| [»] scaffold0050 (1 HSPs) |
| | |
|
| [»] scaffold0029 (2 HSPs) |
| | |
|
| [»] scaffold0290 (1 HSPs) |
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| [»] scaffold0167 (1 HSPs) |
| | |
|
| [»] scaffold0027 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
| [»] scaffold0253 (2 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0085 (1 HSPs) |
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| [»] scaffold0039 (1 HSPs) |
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| [»] scaffold0028 (1 HSPs) |
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| [»] scaffold0755 (1 HSPs) |
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| [»] scaffold0378 (3 HSPs) |
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| [»] scaffold0094 (2 HSPs) |
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| [»] scaffold0068 (2 HSPs) |
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| [»] scaffold1922 (1 HSPs) |
| | |
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| [»] scaffold0473 (1 HSPs) |
| | |
|
| [»] scaffold0441 (1 HSPs) |
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| [»] scaffold0351 (1 HSPs) |
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| [»] scaffold0328 (1 HSPs) |
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| [»] scaffold0320 (1 HSPs) |
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| [»] scaffold0101 (1 HSPs) |
| | |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
| | |
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| [»] scaffold0630 (1 HSPs) |
| | |
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| [»] scaffold0505 (1 HSPs) |
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| [»] scaffold1719 (1 HSPs) |
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| [»] scaffold0605 (1 HSPs) |
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| [»] scaffold0503 (2 HSPs) |
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| [»] scaffold0183 (1 HSPs) |
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| [»] scaffold0132 (1 HSPs) |
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| [»] scaffold0104 (1 HSPs) |
| | |
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| [»] scaffold0032 (1 HSPs) |
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|
Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-134; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 53 - 356
Target Start/End: Original strand, 15999845 - 16000148
Alignment:
| Q |
53 |
gggtataaggaatgtgtccacgatcaccgtggacaacgcttcctctaatgatgtggctgttggttatttgnnnnnnngacttaagatcaagaatgagttg |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
15999845 |
gggtataaggaatgtgtccacgatcaccgtggacaacgcttcctctaatgatgtaactgttggttatttgaaaaaaagacttaagatcaagaatgggttg |
15999944 |
T |
|
| Q |
153 |
ttgggtgaaggggatcacttccatatgaggtgtgttgcccatatattgaacttagtagtcatggacgggttgaaagatcaagatctatctattgctagca |
252 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
15999945 |
ttgggtgaaggggatcacttccatatgaggtgtgttgcccatatattgaacttagtagtcatggacgggttgaaagatcaagatatgtctattgctagca |
16000044 |
T |
|
| Q |
253 |
tccgcaatgcggttaggtttgtgaggttttcacctcagagagctttgaaatttaaagaatgcattgatatgtcaaggataacatgtaagaaacatgtttg |
352 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16000045 |
tccgcaatgcggttaggtttgtgaggtcttcacctcaaagagctttgaaatttcaagaatacattgatatgtcaaggataacatgtaaaaaacatgtttg |
16000144 |
T |
|
| Q |
353 |
tctt |
356 |
Q |
| |
|
|||| |
|
|
| T |
16000145 |
tctt |
16000148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 1961673 - 1961637
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1961673 |
tcagtggggccttaggtcaaaaattggggtatgacag |
1961637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 2336087 - 2336123
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2336087 |
tcagtggggccttaggtcaaaaattggggtatgacag |
2336123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 19367510 - 19367474
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19367510 |
tcagtggggccttaggtcaaaaattggggtatgacag |
19367474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 16884553 - 16884518
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
16884553 |
tcagtggggccttaggtcaaaaattggggtatgaca |
16884518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 22116381 - 22116416
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
22116381 |
tcagtggggccttaggtcaaaaattggggtatgaca |
22116416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 35070070 - 35070035
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
35070070 |
tcagtggggccttaggtcaaaaattggggtatgaca |
35070035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 20429388 - 20429353
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
20429388 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
20429353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 22840179 - 22840214
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22840179 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
22840214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 18098408 - 18098375
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
18098408 |
agtggggccttaggttaaaaattggggtatgaca |
18098375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 5624232 - 5624268
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
5624232 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
5624268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 22570924 - 22570960
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
22570924 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
22570960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 20)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 53 - 356
Target Start/End: Complemental strand, 6838964 - 6838661
Alignment:
| Q |
53 |
gggtataaggaatgtgtccacgatcaccgtggacaacgcttcctctaatgatgtggctgttggttatttgnnnnnnngacttaagatcaagaatgagttg |
152 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||| |
|
|
| T |
6838964 |
gggtataagaaatgtgtccacgatcaccgttgacaacgcttcctctaatgatgtggctgttagttatttgaaacaaagacttaagatcaagaatgggttg |
6838865 |
T |
|
| Q |
153 |
ttgggtgaaggggatcacttccatatgaggtgtgttgcccatatattgaacttagtagtcatggacgggttgaaagatcaagatctatctattgctagca |
252 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| |
|
|
| T |
6838864 |
ttgggtgaaggagatcacttccatatgaggtgtgttgcccatatattgaacttagtagtcatggacgggttgaaagatcaagatttgtctatttctagca |
6838765 |
T |
|
| Q |
253 |
tccgcaatgcggttaggtttgtgaggttttcacctcagagagctttgaaatttaaagaatgcattgatatgtcaaggataacatgtaagaaacatgtttg |
352 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6838764 |
