View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0221_low_11 (Length: 246)

Name: NF0221_low_11
Description: NF0221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0221_low_11
NF0221_low_11
[»] chr6 (33 HSPs)
chr6 (6-213)||(34643274-34643481)
chr6 (33-209)||(19437392-19437568)
chr6 (33-209)||(19455413-19455589)
chr6 (7-211)||(21567680-21567884)
chr6 (33-213)||(24516129-24516309)
chr6 (7-213)||(14377605-14377811)
chr6 (33-213)||(8761469-8761647)
chr6 (21-211)||(15461724-15461914)
chr6 (7-213)||(18797076-18797282)
chr6 (75-213)||(24293539-24293677)
chr6 (75-213)||(29590196-29590334)
chr6 (75-213)||(2872560-2872698)
chr6 (75-213)||(16574276-16574414)
chr6 (75-213)||(16620966-16621104)
chr6 (7-213)||(21473986-21474192)
chr6 (7-213)||(10466537-10466744)
chr6 (75-213)||(25114938-25115076)
chr6 (111-213)||(22828148-22828250)
chr6 (104-204)||(25770239-25770339)
chr6 (75-213)||(27189822-27189960)
chr6 (75-213)||(27259280-27259418)
chr6 (111-213)||(27563626-27563728)
chr6 (75-213)||(28312016-28312154)
chr6 (33-132)||(24366867-24366966)
chr6 (111-213)||(19867073-19867175)
chr6 (117-213)||(16961281-16961377)
chr6 (94-213)||(28260973-28261092)
chr6 (94-213)||(28284824-28284943)
chr6 (94-213)||(28339722-28339841)
chr6 (111-209)||(21755322-21755420)
chr6 (108-168)||(16100446-16100506)
chr6 (147-213)||(24366798-24366864)
chr6 (37-205)||(23085490-23085658)
[»] scaffold0117 (1 HSPs)
scaffold0117 (6-209)||(3716-3919)
[»] scaffold2111 (1 HSPs)
scaffold2111 (6-213)||(133-340)
[»] chr7 (42 HSPs)
chr7 (6-213)||(19615187-19615394)
chr7 (7-213)||(15342943-15343149)
chr7 (33-213)||(13966225-13966405)
chr7 (7-213)||(14140191-14140397)
chr7 (7-213)||(16948003-16948209)
chr7 (33-213)||(14283931-14284111)
chr7 (33-213)||(15100160-15100340)
chr7 (33-213)||(13675964-13676143)
chr7 (33-213)||(16069854-16070034)
chr7 (33-213)||(26116147-26116327)
chr7 (36-213)||(26092358-26092535)
chr7 (36-213)||(49154813-49154990)
chr7 (9-213)||(11385962-11386166)
chr7 (33-213)||(21754924-21755104)
chr7 (7-209)||(18051484-18051686)
chr7 (33-213)||(14261802-14261982)
chr7 (60-213)||(11300797-11300950)
chr7 (75-213)||(14334907-14335045)
chr7 (75-213)||(44788972-44789110)
chr7 (33-166)||(12799058-12799191)
chr7 (75-213)||(8710116-8710254)
chr7 (75-213)||(10873201-10873339)
chr7 (111-213)||(14957065-14957167)
chr7 (75-213)||(15158678-15158816)
chr7 (75-213)||(18587792-18587930)
chr7 (98-213)||(11234857-11234972)
chr7 (10-197)||(19149539-19149726)
chr7 (10-197)||(20748938-20749125)
chr7 (111-213)||(9590879-9590981)
chr7 (7-132)||(12459221-12459346)
chr7 (39-211)||(12204363-12204535)
chr7 (81-213)||(18180256-18180388)
chr7 (111-213)||(11550759-11550861)
chr7 (75-213)||(13688552-13688690)
chr7 (75-157)||(8200615-8200697)
chr7 (111-213)||(12690013-12690115)
chr7 (7-121)||(13023949-13024063)
chr7 (111-213)||(16727040-16727142)
chr7 (111-213)||(17704112-17704214)
chr7 (111-213)||(14150093-14150194)
chr7 (147-213)||(13023869-13023935)
chr7 (111-181)||(48812909-48812979)
[»] scaffold0029 (2 HSPs)
scaffold0029 (6-213)||(115113-115320)
scaffold0029 (21-211)||(94455-94645)
[»] chr3 (55 HSPs)
chr3 (6-213)||(13969891-13970098)
chr3 (6-213)||(14088824-14089031)
chr3 (11-213)||(24189455-24189657)
chr3 (33-213)||(31941054-31941234)
chr3 (21-213)||(13318288-13318480)
chr3 (33-213)||(18132144-18132324)
chr3 (7-213)||(17188525-17188731)
chr3 (33-213)||(11949706-11949886)
chr3 (33-213)||(31692983-31693163)
chr3 (7-213)||(16832300-16832506)
chr3 (39-213)||(17493797-17493971)
chr3 (33-213)||(12180495-12180675)
chr3 (7-213)||(13944175-13944381)
chr3 (24-213)||(16327498-16327687)
chr3 (33-213)||(12358325-12358505)
chr3 (21-213)||(12510269-12510461)
chr3 (21-211)||(10417831-10418021)
chr3 (7-213)||(44779398-44779604)
chr3 (61-213)||(16378755-16378907)
chr3 (39-213)||(14291336-14291510)
chr3 (36-213)||(28756470-28756647)
chr3 (49-213)||(12272489-12272653)
chr3 (39-213)||(16826085-16826259)
chr3 (36-213)||(10408119-10408296)
chr3 (36-213)||(47126095-47126272)
chr3 (49-213)||(14575137-14575301)
chr3 (75-213)||(13254831-13254969)
chr3 (49-211)||(15229756-15229918)
chr3 (49-211)||(15235624-15235786)
chr3 (75-213)||(16637914-16638052)
chr3 (75-213)||(26791264-26791402)
chr3 (75-213)||(43164816-43164954)
chr3 (7-213)||(8745162-8745368)
chr3 (75-213)||(12888850-12888988)
chr3 (75-213)||(15346096-15346234)
chr3 (75-213)||(15587243-15587381)
chr3 (75-213)||(20059905-20060043)
chr3 (75-213)||(48427588-48427726)
chr3 (90-213)||(10007741-10007864)
chr3 (90-213)||(10908351-10908474)
chr3 (98-213)||(15400391-15400506)
chr3 (75-213)||(5422781-5422919)
chr3 (75-213)||(15713907-15714045)
chr3 (111-213)||(16694305-16694407)
chr3 (111-213)||(3688084-3688186)
chr3 (111-213)||(6602877-6602979)
chr3 (111-213)||(14874455-14874557)
chr3 (75-213)||(16754552-16754690)
chr3 (98-213)||(15358224-15358339)
chr3 (75-213)||(53382869-53383007)
chr3 (111-213)||(24185331-24185433)
chr3 (111-213)||(16804834-16804936)
chr3 (7-132)||(11958953-11959078)
chr3 (114-205)||(14579298-14579389)
chr3 (108-169)||(15948354-15948415)
[»] chr5 (37 HSPs)
chr5 (6-213)||(21676559-21676766)
chr5 (21-211)||(28892682-28892872)
chr5 (33-213)||(20344718-20344898)
chr5 (7-213)||(23078631-23078837)
chr5 (33-211)||(28921520-28921698)
chr5 (36-213)||(24796152-24796329)
chr5 (33-213)||(22505115-22505295)
chr5 (37-213)||(25850511-25850687)
chr5 (36-213)||(14884746-14884923)
chr5 (24-196)||(20823906-20824078)
chr5 (49-213)||(590-754)
chr5 (33-213)||(17267086-17267266)
chr5 (33-213)||(23563920-23564100)
chr5 (75-213)||(27520860-27520998)
chr5 (60-213)||(37541160-37541313)
chr5 (75-213)||(16358956-16359094)
chr5 (75-213)||(34568948-34569086)
chr5 (75-213)||(41773296-41773434)
chr5 (21-181)||(20778381-20778541)
chr5 (90-213)||(22330696-22330819)
chr5 (75-213)||(19772414-19772552)
chr5 (75-213)||(22350373-22350511)
chr5 (75-213)||(27666284-27666422)
chr5 (75-213)||(29473867-29474005)
chr5 (75-213)||(37289290-37289428)
chr5 (75-213)||(40711234-40711372)
chr5 (33-213)||(22464387-22464566)
chr5 (75-213)||(27683194-27683332)
chr5 (75-213)||(14997533-14997671)
chr5 (111-213)||(22137122-22137224)
chr5 (75-213)||(27612808-27612948)
chr5 (10-166)||(22233649-22233805)
chr5 (10-213)||(21983906-21984109)
chr5 (111-213)||(18781568-18781670)
chr5 (51-210)||(21561795-21561954)
chr5 (111-213)||(20803051-20803153)
chr5 (75-160)||(21409641-21409726)
[»] scaffold0090 (1 HSPs)
scaffold0090 (6-213)||(21402-21609)
[»] scaffold0046 (2 HSPs)
scaffold0046 (7-214)||(79378-79585)
scaffold0046 (30-213)||(60290-60473)
[»] scaffold0420 (2 HSPs)
scaffold0420 (7-213)||(8165-8371)
scaffold0420 (7-213)||(1196-1402)
[»] chr8 (31 HSPs)
chr8 (7-213)||(22028267-22028473)
chr8 (33-213)||(16269237-16269417)
chr8 (49-213)||(21323308-21323472)
chr8 (36-213)||(28983499-28983676)
chr8 (36-213)||(28988718-28988895)
chr8 (7-213)||(22053450-22053657)
chr8 (51-213)||(19984768-19984930)
chr8 (9-213)||(31568832-31569036)
chr8 (21-208)||(27357129-27357316)
chr8 (10-213)||(21928016-21928219)
chr8 (75-213)||(19114988-19115126)
chr8 (75-213)||(20016318-20016456)
chr8 (75-213)||(17672077-17672216)
chr8 (102-213)||(22373457-22373568)
chr8 (75-213)||(22118230-22118368)
chr8 (75-213)||(22127014-22127152)
chr8 (111-213)||(30311235-30311337)
chr8 (18-136)||(31414530-31414648)
chr8 (111-213)||(15535971-15536073)
chr8 (111-213)||(18859165-18859267)
chr8 (75-213)||(19482127-19482265)
chr8 (111-213)||(19980555-19980657)
chr8 (111-213)||(21164629-21164731)
chr8 (111-213)||(32602733-32602835)
chr8 (111-205)||(19864184-19864278)
chr8 (108-181)||(20394221-20394294)
chr8 (96-211)||(20390676-20390791)
chr8 (111-169)||(21391952-21392010)
chr8 (111-169)||(21781278-21781336)
chr8 (111-169)||(21786446-21786504)
chr8 (111-213)||(22042415-22042517)
[»] scaffold0348 (2 HSPs)
scaffold0348 (7-212)||(18030-18235)
scaffold0348 (7-213)||(5396-5602)
[»] scaffold0028 (3 HSPs)
scaffold0028 (34-213)||(48088-48267)
scaffold0028 (94-213)||(53278-53397)
scaffold0028 (98-213)||(17489-17603)
[»] scaffold0114 (3 HSPs)
scaffold0114 (7-213)||(39609-39815)
scaffold0114 (157-213)||(22427-22483)
scaffold0114 (111-181)||(17992-18062)
[»] chr1 (26 HSPs)
chr1 (33-212)||(20833542-20833721)
chr1 (7-213)||(24097231-24097437)
chr1 (33-213)||(20296949-20297129)
chr1 (21-213)||(20854390-20854582)
chr1 (33-213)||(21953446-21953626)
chr1 (33-213)||(31537639-31537819)
chr1 (27-213)||(19856842-19857028)
chr1 (36-213)||(38910471-38910648)
chr1 (36-213)||(48425441-48425618)
chr1 (36-213)||(52988309-52988486)
chr1 (49-213)||(22016403-22016567)
chr1 (35-213)||(37679617-37679795)
chr1 (33-213)||(21739678-21739858)
chr1 (10-213)||(41311094-41311297)
chr1 (75-213)||(21832839-21832977)
chr1 (72-213)||(51331173-51331314)
chr1 (81-213)||(33388719-33388851)
chr1 (111-213)||(16348315-16348417)
chr1 (39-213)||(21743200-21743374)
chr1 (111-213)||(21839487-21839589)
chr1 (75-213)||(41351352-41351490)
chr1 (111-212)||(21233451-21233552)
chr1 (111-213)||(17042735-17042837)
chr1 (111-213)||(19108905-19109007)
chr1 (115-213)||(22503013-22503111)
chr1 (36-85)||(12200214-12200263)
[»] scaffold0404 (1 HSPs)
scaffold0404 (7-213)||(7295-7501)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-213)||(262777-262983)
[»] scaffold0011 (1 HSPs)
scaffold0011 (49-213)||(151118-151282)
[»] scaffold0118 (1 HSPs)
scaffold0118 (21-213)||(12-204)
[»] scaffold0034 (2 HSPs)
scaffold0034 (33-213)||(2526-2706)
scaffold0034 (23-213)||(69923-70113)
[»] chr4 (32 HSPs)
chr4 (7-213)||(16150233-16150439)
chr4 (7-213)||(16154379-16154585)
chr4 (10-213)||(1646824-1647027)
chr4 (33-213)||(11204802-11204982)
chr4 (33-213)||(27902907-27903087)
chr4 (21-213)||(20892553-20892745)
chr4 (7-213)||(51604336-51604542)
chr4 (33-213)||(44659436-44659616)
chr4 (36-213)||(3262367-3262544)
chr4 (37-209)||(29451111-29451283)
chr4 (33-213)||(15356690-15356870)
chr4 (39-213)||(15072881-15073055)
chr4 (27-213)||(15258449-15258635)
chr4 (75-213)||(16234344-16234482)
chr4 (75-210)||(12479125-12479260)
chr4 (75-213)||(8050975-8051113)
chr4 (75-213)||(8388934-8389072)
chr4 (75-213)||(14301331-14301469)
chr4 (75-213)||(17092501-17092639)
chr4 (75-213)||(19634658-19634796)
chr4 (75-213)||(19776145-19776283)
chr4 (75-213)||(27713858-27713996)
chr4 (75-213)||(23958269-23958407)
chr4 (90-213)||(40475562-40475685)
chr4 (111-213)||(14683089-14683191)
chr4 (111-213)||(16251238-16251340)
chr4 (49-151)||(14993954-14994056)
chr4 (111-213)||(16352918-16353020)
chr4 (111-213)||(18224834-18224936)
chr4 (111-213)||(15145281-15145383)
chr4 (146-213)||(15001048-15001115)
chr4 (111-209)||(8708433-8708531)
[»] scaffold0072 (1 HSPs)
scaffold0072 (33-213)||(53598-53778)
[»] scaffold0004 (2 HSPs)
scaffold0004 (33-212)||(325259-325438)
scaffold0004 (51-211)||(201059-201219)
[»] scaffold0235 (2 HSPs)
scaffold0235 (7-213)||(9008-9214)
scaffold0235 (7-213)||(19222-19428)
[»] scaffold0067 (4 HSPs)
scaffold0067 (7-209)||(49727-49929)
scaffold0067 (7-209)||(58761-58963)
scaffold0067 (7-209)||(65149-65351)
scaffold0067 (33-213)||(29175-29355)
[»] scaffold0009 (1 HSPs)
scaffold0009 (7-213)||(251173-251379)
[»] scaffold0243 (1 HSPs)
scaffold0243 (60-213)||(10372-10525)
[»] scaffold1530 (1 HSPs)
scaffold1530 (33-209)||(138-314)
[»] scaffold0010 (2 HSPs)
scaffold0010 (33-213)||(45000-45180)
scaffold0010 (36-213)||(39909-40086)
[»] chr2 (31 HSPs)
chr2 (33-209)||(23278933-23279109)
chr2 (15-213)||(19717109-19717307)
chr2 (7-213)||(27789893-27790099)
chr2 (49-213)||(25256071-25256235)
chr2 (7-213)||(12576506-12576712)
chr2 (7-213)||(23098102-23098308)
chr2 (75-213)||(9337735-9337873)
chr2 (75-213)||(9486369-9486507)
chr2 (75-213)||(16983393-16983531)
chr2 (60-213)||(1065904-1066057)
chr2 (60-213)||(31832811-31832964)
chr2 (75-213)||(17001153-17001291)
chr2 (75-213)||(24264523-24264661)
chr2 (75-213)||(27220169-27220307)
chr2 (75-213)||(44383722-44383860)
chr2 (98-213)||(24874925-24875040)
chr2 (75-213)||(24712187-24712325)
chr2 (75-213)||(27373422-27373560)
chr2 (75-213)||(41606537-41606675)
chr2 (94-213)||(10871003-10871122)
chr2 (111-213)||(24657846-24657948)
chr2 (98-213)||(21143216-21143331)
chr2 (111-213)||(21323454-21323556)
chr2 (75-157)||(22323494-22323576)
chr2 (51-211)||(23112894-23113054)
chr2 (111-213)||(23204467-23204569)
chr2 (111-213)||(24705670-24705772)
chr2 (129-213)||(16927513-16927597)
chr2 (128-211)||(16924132-16924215)
chr2 (111-205)||(23105916-23106010)
chr2 (111-181)||(24677672-24677742)
[»] scaffold0076 (2 HSPs)
scaffold0076 (6-213)||(31223-31430)
scaffold0076 (7-132)||(53970-54095)
[»] scaffold1373 (1 HSPs)
scaffold1373 (7-213)||(381-587)
[»] scaffold1288 (1 HSPs)
scaffold1288 (33-213)||(428-608)
[»] scaffold0124 (1 HSPs)
scaffold0124 (33-213)||(14759-14939)
[»] scaffold0239 (1 HSPs)
scaffold0239 (7-213)||(10333-10539)
[»] scaffold0304 (1 HSPs)
scaffold0304 (33-213)||(1058-1238)
[»] scaffold0088 (1 HSPs)
scaffold0088 (21-213)||(29485-29677)
[»] scaffold0077 (1 HSPs)
scaffold0077 (39-214)||(19213-19388)
[»] scaffold0156 (1 HSPs)
scaffold0156 (39-213)||(36490-36664)
[»] scaffold0261 (2 HSPs)
scaffold0261 (24-213)||(12929-13118)
scaffold0261 (24-213)||(21109-21298)
[»] scaffold0222 (2 HSPs)
scaffold0222 (33-213)||(9614-9794)
scaffold0222 (7-213)||(1034-1242)
[»] scaffold0708 (1 HSPs)
scaffold0708 (7-213)||(5692-5898)
[»] scaffold0074 (1 HSPs)
scaffold0074 (7-213)||(14674-14880)
[»] scaffold1477 (1 HSPs)
scaffold1477 (49-213)||(779-943)
[»] scaffold0206 (1 HSPs)
scaffold0206 (21-213)||(25663-25855)
[»] scaffold0054 (1 HSPs)
scaffold0054 (33-213)||(64092-64272)
[»] scaffold0001 (2 HSPs)
scaffold0001 (21-213)||(514914-515106)
scaffold0001 (44-213)||(452797-452966)
[»] scaffold0309 (1 HSPs)
scaffold0309 (10-213)||(12347-12550)
[»] scaffold0664 (1 HSPs)
scaffold0664 (33-147)||(6655-6769)
[»] scaffold0058 (1 HSPs)
scaffold0058 (7-213)||(21673-21879)
[»] scaffold0035 (1 HSPs)
scaffold0035 (39-213)||(5302-5476)
[»] scaffold0443 (1 HSPs)
scaffold0443 (33-213)||(11360-11540)
[»] scaffold0165 (1 HSPs)
scaffold0165 (10-213)||(11511-11714)
[»] scaffold0190 (1 HSPs)
scaffold0190 (7-213)||(30866-31072)
[»] scaffold0031 (2 HSPs)
scaffold0031 (33-166)||(110208-110341)
scaffold0031 (111-213)||(52576-52678)
[»] scaffold0751 (1 HSPs)
scaffold0751 (33-213)||(4732-4912)
[»] scaffold0108 (1 HSPs)
scaffold0108 (19-213)||(49656-49850)
[»] scaffold0104 (2 HSPs)
scaffold0104 (33-213)||(24767-24947)
scaffold0104 (10-214)||(43969-44171)
[»] scaffold0102 (1 HSPs)
scaffold0102 (49-213)||(42249-42413)
[»] scaffold0079 (3 HSPs)
scaffold0079 (33-213)||(3269-3449)
scaffold0079 (111-213)||(28629-28731)
scaffold0079 (111-213)||(36049-36151)
[»] scaffold0706 (1 HSPs)
scaffold0706 (60-147)||(5809-5896)
[»] scaffold0146 (1 HSPs)
scaffold0146 (27-213)||(5641-5827)
[»] scaffold0020 (3 HSPs)
scaffold0020 (33-135)||(99156-99258)
scaffold0020 (19-213)||(175539-175733)
scaffold0020 (153-213)||(99255-99315)
[»] scaffold0865 (1 HSPs)
scaffold0865 (49-213)||(1861-2025)
[»] scaffold0192 (1 HSPs)
scaffold0192 (49-213)||(29078-29242)
[»] scaffold0133 (1 HSPs)
scaffold0133 (49-213)||(28874-29038)
[»] scaffold0106 (1 HSPs)
scaffold0106 (33-213)||(33888-34068)
[»] scaffold0585 (1 HSPs)
scaffold0585 (39-213)||(4668-4842)
[»] scaffold0476 (1 HSPs)
scaffold0476 (7-213)||(1092-1298)
[»] scaffold0053 (1 HSPs)
scaffold0053 (7-117)||(65845-65955)
[»] scaffold0068 (1 HSPs)
scaffold0068 (21-166)||(67669-67814)
[»] scaffold0259 (1 HSPs)
scaffold0259 (111-213)||(7809-7911)
[»] scaffold0080 (4 HSPs)
scaffold0080 (111-213)||(13544-13646)
scaffold0080 (111-213)||(10889-10991)
scaffold0080 (111-213)||(31435-31537)
scaffold0080 (111-213)||(36901-37003)
[»] scaffold0055 (1 HSPs)
scaffold0055 (75-213)||(21798-21936)
[»] scaffold0149 (3 HSPs)
scaffold0149 (121-210)||(5012-5101)
scaffold0149 (121-210)||(9443-9532)
scaffold0149 (111-213)||(380-482)
[»] scaffold0266 (1 HSPs)
scaffold0266 (117-213)||(16665-16761)
[»] scaffold0049 (1 HSPs)
scaffold0049 (49-213)||(49466-49630)
[»] scaffold0109 (2 HSPs)
scaffold0109 (98-213)||(40706-40821)
scaffold0109 (111-213)||(13775-13877)
[»] scaffold0454 (1 HSPs)
scaffold0454 (111-213)||(9491-9593)
[»] scaffold0523 (1 HSPs)
scaffold0523 (60-213)||(2422-2575)
[»] scaffold0431 (1 HSPs)
scaffold0431 (75-210)||(9922-10057)
[»] scaffold0393 (1 HSPs)
scaffold0393 (111-213)||(15645-15747)
[»] scaffold0081 (2 HSPs)
scaffold0081 (111-213)||(21155-21257)
scaffold0081 (111-181)||(36611-36681)
[»] scaffold0044 (2 HSPs)
scaffold0044 (75-213)||(2975-3113)
scaffold0044 (111-213)||(16711-16813)
[»] scaffold0042 (1 HSPs)
scaffold0042 (111-213)||(37471-37573)
[»] scaffold0017 (1 HSPs)
scaffold0017 (111-213)||(17717-17819)
[»] scaffold1459 (1 HSPs)
scaffold1459 (111-207)||(1683-1779)
[»] scaffold0560 (1 HSPs)
scaffold0560 (98-213)||(8379-8494)
[»] scaffold0026 (1 HSPs)
scaffold0026 (10-213)||(51363-51566)
[»] scaffold0177 (1 HSPs)
scaffold0177 (111-209)||(12007-12105)
[»] scaffold0126 (1 HSPs)
scaffold0126 (142-213)||(43469-43540)
[»] scaffold0509 (1 HSPs)
scaffold0509 (49-211)||(11383-11545)
[»] scaffold0298 (1 HSPs)
scaffold0298 (27-109)||(9793-9875)
[»] scaffold0218 (1 HSPs)
scaffold0218 (111-205)||(25363-25457)
[»] scaffold0405 (1 HSPs)
scaffold0405 (49-166)||(5199-5316)
[»] scaffold1985 (1 HSPs)
scaffold1985 (111-213)||(223-322)
[»] scaffold0244 (1 HSPs)
scaffold0244 (129-213)||(19905-19989)
[»] scaffold0130 (1 HSPs)
scaffold0130 (39-211)||(4468-4640)
[»] scaffold0335 (1 HSPs)
scaffold0335 (30-145)||(4820-4935)
[»] scaffold1615 (1 HSPs)
scaffold1615 (111-205)||(1384-1478)
[»] scaffold0501 (1 HSPs)
scaffold0501 (111-181)||(12246-12316)
[»] scaffold0215 (1 HSPs)
scaffold0215 (111-213)||(28146-28248)
[»] scaffold0120 (1 HSPs)
scaffold0120 (111-199)||(8587-8675)
[»] scaffold0358 (2 HSPs)
scaffold0358 (111-198)||(8516-8603)
scaffold0358 (111-198)||(17712-17799)
[»] scaffold0023 (1 HSPs)
scaffold0023 (111-198)||(151647-151734)
[»] scaffold1881 (1 HSPs)
scaffold1881 (111-213)||(1048-1150)
[»] scaffold0084 (1 HSPs)
scaffold0084 (111-205)||(7782-7876)
[»] scaffold0040 (1 HSPs)
scaffold0040 (111-205)||(111558-111652)
[»] scaffold0022 (1 HSPs)
scaffold0022 (111-181)||(35365-35435)
[»] scaffold0181 (1 HSPs)
scaffold0181 (136-213)||(29592-29669)
[»] scaffold0008 (1 HSPs)
scaffold0008 (108-169)||(132137-132198)
[»] scaffold0162 (1 HSPs)
scaffold0162 (111-195)||(15479-15563)


Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 34643274 - 34643481
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  34643274 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatatttgtcgttggaaaaccaagctgtgatcgacaggttaccagtggtga 34643373  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  34643374 atgagtttcctgaagtttttccggatgagattccatatgtaccaccagagagggaggttgagttctccattgatctagtaccaggaacgaagccggtatc 34643473  T
Q  206 gatggcac 213  Q
    ||||||||    
T  34643474 gatggcac 34643481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 33 - 209
Target Start/End: Complemental strand, 19437568 - 19437392
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  19437568 attcttatgttttctttgatggcatccttgtcgttagaaaatcaagctgtgattgacaggttaccggtggtgaatgagtttcctgaagtttttccggatg 19437469  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
    ||||||||||||| |||||||| || |||||||| || |  ||||| || || || | |||||||||||||||||||    
T  19437468 agattccagatgtgccaccagaaagagaggttgaatttttaattgaccttgttccgggaacgaagccggtgtcgatg 19437392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 33 - 209
Target Start/End: Complemental strand, 19455589 - 19455413
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19455589 attcttatgttttctttgatggcatctttgtcgttagagaatcaagctgtgatcgacaggttaccagttgtgaatgagtttcctgaagtttttccggatg 19455490  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
    ||||||||||||| |||||| ||||||||||||| || || ||||| || || |||| ||| ||||||| |||||||    
T  19455489 agattccagatgtgccaccaaagagggaggttgaattttcaattgaccttgttccaggaacaaagccggcgtcgatg 19455413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 21567680 - 21567884
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  || |||| || || ||||||||||||||| |||||||||  ||||| || || || || |||||||| ||||||||||||||||||||    
T  21567680 agatgaagcagttaaaacgtgatggaattctgatgtattctttgatggcatctttgtcattggagaatcaggctgtgattgacaggttaccagtggtgaa 21567779  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||| || || ||||| ||||||||||| ||||| ||||||||||||||||| |||||||| ||||| || || |||| ||||||||||||||||    
T  21567780 tgaatttccggaggtgtttcctgatgagattccggatgtgccaccagagagggaggtggagttctcgattgaccttgttccaggaacgaagccggtgtcg 21567879  T
Q  207 atggc 211  Q
    |||||    
T  21567880 atggc 21567884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 24516129 - 24516309
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    |||||||||| |||| |||||||||  ||||||||||| || || ||| |||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  24516129 attctgatgttttctttgatggcatatttgtcgttagagaatcacgctctgattgacaggttaccagtggtgaatgaatttcctgaagtttttcctgatg 24516228  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||| |||||| ||||| ||||| |||||||| || || ||||| || || |||| |||||||||||||||||| ||||    
T  24516229 agattctagatgtgccaccggagagagaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatagcac 24516309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 14377605 - 14377811
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || ||||||||||||||| | |||||||  |||||||||||||| | || |||||| ||| |||| || ||||||||    
T  14377605 agatgaaacaactagaacgtgatggaattctgatgtattctttaatggcatatttgtcgttagaaaatcgagttgtgattgacgggttgccggtggtgaa 14377704  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||| ||||| ||||| ||||||||| | ||||| |||||||||||||||||||| || || ||||| || || || | ||||||||||||||||    
T  14377705 tgattttccagaagtgtttcctgatgagatttctgatgtgccaccagagagggaggttgaattttcaattgaccttgttccgggaacgaagccggtgtcg 14377804  T
Q  207 atggcac 213  Q
    |||||||    
T  14377805 atggcac 14377811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 8761469 - 8761647
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| | |||||||  |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||  ||||| ||||    
T  8761469 attcttatgttttctttaatggcatatttgtcgttagaaaatcaagctgtaattgacaggttaccagtggtgaatgagtttcctgaag--tttcccgatg 8761566  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| ||||| ||||  |||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  8761567 agattccagatgtgccaccggagaaagaggttgaattttcaattgaccttgtcccaggaacgaagccggtgtcgatggcac 8761647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 15461914 - 15461724
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    |||||||| || || || |||| |||| |||||||||  ||||||||||| || |||||||| ||||||||  |||||||||||||||| ||||| ||||    
T  15461914 gaacgagatggaatccttatgttttctttgatggcatctttgtcgttagagaatcaagctgtaatcgacagactaccagtggtgaatgaatttcccgaag 15461815  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
    ||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||| || || | |||||| || |||||||||||    
T  15461814 tttttccagatgagattcctgatgtgccaccagaaagggaagttgagttctcgattgatcttgttccgggaacgaaaccagtgtcgatggc 15461724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 18797282 - 18797076
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    |||||||||| |||||||| || || ||||||||||| ||  ||||||||| ||| |||||||| || || |||||||| |||| |||||||||||| ||    
T  18797282 agatgaagcagctagaacgtgatggaattctgatgtactcattgatggcatccttatcgttagagaatcaggctgtgattgacaagttaccagtggtaaa 18797183  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| |||||||| || ||||| ||||||||||| ||||| |||||| | ||||| ||||| || || ||||| || || |||| ||||||||||||||||    
T  18797182 tgattttcctgaggtgtttccagatgagattcctgatgtgccaccaaaaagggaagttgaattttcaattgaccttgttccaggaacgaagccggtgtcg 18797083  T
Q  207 atggcac 213  Q
    |||||||    
T  18797082 atggcac 18797076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 24293539 - 24293677
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||| ||||| || |||||||| || |||||||| || |    
T  24293539 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccggatgagattcctgatgtgcctccagagagagaagttgagttttcta 24293638  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  24293639 ttgatcttgtccctggaacgaagccggtctcgatggcac 24293677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 29590196 - 29590334
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  29590196 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 29590295  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  29590296 ttgatcttgttcctggaacgaagccggtctcgatggcac 29590334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 2872560 - 2872698
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  2872560 caagcagtgattgataggttaccggtggtgtgtgattttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 2872659  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  2872660 ttgatcttgttcctggaacgaagccggtctcgatggcac 2872698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 16574414 - 16574276
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  16574414 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 16574315  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  16574314 ttgatcttgttcctggaacgaagccggtctcgatggcac 16574276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 16620966 - 16621104
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  16620966 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 16621065  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  16621066 ttgatcttgttcctggaacgaagccggtctcgatggcac 16621104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 21474192 - 21473986
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    |||||||||| |||||||| || | |||  | |||| |||  |||||||||  |||||||| || || |||| |||||| || || || || || |||||    
T  21474192 agatgaagcagctagaacgtgatgagatcttaatgttttccttgatggcatatttgtcgttggagaatcaagttgtgattgatagattgccggttgtgaa 21474093  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||| ||||||||||| |||||||| || ||||| |||||||||||||||||||| ||  | |||||||| || ||   ||||||||||||||||    
T  21474092 tgaatttccggaagtttttcctgatgagatccctgatgtgccaccagagagggaggttgaatttgcaattgatcttgttcctagaacgaagccggtgtcg 21473993  T
Q  207 atggcac 213  Q
    |||||||    
T  21473992 atggcac 21473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 10466537 - 10466744
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || || ||||| || || ||| ||||||||||||||||||| |  || ||  ||||||| ||||||||||| || ||||||| ||| |||||    
T  10466537 agatgaaacagctggaacgtgatggaattttgatgtattctctgatggcctatttatccgtagaaaatcaagctgtgattgataggttactagttgtgaa 10466636  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccag-agagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||| ||| | ||||| ||||| ||||||||||| ||||  ||||||| | ||||| ||||| || || ||||| || || |||| ||| |||||||||||    
T  10466637 tgaattttcagaagtgtttcctgatgagattcctgatgcgccaccagaaaagggaagttgaattttcaattgaacttgttccaggaacaaagccggtgtc 10466736  T
Q  206 gatggcac 213  Q
    ||||||||    
T  10466737 gatggcac 10466744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 25115076 - 25114938
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||||||||||||||| ||||| || |||||||| || || ||||| || |    
T  25115076 caagcagtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccggatgagattcctgatgtgcctccagagagagaagtcgagttttcta 25114977  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | ||||||||||||||| |||||||    
T  25114976 ttgatcttgttcctggaacgaagccggtgtcaatggcac 25114938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 22828148 - 22828250
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||| || || ||||| || |||||||| || || | ||||||||||||||||||||    
T  22828148 tttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 22828247  T
Q  211 cac 213  Q
    |||    
T  22828248 cac 22828250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 25770339 - 25770239
Alignment:
Q  104 gaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtg 203  Q
    |||||| ||||| ||||||||||| |||||||| || ||||| |||||||||||||||||||| ||  | ||||||||||| || | |||||||||||||    
T  25770339 gaatgaatttccggaagtttttcctgatgagatccctgatgtgccaccagagagggaggttgaatttgcaattgatctagttcctggaacgaagccggtg 25770240  T
Q  204 t 204  Q
    |    
T  25770239 t 25770239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 27189960 - 27189822
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||| ||||||||||| |||||||| ||||| || || || ||||| || |    
T  27189960 caagcagtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtacccccagaaagagaagtcgagttttcta 27189861  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||| ||||| ||||||||||    
T  27189860 ttgatcttgtccctggaacgaaaccggtctcgatggcac 27189822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 27259280 - 27259418
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||| ||||||||||| |||||||| ||||| || || || ||||| || |    
T  27259280 caagcagtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtacccccagaaagagaagtcgagttttcta 27259379  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||| ||||| ||||||||||    
T  27259380 ttgatcttgtccctggaacgaaaccggtctcgatggcac 27259418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 27563626 - 27563728
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| || || ||||||||||| || ||||||||||| || ||||| || |||||||| || || | || |||||||||||||||||    
T  27563626 tttcctgaagtttttccagacgaaattccagatgtgcctccagagagggaagtcgagttttctattgatcttgttcctggaatgaagccggtgtcgatgg 27563725  T
Q  211 cac 213  Q
    |||    
T  27563726 cac 27563728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 28312154 - 28312016
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || || ||||| || || ||||| || |    
T  28312154 caagcagtgattgataggctaccggtggtgtgtgattttcctgaagtttttccagatgagattcctgatgtgcctccggagagagaagtcgagttttcta 28312055  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  28312054 ttgatcttgttcctggaacgaagccggtctcgatggcac 28312016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 24366966 - 24366867
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  ||||||| || |||||||| ||||| ||||| ||||| ||||    
T  24366966 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatgggttacctgtagtgaatgaatttccggaagtgtttcctgatg 24366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 19867175 - 19867073
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || | |||||| || |||||||| || |||||||| || |  | ||||||||||||||||||||    
T  19867175 tttcctgaagtttttccagatgaaattcctgatgtgcctcaagagagagaagttgagttttctattgatcttgttcttggaacgaagccggtgtcgatgg 19867076  T
Q  211 cac 213  Q
    |||    
T  19867075 cac 19867073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 16961281 - 16961377
Alignment:
Q  117 gaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||| ||||| ||||| ||||| |||||||||||  | |||||||| || |||||||| ||  | | |||||||||||||||||||||||    
T  16961281 gaagtttttccagatgaaattcctgatgtgccaccagagagataagttgagttttctattgatcttgtgactggaacgaagccggtgtcgatggcac 16961377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 28260973 - 28261092
Alignment:
Q  94 taccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaac 193  Q
    |||| ||||||  ||| ||||||||||| ||||| ||||||||||| ||||| || |||||||| || || ||||| || |||||||| || || | |||    
T  28260973 taccggtggtgtgtgaatttcctgaagtctttccagatgagattcctgatgtgcctccagagagagaagtcgagttttctattgatcttgttcctggaac 28261072  T
Q  194 gaagccggtgtcgatggcac 213  Q
    ||| ||||| ||||||||||    
T  28261073 gaaaccggtctcgatggcac 28261092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 28284943 - 28284824
Alignment:
Q  94 taccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaac 193  Q
    |||| ||||||  ||| ||||||||||| ||||| ||||||||||| ||||| || |||||||| || || ||||| || |||||||| || || | |||    
T  28284943 taccggtggtgtgtgaatttcctgaagtctttccagatgagattcctgatgtgcctccagagagagaagtcgagttttctattgatcttgttcctggaac 28284844  T
Q  194 gaagccggtgtcgatggcac 213  Q
    ||| ||||| ||||||||||    
T  28284843 gaaaccggtctcgatggcac 28284824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 28339722 - 28339841
Alignment:
Q  94 taccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaac 193  Q
    |||| ||||||  ||| ||||||||||| ||||| ||||||||||| ||||| || |||||||| || || ||||| || |||||||| || || | |||    
T  28339722 taccggtggtgtgtgaatttcctgaagtctttccagatgagattcctgatgtgcctccagagagagaagtcgagttttctattgatcttgttcctggaac 28339821  T
Q  194 gaagccggtgtcgatggcac 213  Q
    ||| ||||| ||||||||||    
T  28339822 gaaaccggtctcgatggcac 28339841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 21755420 - 21755322
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
    |||||||||||||| ||  |||| ||||| ||||| || |||||||| || || ||||| || |||||||| || || | |||||||||||||||||||    
T  21755420 tttcctgaagttttcccatatgaaattcctgatgtgcctccagagagagaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatg 21755322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 16100506 - 16100446
Alignment:
Q  108 gagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagt 168  Q
    |||||||| |||||||||||||| || ||| | ||  ||||||||||||||||||||||||    
T  16100506 gagtttccagaagtttttccggaggatattaccgagttaccaccagagagggaggttgagt 16100446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 24366864 - 24366798
Alignment:
Q  147 ccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||||| || || ||||| || || | || ||| |||||||||||||||||||    
T  24366864 ccaccagagagggaggttgaattttcaattgaccttgttcaaggaactaagccggtgtcgatggcac 24366798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 205
Target Start/End: Original strand, 23085490 - 23085658
Alignment:
Q  37 tgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagat 136  Q
    |||||| |||||||||||| | ||||||  | || || ||||| ||||| || | ||||| ||| |||  ||| ||||||||||||||  | ||||||||    
T  23085490 tgatgttttctctgatggcgtccttgtctgttgagaatcaagcagtgatagataagttacaagttgtgtgtgattttcctgaagttttctctgatgagat 23085589  T
Q  137 tccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||| ||||  || ||||| || || ||||| || || |||||||| || ||||  |||||||| |||||    
T  23085590 tcctgatgcgccgccagaaagagaagttgaattttcgattgatcttgttccaggtacgaagcctgtgtc 23085658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 3716 - 3919
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3716 gagatgaagcagctagaacgagacgggattctgatgtattctctaatggcatgtttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 3815  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  3816 atgagttccctgaagtttttccagatgaaattccagacgtaccaccagagagggaggttgagttctccatcgatctagtaccaggaacgaagccggtgtc 3915  T
Q  206 gatg 209  Q
    ||||    
T  3916 gatg 3919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2111 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold2111
Description:

Target: scaffold2111; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 133 - 340
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    |||||||||||  |||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  133 gagatgaagcaggtagaacgagatgggattctgatgtattctctaatagcatgtttgtcgttagaaaaccaagctgtgatcgactagttaccagtggtga 232  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  233 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagaaagggaggttgagttctccatcgatctagtaccaggaacgaagccggtgtc 332  T
Q  206 gatggcac 213  Q
    ||||||||    
T  333 gatggcac 340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 19615394 - 19615187
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||  |||||||||||||||||||||||||| | |||||||||||||||||    
T  19615394 gagatgaagcagctagaacgagatgggattctgatgtattctttaatggcatatttgtcgttagaaaaccaagctgtgattggcaggttaccagtggtga 19615295  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  19615294 acgagtttcctgaagtttttccggatgagattccagatgtaccaccagaaagggaggttgagttctccatcgatctagtaccaggaacgaagccggtgtc 19615195  T
Q  206 gatggcac 213  Q
    ||||||||    
T  19615194 gatggcac 19615187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 15343149 - 15342943
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||  || || ||||||||||||||| | |||||||  |||||||||||||| || |||||||| ||||||||||||||||||||    
T  15343149 agatgaagcagttagaacatgatggaattctgatgtattctttaatggcatatttgtcgttagaaaatcaggctgtgattgacaggttaccagtggtgaa 15343050  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| |||||||||||||||||||||||||||||||| || |||| ||| |||||||||||||| |||||||| || || || | ||| |||||| |||||    
T  15343049 tgaatttcctgaagtttttccggatgagattccagacgtgccacaagaaagggaggttgagttttccattgaccttgttccgggaacaaagccgatgtcg 15342950  T
Q  207 atggcac 213  Q
    |||||||    
T  15342949 atggcac 15342943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 13966225 - 13966405
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| ||||||||||| || |||||||| |||||  |||| ||||| ||||    
T  13966225 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgacaggttacctgtagtgaatgaatttccaaaagtatttcctgatg 13966324  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  13966325 agattcctgatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 13966405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 14140397 - 14140191
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || ||| ||||||||||||| |||||||   ||||||||||||| ||||||||||| ||||||||||  ||||||||    
T  14140397 agatgaagcagttagaacgtgatggaattttgatgtattctctaatggcatatctgtcgttagaaaatcaagctgtgattgacaggttacatgtggtgaa 14140298  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    |||||| || || || |||||  |||||||||| ||||| ||||||||||||||||| ||||| || ||||| || || |||| ||||||||||||||||    
T  14140297 tgagttcccggaggtgtttcctaatgagattcctgatgtgccaccagagagggaggtggagttttcgattgaccttgttccaggaacgaagccggtgtcg 14140198  T
Q  207 atggcac 213  Q
    |||||||    
T  14140197 atggcac 14140191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 16948003 - 16948209
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||||| || || ||||||||||||||| | ||||||  ||||||||||||||| ||||||||||| |||| ||| | |||||||||    
T  16948003 agatgaaacagctagaacgtgatggaattctgatgtattctttaatggcaaacttgtcgttagaaaatcaagctgtgattgacaagttgctagtggtgaa 16948102  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||| ||||| ||||| ||||||||| | ||||| |||||||||||||||||||| || || ||||| || || |||| ||| ||||||||||||    
T  16948103 tgaatttccagaagtgtttcctgatgagatttctgatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacaaagccggtgtcg 16948202  T
Q  207 atggcac 213  Q
    |||||||    
T  16948203 atggcac 16948209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 14283931 - 14284111
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||| ||||||||| ||||||||| ||||| ||||||||||| ||||||||||| ||||||||||| ||||  ||  | ||||| ||||    
T  14283931 attctgatgtattctttgatggcatccttgtcgttggaaaatcaagctgtgattgacaggttaccggtggtgaatgaatttctggagatgtttcctgatg 14284030  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| ||||||||||||||||| ||||| || ||||| || || |||| ||| |||||||||||||||||||    
T  14284031 agattcctgatgtgccaccagagagggaggtggagttttcgattgaccttgttccaggaacaaagccggtgtcgatggcac 14284111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 15100160 - 15100340
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    |||||||||| |||| ||||||||| |||||| || ||||| ||||||||||| |||| ||| ||||| |||||||| ||||| ||||||||||| ||||    
T  15100160 attctgatgttttctttgatggcatacttgtcattggaaaatcaagctgtgattgacaagttgccagttgtgaatgaatttccagaagtttttcctgatg 15100259  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||| || |||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  15100260 agattccagatgtgccaccagaaagagaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 15100340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 13676143 - 13675964
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  ||||||||||| || |||||| |||| |||||||| ||| | ||||||||||||||||||||||||||||| |    
T  13676143 attcttatgttttctttgatggcatatttgtcgttagagaatcaagctctgattgacaggttgccaattgtgaatgagtttcctgaagtttttccggacg 13676044  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| | |||||||||||||||||| || |  ||||| || || | || |||||||||||||||||||||||    
T  13676043 agattccagatgtgctaccagagagggaggttgaatt-ttaattgaccttgttctaggaacgaagccggtgtcgatggcac 13675964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 16069854 - 16070034
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    |||||||||| |||| | ||||||| |||||| || || || ||||||||||| || || || ||||| |||||||| ||||| ||||||||||| ||||    
T  16069854 attctgatgttttctttaatggcatacttgtcattggagaatcaagctgtgattgatagattgccagttgtgaatgaatttccagaagtttttcctgatg 16069953  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||| ||||||||||||    
T  16069954 agattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccgatgtcgatggcac 16070034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 26116147 - 26116327
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  ||||||| || |||||||| ||||| ||||| ||||| ||||    
T  26116147 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatgggttacctgtagtgaatgaatttccggaagtgtttcctgatg 26116246  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||||||| ||||||||||| || || ||||| || || |||| ||| |||||||||||||||||||    
T  26116247 agattcctgatgtgccaccagaaagggaggttgaattttcaattgaccttgttccaggaactaagccggtgtcgatggcac 26116327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 26092358 - 26092535
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  26092358 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 26092457  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  26092458 ttcctgatgtgccaccagagagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 26092535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 49154990 - 49154813
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||| | ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  49154990 ctgatgtattctctaatggcacagttgtcgttagaaaatcaagctgtggttgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 49154891  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||| ||||| |||||||| || |||| ||| |||||||||||||||||||    
T  49154890 ttcctgatgtgccaccagagagggaggttgaattctcaattgatcttgttccaggaactaagccggtgtcgatggcac 49154813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 213
Target Start/End: Original strand, 11385962 - 11386166
Alignment:
Q  9 atgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatg 108  Q
    ||||||||  ||||||| || || ||||||||||||||| |||||||||  |||||||| || || || |||||||| ||||| ||||| || |||||||    
T  11385962 atgaagcagttagaacgtgatggaattctgatgtattctttgatggcatctttgtcgttggagaatcaggctgtgattgacagattaccggtagtgaatg 11386061  T
Q  109 agtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgat 208  Q
    | || ||||| || ||||| |||||||| || ||||| ||||| ||||||||||| ||||| || ||||| || || |||| ||||||||||||||||||    
T  11386062 aattccctgaggtgtttcctgatgagatccctgatgtgccaccggagagggaggtagagttttcaattgaccttgttccaggaacgaagccggtgtcgat 11386161  T
Q  209 ggcac 213  Q
    |||||    
T  11386162 ggcac 11386166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 21755104 - 21754924
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||| | ||||||||||| || | |||||| || |||||||| ||||| ||||||||||| ||||    
T  21755104 attctgatgtattctctaatggcacaattgtcgttagaacatcaagctgtgattgatatgttacctgtagtgaatgaatttccagaagtttttcctgatg 21755005  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| | ||||||||||||| |||| || || ||||| || || || | |||||||||||||||||||||||    
T  21755004 agattcctgatgtgctaccagagagggagattgaattttcaattgaccttgttcccggaacgaagccggtgtcgatggcac 21754924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 18051484 - 18051686
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || |||||||||| |||||| |||||||   ||||||||||||| ||||||||||| |||| | || ||||||||||    
T  18051484 agatgaagcagttagaacgtgatggaattctgatgttttctctaatggcatatctgtcgttagaaaatcaagctgtgattgacaagctagcagtggtgaa 18051583  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||||||||| || || || || ||||||||||| ||||| || |||||||||||||| ||||| || ||||| || || || | ||| ||||||||||||    
T  18051584 tgagtttccagaggtgttccctgatgagattcctgatgtgccgccagagagggaggtggagttttcaattgaccttgttcctggaacaaagccggtgtcg 18051683  T
Q  207 atg 209  Q
    |||    
T  18051684 atg 18051686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 14261802 - 14261982
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||| | |||||| || || || ||||||||||| || || || || || |||| ||| ||||| ||||||||||| ||||    
T  14261802 attctaatgttttctttgatggcgtacttgtcattggagaatcaagctgtgattgatagattgccggttgtgagtgaatttccagaagtttttcctgatg 14261901  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||||||||||||||| || || || ||||| || || | |||||||||||||||||||||||    
T  14261902 agattccagatgtgccaccagagagggaggttgaattttcaatcgatcttgtgcctggaacgaagccggtgtcgatggcac 14261982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 11300797 - 11300950
Alignment:
Q  60 ttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagaggg 159  Q
    |||||||||||||| ||||||||||| ||  | || || || |||||||| ||||| ||||| || || ||||||||||| ||||| |||||||||||||    
T  11300797 ttgtcgttagaaaatcaagctgtgattgatggtttgcctgtagtgaatgaatttccagaagtattccctgatgagattcctgatgtgccaccagagaggg 11300896  T
Q  160 aggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  11300897 aggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 11300950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 14335045 - 14334907
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  14335045 caagcggtgattgataggttaccggtggtgtgtgaatttcctgaagtttttcccgatgagattcctgatgtgcctccagagagagaagttgagttttcta 14334946  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  14334945 ttgatcttgttcctggaacgaagccggtctcgatggcac 14334907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 44788972 - 44789110
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || ||||| || || |    
T  44788972 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgaattttcta 44789071  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  44789072 ttgatcttgttcctggaacgaagccggtctcgatggcac 44789110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 12799058 - 12799191
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    |||||||||| |||| ||||||||| | |||| || || || ||||||||||| ||||| || ||||| ||||| || ||| | ||||||||||| |||     
T  12799058 attctgatgttttctttgatggcatacctgtcattggagaatcaagctgtgattgacagattgccagttgtgaacgaattttcggaagtttttcctgata 12799157  T
Q  133 agattccagatgtaccaccagagagggaggttga 166  Q
    ||||||||||||| ||||||||||||||||||||    
T  12799158 agattccagatgtgccaccagagagggaggttga 12799191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 8710254 - 8710116
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  8710254 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 8710155  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | ||||||| |||| ||||||||||    
T  8710154 ttgatcttgttcctggaacgaagtcggtctcgatggcac 8710116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 10873339 - 10873201
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| || |||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  10873339 caagcagtgattgataggttaccggtggtgtgtgaattccctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 10873240  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  10873239 ttgatcttgttcctggaacgaagccggtctcgatggcac 10873201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 14957167 - 14957065
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||| || |||||||| || || | ||||||||||||||||||||    
T  14957167 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagggaagttgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 14957068  T
Q  211 cac 213  Q
    |||    
T  14957067 cac 14957065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 15158678 - 15158816
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  15158678 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 15158777  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | ||| |||||||| ||||||||||    
T  15158778 ttgatcttgtccctggaacaaagccggtctcgatggcac 15158816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 18587792 - 18587930
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||||||||  |||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  18587792 caagcagtgattgataggttaccgatggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 18587891  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  18587892 ttgatcttgttcctggaacgaagccggtctcgatggcac 18587930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 11234857 - 11234972
Alignment:
Q  98 agtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
    |||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || | |||||||    
T  11234857 agtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaacgaag 11234956  T
Q  198 ccggtgtcgatggcac 213  Q
    ||||| ||||||||||    
T  11234957 ccggtctcgatggcac 11234972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 197
Target Start/End: Complemental strand, 19149726 - 19149539
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  ||||||| || || ||||| |||| |||  ||||||| | ||| || || || || |||| |||||| || || || ||||| |||| |||    
T  19149726 tgaagcagttagaacgtgatggaattctaatgttttccttgatggcgtacttatcattggagaatcaagttgtgattgatagattgccagttgtgagtga 19149627  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
     ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| || || ||||| || || || |||||||||    
T  19149626 atttccagaagtttttcctgatgagattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttcccgaaacgaag 19149539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 197
Target Start/End: Complemental strand, 20749125 - 20748938
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  ||||||| || || ||||| |||| |||  ||||||| | ||| || || || || |||| |||||| || || || ||||| |||| |||    
T  20749125 tgaagcagttagaacgtgatggaattctaatgttttccttgatggcgtacttatcattggagaatcaagttgtgattgatagattgccagttgtgagtga 20749026  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
     ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| || || ||||| || || || |||||||||    
T  20749025 atttccagaagtttttcctgatgagattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttcccgaaacgaag 20748938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 9590981 - 9590879
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| || ||||| || |||||||| || || | ||||||||||||||||||||    
T  9590981 tttcctgaagtttttccagatgaaattccggatgtgcctccagagagggaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 9590882  T
Q  211 cac 213  Q
    |||    
T  9590881 cac 9590879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 12459346 - 12459221
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||||| ||||| ||||| ||||||||| | |||||||  |||||||||||||| |||| |||||| |||||||| ||  |||||||    
T  12459346 agatgaaacagctagaacgggacggaattcttatgtattctttaatggcatatttgtcgttagaaaatcaagttgtgatagacaggttgcctatggtgaa 12459247  T
Q  107 tgagtttcctgaagtttttccggatg 132  Q
    ||| ||||| ||||| ||||| ||||    
T  12459246 tgaatttccagaagtgtttcctgatg 12459221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 211
Target Start/End: Original strand, 12204363 - 12204535
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| ||||||||| |||||||||||| || ||||||||||| || |  || || || |||||||| ||||   |||| ||||| ||||||||||    
T  12204363 atgttttctttgatggcatacttgtcgttagagaatcaagctgtgattgatatattgccggttgtgaatgaatttctataagtctttcctgatgagattc 12204462  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
      ||||| || ||||||||||||||||| || || |||||||| || || |  |||||||| |||||||||||    
T  12204463 ttgatgtgccgccagagagggaggttgaattttcaattgatcttgttccgggtacgaagcctgtgtcgatggc 12204535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 18180388 - 18180256
Alignment:
Q  81 gtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatc 180  Q
    ||||| || ||| |||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || || ||||| || |||||||    
T  18180388 gtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagtcgagttttctattgatc 18180289  T
Q  181 tagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | || || | |||||||||||| ||||||||||    
T  18180288 ttgttcctggaacgaagccggtctcgatggcac 18180256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 11550759 - 11550861
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||| |||||||| ||||| ||||  ||||| || ||||||||||| |||||||| || |||||||| || || | ||||||||||||||||||||    
T  11550759 tttcctgatgtttttccagatgaaattcttgatgtgcctccagagagggaagttgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 11550858  T
Q  211 cac 213  Q
    |||    
T  11550859 cac 11550861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 13688690 - 13688552
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| |||||||||||||||||  |||||||||  |||||  | |||||||| || |||||||| || |    
T  13688690 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccaaatgagattcttgatgtgtctccagagagagaagttgagttttcta 13688591  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  13688590 ttgatcttgtccctggaacgaagccggtctcgatggcac 13688552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 8200697 - 8200615
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagag 157  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || ||||||||    
T  8200697 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagag 8200615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 12690115 - 12690013
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||| ||||||| ||| ||||| ||||| ||||| || ||||||||||| |||||||| || ||| |||| || || |  |||||||||||||||||||    
T  12690115 tttcccgaagtttatccagatgaaattccggatgtgcctccagagagggaagttgagttttctattaatcttgttcctggcacgaagccggtgtcgatgg 12690016  T
Q  211 cac 213  Q
    |||    
T  12690015 cac 12690013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 13024063 - 13023949
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||||| || || ||||||||||||||| | ||||| |  || ||  ||||||| ||||||||||| ||||||||||| || |||||    
T  13024063 agatgaaacagctagaacgggatggaattctgatgtattctttaatggcttatttctccgtagaaaatcaagctgtgattgacaggttaccggttgtgaa 13023964  T
Q  107 tgagtttcctgaagt 121  Q
    ||| ||||| |||||    
T  13023963 tgaatttccagaagt 13023949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 16727040 - 16727142
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||  || || || || ||||| || ||||||||||| || ||||| || |||||||| || || | ||||||||||||||||||||    
T  16727040 tttcctgaagtttttctagacgaaatacctgatgtgcctccagagagggaagtcgagttttctattgatcttgttccgggaacgaagccggtgtcgatgg 16727139  T
Q  211 cac 213  Q
    |||    
T  16727140 cac 16727142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 17704112 - 17704214
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||  || || || || ||||| || ||||||||||| || ||||| || |||||||| || || | ||||||||||||||||||||    
T  17704112 tttcctgaagtttttctagacgaaatacctgatgtgcctccagagagggaagtcgagttttctattgatcttgttccgggaacgaagccggtgtcgatgg 17704211  T
Q  211 cac 213  Q
    |||    
T  17704212 cac 17704214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 14150093 - 14150194
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||||||||| || ||||| ||||| ||||| || | ||||||||| || ||||| || |||||||| || |  | ||||||||||||||||||||    
T  14150093 tttcctgaagtttt-ccagatgaaattcctgatgtgcctctagagagggaagtcgagttttctattgatcttgttcttggaacgaagccggtgtcgatgg 14150191  T
Q  211 cac 213  Q
    |||    
T  14150192 cac 14150194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 13023935 - 13023869
Alignment:
Q  147 ccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||| ||||||||||| || || ||||| || || | || |||||||||||||||||||||||    
T  13023935 ccaccagaaagggaggttgaattttcaattgaccttgttctaggaacgaagccggtgtcgatggcac 13023869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 48812909 - 48812979
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatct 181  Q
    ||||| ||||||||||| ||||||||||| ||||| || ||||| ||||| ||||| || || ||||||||    
T  48812909 tttccagaagtttttcctgatgagattcctgatgtgccgccagaaagggaagttgaattttcaattgatct 48812979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 156; Significance: 5e-83; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 115320 - 115113
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||| |    
T  115320 gagatgaagcagctagaacgagatgggattctgatgtattctctaatggcatgtttgtccttagaaaaccaagctgtgatcgacaagttaccagtggtta 115221  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  115220 acgagtttcctgaagttttttcggatgagattccagatgtaccaccagaaagggaggttgagttctccatcgatctagtaccaagaacgaagccggtgtc 115121  T
Q  206 gatggcac 213  Q
    ||||||||    
T  115120 gatggcac 115113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 94455 - 94645
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    |||||||| || ||||| |||| |||| |||||||||  ||||||||||| || |||||||||||||||||  |||||||||||||||| ||||||||||    
T  94455 gaacgagatggaattcttatgttttctttgatggcatcattgtcgttagagaatcaagctgtgatcgacagactaccagtggtgaatgaatttcctgaag 94554  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
    ||||||| ||| ||||||| || || |||||||| || || ||||| ||||| |||||||| || || | |||||| || |||||||||||    
T  94555 tttttccagattagattcctgacgtgccaccagaaagagaagttgaattctcgattgatcttgttccgggaacgaaaccagtgtcgatggc 94645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 13969891 - 13970098
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| | |||||||  |||||||||||||||||||||||||| | |||||||||||||||||    
T  13969891 gagatgaagcagctagaacgagatgggattttgatgtattctttaatggcatatttgtcgttagaaaaccaagctgtgattggcaggttaccagtggtga 13969990  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
      ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  13969991 gcgagtttcctgaagtttttccggatgagattccagatgtaccaccagaaagggaggttgagttctccatcgatctagtaccaggaacgaagccggtgtc 13970090  T
Q  206 gatggcac 213  Q
    ||||||||    
T  13970091 gatggcac 13970098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 14089031 - 14088824
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||  |||||||||||||||||||||||||| | |||||||||||||||||    
T  14089031 gagatgaagcagctagaacgagatgggattctgatgtattctttaatggcatatttgtcgttagaaaaccaagctgtgattggcaggttaccagtggtga 14088932  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |||| |||||||||||||||    
T  14088931 acgagtttcctgaagtttttccggatgagattccagatgtaccaccagaaagggaggttgagttctccatcgatctggtgccaggaacgaagccggtgtc 14088832  T
Q  206 gatggcac 213  Q
    ||||||||    
T  14088831 gatggcac 14088824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 213
Target Start/End: Complemental strand, 24189657 - 24189455
Alignment:
Q  11 gaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgag 110  Q
    |||||| |||||||| ||||| ||||||||||||||| ||||||||| |||||| || || || || |||||||| |||||||||||||||||||||||     
T  24189657 gaagcagctagaacgtgacggaattctgatgtattctttgatggcatccttgtctttggagaatcaggctgtgattgacaggttaccagtggtgaatgaa 24189558  T
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| || || ||||| || || |||| ||||||||||||||||||||    
T  24189557 tttcctgaagtttttcctgatgagattccagatgtgccaccggagagagaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatgg 24189458  T
Q  211 cac 213  Q
    |||    
T  24189457 cac 24189455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 31941234 - 31941054
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  31941234 attcttatgttttctttgatggcatctttgtcgttagaaaatcaagctgtgattgacaggttaccggtggtgaatgagtttcctgaagtttttccggatg 31941135  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||| ||||||||||| || || ||||| || || || | |||||||||||||||||||||||    
T  31941134 agattccagatgtgccaccagaaagggaggttgaattttcaattgaccttgttccgggaacgaagccggtgtcgatggcac 31941054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 13318288 - 13318480
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    |||||||| || ||||| |||| |||| |||||||||  |||| |||||| || |||||||| || ||||||||||||||||||||||| ||||||||||    
T  13318288 gaacgagatggaattcttatgttttctttgatggcatctttgttgttagagaatcaagctgtaattgacaggttaccagtggtgaatgaatttcctgaag 13318387  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||||||| |||||||| || |||| ||||||||| |||||| ||||||    
T  13318388 tttttccggatgagattccagatgtgccaccagaaagggagattgagttctcaattgatcttgttccaggaacgaagccagtgtcgctggcac 13318480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 18132144 - 18132324
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  18132144 attcttatgttttctatgatggcatatttgtcgttagaaaatcaagctgtgattgacaggtttccagtggtgaatgagtttcctgaagttttttcggatg 18132243  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||| |||| |||||||| ||||||||||| || || ||||| ||  | |||| |||||||||||||||||||||||    
T  18132244 agattccaaatgtgccaccagaaagggaggttgaattttcaattgaccttattccaggaacgaagccggtgtcgatggcac 18132324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 17188731 - 17188525
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    |||||||||| |||||||| || || ||||||||||||||| ||||||||| |||||| || || || || | |||||| ||||||||||||||||||||    
T  17188731 agatgaagcagctagaacgtgatggaattctgatgtattctttgatggcatccttgtctttggagaatcaggttgtgattgacaggttaccagtggtgaa 17188632  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
     || ||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| || || ||||| || || |||| ||||||| ||||||||    
T  17188631 cgaatttcctgaagtttttcctgatgagattccagatgtgccacctgagagagaggttgaattttcaattgaccttgttccaggaacgaagtcggtgtcg 17188532  T
Q  207 atggcac 213  Q
    |||||||    
T  17188531 atggcac 17188525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 11949706 - 11949886
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| | |||||||  |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  11949706 attcttatgttttctttaatggcatatttgtcgttagaaaatcaagctgtgattgacaggttaccagtggtgaatgaatttcctgaagtttttcctgatg 11949805  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||| | || ||||||||||| || || ||||| || || | || |||||||||||||||||||||||    
T  11949806 agattccagatgtaccatcggaaagggaggttgaattttcaattgaccttgttctaggaacgaagccggtgtcgatggcac 11949886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 31692983 - 31693163
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  |||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  31692983 attcttatgttttctttgatggcatctttgtcgttagaaaatcaagttgtgattgacaggttaccggtggtgaatgagtttcctgaagtttttccggatg 31693082  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||| |||||| |||||||| |||||||||||  | || ||||| || || || | |||||||||||||||||||||||    
T  31693083 agattctagatgtgccaccagaaagggaggttgaactttcaattgaccttgttccgggaacgaagccggtgtcgatggcac 31693163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 16832300 - 16832506
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || ||  || ||||||||||| | |||||||   |||| |||||||| ||||||||||| | ||||||||||||||||||    
T  16832300 agatgaagcagttagaacgtgatggagttttgatgtattctttaatggcatatctgtcattagaaaatcaagctgtgattgtcaggttaccagtggtgaa 16832399  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||| |||||||||||||||||||| | || ||||||||||||||||||||||| || ||||| || || || | ||| ||||||||||||    
T  16832400 tgaatttcctgaaatttttccggatgagattccatacgtgccaccagagagggaggttgagttttcgattgaccttgttccgggaacaaagccggtgtcg 16832499  T
Q  207 atggcac 213  Q
    |||||||    
T  16832500 atggcac 16832506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 39 - 213
Target Start/End: Complemental strand, 17493971 - 17493797
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| |||||||||  |||||| |||| || ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||||||||||    
T  17493971 atgttttctttgatggcatatttgtcgctagagaatcaagctgtgattgacaggttgccagttgtgaatgagtttcctgaggtttttcctgatgagattc 17493872  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| |||| ||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  17493871 cagatgtgccacaagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 17493797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 12180675 - 12180495
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| |||||| || ||||| ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||||| ||||    
T  12180675 attcttatgttttctttgatggcatacttgtcattggaaaatcaagctgtgattgacaggttgccagttgtgaatgaatttccggaagtttttcctgatg 12180576  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||| |||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||| ||||    
T  12180575 agattctagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatagcac 12180495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 13944381 - 13944175
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || ||||||||||||||||| |||||||   |||||||||||||||||| |||||| |||| | || ||||||||||    
T  13944381 agatgaagcagttagaacgggatggaattctgatgtattctctaatggcatatctgtcgttagaaaaccaagttgtgattgacaagctagcagtggtgaa 13944282  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||||||||| || || ||||| ||||||||||| ||||| || |||||||||||||| ||||| || ||||| || || || | ||| ||||||||||||    
T  13944281 tgagtttccggaggtgtttcctgatgagattcccgatgtgccgccagagagggaggtggagttttcaattgaccttgttcccggaacaaagccggtgtcg 13944182  T
Q  207 atggcac 213  Q
    |||||||    
T  13944181 atggcac 13944175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 16327498 - 16327687
Alignment:
Q  24 cgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagttt 123  Q
    ||||||||||||||||||| |||| | |||||||  |||||||||||||| |||||| |||| ||||||||||| || ||||||||||| || ||||| |    
T  16327498 cgagacgggattctgatgttttctttaatggcatatttgtcgttagaaaatcaagctatgattgacaggttacctgtagtgaatgagttcccagaagtgt 16327597  T
Q  124 ttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||||||||| ||||| |||||||||||||||||||| || |  ||||| || |  |||| ||| |||||||||||||||||||    
T  16327598 ttcctgatgagattcctgatgtgccaccagagagggaggttgaatttttaattgaccttgatccaggaacaaagccggtgtcgatggcac 16327687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 12358325 - 12358505
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  ||||||||||| || |||| |||||| || ||||| || || |||||||||||||||||||||||||||||||    
T  12358325 attcttatgttttctttgatggcatatttgtcgttagagaatcaagttgtgattgataggttgccggttgtgaatgagtttcctgaagtttttccggatg 12358424  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||| ||||||||||| || || ||||| || || |||| ||||||| ||||| |||||||||    
T  12358425 agattccagatgtgccaccagaaagggaggttgaattttcaattgaccttgttccaggaacgaagtcggtgccgatggcac 12358505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 12510269 - 12510461
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    ||||| ||||||||||||||||||||| ||||||||   |||||||||||||| |||||| || | ||||||||||| || |||||||| ||||| ||||    
T  12510269 gaacgggacgggattctgatgtattctttgatggcacaattgtcgttagaaaatcaagctatggttgacaggttacctgtagtgaatgaatttccagaag 12510368  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||||| ||||||||||| ||||| ||||||||||| |||||||| || || ||||| || || |||| |||||| || |||||||||||||    
T  12510369 tgtttcctgatgagattcctgatgtgccaccagagagagaggttgaattttcaattgaccttgttccaggaacgaatccagtgtcgatggcac 12510461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 10417831 - 10418021
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    |||||||| || ||||| |||| |||| |||||||||  ||||||||||| || |||||||||||||||||  |||||||||||||||| ||||| ||||    
T  10417831 gaacgagatggaattcttatgttttctttgatggcatcattgtcgttagagaatcaagctgtgatcgacagactaccagtggtgaatgaatttcccgaag 10417930  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
    ||||||| || |||||||| ||||| |||||||| || || ||||||||||| |||||||| || || | |||||| || |||||||||||    
T  10417931 tttttccagacgagattcctgatgtgccaccagaaagagaagttgagttctcgattgatcttgttccgggaacgaaaccagtgtcgatggc 10418021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 44779604 - 44779398
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || |||||||||| |||||| |||||||   ||||||||||||| ||||||||||| |||| | || ||||||||||    
T  44779604 agatgaagcagttagaacgtgatggaattctgatgttttctctaatggcatatctgtcgttagaaaatcaagctgtgattgacaagctagcagtggtgaa 44779505  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||||||||| || || || || ||||||||||| ||||| || |||||||||||||| ||||| || ||||| || || || | ||| ||||||||||||    
T  44779504 tgagtttccggaggtgttccctgatgagattcctgatgtgccgccagagagggaggtggagttttcaattgaccttgttcctggaacaaagccggtgtcg 44779405  T
Q  207 atggcac 213  Q
    |||||||    
T  44779404 atggcac 44779398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 16378755 - 16378907
Alignment:
Q  61 tgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagaggga 160  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || || ||||| ||||||| ||| ||||| ||||||||||||||    
T  16378755 tgtcgttagaaaaccaagctgtgattgacaagttaccagtggtgaatgagtttccggaggtgtttcctgatgagagtcctgatgtgccaccagagaggga 16378854  T
Q  161 ggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||| ||||| || ||||| || || |||| ||  |||| ||||||||||||||    
T  16378855 ggtggagttttcgattgaccttgttccaggaataaagctggtgtcgatggcac 16378907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 14291336 - 14291510
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| ||||||||| |||||| || || || ||||||||||| || || || ||| |||||||||| ||||| ||||||||||| ||||||||||    
T  14291336 atgttttctttgatggcatacttgtcattggagaatcaagctgtgattgatagatttccattggtgaatgaatttccagaagtttttcctgatgagattc 14291435  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| |||||||| ||||||||||| || || || ||||| || || | |||||||||||||||||||||||    
T  14291436 cagatgtgccaccagaaagggaggttgaattttcaatcgatcttgtgcccggaacgaagccggtgtcgatggcac 14291510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 28756647 - 28756470
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  28756647 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 28756548  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||| ||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  28756547 ttcctgatgtgccaccagaaagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 28756470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 12272653 - 12272489
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||||| |||||| || ||||| ||||||||||| |||| ||| ||||| |||||||| ||||| ||||||||||| ||||||||| ||||||| ||    
T  12272653 tgatggcatacttgtcattggaaaatcaagctgtgattgacatgttgccagttgtgaatgaatttccagaagtttttcctgatgagatttcagatgtgcc 12272554  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||| || || || ||  | || |||| ||||||| |||||||||||||||    
T  12272553 accagagagggaggttgaattttcaatcgacattgttccaggaacgaagtcggtgtcgatggcac 12272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 16826085 - 16826259
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| ||||||||| |||||| || || || |||||||||||  |||| || || || |||||||| ||| | ||||||||||| ||||||||||    
T  16826085 atgttttctttgatggcatacttgtcattggagaatcaagctgtgattaacagattgccggttgtgaatgaattttcagaagtttttcctgatgagattc 16826184  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| |||||||||||||||||||| || || ||| | || || |||| |||||||||||||||||||||||    
T  16826185 cagatgtgccaccagagagggaggttgaattttcaattaaccttgttccaggaacgaagccggtgtcgatggcac 16826259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 10408296 - 10408119
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  10408296 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 10408197  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||| |||||||| || || || || || |||| ||| |||||||||||||||||||    
T  10408196 ttcctgatgtgccaccagagagggaagttgagttttcaatagaccttgttccaggaactaagccggtgtcgatggcac 10408119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 47126272 - 47126095
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    ||||||||||| || ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  47126272 ctgatgtattccctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 47126173  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||| ||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  47126172 ttcctgatgtgccaccagaaagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 47126095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 14575301 - 14575137
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||||| |||||| |||||||| ||||||||||| |||||||| || || |||  ||| || || || |||||||| ||| ||||||||||| | ||    
T  14575301 tgatggcatacttgtcattagaaaatcaagctgtgattgacaggttgccggttgtgtgtgaattcccagaggtttttcctgattagattccagatatgcc 14575202  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||| || || |||||  | || |||| |||||||||||||||||||||||    
T  14575201 accagagagggaggttgaattttcaattgactttgttccaggaacgaagccggtgtcgatggcac 14575137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 13254969 - 13254831
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  13254969 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 13254870  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  13254869 ttgatcttgttcctggaacgaagccggtctcgatggcac 13254831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 15229918 - 15229756
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||||| ||||||||| || || ||||||||||| || || || || || |||||||| ||||| ||||||||||| ||||||||||| ||||||||    
T  15229918 tgatggcatacttgtcgttggagaatcaagctgtgattgatagattgccggttgtgaatgaatttccagaagtttttcctgatgagattcccgatgtacc 15229819  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
     |||||||| |||||||| || || |||||||| || || |  |||||||| |||||||||||    
T  15229818 gccagagagagaggttgaattttcaattgatcttgttccgggtacgaagcctgtgtcgatggc 15229756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 15235786 - 15235624
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||||| ||||||||| || || ||||||||||| || || || || || |||||||| ||||| ||||||||||| ||||||||||| ||||||||    
T  15235786 tgatggcatacttgtcgttggagaatcaagctgtgattgatagattgccggttgtgaatgaatttccagaagtttttcctgatgagattcccgatgtacc 15235687  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
     |||||||| |||||||| || || |||||||| || || |  |||||||| |||||||||||    
T  15235686 gccagagagagaggttgaattttcaattgatcttgttccgggtacgaagcctgtgtcgatggc 15235624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 16638052 - 16637914
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  16638052 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 16637953  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  16637952 ttgatcttgttcctggaacgaagccggtctcgatggcac 16637914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 26791264 - 26791402
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  26791264 caagcggtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 26791363  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  26791364 ttgatcttgttcctggaacgaagccggtctcgatggcac 26791402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 43164954 - 43164816
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  43164954 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 43164855  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  43164854 ttgatcttgttcctggaacgaagccggtctcgatggcac 43164816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 8745162 - 8745368
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || |||||||||| |||||| |||||||   ||||||||||||| ||||||||||| |||| | || ||| || |||    
T  8745162 agatgaagcagttagaacgtgatggaattctgatgttttctctaatggcatatctgtcgttagaaaatcaagctgtgattgacaagctagcagaggcgaa 8745261  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||||||||| ||    || || ||||||||||| ||||| || ||||| |||||||| ||||| || ||||| || || || | ||| ||||||||||||    
T  8745262 tgagtttccggagcggttccccgatgagattcctgatgtgccgccagaaagggaggtggagttttcaattgaccttgttcctggaacaaagccggtgtcg 8745361  T
Q  207 atggcac 213  Q
    |||||||    
T  8745362 atggcac 8745368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 12888988 - 12888850
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  12888988 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 12888889  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  12888888 ttgatcttgttcctggaacgaagccggtctcgatggcac 12888850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 15346096 - 15346234
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  15346096 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 15346195  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  15346196 ttgatcttgttcctggaacgaagccggtctcgatggcac 15346234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 15587243 - 15587381
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  15587243 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 15587342  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  15587343 ttgatcttgttcctggaacgaagccggtctcgatggcac 15587381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 20059905 - 20060043
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  20059905 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 20060004  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  20060005 ttgatcttgttcctggaacgaagccggtctcgatggcac 20060043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 48427726 - 48427588
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || ||||| || || |    
T  48427726 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgaattttcta 48427627  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  48427626 ttgatcttgttcctggaacgaagccggtctcgatggcac 48427588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 213
Target Start/End: Complemental strand, 10007864 - 10007741
Alignment:
Q  90 aggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccag 189  Q
    |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || |    
T  10007864 aggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctg 10007765  T
Q  190 aaacgaagccggtgtcgatggcac 213  Q
     |||||||||||| ||||||||||    