tccgcaatgcggttaggtttgtgaggtcttcacctcaaagagctttgaaatttaaagaatgcattgatatgtcaaggataacatgtaaaaaacatgtttg |
6838665 |
T |
|
| Q |
353 |
tctt |
356 |
Q |
| |
|
|||| |
|
|
| T |
6838664 |
tctt |
6838661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 20639878 - 20639929
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20639878 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag |
20639929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 25526237 - 25526187
Alignment:
| Q |
3 |
tcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25526237 |
tcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag |
25526187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 20092783 - 20092819
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20092783 |
tcagtggggccttaggtcaaaaattggggtatgacag |
20092819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 26186664 - 26186712
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatga |
50 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26186664 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatga |
26186712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 25532918 - 25532867
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
25532918 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattgggatatgacag |
25532867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 36448284 - 36448249
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
36448284 |
tcagtggggccttaggtcaaaaattggggtatgaca |
36448249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 20099682 - 20099715
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
20099682 |
agtggggccttaggtcaaaaattggggtatgaca |
20099715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 21696107 - 21696071
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
21696107 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
21696071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 26553296 - 26553332
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26553296 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
26553332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 29901264 - 29901228
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
29901264 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
29901228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 21688188 - 21688153
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21688188 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
21688153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 23378331 - 23378366
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |
|
|
| T |
23378331 |
tcagtggggccttaggtcaaaaattgaggtatgaca |
23378366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Complemental strand, 36454655 - 36454626
Alignment:
| Q |
24 |
ggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
36454655 |
ggccttaggtcaaaaattggggtatgacag |
36454626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 7794323 - 7794287
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
7794323 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
7794287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 12387282 - 12387318
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
12387282 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
12387318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 15779774 - 15779810
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
15779774 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
15779810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 17961909 - 17961873
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
17961909 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
17961873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 23577474 - 23577506
Alignment:
| Q |
21 |
tggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
23577474 |
tgggaccttaggtcaaaaattggggtatgacag |
23577506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 31525365 - 31525329
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
31525365 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
31525329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 130 - 339
Target Start/End: Original strand, 7285281 - 7285480
Alignment:
| Q |
130 |
gacttaagatcaagaatgagttgttgggtgaaggggatcacttccatatgaggtgtgttgcccatatattgaacttagtagtcatggacgggttgaaaga |
229 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7285281 |
gacttaagatcaagaatgggttgttgggtgaaggagatcatttccatatgaagtgtcttgcccatatattgaacttagtagtcatggacgggttgaaaga |
7285380 |
T |
|
| Q |
230 |
tcaagatctatctattgctagcatccgcaatgcggttaggtttgtgaggttttcacctcagagagctttgaaatttaaagaatgcattgatatgtcaagg |
329 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||| |||||||||||| | ||||||||| |
|
|
| T |
7285381 |
tcaagat----------ctagcatccgcaatgcagttaggtttgtgaggtcttcacctcaaagagctttaaaatgtaaagaatgcatcaaaatgtcaagg |
7285470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3382460 - 3382511
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3382460 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag |
3382511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 39745436 - 39745486
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
39745436 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca |
39745486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 3389209 - 3389258
Alignment:
| Q |
3 |
tcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3389209 |
tcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca |
3389258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 19738039 - 19738074
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
19738039 |
tcagtggggccttaggtcaaaaattggggtatgaca |
19738074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 20548416 - 20548381
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
20548416 |
tcagtggggccttaggtcaaaaattggggtatgaca |
20548381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 20555040 - 20555005
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
20555040 |
tcagtggggccttaggtcaaaaattggggtatgaca |
20555005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 22175868 - 22175903
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
22175868 |
tcagtggggccttaggtcaaaaattggggtatgaca |
22175903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 50187818 - 50187783
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
50187818 |
tcagtggggccttaggtcaaaaattggggtatgaca |
50187783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 13100705 - 13100669
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |
|
|
| T |
13100705 |
tcagtggggccttaggtcaaaatttggggtatgacag |
13100669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 15880075 - 15880111
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
15880075 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
15880111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 55793259 - 55793294
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
55793259 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
55793294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 16720806 - 16720842
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
16720806 |
tcagtcgggtcttaggtcaaaaattggggtatgacag |
16720842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 26)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 154 - 337
Target Start/End: Original strand, 13307531 - 13307714
Alignment:
| Q |
154 |
tgggtgaaggggatcacttccatatgaggtgtgttgcccatatattgaacttagtagtcatggacgggttgaaagatcaagatctatctattgctagcat |
253 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| || || ||||||||||| || || |||||||| || || ||||||||| | |||||| ||||||| |
|
|
| T |
13307531 |
tgggtgaaggggatcacttgcatatgaggtgtgtagcacacatattgaacttggttgtaatggacggcttaaaggatcaagatttgtctatttctagcat |
13307630 |
T |
|
| Q |
254 |
ccgcaatgcggttaggtttgtgaggttttcacctcagagagctttgaaatttaaagaatgcattgatatgtcaaggataacatg |
337 |
Q |
| |
|
||||||||| ||||||||||| || | |||||| || ||||||| ||||| ||||||||||| || ||||||||||||||||| |
|
|
| T |
13307631 |
ccgcaatgctgttaggtttgttagatcttcaccacaaagagcttcaaaattcaaagaatgcatagaaatgtcaaggataacatg |
13307714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 337
Target Start/End: Complemental strand, 14596345 - 14596162
Alignment:
| Q |
154 |
tgggtgaaggggatcacttccatatgaggtgtgttgcccatatattgaacttagtagtcatggacgggttgaaagatcaagatctatctattgctagcat |
253 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||| || || ||||||||||| ||||| ||||||| || || ||||||||| | |||||| |||||| |
|
|
| T |
14596345 |
tgggtgaagggggtcacttgcatatgaggtgtgtagcacacatattgaacttggtagtactggacggcttaaaggatcaagatttgtctatttttagcat |
14596246 |
T |
|
| Q |
254 |
ccgcaatgcggttaggtttgtgaggttttcacctcagagagctttgaaatttaaagaatgcattgatatgtcaaggataacatg |
337 |
Q |
| |
|
||||||||| ||||||||||| || | |||||| || ||||| | ||||| ||||||||||| || |||||||||||| |||| |
|
|
| T |
14596245 |
ccgcaatgctgttaggtttgttagatcttcaccacaaagagcatcaaaattcaaagaatgcatagaaatgtcaaggatagcatg |
14596162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 19719886 - 19719835
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19719886 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgacag |
19719835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 19713730 - 19713680
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19713730 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca |
19713680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 18961027 - 18961063
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18961027 |
tcagtggggccttaggtcaaaaattggggtatgacag |
18961063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 12667568 - 12667603
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
12667568 |
tcagtggggccttaggtcaaaaattggggtatgaca |
12667603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 26896502 - 26896467
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
26896502 |
tcagtggggccttaggtcaaaaattggggtatgaca |
26896467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 28702918 - 28702953
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
28702918 |
tcagtggggccttaggtcaaaaattggggtatgaca |
28702953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 19169141 - 19169105
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19169141 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
19169105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 19898984 - 19898948
Alignment:
| Q |
18 |
cagtggggccttaggtcaaaaattggggtatgacagg |
54 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19898984 |
cagtggggccttaggtcaaaaatttgggtatgacagg |
19898948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 20452688 - 20452724
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20452688 |
tcagtggagccttaggtcaaaaattggggtatgacag |
20452724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 24143596 - 24143632
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
24143596 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
24143632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 20058868 - 20058903
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
20058868 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
20058903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 52
Target Start/End: Original strand, 20459493 - 20459524
Alignment:
| Q |
21 |
tggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
20459493 |
tggggccttaggtcaaaaattggggtatgaca |
20459524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 22779170 - 22779205
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22779170 |
tcagtggggcattaggtcaaaaattggggtatgaca |
22779205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 24150086 - 24150121
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24150086 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
24150121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 1549236 - 1549202
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |
|
|
| T |
1549236 |
agtgggaccttaggtcaaaaattggggtatgacag |
1549202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 14176973 - 14176931
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggg |
44 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
14176973 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggg |
14176931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 17784086 - 17784136
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| ||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
17784086 |
gtcgagtgacatgtgtcagtggagccttaggtcaaaaattggtgtatgaca |
17784136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 15666297 - 15666330
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |
|
|
| T |
15666297 |
agtgggcccttaggtcaaaaattggggtatgaca |
15666330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 16816887 - 16816923
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
16816887 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
16816923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 16825642 - 16825678
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
16825642 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