T  10007764 gaacgaagccggtctcgatggcac 10007741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 213
Target Start/End: Complemental strand, 10908474 - 10908351
Alignment:
Q  90 aggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccag 189  Q
    |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || |    
T  10908474 aggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctg 10908375  T
Q  190 aaacgaagccggtgtcgatggcac 213  Q
     |||||||||||| ||||||||||    
T  10908374 gaacgaagccggtctcgatggcac 10908351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 15400391 - 15400506
Alignment:
Q  98 agtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
    |||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || | |||||||    
T  15400391 agtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttccgggaacgaag 15400490  T
Q  198 ccggtgtcgatggcac 213  Q
    ||||||||||||||||    
T  15400491 ccggtgtcgatggcac 15400506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 5422781 - 5422919
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||  ||||||||||| ||||| || |||||||| || |||||||| || |    
T  5422781 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttctagatgagattcctgatgtgcctccagagagagaagttgagttttcta 5422880  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  5422881 ttgatcttgttcctggaacgaagccggtctcgatggcac 5422919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 15713907 - 15714045
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| |||| |||||| ||||| || |||||||| || |||||||| || |    
T  15713907 caagcagtgattgataggttaccggtggtgtgtgattttcctgaagtttttccagatgggattcctgatgtgcctccagagagagaagttgagttttcta 15714006  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  15714007 ttgatcttgttcctggaacgaagccggtctcgatggcac 15714045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 16694407 - 16694305
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||||||||| || ||||||||||| |||||||| || |||||||| || || | |||||||||||||| |||||    
T  16694407 tttcctgaagtttttccagatgaaattccagatgtgcctccagagagggaagttgagttttctattgatcttgttcctggaacgaagccggtgtagatgg 16694308  T
Q  211 cac 213  Q
    |||    
T  16694307 cac 16694305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 3688186 - 3688084
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || | |||||||||||| |||||||    
T  3688186 tttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaacgaagccggtctcgatgg 3688087  T
Q  211 cac 213  Q
    |||    
T  3688086 cac 3688084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 6602979 - 6602877
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||||||||| ||||| || ||||||||||| || ||||| || |||||||| || || | |||||||||||| |||||||    
T  6602979 tttcctgaagtttttccagatgagattcctgatgtgcctccagagagggaagtcgagttttctattgatcttgttcctggaacgaagccggtctcgatgg 6602880  T
Q  211 cac 213  Q
    |||    
T  6602879 cac 6602877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 14874455 - 14874557
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || |||||||| || |||||||| || |||||||| || || | ||||||||||||||||||||    
T  14874455 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 14874554  T
Q  211 cac 213  Q
    |||    
T  14874555 cac 14874557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 16754552 - 16754690
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| || ||||| || |    
T  16754552 caagcagtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccggatgagattcctgatgtgcctccagagagggaagtcgagttttcta 16754651  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | ||||| | |||| ||||||||||    
T  16754652 ttgatcttgttcctggaacgacgtcggtctcgatggcac 16754690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 15358339 - 15358224
Alignment:
Q  98 agtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
    |||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| |  |||||||| || || | |||||||    
T  15358339 agtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttgtattgatcttgttccgggaacgaag 15358240  T
Q  198 ccggtgtcgatggcac 213  Q
    |||||||| |||||||    
T  15358239 ccggtgtcaatggcac 15358224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 53382869 - 53383007
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| ||||| |||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || || ||||| || |    
T  53382869 caagcagtgattgataggctaccaatggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagtcgagttttcta 53382968  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||| ||||| ||||||||||    
T  53382969 ttgatcttgttcctggaacgaaaccggtctcgatggcac 53383007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 24185433 - 24185331
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||||||||||||  |||| ||||  ||||| || ||||||||||| |||||||| || |||||||| || || | |||||||||||||| |||||    
T  24185433 tttcctgaagtttttccaaatgaaattcatgatgtgcctccagagagggaagttgagttttctattgatcttgttcctggaacgaagccggtgttgatgg 24185334  T
Q  211 cac 213  Q
    |||    
T  24185333 cac 24185331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 16804834 - 16804936
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || | ||||||||| |||||||| || ||||||||  | |  | ||| ||||||||||||||||    
T  16804834 tttcctgaagtttttccagatgaaattcctgatgtgcctctagagagggaagttgagttttctattgatctgattcttggaacaaagccggtgtcgatgg 16804933  T
Q  211 cac 213  Q
    |||    
T  16804934 cac 16804936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 11958953 - 11959078
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||||| || || ||| ||||||||||| | |||||||  |||||||||||||| |||| |||  | ||||||||||| || |||||    
T  11958953 agatgaaacagctagaacgtgatggaattttgatgtattctttaatggcatatttgtcgttagaaaatcaagttgtagttgacaggttaccggttgtgaa 11959052  T
Q  107 tgagtttcctgaagtttttccggatg 132  Q
    ||| || || ||||| ||||| ||||    
T  11959053 tgaattcccagaagtgtttcctgatg 11959078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 14579298 - 14579389
Alignment:
Q  114 cctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    |||||||||||||| ||||| ||||| ||||| || ||||| ||||| ||||| || || |||||||| || || | ||||||||| |||||    
T  14579298 cctgaagtttttcctgatgaaattcctgatgtgcctccagaaagggaagttgaattttctattgatcttgttcctggaacgaagcctgtgtc 14579389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 15948354 - 15948415
Alignment:
Q  108 gagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagtt 169  Q
    |||||||||||||||||||||||||| ||| | ||  |||| || |||||||| ||||||||    
T  15948354 gagtttcctgaagtttttccggatgatattaccgagttaccgccggagagggaagttgagtt 15948415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 5e-71; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 21676559 - 21676766
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    ||||||||||| |||||| |||| |||||||||||||||||| | |||||||  |||||||||||||||||||||||||| |  ||||||||||||||||    
T  21676559 gagatgaagcagctagaatgagatgggattctgatgtattctttaatggcatatttgtcgttagaaaaccaagctgtgattggaaggttaccagtggtga 21676658  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||| || |||| |||||||||||||||    
T  21676659 acgagtttcctgaagtttttccggatgagattccagatgtatcaccagaaagggaggttgagttctcaatcgatctggtgccaggaacgaagccggtgtc 21676758  T
Q  206 gatggcac 213  Q
    ||||||||    
T  21676759 gatggcac 21676766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 28892682 - 28892872
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    |||||||| || ||||| |||| |||| |||||||||  ||||||||||| || |||||||||||||||||  |||||||||||||||| ||||||||||    
T  28892682 gaacgagatggaattcttatgttttctttgatggcatcattgtcgttagagaatcaagctgtgatcgacagactaccagtggtgaatgaatttcctgaag 28892781  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
    ||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||| || || | |||||| || || ||||||||    
T  28892782 tttttccagatgagattcctgatgtgccaccagaaagggaagttgagttctcgattgatcttgttccgggaacgaaaccagtatcgatggc 28892872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 20344898 - 20344718
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  ||||||| || |||||||| ||||| ||||| ||||| ||||    
T  20344898 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatgggttacctgtagtgaatgaatttccagaagtatttcctgatg 20344799  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  20344798 agattcctgatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 20344718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 23078631 - 23078837
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||||||||||  ||||||||||||||| | |||||||  |||||||||||||| |||| |||||| |||||||| || ||||||||    
T  23078631 agatgaaacagctagaacgagacgaaattctgatgtattctttaatggcatatttgtcgttagaaaatcaagttgtgattgacaggttgcctgtggtgaa 23078730  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||| | ||||| ||||| ||||||||||| ||||| |||||||| |||||||| || || || ||||| ||  | |||| ||||||||||||||||    
T  23078731 tgaattttcagaagtgtttcctgatgagattcctgatgtgccaccagaaagggaggtggaattttcaattgaccttattccaggaacgaagccggtgtcg 23078830  T
Q  207 atggcac 213  Q
    |||||||    
T  23078831 atggcac 23078837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 28921520 - 28921698
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  ||||||||||| || |||||||||||||||||  |||||||||||||||| ||||||||||||||||| ||||    
T  28921520 attcttatgttttctttgatggcatcattgtcgttagagaatcaagctgtgatcgacagactaccagtggtgaatgaatttcctgaagtttttccagatg 28921619  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
    ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| || || | |||||| || || ||||||||    
T  28921620 agattcctgatgtgccaccagaaagggaagttgagttctcgattgatcttgttccgggaacgaaaccagtatcgatggc 28921698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 24796152 - 24796329
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  24796152 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 24796251  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||| || |||| ||| |||||||||||||||||||    
T  24796252 ttcctgatgtgccaccagagagggaggttgagttctcaattgatcttgttccaggaactaagccggtgtcgatggcac 24796329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 22505295 - 22505115
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| ||||||||||| || ||| |||| ||||| ||||| ||||  ||||    
T  22505295 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgacaggttacctgtagtgcatgaatttccagaagtatttcgtgatg 22505196  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||||||||||||||||||| || || ||||| || || | || |||||||||||||||||||||||    
T  22505195 agattcctgatgtgccaccagagagggaggttgaattttcaattgacctcgttctaggaacgaagccggtgtcgatggcac 22505115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 213
Target Start/End: Complemental strand, 25850687 - 25850511
Alignment:
Q  37 tgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagat 136  Q
    ||||||||||||| ||||||   |||||||||||||| ||||||||||| ||||||||||| || |||||||| |||||  |||| ||||| ||||||||    
T  25850687 tgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgacaggttacctgtagtgaatgaatttccataagtatttcctgatgagat 25850588  T
Q  137 tccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||| ||||| |||||||||||||||||||| || || ||||| || || |||| ||| |||||||||||||||||||    
T  25850587 tcctgatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaactaagccggtgtcgatggcac 25850511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 14884746 - 14884923
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||| | ||||||   |||||||||||||| ||||||||| | ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  14884746 ctgatgtattctttaatggcacaattgtcgttagaaaatcaagctgtggttgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 14884845  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||||||||| |||||||| || |||| ||| |||||||||||||||||||    
T  14884846 ttcctgatgtgccaccagagagggaggttgagttctcaattgatcttgttccaggaactaagccggtgtcgatggcac 14884923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 20824078 - 20823906
Alignment:
Q  24 cgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagttt 123  Q
    ||||| || ||||| |||| |||| |||||||||  ||||||||||| || |||||||||||||||||  |||||||||||||||| ||||| |||||||    
T  20824078 cgagatggaattcttatgttttctttgatggcatctttgtcgttagagaatcaagctgtgatcgacagactaccagtggtgaatgaatttcccgaagttt 20823979  T
Q  124 ttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaa 196  Q
    |||| ||||||||||| ||||| |||||||| || || ||||| ||||| |||||||| || |||| ||||||    
T  20823978 ttccagatgagattcctgatgtgccaccagaaagagaagttgaattctcaattgatcttgttccaggaacgaa 20823906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 590 - 754
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    |||||||||  |||||||||||||| |||| |||||| |||||||| || || ||||||||  | |||||||||||||| ||||||||||||||||| ||    
T  590 tgatggcatctttgtcgttagaaaatcaagttgtgattgacaggttgccggttgtgaatgaaatccctgaagtttttccagatgagattccagatgtgcc 689  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||| ||||| |||||||| || || ||||| || || |||| || ||||||||||||||||||||    
T  690 accggagagagaggttgaattttcaattgaccttgttccaggaaggaagccggtgtcgatggcac 754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 17267086 - 17267266
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| |||||||   |||||| |||||||||||||||| | ||||   || ||||||||||||||||||| || || || || ||||    
T  17267086 attctgatgtattctctaatggcatatctgtcgtcagaaaaccaagctgtgtttgacaaactagcagtggtgaatgagtttccggaggtgttccctgatg 17267185  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| ||||||||||||||||| ||||| || ||||| || || || | ||| |||||||||||||||||||    
T  17267186 agattcccgatgtgccaccagagagggaggtggagttttcaattgaccttgttcccggaacaaagccggtgtcgatggcac 17267266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 23563920 - 23564100
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||| |||  || |||||||| ||||||| |||||| |||||||| ||||| ||||||||||||||||| |||||||| |||     
T  23563920 attcttatgttttctttgatgacatatttttcgttagagaaccaagttgtgattgacaggttgccagttgtgaatgagtttcctgatgtttttcctgata 23564019  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||| ||| || |||||||| || || ||||| ||  | |||| |||||||||||||||||||||||    
T  23564020 agattccagatgtgccactagaaagagaggttgaattttcaattgaccttattccaggaacgaagccggtgtcgatggcac 23564100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 27520998 - 27520860
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  27520998 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 27520899  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||||||||||||||    
T  27520898 ttgatcttgttcctggaacgaagccggtgtcgatggcac 27520860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 37541160 - 37541313
Alignment:
Q  60 ttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagaggg 159  Q
    |||||| ||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || ||||||||||| ||||| |||||||||||||    
T  37541160 ttgtcggtagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgagattcctgatgtgccaccagagaggg 37541259  T
Q  160 aggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  37541260 aggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 37541313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 16359094 - 16358956
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  16359094 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 16358995  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  16358994 ttgatcttgttcctggaacgaagccggtctcgatggcac 16358956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 34569086 - 34568948
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  34569086 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 34568987  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  34568986 ttgatcttgttcctggaacgaagccggtctcgatggcac 34568948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 41773434 - 41773296
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  41773434 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 41773335  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  41773334 ttgatcttgttcctggaacgaagccggtctcgatggcac 41773296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 20778541 - 20778381
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    |||||||| || ||||| |||| |||  |||||||||  ||||||||||| || |||| ||| || |||||  |||||||||||||||| ||||  ||||    
T  20778541 gaacgagatggaattcttatgttttcgttgatggcatcattgtcgttagagaatcaagttgtaattgacagactaccagtggtgaatgaatttcacgaag 20778442  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatct 181  Q
    ||||||| ||||||||||| ||||| |||||||| || || ||||||||||| ||||||||    
T  20778441 tttttccagatgagattcctgatgtgccaccagaaagagaagttgagttctcgattgatct 20778381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 22330696 - 22330819
Alignment:
Q  90 aggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccag 189  Q
    |||||||| ||||||  ||| ||||||||||||||||||| ||||||||||||||| || |||||||| || |||||||| || |||||||| || || |    
T  22330696 aggttacctgtggtgtgtgaatttcctgaagtttttccgggtgagattccagatgtgcctccagagagagaagttgagttttctattgatcttgttcctg 22330795  T
Q  190 aaacgaagccggtgtcgatggcac 213  Q
     |||||||||||| ||||||||||    
T  22330796 gaacgaagccggtctcgatggcac 22330819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 19772552 - 19772414
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  19772552 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 19772453  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  19772452 ttgatcttgttcctggaacgaagccggtctcgatggcac 19772414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 22350511 - 22350373
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  22350511 caagcagtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 22350412  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||||||||||||||    
T  22350411 ttgatcttgttcctggaacgaagccggtgtcgatggcac 22350373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 27666284 - 27666422
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  27666284 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 27666383  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  27666384 ttgatcttgttcctggaacgaagccggtctcgatggcac 27666422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 29473867 - 29474005
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  29473867 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 29473966  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  29473967 ttgatcttgttcctggaacgaagccggtctcgatggcac 29474005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 37289290 - 37289428
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  37289290 caagcagtgattgataggttaccggtggtgtgtgattttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 37289389  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  37289390 ttgatcttgtccctggaacgaagccggtctcgatggcac 37289428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 40711372 - 40711234
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| |||||||| || ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  40711372 caagcagtgattgacaggttcccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 40711273  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  40711272 ttgatcttgttcctggaacgaagccggtctcgatggcac 40711234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 22464566 - 22464387
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  ||||||||||| || ||||  || || || ||| |||||||||||||||| || |||||||||||||| ||||    
T  22464566 attcttatgttttctttgatggcatctttgtcgttagagaatcaagtggtaattga-aggctaccagtggtgaatgaattccctgaagtttttccagatg 22464468  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| || ||||| |||||||| || || ||||||||||| |||||||| || |  | |||||| || |||||||||||||    
T  22464467 agatccctgatgtgccaccagaaagagaagttgagttctcgattgatcttgttctgggaacgaaaccagtgtcgatggcac 22464387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 27683194 - 27683332
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  27683194 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 27683293  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || |  | |||||||||||| ||||||||||    
T  27683294 ttgatcttgtccttggaacgaagccggtctcgatggcac 27683332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 14997533 - 14997671
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||| | ||||| || || ||||| || |||||||| || |    
T  14997533 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagatttctgatgtgcctcctgagagagaagttgagttttcta 14997632  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  14997633 ttgatcttgtccctggaacgaagccggtctcgatggcac 14997671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 22137224 - 22137122
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || | |||||||||| |||||||||    
T  22137224 tttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaacgaagccgatgtcgatgg 22137125  T
Q  211 cac 213  Q
    |||    
T  22137124 cac 22137122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 27612948 - 27612808
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggag--gttgagttctc 172  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| |||  |||||||| ||    
T  27612948 caagcggtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagagaagttgagttttc 27612849  T
Q  173 cattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
     |||||||| || || | || ||||||||| ||||||||||    
T  27612848 tattgatcttgttcctggaatgaagccggtctcgatggcac 27612808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 22233649 - 22233805
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  ||||||| || || ||||| |||| |||  ||||||| | ||| ||| | || ||||||| |||||| || || || || || ||||||||    
T  22233649 tgaagcagttagaacgtgatggaattctaatgttttccttgatggcgtacttatcgatggagaaccaagttgtgattgatagtttgccggttgtgaatga 22233748  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttga 166  Q
     ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  22233749 atttccggaagtttttcctgatgagattccggatgtaccaccagagagggaagttga 22233805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 213
Target Start/End: Original strand, 21983906 - 21984109
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||| ||||||| || |||||  | |||| |||| | ||||||| ||||||| | || || |||||| |||| || || ||  | || ||||||||    
T  21983906 tgaagcaattagaacgtgatgggatcttaatgttttctttaatggcatacttgtcggtggagaatcaagctatgattgatagattggcggttgtgaatga 21984005  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
     ||||| ||||||||||| ||||||||||| ||||| ||  |||||||||| ||||| || || |||||||| || || |  |||||||| |||||||||    
T  21984006 atttccagaagtttttcctgatgagattcctgatgtgccgtcagagagggaagttgaattttcaattgatcttgttccgggtacgaagccagtgtcgatg 21984105  T
Q  210 gcac 213  Q
    ||||    
T  21984106 gcac 21984109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 18781670 - 18781568
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| || ||||| || |||||||| || || | ||||||||||||||| ||||    
T  18781670 tttcctgaagtttttccagatgaaattcctgatgttcctccagagagggaagtcgagttttctattgatcttgttcctggaacgaagccggtgtccatgg 18781571  T
Q  211 cac 213  Q
    |||    
T  18781570 cac 18781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 210
Target Start/End: Original strand, 21561795 - 21561954
Alignment:
Q  51 atggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccac 150  Q
    ||||||| ||||||| | || || ||||||||||| || || ||||| || |||||||| ||||| ||||||||||| |||||||||||  |||| |  |    
T  21561795 atggcatacttgtcggtggagaatcaagctgtgattgatagattaccggttgtgaatgaatttccagaagtttttcctgatgagattcctcatgtgcagc 21561894  T
Q  151 cagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||||| ||||| || || |||||||| || |  |  |||||||| ||||||||||    
T  21561895 cagagagggaagttgaattttcaattgatcttgttctgggtacgaagcctgtgtcgatgg 21561954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 20803153 - 20803051
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||| ||||| ||||| ||||| ||||| || |||||||| || || ||||| ||  ||||||| || || | ||||||||||||||||||||    
T  20803153 tttcctgaagtatttccagatgaaattcctgatgtgcctccagagagagaagtcgagttttctgttgatcttgttcctggaacgaagccggtgtcgatgg 20803054  T
Q  211 cac 213  Q
    |||    
T  20803053 cac 20803051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 21409726 - 21409641
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagaggga 160  Q
    ||||| ||||| || | ||||| |||||||  ||| ||||| ||||||||||  ||||| ||||| ||||| ||||||||||||||    
T  21409726 caagcggtgattgataagttacaagtggtgtgtgaatttccagaagtttttcttgatgaaattcctgatgtgccaccagagaggga 21409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 21609 - 21402
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    ||||||||||| |||||||| || || ||||||||||||||  | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  21609 gagatgaagcagctagaacgtgatggaattctgatgtattccttaatggcatgtttgtcgttagaaaaccaagctgtgattgacaggttaccagtggtga 21510  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||| || ||| |||| || || ||||| || ||||||| |||||||||||||||    
T  21509 atgagtttcctgaagttttttcggatgagattccagacgtaccaccagaaagagagattgaattttcaattgaccttgtaccaggaacgaagccggtgtc 21410  T
Q  206 gatggcac 213  Q
    ||||||||    
T  21409 gatggcac 21402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 79378 - 79585
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || ||| ||||||||||| | |||||||  ||||| |||||||| ||||||||||| || |||||||||||||||||    
T  79378 agatgaaacaactagaacgtgatggaattttgatgtattctttaatggcatatttgtcattagaaaatcaagctgtgattgataggttaccagtggtgaa 79477  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || || |||| ||||||||||||||||    
T  79478 tgaatttcctgaagtttttccggatgagattccagatgtgccaccagagagggaggttgagttctccatcgaccttgttccaggaacgaagccggtgtcg 79577  T
Q  207 atggcaca 214  Q
    ||||||||    
T  79578 atggcaca 79585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 213
Target Start/End: Complemental strand, 60473 - 60290
Alignment:
Q  30 gggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccgg 129  Q
    |||||| | |||| |||| ||||||||| ||| || || || || ||||| ||||| || || || || || |||||||| ||||| ||||||||||| |    