16825678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 20051005 - 20051041
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
20051005 |
tcagtgggaacttaggtcaaaaattggggtatgacag |
20051041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 21750688 - 21750720
Alignment:
| Q |
20 |
gtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
21750688 |
gtggggtcttaggtcaaaaattggggtatgaca |
21750720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 22631729 - 22631693
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||| |
|
|
| T |
22631729 |
tcagtgtgaccttaggtcaaaaattggggtatgacag |
22631693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 27517345 - 27517309
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
27517345 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
27517309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 80 - 337
Target Start/End: Complemental strand, 21282954 - 21282696
Alignment:
| Q |
80 |
cgtggacaacgcttcctctaatgatgtggctgttggttatttgnnnnnnngacttaagatcaagaatgagttgttgggtgaaggggatcacttccatatg |
179 |
Q |
| |
|
||||||||||||||| || |||||||||| ||| |||||| ||||||||| ||||||| ||| ||||||||| |||||||| |||||| |
|
|
| T |
21282954 |
cgtggacaacgcttcttcgaatgatgtggttgtctcttatttaaaaagaagacttaagaacaagaattggttaatgggtgaagatgatcactttcatatg |
21282855 |
T |
|
| Q |
180 |
aggtgtgttgcccatatattgaacttagtagtcatggacgggttgaaagatcaagatctatctattgctagcatccgc-aatgcggttaggtttgtgagg |
278 |
Q |
| |
|
|||||||| || | ||||||||||| ||||| |||| || || || ||||||||| | |||||| ||||||| ||| |||| |||||||||| || |
|
|
| T |
21282854 |
aggtgtgtggcatacatattgaacttggtagtaatgggcgacttaaatgatcaagatttgtctatttctagcattcgcaaatgtttttaggtttgttaga |
21282755 |
T |
|
| Q |
279 |
ttttcacctcagagagctttgaaatttaaagaatgcattgatatgtcaaggataacatg |
337 |
Q |
| |
|
|||||||| | ||||| || ||||| ||||||||||| || || |||||||||||||| |
|
|
| T |
21282754 |
ttttcaccacgaagagcattaaaattcaaagaatgcatagaaatctcaaggataacatg |
21282696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 1858582 - 1858632
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
1858582 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca |
1858632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 34132852 - 34132888
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34132852 |
tcagtggggccttaggtcaaaaattggggtatgacag |
34132888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 15683187 - 15683149
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacaggg |
55 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
15683187 |
tcagtgggaccttaggtcaaaaattggggtatgacaggg |
15683149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 18779080 - 18779130
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18779080 |
gtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca |
18779130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 43906134 - 43906101
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatga |
50 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
43906134 |
tcagtggggccttaggtcaaaaattggggtatga |
43906101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 42631289 - 42631325
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
42631289 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
42631325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 22346902 - 22346867
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22346902 |
tcagtggggccttaggacaaaaattggggtatgaca |
22346867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 13270903 - 13270953
Alignment:
| Q |
3 |
tcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13270903 |
tcgagtgacatgtgtcagtggggccttaggtcaaaaattggaatatgacag |
13270953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 15767139 - 15767173
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |
|
|
| T |
15767139 |
agtgggaccttaggtcaaaaattggggtatgacag |
15767173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 28415200 - 28415150
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||| |||||||||||| |||||||||||||||||| |
|
|
| T |
28415200 |
gtcgagtgacatgtgtcagcggggccttaggtaaaaaattggggtatgaca |
28415150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 17016388 - 17016421
Alignment:
| Q |
21 |
tggggccttaggtcaaaaattggggtatgacagg |
54 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
17016388 |
tgggaccttaggtcaaaaattggggtatgacagg |
17016421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 4847205 - 4847169
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
4847205 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
4847169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 9474270 - 9474234
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
9474270 |
tcagtggagccttaggtcaaaatttggggtatgacag |
9474234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 34363171 - 34363207
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
34363171 |
tcagtggggtcttgggtcaaaaattggggtatgacag |
34363207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0150
Description:
Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 38614 - 38664
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
38614 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca |
38664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 27731 - 27781
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
27731 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca |
27781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 36735383 - 36735333
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
36735383 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca |
36735333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 38084483 - 38084533
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
38084483 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattggggtatgaca |
38084533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 18319 - 18354
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
18319 |
tcagtggggccttaggtcaaaaattggggtatgaca |
18354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 5871126 - 5871177
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||| ||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5871126 |
gtcgagtgatatgtgtcagtgggcccttaggtcaaaaattggggtatgacag |
5871177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 20279362 - 20279397
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
20279362 |
tcagtggggccttaggtcaaaaattggggtatgaca |
20279397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 18500261 - 18500225
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18500261 |
tcagtggggccttagatcaaaaattggggtatgacag |
18500225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 11873717 - 11873682
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
11873717 |
tcagtggggtcttaggtcaaaaattggggtatgaca |
11873682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 22518993 - 22519028
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22518993 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
22519028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 5874267 - 5874317
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5874267 |
gtcgagtgacatgtgtcagtggacccttaggtcaaaaattggggtatgaca |
5874317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 21064721 - 21064685
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
21064721 |
tcagtgggaccttaggtaaaaaattggggtatgacag |
21064685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 38103 - 38139
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38103 |
tcagtggggccttaggtcaaaaattggggtatgacag |
38139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 33988 - 33952
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
33988 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
33952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 30)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 4313625 - 4313661
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4313625 |
tcagtggggccttaggtcaaaaattggggtatgacag |
4313661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 261399 - 261364
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
261399 |
tcagtggggccttaggtcaaaaattggggtatgaca |
261364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 13111817 - 13111852
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
13111817 |
tcagtggggccttaggtcaaaaattggggtatgaca |
13111852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 14893176 - 14893211
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
14893176 |
tcagtggggccttaggtcaaaaattggggtatgaca |
14893211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 16031289 - 16031324
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
16031289 |
tcagtggggccttaggtcaaaaattggggtatgaca |
16031324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 21638591 - 21638626
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
21638591 |
tcagtggggccttaggtcaaaaattggggtatgaca |
21638626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 11180810 - 11180760
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11180810 |
gtcgagtgacatgtgtcagtggggccttaggttaaaaattggggtatgaca |
11180760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 12550461 - 12550412
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgac |
51 |
Q |
| |
|
||||||||| ||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
12550461 |
gtcgagtgacatgtgtcactggggccttaggtcaaaaattggggtatgac |
12550412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 14881348 - 14881381
Alignment:
| Q |
20 |
gtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
14881348 |
gtggggccttaggtcaaaaattggggtatgacag |
14881381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 23288154 - 23288187
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
23288154 |
agtggggccttaggtcaaaaattggggtatgaca |
23288187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 13105669 - 13105705
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
13105669 |
tcagtggggccttaggtcaaaaattagggtatgacag |
13105705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 33814597 - 33814633
Alignment:
| Q |
16 |
atcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
33814597 |
atcagtgggaccttaggtcaaaaattggggtatgaca |
33814633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 74272 - 74237
Alignment:
| Q |
18 |
cagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
74272 |
cagtggggcgttaggtcaaaaattggggtatgacag |
74237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 3404787 - 3404752
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3404787 |
tcagtggggccttaggtaaaaaattggggtatgaca |
3404752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 8612672 - 8612621
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||| ||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8612672 |
gtcgagtgacatgtctcagtgggctcttaggtcaaaaattggggtatgacag |
8612621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 14888071 - 14888106
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| |
|
|
| T |
14888071 |
tcagtggagccttaggtcaaaaattggggtatgaca |
14888106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 15610519 - 15610554
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15610519 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
15610554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 18706302 - 18706267
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
18706302 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
18706267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 30102471 - 30102518
Alignment:
| Q |
6 |
agtgagatgaatcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||| ||| ||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
30102471 |
agtgacatgtatcagtggggccttaagtcaaaaattgggatatgacag |
30102518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 50
Target Start/End: Complemental strand, 37470172 - 37470141
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatga |
50 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
37470172 |
agtggggccttaggtcaaaaattggggtatga |
37470141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 48060760 - 48060795
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |
|
|
| T |
48060760 |
tcagtgaggccttaggtcaaaaattggggtatgaca |
48060795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 49967389 - 49967354
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |
|
|
| T |
49967389 |
tcagtggggccttaggtcaaaaattagggtatgaca |
49967354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 68179 - 68145
Alignment:
| Q |
18 |
cagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
68179 |
cagtggggcgttaggtcaaaaattggggtatgaca |
68145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 8606212 - 8606162
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
8606212 |
gtcgagtgacatgtttcagtgggctcttaggtcaaaaattggggtatgaca |
8606162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 13086587 - 13086554
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |
|
|
| T |
13086587 |
agtgggaccttaggtcaaaaattggggtatgaca |
13086554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 5651854 - 5651890
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