T  60473 gggattttaatgttttctttgatggcatacttatcttttgagaatcaagcagtgattgatagattgccggttgtgaatgaatttccggaagtttttcctg 60374  T
Q  130 atgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||  |||| |||||||||||||||||||| || || || ||||| || || | |||||||||||||||||||||||    
T  60373 atgagattccttatgtgccaccagagagggaggttgaattttcaatcgatcttgtgcccggaacgaagccggtgtcgatggcac 60290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 8371 - 8165
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || ||| ||||||||||| | |||||||  |||||||||||||| |||||||| || ||||||||||||||||||||    
T  8371 agatgaaacaactagaacgtgatggaattttgatgtattctttaatggcatatttgtcgttagaaaatcaagctgtaattgacaggttaccagtggtgaa 8272  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||| || || || |||| ||||||||||||||||    
T  8271 tgaatttcctgaagtttttcctgatgagattccatatgtgccaccagagagggaggttgagttctccatcgaccttgttccaggaacgaagccggtgtcg 8172  T
Q  207 atggcac 213  Q
    |||||||    
T  8171 atggcac 8165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 1402 - 1196
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || ||| ||||||||||| | |||||||  |||||||||||||| |||||||| || | ||||||||||||||||||    
T  1402 agatgaaacaactagaacgtgatggaattttgatgtattctttaatggcatatttgtcgttagaaaatcaagctgtaattggcaggttaccagtggtgaa 1303  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||| || || || |||| ||||||||||||||||    
T  1302 tgaatttcctgaagtttttccagatgagattccatatgtgccaccagagagggaggttgagttctccatcgaccttgttccaggaacgaagccggtgtcg 1203  T
Q  207 atggcac 213  Q
    |||||||    
T  1202 atggcac 1196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 22028267 - 22028473
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || ||||||||| ||||| | |||||||  ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  22028267 agatgaaacaactagaacgtgatggaattctgatgcattctttaatggcatatttgtcgttagaaaaccaagttgtgattgacaggttaccagtggtgaa 22028366  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| ||||| || || || | ||||||||||||||||    
T  22028367 tgaatttcctgaagtttttctggatgagattccaaatgtaccactagagagggaggttgagttctcaattgaccttgttccgggaacgaagccggtgtcg 22028466  T
Q  207 atggcac 213  Q
    |||||||    
T  22028467 atggcac 22028473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 16269237 - 16269417
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| |||| |||||| ||||||||||| || |||||||| ||||| ||||| ||||| ||||    
T  16269237 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagttgtgattgacaggttacctgtagtgaatgaatttccagaagtatttcctgatg 16269336  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| ||||||||||| |||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  16269337 agattcctgatgtgccaccagagagagaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 16269417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 21323308 - 21323472
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    |||||||||  |||||||||||||| ||||||||||| || ||||| || || |||||||| ||||| ||||||||||| ||||||||||||||||| ||    
T  21323308 tgatggcatctttgtcgttagaaaatcaagctgtgattgataggttgccggttgtgaatgaatttccagaagtttttcctgatgagattccagatgtgcc 21323407  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||| || || ||||| || || |||  |||||||||||||||||||||||    
T  21323408 accagagagggaggttgaattttcaattgaccttgttccatgaacgaagccggtgtcgatggcac 21323472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 28983676 - 28983499
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||| | ||  | ||||| || |||||||||||||| |||||||| || ||||| |    
T  28983676 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtggttgatggtttacctgtagtgaatgagtttccagaagttttccctgatgaaa 28983577  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||| ||||| |||||||| || |||| ||| |||||||||||||||||||    
T  28983576 ttcctgatgtgccaccagagagggaggttgaattctcaattgatcttgttccaggaactaagccggtgtcgatggcac 28983499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 28988895 - 28988718
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||| | ||  | ||||| || |||||||||||||| |||||||| || ||||| |    
T  28988895 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtggttgatggtttacctgtagtgaatgagtttccagaagttttccctgatgaaa 28988796  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||| ||||| |||||||| || |||| ||| |||||||||||||||||||    
T  28988795 ttcctgatgtgccaccagagagggaggttgaattctcaattgatcttgttccaggaactaagccggtgtcgatggcac 28988718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 22053657 - 22053450
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccag-tggtga 105  Q
    ||||||| || |||||||| ||||||||| ||||||||||||||||| | |  || ||  ||||||| |||||| |||| || |||||||| | | ||||    
T  22053657 agatgaaacagctagaacgggacgggattttgatgtattctctgatgacttatttatctgtagaaaatcaagctatgattgataggttacccggttgtga 22053558  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    |||| ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||| ||||    
T  22053557 atgaatttccagaagtgtttcctgatgagattcctgatgtgccaccagagagggaggttgaattttcaattgaccttgtcccaggaacgaagccgatgtc 22053458  T
Q  206 gatggcac 213  Q
    ||||||||    
T  22053457 gatggcac 22053450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 213
Target Start/End: Complemental strand, 19984930 - 19984768
Alignment:
Q  51 atggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccac 150  Q
    ||||||| ||||||||| || || |||| |||||| || || || ||||| |||||||| ||||| ||||||||||| ||||||||||| ||||| ||||    
T  19984930 atggcatacttgtcgttggagaatcaagttgtgattgatagattgccagttgtgaatgaatttccagaagtttttcctgatgagattcctgatgtgccac 19984831  T
Q  151 cagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||| || || |||||||| || || | |||||||||||||||||||||||    
T  19984830 cagagagggaggttgaattttcaattgatcttgttcccggaacgaagccggtgtcgatggcac 19984768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 213
Target Start/End: Original strand, 31568832 - 31569036
Alignment:
Q  9 atgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatg 108  Q
    ||||||||  ||||||| || || |||||||||| |||||| |||||||   ||||||||||||| ||||||||||| |||| | || | ||||||||||    
T  31568832 atgaagcagttagaacgtgatggaattctgatgttttctctaatggcatatctgtcgttagaaaatcaagctgtgattgacaagctagcggtggtgaatg 31568931  T
Q  109 agtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgat 208  Q
    ||||||| || || || || ||||||||||| ||||| || |||||||||||||| ||||| || ||||| || || || | ||| ||||||||||||||    
T  31568932 agtttccggaggtgttccctgatgagattcctgatgtgccgccagagagggaggtggagttttcaattgaccttgttcctggaacaaagccggtgtcgat 31569031  T
Q  209 ggcac 213  Q
    |||||    
T  31569032 ggcac 31569036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 27357316 - 27357129
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    ||||| ||||||||||||||||||||||| ||||||   |||||||||||||| ||||||||||| |   ||||||| || ||| |||| ||| | ||||    
T  27357316 gaacgggacgggattctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgtttggttacctgtagtgtatgaattttcagaag 27357217  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgat 208  Q
    ||||||| |||||||||||  |||| |||||| ||||||||||||| || || ||||| || || |||| ||||||||| ||||||||    
T  27357216 tttttcctgatgagattccttatgtgccaccatagagggaggttgaattttcaattgaccttgttccaggaacgaagccagtgtcgat 27357129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 213
Target Start/End: Complemental strand, 21928219 - 21928016
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  ||||||| || |||||| | |||| |||| ||||||||| |||||| || || || ||||||||||| || || || || || ||||||||    
T  21928219 tgaagcagttagaacgtgatgggattttaatgttttctttgatggcatacttgtcattggagaatcaagctgtgattgatagatttccggttgtgaatga 21928120  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
     ||||| |||||||||||  |||||||||| ||||| |||||||||||||||||| | || || |||||||| || ||   |||||||||||||||||||    
T  21928119 atttccagaagtttttcctaatgagattcctgatgtgccaccagagagggaggttaaattttcaattgatcttgttcccagaacgaagccggtgtcgatg 21928020  T
Q  210 gcac 213  Q
    ||||    
T  21928019 gcac 21928016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 19115126 - 19114988
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || ||||| || || |    
T  19115126 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgaattttcta 19115027  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || ||   |||||||||||| ||||||||||    
T  19115026 ttgatcttgttcctagaacgaagccggtctcgatggcac 19114988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 20016318 - 20016456
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| |||| |||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  20016318 caagcggtgattgataggttaccggtggtgtgtgaatttcttgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 20016417  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  20016418 ttgatcttgttcctggaacgaagccggtctcgatggcac 20016456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 17672077 - 17672216
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  17672077 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 17672176  T
Q  175 ttgatctagtacc-agaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || ||  | |||||||||||| ||||||||||    
T  17672177 ttgatcttgttccttggaacgaagccggtctcgatggcac 17672216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 22373568 - 22373457
Alignment:
Q  102 gtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccgg 201  Q
    |||||||| ||||| || |||||||| ||||||||||  ||||| |||||||||||||||||||| || || |||||||| || || | ||||||||||     
T  22373568 gtgaatgaatttccagatgtttttcctgatgagattcatgatgtgccaccagagagggaggttgaattttcaattgatcttgttcccggaacgaagccgc 22373469  T
Q  202 tgtcgatggcac 213  Q
    ||||||||||||    
T  22373468 tgtcgatggcac 22373457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 22118230 - 22118368
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||| ||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  22118230 caagcagtgattgataggttaccggtggtgtgtgattttcctgaagtctttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 22118329  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||| ||||    
T  22118330 ttgatcttgttcctggaacgaagccggtctcgatcgcac 22118368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 22127014 - 22127152
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||| ||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  22127014 caagcagtgattgataggttaccggtggtgtgtgattttcctgaagtctttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 22127113  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||| ||||    
T  22127114 ttgatcttgttcctggaacgaagccggtctcgatcgcac 22127152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 30311235 - 30311337
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||| ||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||| || |||||||| || || | ||||||||||||||||||||    
T  30311235 tttcccgaagtttttccagatgaaattcctgatgtgcctccagagagggaagttgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 30311334  T
Q  211 cac 213  Q
    |||    
T  30311335 cac 30311337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 31414530 - 31414648
Alignment:
Q  18 ctagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctg 117  Q
    |||||||| || || ||||||||||||||| | |||||||  |||||||||||||| ||||||| ||| || ||||| |||||||||||||| ||||| |    
T  31414530 ctagaacgtgatggaattctgatgtattctttaatggcatatttgtcgttagaaaatcaagctgagattgataggttgccagtggtgaatgaatttccag 31414629  T
Q  118 aagtttttccggatgagat 136  Q
    |||| || || ||||||||    
T  31414630 aagtgttccctgatgagat 31414648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 15536073 - 15535971
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| || |||||||| || || | ||||||||||||||||||||    
T  15536073 tttcctgaagtttttccagatgaaattcctgatgtgcctccagaaagggaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 15535974  T
Q  211 cac 213  Q
    |||    
T  15535973 cac 15535971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 18859267 - 18859165
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || ||   |||||||||||| |||||||    
T  18859267 tttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctagaacgaagccggtctcgatgg 18859168  T
Q  211 cac 213  Q
    |||    
T  18859167 cac 18859165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 19482127 - 19482265
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || || ||||| || |    
T  19482127 caagcagtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagtcgagttttcta 19482226  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||| ||||| ||||||||||    
T  19482227 ttgatcttgttcctggaacgaaaccggtctcgatggcac 19482265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 19980657 - 19980555
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| |||||  | |||||||| || |||||||| || | |||||| || || | ||||||||| ||||||||||    
T  19980657 tttcctgaagtttttccagatgaaattcctgatgtgtctccagagagagaagttgagttttctaatgatcttgttcctggaacgaagcccgtgtcgatgg 19980558  T
Q  211 cac 213  Q
    |||    
T  19980557 cac 19980555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 21164629 - 21164731
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || | |||||| || |||||||| || ||||||||  | || | |||| |||||||||||||||    
T  21164629 tttcctgaagtttttccagatgaaattcctgatgtgcctctagagagagaagttgagttttctattgatcttattcctggaacggagccggtgtcgatgg 21164728  T
Q  211 cac 213  Q
    |||    
T  21164729 cac 21164731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 32602835 - 32602733
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||||||||||||  |||| ||||| ||||| || ||||| ||||| || || || || |||||||| || || | ||||||||||||||||||||    
T  32602835 tttcctgaagtttttccaaatgaaattcctgatgtgcctccagaaagggaagtcgaattttctattgatcttgttcctggaacgaagccggtgtcgatgg 32602736  T
Q  211 cac 213  Q
    |||    
T  32602735 cac 32602733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 19864184 - 19864278
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||||| ||||||||||| ||||| ||||| ||||| || |||||||| || |||||||| || |||||||| || || | ||||||||| |||||    
T  19864184 tttccagaagtttttcctgatgaaattcctgatgtgcctccagagagagaagttgagttttcgattgatcttgttcctggaacgaagcctgtgtc 19864278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 20394221 - 20394294
Alignment:
Q  108 gagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatct 181  Q
    |||||||| |||||||||||  |||||||||| ||||| |||| ||||||||| ||||| || || ||||||||    
T  20394221 gagtttccagaagtttttccttatgagattcctgatgtgccactagagagggaagttgaattttcgattgatct 20394294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 211
Target Start/End: Complemental strand, 20390791 - 20390676
Alignment:
Q  96 ccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacga 195  Q
    ||||| |||||| | ||||| ||||||||||  |||||||| || ||||| || ||||||||||| ||||| || || |||||||| || || |  ||||    
T  20390791 ccagttgtgaataaatttccagaagtttttcatgatgagatccctgatgtgccgccagagagggaagttgaattttcaattgatcttgttccgggtacga 20390692  T
Q  196 agccggtgtcgatggc 211  Q
     || ||||||||||||    
T  20390691 tgctggtgtcgatggc 20390676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 21391952 - 21392010
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagtt 169  Q
    ||||| ||||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||    
T  21391952 tttccagaagtttttcctgatgaaattcctgatgtgcctccagagagggaagttgagtt 21392010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 21781278 - 21781336
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagtt 169  Q
    ||||| ||||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||    
T  21781278 tttccagaagtttttcctgatgaaattcctgatgtgcctccagagagggaagttgagtt 21781336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 21786446 - 21786504
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagtt 169  Q
    ||||| ||||||||||| ||||| ||||| ||||| || ||||||||||| ||||||||    
T  21786446 tttccagaagtttttcctgatgaaattcctgatgtgcctccagagagggaagttgagtt 21786504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 22042517 - 22042415
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||||||||||   ||||| ||||| ||||| || ||  |||| || || ||||| || |||||||| || || | ||||||||||||||||||||    
T  22042517 tttcctgaagtttttttagatgaaattcctgatgtgcctcctaagagagaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 22042418  T
Q  211 cac 213  Q
    |||    
T  22042417 cac 22042415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 7 - 212
Target Start/End: Original strand, 18030 - 18235
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||| | || |||||||||||||| ||| | || |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  18030 agatgaaacagctagaaagtgatgggattctgatgtactctttaatagcatacttgtcgttagaaaatcaagttgtgattgacaggttaccagtggtgaa 18129  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || || |||| ||||||||||||||||    
T  18130 tgaatttcctgaagtatttccggatgagattccagatgtgccaccagagagggaggttgagttctccatcgaccttgtcccaggaacgaagccggtgtcg 18229  T
Q  207 atggca 212  Q
    ||||||    
T  18230 atggca 18235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 5396 - 5602
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||| ||||| || || ||| ||||||||||| | |||||||  ||||| |||||||| ||||||||||| ||||||||| ||||||||||    
T  5396 agatgaaacaacttgaacgtgatggaattttgatgtattctttaatggcatatttgtcattagaaaatcaagctgtgattgacaggttatcagtggtgaa 5495  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| || || || |||| ||||||||||||||||    
T  5496 tgaatttcctgaagttttttcgggtgagattccagatgtgccaccagagagggaggttgagttctccatcgaccttgttccaggaacgaagccggtgtcg 5595  T
Q  207 atggcac 213  Q
    |||||||    
T  5596 atggcac 5602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 34 - 213
Target Start/End: Original strand, 48088 - 48267
Alignment:
Q  34 ttctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatga 133  Q
    |||| |||| |||| | |||||||  |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||    
T  48088 ttcttatgttttctttaatggcatatttgttgttagaaaaccaagctgtgattggcaggttaccagtggtgaacgagtttcctgaagtttttccggatga 48187  T
Q  134 gattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| || |||| |||||||||||||||||||||||    
T  48188 gattccagatgtaccaccagaaagggaggttgagttctccatcgatctggtgccaggaacgaagccggtgtcgatggcac 48267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 53397 - 53278
Alignment:
Q  94 taccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaac 193  Q
    |||||||||||  ||| ||||||||||||||||| ||||||||||| ||||| || | |||||| || || ||||| || |||||||| || |  | |||    
T  53397 taccagtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctctagagagagaagtcgagttttctattgatcttgttcttggaac 53298  T
Q  194 gaagccggtgtcgatggcac 213  Q
    ||||||||||||||||||||    
T  53297 gaagccggtgtcgatggcac 53278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 17603 - 17489
Alignment:
Q  98 agtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
    |||||||  ||| ||||||||||||||||| ||||||||||| | ||| || |||||||| || || ||||| || |||||||| || || | |||||||    
T  17603 agtggtgtgtgaatttcctgaagtttttccagatgagattcctg-tgtgcctccagagagagaagtcgagttttctattgatcttgttcctggaacgaag 17505  T
Q  198 ccggtgtcgatggcac 213  Q
    ||||||||||||||||    
T  17504 ccggtgtcgatggcac 17489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 119; Significance: 6e-61; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 39815 - 39609
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || ||| ||||||||||| | ||||||   |||||||||||||| ||||||||||| || |||||||||||||||||    
T  39815 agatgaaacaactagaacgtgatggaattttgatgtattctttaatggcaaatttgtcgttagaaaatcaagctgtgattgataggttaccagtggtgaa 39716  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| || || || |||| ||||||| ||||||||    
T  39715 tgaatttcctgaagtttttcaggatgagattccagatgtgccaccagagagggaggttgagttctccatcgaccttgttccaggaacgaagtcggtgtcg 39616  T
Q  207 atggcac 213  Q
    |||||||    
T  39615 atggcac 39609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 22483 - 22427
Alignment:
Q  157 gggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||||| || || || |||| |||||||||||||||||||||||    
T  22483 gggaggttgagttctccatcgaccttgttccaggaacgaagccggtgtcgatggcac 22427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 17992 - 18062
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatct 181  Q
    ||||| ||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||| || ||||||||    
T  17992 tttccagaagtttttcccgatgaaattcctgatgtgcctccagagagggaagttgagttttcgattgatct 18062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 4e-59; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 20833542 - 20833721
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  |||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  20833542 attcttatgttttctttgatggcatctttgtcgttagaaaatcaagctgtgattgacaggttactagtggtgaatgagtttcctgaagttttttcggatg 20833641  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggca 212  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| || || || | ||||||||||||||||||||||    
T  20833642 agattccagatgtaccaccagagagggaggttgagttttcaattgaccttgttccgggaacgaagccggtgtcgatggca 20833721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 24097231 - 24097437
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||||| || || ||||||||||||||| | |||||||  |||||||||||||| |||||| |||| |||||||| |||||||||||    
T  24097231 agatgaaacagctagaacgtgatggaattctgatgtattctttaatggcatatttgtcgttagaaaatcaagctttgattgacaggttgccagtggtgaa 24097330  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| |||||  |||| ||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||| || || |||| ||| ||||||||||||    
T  24097331 tgaatttccataagtgtttcctgatgagattcctgatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacaaagccggtgtcg 24097430  T
Q  207 atggcac 213  Q
    |||||||    
T  24097431 atggcac 24097437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 20297129 - 20296949
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| || |||||||| || |||||||| |||||  |||| ||||| ||||    
T  20297129 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgataggttacctgtagtgaatgaatttccaaaagtatttcctgatg 20297030  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||||| ||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  20297029 agattcctgatgtgccaccaaagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 20296949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 20854390 - 20854582
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    |||||||| || ||||| |||| |||| |||||||||  ||||||||||| || |||||||| || |||||| |||||||||||||||| || |||||||    
T  20854390 gaacgagatggaattcttatgttttctttgatggcatctttgtcgttagagaatcaagctgtaattgacaggctaccagtggtgaatgaattccctgaag 20854489  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||||||||| ||||| |||||||| || || ||||||||||| |||||||| || || | |||||| || |||||||||||||    
T  20854490 tttttccagatgagattcctgatgtgccaccagaaagagaagttgagttctcgattgatcttgttccgggaacgaaaccagtgtcgatggcac 20854582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 21953626 - 21953446
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||| ||||| ||||| ||||    
T  21953626 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgacaggttacctgtagtgaatgaatttccggaagtgtttcctgatg 21953527  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||| ||| ||||||||||| || || ||||| || || |||| ||| |||||||||||||||||||    
T  21953526 agattcctgatgtgccactagatagggaggttgaattttcaattgaccttgttccaggaacaaagccggtgtcgatggcac 21953446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 31537639 - 31537819
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| ||||| ||||    
T  31537639 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtatttcctgatg 31537738  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  31537739 agattcctgatgtgccaccagagagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 31537819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 213
Target Start/End: Complemental strand, 19857028 - 19856842
Alignment:
Q  27 gacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttc 126  Q
    ||||| ||||| |||| |||| | | |||||  ||||||||||| || |||||| |||| |||||||| ||||| ||||||||||||||| | |||||||    
T  19857028 gacggaattcttatgttttctttaaaggcatatttgtcgttagagaatcaagctatgattgacaggttgccagttgtgaatgagtttcctcatgtttttc 19856929  T
Q  127 cggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||||| ||||||||||| |||||||| || || ||||| || || |||  |||||||||||||||||||||||    
T  19856928 cggatgagattccagatgtgccaccagagagagaggttgaattttcaattgaccttgttccaagaacgaagccggtgtcgatggcac 19856842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 38910471 - 38910648
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| |||||  |||| ||||| |||||||    
T  38910471 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccataagtatttcctgatgaga 38910570  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  38910571 ttcctgatgtgccaccagagagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 38910648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 48425618 - 48425441
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  48425618 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 48425519  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  48425518 ttcctgatgtgccaccagagagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 48425441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 52988486 - 52988309
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  52988486 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 52988387  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  52988386 ttcctgatgtgccaccagagagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 52988309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 22016403 - 22016567
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||||| | |||| || ||||| ||||||||||| |||||||| ||||| |||||||| |||||  |||||||||| ||||||||||||||||| ||    
T  22016403 tgatggcatacatgtcattggaaaatcaagctgtgattgacaggttgccagttgtgaatgaatttccataagtttttcctgatgagattccagatgtgcc 22016502  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||| ||||| || || ||||| || || |||| |||||||||||||||||| ||||    