5651854 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
5651890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 8812638 - 8812602
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
8812638 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
8812602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 15529072 - 15529108
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
15529072 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
15529108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 15579469 - 15579505
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
15579469 |
tcagtgggaccttaggtcaaaaactggggtatgacag |
15579505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 46385334 - 46385298
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
46385334 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
46385298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0290
Description:
Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 22081 - 22046
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
22081 |
tcagtggggccttaggtcaaaaattggggtatgaca |
22046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0167 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0167
Description:
Target: scaffold0167; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 8015 - 7980
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
8015 |
tcagtggggccttaggtcaaaaattggggtatgaca |
7980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 23618 - 23583
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
23618 |
tcagtggggccttaggtcaaaaattggggtatgaca |
23583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 96817 - 96782
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
96817 |
tcagtggggccttaggtcaaaaattggggtatgaca |
96782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 14891892 - 14891927
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
14891892 |
tcagtggggccttaggtcaaaaattggggtatgaca |
14891927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 15061366 - 15061401
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
15061366 |
tcagtggggccttaggtcaaaaattggggtatgaca |
15061401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 25859306 - 25859340
Alignment:
| Q |
18 |
cagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
25859306 |
cagtggggccttaggtcaaaaattggggtatgaca |
25859340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 32025670 - 32025719
Alignment:
| Q |
3 |
tcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
32025670 |
tcgagtgacatgtgtcagtggggtcttaggtcaaaaattggggtatgaca |
32025719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 20733191 - 20733159
Alignment:
| Q |
21 |
tggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
20733191 |
tggggccttaggtcaaaaattggggtatgacag |
20733159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 22163017 - 22163052
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22163017 |
tcagtgggcccttaggtcaaaaattggggtatgaca |
22163052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 24487946 - 24487981
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24487946 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
24487981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 45469509 - 45469474
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |
|
|
| T |
45469509 |
tcagtgaggccttaggtcaaaaattggggtatgaca |
45469474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 22157010 - 22157044
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |
|
|
| T |
22157010 |
agtgggcccttaggtcaaaaattggggtatgacag |
22157044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 6030883 - 6030846
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacagg |
54 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
6030883 |
tcagtgggaccttaggtcaaaaattggggtaagacagg |
6030846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0253 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0253
Description:
Target: scaffold0253; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 10389 - 10339
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10389 |
gtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca |
10339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0253; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 19814 - 19764
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19814 |
gtcgagtgacatgtgtcagcggggccttaggtcaaaaattggggtatgaca |
19764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 86712 - 86762
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
86712 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattagggtatgaca |
86762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0085
Description:
Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 7831 - 7864
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
7831 |
agtggggccttaggtcaaaaattggggtatgaca |
7864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 89904 - 89937
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatga |
50 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
89904 |
tcagtggggccttaggtcaaaaattggggtatga |
89937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 65871 - 65838
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
65871 |
agtggggccttaggtcaaaaattggggtatgaca |
65838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0755 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0755
Description:
Target: scaffold0755; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 998 - 962
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |
|
|
| T |
998 |
tcagtggggccttaggtcaaaatttggggtatgacag |
962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0378 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0378
Description:
Target: scaffold0378; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 805 - 769
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
805 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0378; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 3371 - 3336
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3371 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
3336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0378; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 15851 - 15816
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15851 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
15816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0094 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0094
Description:
Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 30730 - 30766