T  22016503 accagagagggacgttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatagcac 22016567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 213
Target Start/End: Complemental strand, 37679795 - 37679617
Alignment:
Q  35 tctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgag 134  Q
    ||||||||||||||| |||||    |||||||||||||| |||| |||||| ||  | ||||| || |||||||| ||||| ||||| ||||| ||||||    
T  37679795 tctgatgtattctctaatggcgcaattgtcgttagaaaatcaagttgtgattgatggtttacctgtagtgaatgaatttccagaagtgtttcctgatgag 37679696  T
Q  135 attccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||| ||||| |||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  37679695 attcctgatgtgccaccagagagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 37679617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 21739678 - 21739858
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| |||||| || || || ||||||||||| || |  || || || |||||||| ||||| ||||||||||| ||||    
T  21739678 attctaatgttttctttgatggcatacttgtcattggagaatcaagctgtgattgataaattgccggttgtgaatgaatttccggaagtttttcctgatg 21739777  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||||||||||||||| || || || ||||| || || | |||||||||||||||||||||||    
T  21739778 agattccagatgtgccaccagagagggaggttgaattttctatcgatcttgttcccggaacgaagccggtgtcgatggcac 21739858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 213
Target Start/End: Complemental strand, 41311297 - 41311094
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  ||||||| || || ||| | |||| |||| ||||||| | ||||||||| || || ||||||||||| || || ||||| || |||| |||    
T  41311297 tgaagcagttagaacgtgatggaattataatgttttctttgatggcgtacttgtcgttggagaatcaagctgtgattgatagattaccggttgtgagtga 41311198  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
     ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| | || || || ||||| || || | ||||||||||||||| |||    
T  41311197 atttccagaagtttttcctgatgagattccagatgtgccaccagagagggaggttaaattttcaatcgatcttgtgcctggaacgaagccggtgtccatg 41311098  T
Q  210 gcac 213  Q
    ||||    
T  41311097 gcac 41311094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 21832977 - 21832839
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  21832977 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 21832878  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  21832877 ttgatcttgtccctggaacgaagccggtctcgatggcac 21832839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 51331173 - 51331314
Alignment:
Q  72 aaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttct 171  Q
    |||||||| ||||| |||||||| || ||||||  ||| || |||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| |    
T  51331173 aaccaagcagtgattgacaggttgccggtggtgtgtgaattccctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagtttt 51331272  T
Q  172 ccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | |||||||| || || | |||||||||||| ||||||||||    
T  51331273 ctattgatcttgttcctggaacgaagccggtctcgatggcac 51331314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 33388719 - 33388851
Alignment:
Q  81 gtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatc 180  Q
    ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||    
T  33388719 gtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatc 33388818  T
Q  181 tagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | || || | |||||||||||| ||||||||||    
T  33388819 ttgttcctggaacgaagccggtctcgatggcac 33388851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 16348315 - 16348417
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || | |||||||||||| |||||||    
T  16348315 tttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaacgaagccggtctcgatgg 16348414  T
Q  211 cac 213  Q
    |||    
T  16348415 cac 16348417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 21743200 - 21743374
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| |||||||||  ||||| || || || ||||||||||| || || || || || |||| ||| ||||| |||||||||||  |||||||||    
T  21743200 atgttttctttgatggcatagttgtcattggagaatcaagctgtgattgatagatttccggttgtgagtgaatttccagaagtttttcctcatgagattc 21743299  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| |||||||||||  ||||||| || || || |||||  | || | |||||||||||||||||||||||    
T  21743300 cagatgtgccaccagagagaaaggttgaattttcaatcgatcttatgcccggaacgaagccggtgtcgatggcac 21743374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 21839589 - 21839487
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || | |||||||||||| |||||||    
T  21839589 tttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaacgaagccggtctcgatgg 21839490  T
Q  211 cac 213  Q
    |||    
T  21839489 cac 21839487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 41351352 - 41351490
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || || ||||| || |    
T  41351352 caagcagtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagtcgagttttcta 41351451  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||| ||||| ||||||||||    
T  41351452 ttgatcttgttcctggaacgaaaccggtctcgatggcac 41351490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 21233451 - 21233552
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || | ||||||||| || ||||| || |||||||| || || | ||||||||||||||||||||    
T  21233451 tttcctgaagtttttccagatgaaattcctgatgtgcctctagagagggaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 21233550  T
Q  211 ca 212  Q
    ||    
T  21233551 ca 21233552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 17042735 - 17042837
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||| ||||| || || || || |||||||| || || | ||||||||||||||||||||    
T  17042735 tttcctgaagtttttccagatgaaattcctgatgtgcctccagaaagggaagtcgaattttctattgatcttgttcctggaacgaagccggtgtcgatgg 17042834  T
Q  211 cac 213  Q
    |||    
T  17042835 cac 17042837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 19109007 - 19108905
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||| ||||| || ||||| || ||| |||| || || | ||||||||||||||||||||    
T  19109007 tttcctgaagtttttccagatgaaattcctgatgtgcctccagaaagggaagtcgagttttctattaatcttgttcctggaacgaagccggtgtcgatgg 19108908  T
Q  211 cac 213  Q
    |||    
T  19108907 cac 19108905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 22503013 - 22503111
Alignment:
Q  115 ctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| ||||| ||||| ||||| ||  ||||||| || |||||||| || |||||||| || |  | |||||||||||||||||||||||    
T  22503013 ctgaagtttttccagatgaaattcctgatgtgccttcagagagagaagttgagttttctattgatcttgttcttggaacgaagccggtgtcgatggcac 22503111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 12200263 - 12200214
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgat 85  Q
    |||||||||||||| ||||||   |||||||||||||| |||||||||||    
T  12200263 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgat 12200214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 7501 - 7295
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||||||||||| || || ||||| |||| |||| ||||||||| ||||||||||||||| |||||||||||  ||||||| ||||| |||||    
T  7501 agatgaagcaactagaacgtgatggaattctcatgttttctttgatggcatacttgtcgttagaaaatcaagctgtgattaacaggttgccagttgtgaa 7402  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||| | ||||||||||| ||||||||||| |||||||||||||||||||||||||| || || ||||| || || |||| ||||||||||||||||    
T  7401 tgaattttcagaagtttttcctgatgagattcccgatgtaccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcg 7302  T
Q  207 atggcac 213  Q
    |||||||    
T  7301 atggcac 7295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 262983 - 262777
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || ||||||||||||||| | |||||||  |||||||||||||| || |||||||| ||||||||||||||||||||    
T  262983 agatgaagcagttagaacgtgatggaattctgatgtattctttaatggcatatttgtcgttagaaaatcaggctgtgattgacaggttaccagtggtgaa 262884  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| || || || | ||| |||||| |||||    
T  262883 tgaatttcctgaagtttttccggatgagattccagacgtgccaccagacagggaggttgagttttccattgaccttgttccgggaacaaagccgatgtcg 262784  T
Q  207 atggcac 213  Q
    |||||||    
T  262783 atggcac 262777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 151282 - 151118
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    |||||||||  |||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  151282 tgatggcatatttgtcgttagaaaatcaagctgtgattgacaggttgccagttgtgaatgagtttcctgaagtttttccggatgagattccagatgtgcc 151183  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  151182 accagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 151118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 204 - 12
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    ||||| ||||||||||||||||||||| ||||||||   |||||||||||||| ||||||||||| ||||||||||| || ||||||||||| || ||||    
T  204 gaacgggacgggattctgatgtattctttgatggcacaattgtcgttagaaaatcaagctgtgattgacaggttacctgtagtgaatgagttcccagaag 105  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  104 tgtttcctgatgagattcctgatgtgccaccagagagggaggttgaattttcaattgacctcgttccaggaacgaagccggtgtcgatggcac 12  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 2526 - 2706
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  |||||||||||||| |||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||    
T  2526 attcttatgttttctttgatggcatatttgtcgttagaaaatcaagttgtgattgataggttaccagtagtgaatgagtttcctgaagtttttccggatg 2625  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||||||||| |||||||||| || || ||||| || || |||| ||| |||||||||||||||||||    
T  2626 agattccagatgtaccaccagagcgggaggttgaattttcaattgaccttgttccaggaactaagccggtgtcgatggcac 2706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 213
Target Start/End: Complemental strand, 70113 - 69923
Alignment:
Q  23 acgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtt 122  Q
    |||||| || ||||| |||| |||| |||||||||  ||||||||| | || |||||| | || ||||||||||||||||||||||| ||||||||||||    
T  70113 acgagatggaattcttatgttttctttgatggcatctttgtcgttaaagaatcaagctataattgacaggttaccagtggtgaatgaatttcctgaagtt 70014  T
Q  123 tttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||| || || | ||||||  |||||||||||||||    
T  70013 tttccggatgagattcctgatgtgccaccagaaagggaagttgagttctcgattgatcttgttccgggaacgaaatcggtgtcgatggcac 69923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 16150439 - 16150233
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    |||||||||| |||||||| || || |||||| |||||||| | |||||||  |||||||||||||| ||||| || || |||||||||||||| |||||    
T  16150439 agatgaagcagctagaacgtgatggaattctggtgtattctttaatggcatatttgtcgttagaaaatcaagcggtaattgacaggttaccagttgtgaa 16150340  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
     |||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||| || || ||||| || || |||| ||||||||||||||||    
T  16150339 cgagtttcctgaagtttttcctgatgagattccagatgtgccaccatatagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcg 16150240  T
Q  207 atggcac 213  Q
    |||||||    
T  16150239 atggcac 16150233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 16154585 - 16154379
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    |||||||||| |||||||| || || |||||| |||||||| | |||||||  |||||||||||||| ||||| || || |||||||||||||| |||||    
T  16154585 agatgaagcagctagaacgtgatggaattctggtgtattctttaatggcatatttgtcgttagaaaatcaagcggtaattgacaggttaccagttgtgaa 16154486  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
     |||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||| || || ||||| || || |||| ||||||||||||||||    
T  16154485 cgagtttcctgaagtttttcctgatgagattccagatgtgccaccataaagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcg 16154386  T
Q  207 atggcac 213  Q
    |||||||    
T  16154385 atggcac 16154379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 213
Target Start/End: Original strand, 1646824 - 1647027
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  |||| ||||| || |||||||||| |||| |||||||||   |||||||||| || |||||||| || |||||||||||||||||||||||    
T  1646824 tgaagcagttagagcgagatggaattctgatgttttctttgatggcatctctgtcgttagagaatcaagctgtaattgacaggttaccagtggtgaatga 1646923  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
     ||||||||||||||||| ||||||||||| ||||| || ||||| ||||| ||||||||||| |||||||| || || | |||||||||||||||||||    
T  1646924 atttcctgaagtttttccagatgagattcctgatgtgccgccagaaagggaagttgagttctcgattgatcttgtcccgggaacgaagccggtgtcgatg 1647023  T
Q  210 gcac 213  Q
    ||||    
T  1647024 gcac 1647027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 11204802 - 11204982
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| |||||||  |||||||||||||| ||||||||||| ||||||||||| || |||||||| ||||| ||||| ||||| ||||    
T  11204802 attctgatgtattctctaatggcataattgtcgttagaaaatcaagctgtgatggacaggttacctgtagtgaatgaatttccagaagtatttcctgatg 11204901  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||| | ||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  11204902 agatttctgatgtgccaccagagagggaggttgaattttcaattgagcttgttccaggaacgaagccggtgtcgatggcac 11204982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 27903087 - 27902907
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  ||||||||||| || |||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  27903087 attcttatgttttctttgatggcatctttgtcgttagagaatcaagctgtaattgacaggttacccgtggtgaatgaatttcctgaagtttttccggatg 27902988  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||||| | ||||| ||||||||||| ||||||||  | || | |||||| ||||||||||||||||    
T  27902987 agattcctgatgtgccaccaaaaagggaagttgagttctcgattgatcttattccgggaacgaaaccggtgtcgatggcac 27902907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 20892745 - 20892553
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    ||||| ||||||||||||||||||||||||||||| |  || ||  ||||||| ||||||||||| | ||||||||| || ||||||||||| ||  |||    
T  20892745 gaacgggacgggattctgatgtattctctgatggcttatttatccgtagaaaatcaagctgtgattggcaggttacctgtagtgaatgagttcccaaaag 20892646  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||| || || |||| ||| |||||||||||||||||||    
T  20892645 tgtttcctgatgagattcctgatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacaaagccggtgtcgatggcac 20892553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 51604336 - 51604542
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||| ||||||| || || |||||||||| |||||| |||||||   ||||||||||||||||||||||||| |||| | || ||||||||||    
T  51604336 agatgaagcaattagaacgtgatggaattctgatgttttctctaatggcatatctgtcgttagaaaaccaagctgtgattgacaagctagcagtggtgaa 51604435  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||||||||| || || || || ||||||||||| ||||| || ||||| |||||||| ||||| || ||||| || || || | ||| ||||||||||||    
T  51604436 tgagtttccggaggtgttccctgatgagattcctgatgtgccgccagaaagggaggtggagttttcaattgaccttgttcccggaacaaagccggtgtcg 51604535  T
Q  207 atggcac 213  Q
    |||||||    
T  51604536 atggcac 51604542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 44659436 - 44659616
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  ||||||| || |||||||| ||||| ||||| ||||| ||||    
T  44659436 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatgggttacctgtagtgaatgaatttccggaagtgtttcctgatg 44659535  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||||||||||||| ||||| || || ||||| || || |||| ||| |||||||||||||||||||    
T  44659536 agattcctgatgtgccaccagagagggaagttgaattttcaattgaccttgttccaggaactaagccggtgtcgatggcac 44659616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 3262367 - 3262544
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  3262367 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 3262466  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  3262467 ttcctgatgtgccaccagagagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 3262544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 37 - 209
Target Start/End: Original strand, 29451111 - 29451283
Alignment:
Q  37 tgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagat 136  Q
    ||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  ||||||| || |||||||| ||||| ||||| ||||| ||||||||    
T  29451111 tgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatgggttacctgtagtgaatgaatttccggaagtgtttcctgatgagat 29451210  T
Q  137 tccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
    ||| ||||| ||||||||| |||||||||| || || |||||||| || |||| ||| |||||||||||||||    
T  29451211 tcctgatgtgccaccagagcgggaggttgaattttcaattgatcttgttccaggaacaaagccggtgtcgatg 29451283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 15356690 - 15356870
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| |||||| || |||||  ||||||| || |||||||| ||||| |||||||| ||  | ||||||||||| ||||    
T  15356690 attcttatgttttctttgatggcatacttgtcattggaaaattaagctgtaattgacaggttgccagttgtgaatgaattctcggaagtttttcctgatg 15356789  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||| ||||||||||| || || ||||| || || |||| ||||||||||||||| |||||||    
T  15356790 agattccagatgtgccaccagaaagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcaatggcac 15356870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 213
Target Start/End: Complemental strand, 15073055 - 15072881
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| ||||||||| ||||||||| || || ||||||||||| || || ||  | || |||||||| ||||| ||||||||||| ||||||||||    
T  15073055 atgttttctttgatggcattcttgtcgttggagaagcaagctgtgattgatagattgtcggttgtgaatgaatttccagaagtttttcctgatgagattc 15072956  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||| ||||||||| |||||||||||| || || |||||||| || || | |||||||||||||||||||||||    
T  15072955 ccgatataccaccagggagggaggttgaattttcgattgatcttgtccccggaacgaagccggtgtcgatggcac 15072881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 213
Target Start/End: Complemental strand, 15258635 - 15258449
Alignment:
Q  27 gacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttc 126  Q
    ||||| ||||| |||| |||| ||||||||| |||||| || ||||| ||||||||||  || ||||| | |   |||||||| || || ||||||||||    
T  15258635 gacggaattcttatgttttctttgatggcatacttgtccttggaaaatcaagctgtgaatgataggttgcaatgtgtgaatgaattcccagaagtttttc 15258536  T
Q  127 cggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||||||||||||||||| ||||| |||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  15258535 ctgatgagattccagatgtcccaccggagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 15258449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 16234344 - 16234482
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  16234344 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 16234443  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  16234444 ttgatcttgttcctggaacgaagccggtctcgatggcac 16234482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 210
Target Start/End: Complemental strand, 12479260 - 12479125
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  12479260 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 12479161  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||| || || | |||||||||||| |||||||    
T  12479160 ttgatcttgttcctggaacgaagccggtctcgatgg 12479125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 8050975 - 8051113
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  8050975 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 8051074  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  8051075 ttgatcttgttcctggaacgaagccggtctcgatggcac 8051113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 8389072 - 8388934
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  8389072 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 8388973  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  8388972 ttgatcttgttcctggaacgaagccggtctcgatggcac 8388934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 14301331 - 14301469
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  14301331 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 14301430  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  14301431 ttgatcttgttcctggaacgaagccggtctcgatggcac 14301469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 17092501 - 17092639
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || ||||| || || |    
T  17092501 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgaattttcta 17092600  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  17092601 ttgatcttgttcctggaacgaagccggtctcgatggcac 17092639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 19634796 - 19634658
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  19634796 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 19634697  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  19634696 ttgatcttgttcctggaacgaagccggtctcgatggcac 19634658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 19776145 - 19776283
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  19776145 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 19776244  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  19776245 ttgatcttgttcctggaacgaagccggtctcgatggcac 19776283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 27713996 - 27713858
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  27713996 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 27713897  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  27713896 ttgatcttgtccctggaacgaagccggtctcgatggcac 27713858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 23958407 - 23958269
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  23958407 caagcagtgattgatagggtaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 23958308  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  23958307 ttgatcttgttcctggaacgaagccggtctcgatggcac 23958269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 213
Target Start/End: Complemental strand, 40475685 - 40475562
Alignment:
Q  90 aggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccag 189  Q
    |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || || ||||| || |||||||| || || |    
T  40475685 aggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagtcgagttttctattgatcttgtccctg 40475586  T
Q  190 aaacgaagccggtgtcgatggcac 213  Q
     |||||||||||| ||||||||||    
T  40475585 gaacgaagccggtctcgatggcac 40475562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 14683191 - 14683089
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||| |||||||||| ||||| ||||| ||||| || ||||||||||| |||||||| || |||||||| || || | ||||||||||||||||||||    
T  14683191 tttcctaaagtttttccagatgaaattcctgatgtgcctccagagagggaagttgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 14683092  T
Q  211 cac 213  Q
    |||    
T  14683091 cac 14683089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 16251238 - 16251340
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| || ||||| || |||||||| || || | |||||||| |||||||||||    
T  16251238 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagggaagtcgagttttctattgatcttgttcctggaacgaagcaggtgtcgatgg 16251337  T
Q  211 cac 213  Q
    |||    
T  16251338 cac 16251340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 14993954 - 14994056
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||||| |||||| || || || ||||||||||| || ||||| || ||  ||||| | ||||| ||||||||||| ||||||||||||||||| ||    
T  14993954 tgatggcattcttgtcattggagaatcaagctgtgattgataggttgccggttatgaataaatttccagaagtttttcctgatgagattccagatgtgcc 14994053  T
Q  149 acc 151  Q
    |||    
T  14994054 acc 14994056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 16352918 - 16353020
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || |||||||| || || ||||| || | |||||| || || | ||||||||| ||||||||||    
T  16352918 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagagaagtcgagttttctaatgatcttgttcctggaacgaagccagtgtcgatgg 16353017  T
Q  211 cac 213  Q
    |||    
T  16353018 cac 16353020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 18224834 - 18224936
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| |||||  |||| || ||||||||||| |||||||| || |||||||| || || | |||||||  ||| |||||||    
T  18224834 tttcctgaagtttttccagatgaaattcctaatgtgcctccagagagggaagttgagttttctattgatcttgttcctggaacgaagttggtatcgatgg 18224933  T
Q  211 cac 213  Q
    |||    
T  18224934 cac 18224936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 15145281 - 15145383
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| |||||||| | |||||| || ||| |||| || |||||||| || |  | || |||||||||||| ||||    
T  15145281 tttcctgaagtttttccagatgaaattcctgatgtacctctagagagagaagttaagttttctattgatcttgttcttggaatgaagccggtgtctatgg 15145380  T
Q  211 cac 213  Q
    |||    
T  15145381 cac 15145383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 15001048 - 15001115
Alignment:
Q  146 accaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||||||| || || ||||| || || | || ||||||||||||||||| |||||    
T  15001048 accaccagagagggaggttgaattttcaattgaccttgttctaggaacgaagccggtgtcgaaggcac 15001115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 8708531 - 8708433
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
    ||||| ||||||||||| ||||| ||||| ||||| || ||| ||||||| ||||| || || || ||||| || ||||| ||||||||  ||||||||    
T  8708531 tttccagaagtttttcctgatgaaattcctgatgtgccgccaaagagggaagttgaattttcaatcgatcttgttccagatacgaagcctatgtcgatg 8708433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 53778 - 53598
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  |||||||||||||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  53778 attcttatgttttctttgatggcatctttgtcgttagaaaatcaagatgtgattgacaggttaccagtggtgaatgaatttcctgaagtttttcctgatg 53679  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||||||| ||||||||||| || || ||||| || || || | || ||||||||||||||||||||    
T  53678 agattccagatgtaccaccagaaagggaggttgaattttcaattgaccttgttccgggaatgaagccggtgtcgatggcac 53598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 325438 - 325259
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  ||||||||||| || ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  325438 attcttatgttttctttgatggcatatttgtcgttagagaatcaagctgtgattgacaggttaccggtggtgaatgaatttcctgaagtttttccggatg 325339  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggca 212  Q
    |||||||||||||||||||||||||||||||| |||| || ||||| || ||  | | ||||||||||| ||||||||||    
T  325338 agattccagatgtaccaccagagagggaggtttagttttcaattgaccttgttacgggaacgaagccggcgtcgatggca 325259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 211
Target Start/End: Original strand, 201059 - 201219
Alignment:
Q  51 atggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccac 150  Q
    ||||||| ||||||  |||| ||||| | |||||| || ||||| ||| | |||  ||| ||||| ||||||||||  ||||| ||||| ||||| || |    
T  201059 atggcatacttgtctgtagagaaccaggttgtgattgataggttgccaattgtgtgtgaatttccagaagtttttcatgatgaaattcctgatgtgccgc 201158  T
Q  151 cagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
    |||||||||| |||||||| || || ||||| || || |  || ||||| |||||||||||    
T  201159 cagagagggaagttgagttttcaatcgatcttgttccgggtacaaagcctgtgtcgatggc 201219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 9008 - 9214
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || ||  |||||||||||||| | |||||||  ||||||||||| || ||||||||||| |||||||||| |||||||||    
T  9008 agatgaaacaactagaacgtgatggatttctgatgtattctttaatggcatatttgtcgttagagaatcaagctgtgattgacaggttactagtggtgaa 9107  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||||||||| || |||||||||||||| ||||| ||||| |||||||| || || |||||  | || |||| ||||||||||||||||    
T  9108 tgaatttcctgaagtttttcctgacgagattccagatgtgccaccggagagagaggttgaattttcaattgacgttgttccaggaacgaagccggtgtcg 9207  T
Q  207 atggcac 213  Q
    |||||||    
T  9208 atggcac 9214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 19222 - 19428
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || ||  |||||||||||||| | |||||||  ||||||||||| || ||||||||||| |||||||||| |||||||||    
T  19222 agatgaaacaactagaacgtgatggatttctgatgtattctttaatggcatatttgtcgttagagaatcaagctgtgattgacaggttactagtggtgaa 19321  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||||||||| || |||||||||||||| ||||| ||||| |||||||| || || |||||  | || |||| ||||||||||||||||    
T  19322 tgaatttcctgaagtttttcctgacgagattccagatgtgccaccggagagagaggttgaattttcaattgacgttgttccaggaacgaagccggtgtcg 19421  T
Q  207 atggcac 213  Q
    |||||||    
T  19422 atggcac 19428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 99; Significance: 6e-49; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 49727 - 49929
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    |||||||| | |||||||| || || ||| ||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||    
T  49727 agatgaagtagctagaacgtgatggaattttgatgtattctttgatggcatgtttgtcgttagagaatcaagctgtgatagacaggttaccagtggtgaa 49826  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||| |||| |||||||||||| |||||||||||||| | ||| ||||| || || ||||| || || |||| |||||||| |||||||    
T  49827 tgaatttcctgaagtctttctggatgagattcctgatgtaccaccagaaaaggaagttgaattttcaattgaccttgttccaggaacgaagctggtgtcg 49926  T
Q  207 atg 209  Q
    |||    
T  49927 atg 49929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 58761 - 58963
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    |||||||| | |||||||| || || ||| ||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||    
T  58761 agatgaagtagctagaacgtgatggaattttgatgtattctttgatggcatgtttgtcgttagagaatcaagctgtgatagacaggttaccagtggtgaa 58860  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||| |||| |||||||||||| |||||||||||||| | ||| ||||| || || ||||| || || |||| |||||||| |||||||    
T  58861 tgaatttcctgaagtctttctggatgagattcctgatgtaccaccagaaaaggaagttgaattttcaattgaccttgttccaggaacgaagctggtgtcg 58960  T
Q  207 atg 209  Q
    |||    
T  58961 atg 58963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 65149 - 65351
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    |||||||| | |||||||| || || ||| ||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||    
T  65149 agatgaagtagctagaacgtgatggaattttgatgtattctttgatggcatgtttgtcgttagagaatcaagctgtgatagacaggttaccagtggtgaa 65248  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||||||||| |||| |||||||||||| |||||||||||||| | ||| ||||| || || ||||| || || |||| |||||||| |||||||    
T  65249 tgaatttcctgaagtctttctggatgagattcctgatgtaccaccagaaaaggaagttgaattttcaattgaccttgttccaggaacgaagctggtgtcg 65348  T
Q  207 atg 209  Q
    |||    
T  65349 atg 65351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 29355 - 29175
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    |||||||||| |||| ||||||||| |||||| || ||||| ||||||||||| |||| ||| ||||| |||||||| ||||| ||||||||||| ||||    
T  29355 attctgatgttttctttgatggcatacttgtcattggaaaatcaagctgtgattgacaagttgccagttgtgaatgaatttccagaagtttttcctgatg 29256  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||| || |||||||| || || ||||| || || | || ||||||||| |||||||||||||    
T  29255 agattccagatgtgccaccagaaagagaggttgaattttcaattgaccttgttctaggaacgaagccagtgtcgatggcac 29175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 251379 - 251173
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||||| ||||||||||||||||||||| | |||||||  |||||||||||||| |||| |||||| |||||||| || ||||||||    
T  251379 agatgaaacagctagaacgtgacgggattctgatgtattctttaatggcatatttgtcgttagaaaatcaagttgtgattgacaggttgcctgtggtgaa 251280  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||||||||| || || ||||| ||  | |||| ||| ||||||||||||    
T  251279 tgaatttccagaagtgtttcctgatgagattcctgatgtgccaccagagagggaggttgaattttcaattgaccttattccaggaacaaagccggtgtcg 251180  T
Q  207 atggcac 213  Q
    |||||||    
T  251179 atggcac 251173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 10372 - 10525
Alignment:
Q  60 ttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagaggg 159  Q
    ||||||||||| || ||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  10372 ttgtcgttagagaatcaagctgtgattgacagtttaccaatggtgaatgagtttcctgaagtttttccggacgagattccagatgtaccaccagaaaggg 10471  T
Q  160 aggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  10472 aggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 10525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 33 - 209
Target Start/End: Complemental strand, 314 - 138
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  |||||||||||||| |||||||| || |||||||| ||| | ||||||||||||||||||||||||||||| |    
T  314 attcttatgttttctttgatggcatatttgtcgttagaaaatcaagctgtaattgacaggttgccaattgtgaatgagtttcctgaagtttttccggacg 215  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
    |||||||||||||||||||||| ||||||||||| || || ||||| || || |||| |||||||||||||||||||    
T  214 agattccagatgtaccaccagaaagggaggttgaattttcaattgaacttgttccaggaacgaagccggtgtcgatg 138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 45000 - 45180
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| | |||||||  ||||||||||| || |||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  45000 attcttatgttttctttaatggcatatttgtcgttagagaatcaagttgtgattgacaggttgccagttgtgaatgagtttcctgaagtttttccggatg 45099  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||| ||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  45100 agattccagatgtgccaccagaaagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 45180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 39909 - 40086
Alignment:
Q  36 ctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgaga 135  Q
    |||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  | ||||| || |||||||| ||||| ||||| || || |||||||    
T  39909 ctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatggtttacctgtagtgaatgaatttccagaagtattccctgatgaga 40008  T
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||| |||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  40009 ttcctgatgtgccaccagagagggaggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 40086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 33 - 209
Target Start/End: Complemental strand, 23279109 - 23278933
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    |||||||||  |||| |||||||||  ||||||||||| || ||||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||    
T  23279109 attctgatgctttctttgatggcatatttgtcgttagagaatcaagctgtgattgacaggttgccagttgtgaatgagtttcctgaagtttttcctgatg 23279010  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
    ||||||||||||| |||||||||||||||||||| || || ||||| || || |||| ||||||||| |||||||||    
T  23279009 agattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccagtgtcgatg 23278933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 19717109 - 19717307
Alignment:
Q  15 caactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttc 114  Q
    ||||||||||  || || ||||||||||||||| | |||||||  |||||||||||||| ||||||||||| |||| ||||||| |||||||||| ||||    
T  19717109 caactagaacatgatggaattctgatgtattctttaatggcatatttgtcgttagaaaatcaagctgtgattgacaagttaccaatggtgaatgaatttc 19717208  T
Q  115 ctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||||| |||||  |||||||||| ||||| |||| |||||||||||| || || || ||||| || || |||| ||||||| |||||||||||||||    
T  19717209 cagaagtgtttcctaatgagattcctgatgtgccactagagagggaggtcgaattttcaattgaccttgttccaggaacgaagtcggtgtcgatggcac 19717307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 27790099 - 27789893
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || |||||||||| |||||| |||||||   ||||||||||||||||||||||||| |||| | || ||||||||||    
T  27790099 agatgaagcagttagaacgtgatggaattctgatgttttctctaatggcatatctgtcgttagaaaaccaagctgtgattgacaagctagcagtggtgaa 27790000  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||||||||| || || || || ||||||||||| ||||| || ||||| |||||||| ||||| || ||||| || || || | ||| ||||||||||||    
T  27789999 tgagtttccggaggtgttccctgatgagattcctgatgtgccgccagaaagggaggtggagttttcaattgaccttgttcccggaacaaagccggtgtcg 27789900  T
Q  207 atggcac 213  Q
    |||||||    
T  27789899 atggcac 27789893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 25256235 - 25256071
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||||| ||||||||| || || ||||||||||| || ||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||||| ||    
T  25256235 tgatggcatacttgtcgttggagaatcaagctgtgattgataggttgccagttgtgaatgaatttccagaagtttttcctgatgagattccagatgtgcc 25256136  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||| ||  | ||||||||  | |  | |||||||||||||||||||||||    
T  25256135 accagagagggaggttgaatttgcaattgatcttattctcggaacgaagccggtgtcgatggcac 25256071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 12576712 - 12576506
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || |||||||||| |||||| |||||||   ||||||||||||||||||||||||| |||| | || ||||||||||    
T  12576712 agatgaagcagttagaacgtgatggaattctgatgttttctctaatggcatatctgtcgttagaaaaccaagctgtgattgacaagctagcagtggtgaa 12576613  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||||||||| || || || || ||||||||||| ||||| || ||||| |||||||| ||||| || ||||| ||  | || | ||| ||||||||||||    
T  12576612 tgagtttccggaggtgttccctgatgagattcctgatgtgccgccagaaagggaggtggagttttcaattgaccttattcctggaacaaagccggtgtcg 12576513  T
Q  207 atggcac 213  Q
    |||||||    
T  12576512 atggcac 12576506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 23098102 - 23098308
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || ||||||||||||||| |||||||||  |||||||| || || || |||||||| ||||| ||||| || |||||    
T  23098102 agatgaagcagttagaacgtgatggaattctgatgtattctttgatggcatctttgtcgttggagaatcaggctgtgattgacagattaccggtagtgaa 23098201  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| || ||||| || ||||| |||||||| || ||||| ||||| ||||||||||| ||||| || ||||| || || |||  ||||||||||||||||    
T  23098202 tgaattccctgaggtgtttcctgatgagatccctgatgtgccaccggagagggaggtggagttttcaattgaccttgttccaagaacgaagccggtgtcg 23098301  T
Q  207 atggcac 213  Q
    |||||||    
T  23098302 atggcac 23098308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 9337873 - 9337735
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  9337873 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 9337774  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  9337773 ttgatcttgttcctggaacgaagccggtctcgatggcac 9337735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 9486507 - 9486369
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  9486507 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 9486408  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  9486407 ttgatcttgttcctggaacgaagccggtctcgatggcac 9486369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 16983531 - 16983393
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||| ||||| || |||||||| || ||||| || || |    
T  16983531 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccggatgagattcctgatgtgcctccagagagagaagttgaattttcta 16983432  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  16983431 ttgatcttgttcctggaacgaagccggtctcgatggcac 16983393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 1066057 - 1065904
Alignment:
Q  60 ttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagaggg 159  Q
    |||||| | ||||| ||||||||||| ||  ||||||| || |||||||| ||||| ||||| ||||| || |||||||| ||||| |||||||||||||    
T  1066057 ttgtcggtggaaaatcaagctgtgattgatgggttacccgtagtgaatgaatttccggaagtgtttcctgaagagattcctgatgtgccaccagagaggg 1065958  T
Q  160 aggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || |||||| | || |||| ||| |||||||||||||||||||    
T  1065957 aggttgaattttcaattgatgttgttccaggaactaagccggtgtcgatggcac 1065904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 31832964 - 31832811
Alignment:
Q  60 ttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagaggg 159  Q
    |||||| | ||||| ||||||||||| ||  | ||||| || |||||||| ||||| |||||||| || ||||||||||| ||||| ||||| |||||||    
T  31832964 ttgtcggtggaaaatcaagctgtgattgatggtttaccggtagtgaatgaatttccagaagttttccctgatgagattcctgatgtgccaccggagaggg 31832865  T
Q  160 aggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || |||||||| || |||| ||| |||||||||||||||||||    
T  31832864 aggttgaattttcaattgatcttgttccaggaactaagccggtgtcgatggcac 31832811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 17001291 - 17001153
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || ||||| || || |    
T  17001291 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgaattttcta 17001192  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  17001191 ttgatcttgttcctggaacgaagccggtctcgatggcac 17001153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 24264661 - 24264523
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  24264661 caagcagtgattgataggttaccggtggtgtgtgattttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 24264562  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  24264561 ttgatcttgttcctggaacgaagccggtctcgatggcac 24264523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 27220307 - 27220169
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| ||||||| ||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  27220307 caagcagtgattgacaggtcaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 27220208  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  27220207 ttgatcttgttcctggaacgaagccggtctcgatggcac 27220169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 44383722 - 44383860
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  44383722 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 44383821  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  44383822 ttgatcttgttcctggaacgaagccggtctcgatggcac 44383860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 24874925 - 24875040
Alignment:
Q  98 agtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
    |||||||  ||| ||||||||||||||||| ||||||||||  ||||| || |||||||| || |||||||| || ||||||||||| || | |||||||    
T  24874925 agtggtgtgtgaatttcctgaagtttttccagatgagattcttgatgtgcctccagagagagaagttgagttttctattgatctagtccctggaacgaag 24875024  T
Q  198 ccggtgtcgatggcac 213  Q
    ||||||||||||||||    
T  24875025 ccggtgtcgatggcac 24875040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 24712325 - 24712187
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  24712325 caagcagtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 24712226  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  24712225 ttgatcttgttcctggaacgaagccggtttcgatggcac 24712187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 27373560 - 27373422
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| |||| |||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |    
T  27373560 caagcagtgattgataggttaccggtggtgtgtgaatttcttgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttcta 27373461  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  27373460 ttgatcttgttcctggaacgaagccggtctcgatggcac 27373422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 41606537 - 41606675
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || || ||||| || |||||||| || |    
T  41606537 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctcctgagagagaagttgagttttcta 41606636  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  41606637 ttgatcttgtccctggaacgaagccggtctcgatggcac 41606675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 10871122 - 10871003
Alignment:
Q  94 taccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaac 193  Q
    |||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || | |||    
T  10871122 taccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaac 10871023  T
Q  194 gaagccggtgtcgatggcac 213  Q
    ||||||||| ||||||||||    
T  10871022 gaagccggtctcgatggcac 10871003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 24657846 - 24657948
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||| || |||||||| || |  | ||||||||||||||||||||    
T  24657846 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagggaagttgagttttctattgatcttgttcgtggaacgaagccggtgtcgatgg 24657945  T
Q  211 cac 213  Q
    |||    
T  24657946 cac 24657948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 21143216 - 21143331
Alignment:
Q  98 agtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
    |||||||  ||| |||||| ||||||| || ||||| ||||| ||||| || |||||||| || |||||||| || ||||||||||| || | |||||||    
T  21143216 agtggtgtgtgattttcctaaagttttcccagatgaaattcctgatgtgcctccagagagagaagttgagttttctattgatctagttcctggaacgaag 21143315  T
Q  198 ccggtgtcgatggcac 213  Q
    ||||||||||||||||    
T  21143316 ccggtgtcgatggcac 21143331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 21323454 - 21323556
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| |||||  |||| || |||||||| || || ||||| || |||||||| || || | ||||||||||||||||||||    
T  21323454 tttcctgaagtttttccagatgaaattccttatgtgcctccagagagagaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 21323553  T
Q  211 cac 213  Q
    |||    
T  21323554 cac 21323556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 22323494 - 22323576
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagag 157  Q
    ||||| ||||| ||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| ||||| || ||||||||    
T  22323494 caagcagtgattgacaggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagag 22323576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 23113054 - 23112894
Alignment:
Q  51 atggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccac 150  Q
    ||||||| ||||||||| || || ||||||||||| || || || |||||  | ||||| ||||| ||||| ||||| ||||||||||| ||||| || |    
T  23113054 atggcatacttgtcgttggagaatcaagctgtgattgatagattgccagttctcaatgaatttccagaagtctttcctgatgagattcctgatgtgcctc 23112955  T
Q  151 cagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
     ||||||||| ||||| ||  | |||||||| || || |  |||||||| |||||||||||    
T  23112954 tagagagggaagttgaatttacaattgatcttgttccgggtacgaagcctgtgtcgatggc 23112894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 23204569 - 23204467
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||||||||||||  |||| ||||| ||||| || ||||| ||||| || ||||| || |||||||| || || |  || ||||||||||||||||    
T  23204569 tttcctgaagtttttccaaatgaaattcctgatgtgcctccagaaagggaagtcgagttttctattgatcttgttcctgggacaaagccggtgtcgatgg 23204470  T
Q  211 cac 213  Q
    |||    
T  23204469 cac 23204467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 24705670 - 24705772
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||| |||||||||| ||||| ||||| ||||| || || ||||| || || ||||| || |||||||| || ||   ||||||||||||||||||||    
T  24705670 tttcctaaagtttttccagatgaaattcctgatgtgcctccggagagagaagtcgagttttctattgatcttgttcctagaacgaagccggtgtcgatgg 24705769  T
Q  211 cac 213  Q
    |||    
T  24705770 cac 24705772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 16927597 - 16927513
Alignment:
Q  129 gatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||| ||||| || |||||||| || ||||| || || |||||||| || || | |||||||||||| ||||||||||    
T  16927597 gatgagattcctgatgtgcctccagagagagaagttgaattttctattgatcttgttcctggaacgaagccggtctcgatggcac 16927513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 16924215 - 16924132
Alignment:
Q  128 ggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
    |||||||||||| ||||| || |||||||| || ||||| || || |||||||| || || | |||||||||||| ||||||||    
T  16924215 ggatgagattcctgatgtgcctccagagagagaagttgaattttctattgatcttgttcctggaacgaagccggtctcgatggc 16924132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 23105916 - 23106010
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||||| ||||||||||| ||||| ||||| ||||| || ||||||||  | |||||||| || |||||||| || || | ||||||||| |||||    
T  23105916 tttccggaagtttttcctgatgaaattcctgatgtgcctccagagagaaaagttgagttttctattgatcttgttcctggaacgaagcctgtgtc 23106010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 24677742 - 24677672
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatct 181  Q
    ||||||||||||||||| ||||| ||||| || || || |||||||| || |||||||| || ||||||||    
T  24677742 tttcctgaagtttttccagatgaaattcctgacgtgcctccagagagagaagttgagttttctattgatct 24677672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 31223 - 31430
Alignment:
Q  6 gagatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtga 105  Q
    ||||||||||| |||||| |||| |||||||||||||||||| | |||||||  |||||||||||||||||||||||| | || |||||||| || ||||    
T  31223 gagatgaagcagctagaaagagatgggattctgatgtattctttaatggcatatttgtcgttagaaaaccaagctgtggttgataggttacctgtagtga 31322  T
Q  106 atgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    |||| || ||||| || ||||| ||||||||||| ||||| ||||||||||| |||||||| || || ||||| || || |||| ||| |||||||||||    
T  31323 atgaattccctgatgtgtttcctgatgagattcctgatgtgccaccagagagagaggttgaattttcaattgaccttgttccaggaactaagccggtgtc 31422  T
Q  206 gatggcac 213  Q
    ||||||||    
T  31423 gatggcac 31430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 53970 - 54095
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || |||||||||||||||   |||||||  |||||||||||||| ||||||||||| ||||||||  ||||||||||    
T  53970 agatgaaacaactagaacgtgatggaattctgatgtattcttaaatggcatatttgtcgttagaaaatcaagctgtgattgacaggttgtcagtggtgaa 54069  T
Q  107 tgagtttcctgaagtttttccggatg 132  Q
    ||| ||||| ||||| ||||| ||||    
T  54070 tgaatttccagaagtgtttcctgatg 54095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 381 - 587
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||||| ||||||||||||||||||||| | |||||||  |||||||||||||| ||||| ||||| |||||||| || ||||||||    
T  381 agatgaaacagctagaacgggacgggattctgatgtattctttaatggcatatttgtcgttagaaaatcaagccgtgattgacaggttgcctgtggtgaa 480  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||||||||| || || || || || || |||| ||| ||||||||||||    
T  481 tgaatttccagaagtgtttcctgatgagattcctgatgtgccaccagagagggaggttgaattttcaatagaccttgttccaggaacaaagccggtgtcg 580  T
Q  207 atggcac 213  Q
    || ||||    
T  581 atagcac 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 428 - 608
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    |||||||||| |||  ||||||||| |||||| || ||||| |||||||||||  ||||||| ||||| ||||||||||||||||| |||||||| ||||    
T  428 attctgatgttttccttgatggcatacttgtctttggaaaatcaagctgtgattaacaggttgccagttgtgaatgagtttcctgaggtttttcctgatg 527  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||||||||||||||| || || ||||| || || |||| ||||||||||||||| |||||||    
T  528 agattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcaatggcac 608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 14939 - 14759
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| |||||||||  ||||||||||| || ||||||||||| || | ||| ||||| ||||||||||||||||| |||||||| ||||    
T  14939 attcttatgttttctttgatggcatatttgtcgttagagaatcaagctgtgattgatatgttgccagttgtgaatgagtttcctgaggtttttcctgatg 14840  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  14839 agattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 14759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 10333 - 10539
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||||||  ||||||| || || ||| ||||||||||  ||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  10333 agatgaagcagttagaacgtgatggaattttgatgtattccttgatggcatccttgtcgttggaaaatcaagctgtgattgacaggttaccagtggtgaa 10432  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||||||||| || || ||||| ||||||||||| ||||| || | |||||||||||| ||||| || ||||| || || || | ||| ||||||||||||    
T  10433 tgagtttccggaggtgtttcctgatgagattcctgatgtgcccctagagagggaggtggagttttcgattgaccttgttccgggaacaaagccggtgtcg 10532  T
Q  207 atggcac 213  Q
    |||||||    
T  10533 atggcac 10539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 1058 - 1238
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| |||||| || ||||| ||||  ||||| |||||||| ||||| |||||||| ||||| ||||||||||| ||||    
T  1058 attctaatgtcttctttgatggcatacttgtcattggaaaatcaagtggtgattgacaggttgccagttgtgaatgaatttccagaagtttttcctgatg 1157  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  1158 agattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 1238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 29677 - 29485