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
30730 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
30766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0094; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 41697 - 41731
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |
|
|
| T |
41697 |
agtgggaccttaggtcaaaaattggggtatgacag |
41731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 17803 - 17839
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |
|
|
| T |
17803 |
tcagtgggaccttaggtcaaaaattggggtatgacag |
17839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 25722 - 25757
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
25722 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
25757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1922 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1922
Description:
Target: scaffold1922; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 246 - 281
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |
|
|
| T |
246 |
tcagtggggcattaggtcaaaaattggggtatgaca |
281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0473 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0473
Description:
Target: scaffold0473; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 9193 - 9228
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9193 |
tcagtgaggccttaggtcaaaaattggggtatgaca |
9228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0441 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0441
Description:
Target: scaffold0441; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 2506 - 2471
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2506 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
2471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0351 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0351
Description:
Target: scaffold0351; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 7671 - 7706
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |
|
|
| T |
7671 |
tcagtggggccttaggtcaaaaattagggtatgaca |
7706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0328 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0328
Description:
Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 207 - 242
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |
|
|
| T |
207 |
tcagtgaggccttaggtcaaaaattggggtatgaca |
242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0320 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0320
Description:
Target: scaffold0320; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 6351 - 6386
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6351 |
tcagtggggccttaggacaaaaattggggtatgaca |
6386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0101
Description:
Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 16568 - 16603
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16568 |
tcagtgggaccttaggtcaaaaattggggtatgaca |
16603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 14134 - 14099
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |
|
|
| T |
14134 |
tcagtggggccttaggtcaaaaattgaggtatgaca |
14099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 3799 - 3765
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |
|
|
| T |
3799 |
agtgggcccttaggtcaaaaattggggtatgacag |
3765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0630 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0630
Description:
Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 1393 - 1434
Alignment:
| Q |
2 |
gtcgagtgagatgaatcagtggggccttaggtcaaaaattgg |
43 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
1393 |
gtcgagtgacatgtgtcagtggggccttaggtcaaaaattgg |
1434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0505 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0505
Description:
Target: scaffold0505; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 11503 - 11470
Alignment:
| Q |
19 |
agtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |
|
|
| T |
11503 |
agtgggtccttaggtcaaaaattggggtatgaca |
11470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1719 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1719
Description:
Target: scaffold1719; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 21 - 57
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
21 |
tcagtgggaccttaggtcaaaatttggggtatgacag |
57 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0605 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0605
Description:
Target: scaffold0605; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 9368 - 9404
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9368 |
tcagtgggaacttaggtcaaaaattggggtatgacag |
9404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0503 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0503
Description:
Target: scaffold0503; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 1947 - 1983
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||| |
|
|
| T |
1947 |
tcagtgagaccttaggtcaaaaattggggtatgacag |
1983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0503; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 6514 - 6550
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||| |
|
|
| T |
6514 |
tcagtgagaccttaggtcaaaaattggggtatgacag |
6550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 20711 - 20679
Alignment:
| Q |
20 |
gtggggccttaggtcaaaaattggggtatgaca |
52 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |
|
|
| T |
20711 |
gtgggaccttaggtcaaaaattggggtatgaca |
20679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0132 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0132
Description:
Target: scaffold0132; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 24326 - 24298
Alignment:
| Q |
27 |
cttaggtcaaaaattggggtatgacaggg |
55 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
24326 |
cttaggtcaaaaattggggtatgacaggg |
24298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0104 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0104
Description:
Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 38569 - 38605
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
38569 |
tcagtgggaccttaggtcaaaaattcgggtatgacag |
38605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 29143 - 29179
Alignment:
| Q |
17 |
tcagtggggccttaggtcaaaaattggggtatgacag |
53 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
29143 |
tcagtgggaccttaggtcaaaaattggagtatgacag |
29179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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