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    ||||| ||||||||||||||||||||| |||||| |   ||||| |||||||| ||||||||||| ||||||||||  || |||||||| ||||| ||||    
T  29677 gaacgggacgggattctgatgtattctttgatggtacaattgtcattagaaaatcaagctgtgattgacaggttacttgtagtgaatgaatttccagaag 29578  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||||| ||||||||||| ||||| ||||||||||||||| |||| || || |||||||| ||  ||| |||||||||||||||||||||||    
T  29577 tgtttcctgatgagattcctgatgtgccaccagagagggagattgaattttcaattgatcttgttacaggaacgaagccggtgtcgatggcac 29485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 39 - 214
Target Start/End: Original strand, 19213 - 19388
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| |||| ||||  ||||||||||| || ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||||||||||    
T  19213 atgttttctttgatagcatatttgtcgttagagaatcaagctgtgattgacaggttgccagttgtgaatgagtttcctgaggtttttcctgatgagattc 19312  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcaca 214  Q
    ||||||| |||||||||||||||||||| || || ||||| || || |||| ||||||||||||||  ||||||||    
T  19313 cagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtaaatggcaca 19388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 39 - 213
Target Start/End: Complemental strand, 36664 - 36490
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| |||||||||  ||||||||||| || ||||||||||| |  ||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  36664 atgttttctttgatggcatatttgtcgttagagaatcaagctgtgattgctaggttgccagttgtgaatgagtttcctgaagtttttcctgatgagattc 36565  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| |||||||||||||||||||| || || ||||| || || | || ||||||||| |||||||||||||    
T  36564 cagatgtgccaccagagagggaggttgaattttcaattgaccttgttctaggaacgaagcctgtgtcgatggcac 36490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 12929 - 13118
Alignment:
Q  24 cgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagttt 123  Q
    ||||| || ||||| |||| |||  ||||||||| |||||| || |||||  |||||||||| |||||||| ||||| |||||||| ||||| |||||||    
T  12929 cgagatggaattctaatgttttccttgatggcatacttgtcattggaaaattaagctgtgattgacaggttgccagttgtgaatgaatttccagaagttt 13028  T
Q  124 ttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||  |||||||||||||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  13029 ttcctaatgagattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 21109 - 21298
Alignment:
Q  24 cgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagttt 123  Q
    ||||| || ||||| |||| |||  ||||||||| |||||| || |||||  |||||||||| |||||||| ||||| |||||||| ||||| |||||||    
T  21109 cgagatggaattctaatgttttccttgatggcatacttgtcattggaaaattaagctgtgattgacaggttgccagttgtgaatgaatttccagaagttt 21208  T
Q  124 ttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||  |||||||||||||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  21209 ttcctaatgagattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 21298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 9794 - 9614
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| | |||||||  ||||||||||| || ||||||||||| ||||||||| ||||||||||||||||| ||||||||||| | || |    
T  9794 attcttatgttttctttaatggcatatttgtcgttagagaatcaagctgtgattgacaggttagcagtggtgaatgagtttgctgaagttttttccgacg 9695  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||||||| ||||||||||| || || ||||| || || |||| ||||||||||||||  |||||||    
T  9694 agattccagatgtaccaccagaaagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtttatggcac 9614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 1034 - 1242
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || ||||| ||||||||| | ||||| |  |||||||||||||| |||||| | || |||||||| |||||||||||    
T  1034 agatgaaacaactagaacgtgatggaattctcatgtattctttaatggcgtatttgtcgttagaaaatcaagctataattgacaggttgccagtggtgaa 1133  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccac--cagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgt 204  Q
    ||| ||||| ||||| ||||| ||||||||| ||||||| ||||   |||||| |||||||||||||| ||||| || || || | ||||||||||||||    
T  1134 tgaatttccagaagtgtttcctgatgagatttcagatgtgccacaagagagagagaggttgagttctcaattgaccttgttccgggaacgaagccggtgt 1233  T
Q  205 cgatggcac 213  Q
    |||||||||    
T  1234 cgatggcac 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 5692 - 5898
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || ||| |||| || || ||||||||||||||| | |||||||  |||||||||||||| |||| |||||  |||||||| || ||||||||    
T  5692 agatgaaacagctaaaacgtgatggaattctgatgtattctttaatggcatatttgtcgttagaaaatcaagttgtgaatgacaggttgcctgtggtgaa 5791  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||| ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||| || || ||||| ||  | |||| ||||||||||||||||    
T  5792 tgaatttccagaagtgtttcctgatgagattcctgatgtgccaccagaaagggaggttgaattttcaattgaccttattccaggaacgaagccggtgtcg 5891  T
Q  207 atggcac 213  Q
    |||||||    
T  5892 atggcac 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 14880 - 14674
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || ||||| |||||||||   |||||||  |||||||||||||| |||| |||||| |||||||| ||| |||||||    
T  14880 agatgaaacaactagaacgtgatggaattcttatgtattcttaaatggcatatttgtcgttagaaaatcaagttgtgattgacaggttgccaatggtgaa 14781  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||  ||||| ||||| ||||||||||| ||||| |||| ||||||||||||||| || || ||||| || || |||| |||||||| |||||||    
T  14780 tgaatttctagaagtgtttcctgatgagattcctgatgtgccactagagagggaggttgaattttcaattgaccttgttccaggaacgaagctggtgtcg 14681  T
Q  207 atggcac 213  Q
    |||||||    
T  14680 atggcac 14674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 943 - 779
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    |||||||||  ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||| |||||||||| |||||| ||    
T  943 tgatggcatatttgtcgttagagaatcaagctgtgattgacaggttaccagttgtgaatgaatttccagaagtgtttcctgatgagattctagatgtgcc 844  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||| |||| |||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  843 accagaaagggtggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 25855 - 25663
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    |||||||| || ||||| |||| |||| |||||||||  ||||||||||| || |||||||| || ||| || |||||||||||||||| || |||||||    
T  25855 gaacgagatggaattcttatgttttctttgatggcatctttgtcgttagagaatcaagctgtaattgacgggctaccagtggtgaatgaattccctgaag 25756  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||||| ||||| | |||  | ||||| ||||||||||| |||||||| || || | |||||| ||||||||||||||||    
T  25755 tttttccggatgagattcctgatgtgctaccgaaaagggaagttgagttctcgattgatcttgttccgggaacgaaaccggtgtcgatggcac 25663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 213
Target Start/End: Original strand, 64092 - 64272
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| |||||| || || || ||||||||||| ||||| || || || |||||||| ||||| ||||||||||| |||     
T  64092 attctaatgttttctttgatggcatacttgtcattggagaatcaagctgtgattgacagattgccggttgtgaatgaatttccagaagtttttcctgatc 64191  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||||||||||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  64192 agattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 64272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 514914 - 515106
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    ||||| |||| |||||||||||||||| ||||||||   |||||||||||||| ||||||||||| ||| ||||||| || ||||||||||| || ||||    
T  514914 gaacgggacgagattctgatgtattctttgatggcacaattgtcgttagaaaatcaagctgtgattgactggttacctgtagtgaatgagttcccagaag 515013  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||||  ||||||||||| ||||| ||||||||||| |||||||| || || ||||| ||  | |||| ||| |||||||||||||||||||    
T  515014 tgtttcatgatgagattcctgatgtgccaccagagagagaggttgaattttcaattgacctcattccaggaacaaagccggtgtcgatggcac 515106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 44 - 213
Target Start/End: Original strand, 452797 - 452966
Alignment:
Q  44 ttctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagat 143  Q
    |||| |||||||||  |||||||| || || ||||||||||| || || || || || |||||||| ||| | ||||||||||| |||||||||||||||    
T  452797 ttctttgatggcatatttgtcgttggagaatcaagctgtgattgatagtttgccggttgtgaatgaattttcggaagtttttcctgatgagattccagat 452896  T
Q  144 gtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    || |||||||||||||| ||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  452897 gtgccaccagagagggaagttgaattatcaattgaccttgttccaggaacgaagccggtgtcgatggcac 452966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 213
Target Start/End: Complemental strand, 12550 - 12347
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  ||||| | ||||| ||| | |||| |||| ||||||||| ||||||||| || || |||| |||||| || || || || |||||||||||    
T  12550 tgaagcagttagaatgtgacggaattttaatgttttctttgatggcatacttgtcgttggagaatcaagatgtgattgatagattgccggtggtgaatga 12451  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
     ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| || || || ||||| || || | |||||||||||||||||||    
T  12450 atttccagaagtttttcctgatgagattccagatgtgccaccagagagggaggttgaattttcaatcgatcttgtgcccggaacgaagccggtgtcgatg 12351  T
Q  210 gcac 213  Q
    ||||    
T  12350 gcac 12347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 6769 - 6655
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||| | || ||||  |||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  6769 attctgatgtattctttaatcgcatatttgtcgttagaaaatcaagcggtgattgacaggttaccagtggtgaatgaatttcctgaagtttttccggatg 6670  T
Q  133 agattccagatgtac 147  Q
    |||||||||||||||    
T  6669 agattccagatgtac 6655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 21879 - 21673
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| |||||||| || || || ||||| ||||||||| | |||||||| |||||||||||||| |||||| |||| |||| ||| |  ||||||||    
T  21879 agatgaaacaactagatcgtgatggaattcttatgtattctttaatggcatgtttgtcgttagaaaatcaagctttgattgacaagttgctggtggtgaa 21780  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| ||||| ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||| || || ||||| || || |||| ||| |||||||||| |    
T  21779 tgaatttccagaagtgtttcctgatgagattcctgatgtgccaccagatagggaggttgaattttcaattgaccttgttccaggaacaaagccggtgttg 21680  T
Q  207 atggcac 213  Q
    |||||||    
T  21679 atggcac 21673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 39 - 213
Target Start/End: Complemental strand, 5476 - 5302
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| |||||||||  ||||||||||| || ||||||||||| || | ||| ||||| ||||||||||||||||| |||||||| ||||||||||    
T  5476 atgttttctttgatggcatatttgtcgttagagaatcaagctgtgattgatatgttgccagttgtgaatgagtttcctgaggtttttcctgatgagattc 5377  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||  ||||| |||||||| || || ||||| || || |||| |||||||||||||||||||||||    
T  5376 cagatgtgccacttgagagtgaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatggcac 5302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 11540 - 11360
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||||||| ||  ||||||| || |||||||| ||||| ||||| ||||| ||||    
T  11540 attctgatgtattctctaatggcacaattgtcgttagaaaatcaagctgtgattgatgggttacctgtagtgaatgaatttccggaagtgtttcctgatg 11441  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| ||||| |||| ||||||||||||||| || || ||||| || || || | ||| |||||||||||||||||||    
T  11440 agattcctgatgtgccactagagagggaggttgaattttcaattgaccttgttccgggaactaagccggtgtcgatggcac 11360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 213
Target Start/End: Complemental strand, 11714 - 11511
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  ||||||| || |||||| | |||| |||| ||||||||| |||||| || || || ||||||||||| || || ||||| || |||| |||    
T  11714 tgaagcagttagaacgtgatgggattttaatgttttctttgatggcatacttgtcattggagaatcaagctgtgattgatagattaccggttgtgagtga 11615  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
     ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| || || || || || || || | |||||||||||||||||||    
T  11614 atttccagaagtttttcctgatgagattccagatgtgccaccagagagggaggttgaattttcaatcgaccttgttcccggaacgaagccggtgtcgatg 11515  T
Q  210 gcac 213  Q
    ||||    
T  11514 gcac 11511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 30866 - 31072
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| || |||||||| || || ||| |||||| |||||||||||| |  || ||  ||||||||||||||||||| |||||||| |||||||||||    
T  30866 agatgaaacagctagaacgtgatggaattttgatgttttctctgatggcttatttatccgtagaaaaccaagctgtgattgacaggttgccagtggtgaa 30965  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
     || ||| | ||||| ||||| ||||||||||| ||||| |||||||||||||| ||||| || || ||||| || || | || ||| ||||||||||||    
T  30966 agaattttcagaagtgtttcctgatgagattcctgatgtgccaccagagagggaagttgaattttcaattgaccttgttctaggaacaaagccggtgtcg 31065  T
Q  207 atggcac 213  Q
    |||||||    
T  31066 atggcac 31072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 110341 - 110208
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| |||||| || ||||| ||||||||||| |||||||| |||||  ||||||| ||||| ||||||||||| ||||    
T  110341 attctaatgttttctttgatggcatacttgtcattggaaaatcaagctgtgattgacaggttgccagtcatgaatgaatttccagaagtttttcccgatg 110242  T
Q  133 agattccagatgtaccaccagagagggaggttga 166  Q
    ||||||||||||| ||||||||||||||||||||    
T  110241 agattccagatgtgccaccagagagggaggttga 110208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 52576 - 52678
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||| | ||||| || |||||||| || |||||||| || |||||||| || || | ||||||||| ||||| ||||    
T  52576 tttcctgaagtttttccagatgaaattactgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaacgaagcctgtgtctatgg 52675  T
Q  211 cac 213  Q
    |||    
T  52676 cac 52678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 4912 - 4732
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| |||||| || || || ||||||||||| ||||| || || || |||||||| |||||  |||||||||| ||||    
T  4912 attctaatgttttctttgatggcatacttgtcattggagaatcaagctgtgattgacagattgccggttgtgaatgaatttccataagtttttcctgatg 4813  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||| |||||| |||||||||||||||||||| || || || ||||| || || | |||||||||||||||||||||||    
T  4812 agattctagatgtgccaccagagagggaggttgaattttcaatcgatcttgtgcccggaacgaagccggtgtcgatggcac 4732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 49850 - 49656
Alignment:
Q  19 tagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctga 118  Q
    ||||||| || || ||||| |||| |||| ||||||||| | |||| || || || ||||||||||| ||||| || || || |||||||| ||||| ||    
T  49850 tagaacgtgatggaattctaatgttttctttgatggcatacctgtcattggagaatcaagctgtgattgacagattgccggttgtgaatgaatttccaga 49751  T
Q  119 agtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||||| || || ||||| || || |||| |||||||||| | ||||||||||    
T  49750 agtttttcctgatgagattccagatgtgccaccagaaagggaggttgaattttcaattgaccttgttccaggaacgaagccgatatcgatggcac 49656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 24947 - 24767
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||||||||||||| |   ||||| ||||||||||||||| ||||||||||| || |||||  ||||||||||||| ||||| ||||| ||||  ||||    
T  24947 attctgatgtattctttacaggcatacttgtcgttagaaaatcaagctgtgattgataggttgtcagtggtgaatgaatttccagaagtgtttcttgatg 24848  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| |||||  ||||||| ||||||||||| || || ||||| || || |||| ||| |||||| ||||||||||||    
T  24847 agattcctgatgttgcaccagaaagggaggttgaattttcaattgaccttgttccaggaacaaagccgatgtcgatggcac 24767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 214
Target Start/End: Original strand, 43969 - 44171
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  ||||||| || || ||||| |||| |||| |||||| || || ||| ||||| || ||||||||||| || || || || || |||| |||    
T  43969 tgaagcagttagaacgtgatggaattctaatgttttctttgatggaatactagtcattagagaatcaagctgtgattgatagattgccggttgtgagtga 44068  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
     || | | || ||||||| ||| |||||||||||||||||||||||||||||||||| || | || | |||| || || | |||||||||||||||||||    
T  44069 attccat-aattttttcctgataagattccagatgtaccaccagagagggaggttgaatt-ttcaatcatcttgtgcccgtaacgaagccggtgtcgatg 44166  T
Q  210 gcaca 214  Q
    |||||    
T  44167 gcaca 44171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 42413 - 42249
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    |||||||||  ||||||||||| || ||||||| ||| ||||| || || || |||||||| ||||| ||||| ||||| ||||||||||||||||| ||    
T  42413 tgatggcatatttgtcgttagagaatcaagctgcgattgacagattgccggttgtgaatgaatttccagaagtgtttcctgatgagattccagatgtgcc 42314  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||| || || ||||| || || | || ||||||| |||||||||||||||    
T  42313 accagagagggaggttgaattttcaattgaccttgttctaggaacgaagtcggtgtcgatggcac 42249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 3449 - 3269
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| |||||| || || || ||||||||||| ||||| ||  |  | |||| ||| ||||| ||||||||||| ||||    
T  3449 attcttatgttttctttgatggcatacttgtctttggagaatcaagctgtgattgacagtttgtcgtttgtgattgaatttccagaagtttttcctgatg 3350  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||| |||||||||||||||||||| || || ||||| || || | || |||||||||||||||||||||||    
T  3349 agattccagatgtgccaccagagagggaggttgaattttcaattgagcttgttctaggaacgaagccggtgtcgatggcac 3269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 28731 - 28629
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || |||||||| || || ||||| || | |||||| || || | ||||||||| ||||||||||    
T  28731 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagagaagtcgagttttctaatgatcttgttcctggaacgaagccagtgtcgatgg 28632  T
Q  211 cac 213  Q
    |||    
T  28631 cac 28629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 36151 - 36049
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||| ||||  | || ||||| || |||||||| || || | ||||||||||||||||||||    
T  36151 tttcctgaagtttttccagatgaaattcctgatgtgcctccaaagagaaaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 36052  T
Q  211 cac 213  Q
    |||    
T  36051 cac 36049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 5809 - 5896
Alignment:
Q  60 ttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtac 147  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  5809 ttgtcgttagaaaatcaagctgtgattgacaggttaccagtggtgaatgaatttcctgaagtttttctggatgagattccggatgtac 5896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 213
Target Start/End: Original strand, 5641 - 5827
Alignment:
Q  27 gacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttc 126  Q
    ||||| ||||| |||| |||| ||||||||| |||||| || ||||| ||||||||||| |||||||| ||||| |||||||| || ||  ||||||||     
T  5641 gacggaattcttatgttttctttgatggcatacttgtccttggaaaatcaagctgtgattgacaggttgccagttgtgaatgaattcccataagtttttt 5740  T
Q  127 cggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||||||||||||||||| ||| | | |||||||||||| || ||  |||| || || |||| | |||||||||||||||||||||    
T  5741 ctgatgagattccagatgtcccatctgggagggaggttgaattttcacttgaccttgttccaggagcgaagccggtgtcgatggcac 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 99156 - 99258
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    ||||| |||| |||| ||||||||| |||||||||||||||  |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||    
T  99156 attcttatgttttctttgatggcatccttgtcgttagaaaattaagctgtgtttgacatgttaccagtggtgaatgagtttcctgaagtttttccggatg 99255  T
Q  133 aga 135  Q
    |||    
T  99256 aga 99258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 175733 - 175539
Alignment:
Q  19 tagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctga 118  Q
    ||||||| || || ||| |||||| |||| ||||||||| |||||| || || || ||||||||||| || || || ||||| ||| |||| ||||| ||    
T  175733 tagaacgtgatggaattttgatgttttctttgatggcatacttgtcattggagaatcaagctgtgattgatagattgccagttgtgtatgaatttccaga 175634  T
Q  119 agtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||| ||| ||||||  ||||| ||||||||||| |||||||| || || |||||||| |  || | |||||||||||||||||||||||    
T  175633 agtttttcctgataagattcttgatgtgccaccagagagagaggttgaattttcaattgatcttgatcccggaacgaagccggtgtcgatggcac 175539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 99255 - 99315
Alignment:
Q  153 gagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||| || ||||| || |  || | |||||||||||||||||||||||    
T  99255 gagagggaggttgagttttcaattgaccttgctccgggaacgaagccggtgtcgatggcac 99315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 1861 - 2025
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||| ||| ||||||||| || || |||| |||||| || || || || || |||||||| ||||| ||||||||||| ||||||||||| ||||| ||    
T  1861 tgatgacatacttgtcgttggagaatcaagttgtgattgatagattgccggttgtgaatgaatttccggaagtttttcctgatgagattcctgatgtgcc 1960  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||| ||  | ||||||||||| || | |||||| ||||||||||||||||    
T  1961 accagagagggaggttgaatttgcaattgatctagttcctggaacgaatccggtgtcgatggcac 2025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 29242 - 29078
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||||| |||||||||||| || ||||||||||| || || || || || |||||||| |||||   ||||||||| ||||||||||| ||||| ||    
T  29242 tgatggcatacttgtcgttagagaatcaagctgtgattgatagattgcctgttgtgaatgaatttccaatagtttttcctgatgagattcctgatgtgcc 29143  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||| ||||||||||||| ||  | |||||||| || || | |||||||||||||||||||||||    
T  29142 accaaagagggaggttgaatttgcaattgatcttgttcccggaacgaagccggtgtcgatggcac 29078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 28874 - 29038
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||| ||| ||||||||| || || |||| |||||| || || || || || |||||||| ||||| ||||||||||| ||||||||||| ||||| ||    
T  28874 tgatgacatacttgtcgttggagaatcaagttgtgattgatagattgccggttgtgaatgaatttccggaagtttttcctgatgagattcctgatgtgcc 28973  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||||||||||| ||  | ||||||||||| || | |||||| ||||||||||||||||    
T  28974 accagagagggaggttgaatttgcaattgatctagttcctggaacgaatccggtgtcgatggcac 29038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 34068 - 33888
Alignment:
Q  33 attctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatg 132  Q
    |||||||||| |||| ||||||||| |||||| || ||||| ||||| ||||| || ||||| ||| |  ||||||| ||||| ||||| ||||| ||||    
T  34068 attctgatgttttctttgatggcatacttgtcatttgaaaatcaagcggtgattgaaaggttgccaattatgaatgaatttccagaagtgtttcctgatg 33969  T
Q  133 agattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | |||| |||||| |||||||| ||||||||||| || || ||||| || || |||| |||||| ||||||||||||||||    
T  33968 aaattcgagatgtgccaccagaaagggaggttgaattttcaattgaccttgttccaggaacgaatccggtgtcgatggcac 33888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 4668 - 4842
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| ||||||||| |||||||||||| || ||  ||||||| || || || || || |||||| | ||||| ||||||||||| ||||||||||    
T  4668 atgttttctttgatggcatacttgtcgttagagaatcagtctgtgattgatagatttccggttgtgaatcaatttccagaagtttttcctgatgagattc 4767  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    | ||||| |||||||||||||||||||| || || |||||||| || || | || |||||| |||||||||||||    
T  4768 ctgatgttccaccagagagggaggttgaattttcaattgatcttgttccgggaatgaagccagtgtcgatggcac 4842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 1092 - 1298
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    |||||||||| |||||||| || || ||||||||||| ||  |||||||||  |||||||| || || || ||||| || |||| ||||||| |||| |     
T  1092 agatgaagcagctagaacgtgatggaattctgatgtactccttgatggcatcgttgtcgttggagaatcaggctgtaattgacaagttaccaatggtaag 1191  T
Q  107 tgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcg 206  Q
    ||| |||||||| || ||||| ||||||||||| ||||| |  ||||| ||||| ||||| || || ||||| || || |||| ||||||||||||||||    
T  1192 tgattttcctgaggtgtttccagatgagattcctgatgtgctgccagaaagggaagttgaattttcaattgaccttgttccaggaacgaagccggtgtcg 1291  T
Q  207 atggcac 213  Q
    |||||||    
T  1292 atggcac 1298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 65845 - 65955
Alignment:
Q  7 agatgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaa 106  Q
    ||||||| ||||||||||| || || ||||||||||||||| | |||||||  |||||||||||||| || |||||||| ||||||||||||||||||||    
T  65845 agatgaaacaactagaacgtgatggaattctgatgtattctttaatggcatatttgtcgttagaaaatcaggctgtgattgacaggttaccagtggtgaa 65944  T
Q  107 tgagtttcctg 117  Q
    ||| |||||||    
T  65945 tgaatttcctg 65955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 67669 - 67814
Alignment:
Q  21 gaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaag 120  Q
    ||||| ||||||| ||||||||||||| | ||||||   |||||||||||||| |||||||||||  ||||||| || || ||||||| ||| || ||||    
T  67669 gaacgggacgggaatctgatgtattctttaatggcacaattgtcgttagaaaatcaagctgtgattaacaggttgccggtagtgaatgggttcccagaag 67768  T
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttga 166  Q
    | ||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  67769 tgtttcctgatgaaattcctgatgtgccaccagagagggaggttga 67814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 7911 - 7809
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||||||||| || ||||| ||||| ||||| || ||| ||||||| ||||||||||| |||||||| || || ||||||||||||||||||||||    
T  7911 tttcctgaagttttcccagatgaaattcctgatgtgcctccaaagagggaagttgagttctctattgatcttgttcctgaaacgaagccggtgtcgatgg 7812  T
Q  211 cac 213  Q
    |||    
T  7811 cac 7809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 13544 - 13646
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||||||||| ||||| ||||| || ||||||||||| || ||||| || ||||||||||  || | ||||||||||||||||||||    
T  13544 tttcctgaagtttttccggatgaaattcctgatgtgcctccagagagggaagtcgagttttctattgatctagatcctggaacgaagccggtgtcgatgg 13643  T
Q  211 cac 213  Q
    |||    
T  13644 cac 13646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 10889 - 10991
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||||||||| ||||| ||||| || ||||||||||| || ||||| || |||||||| |  || |  |||||||||||||||||||    
T  10889 tttcctgaagtttttccggatgaaattcctgatgtgcctccagagagggaagtcgagttttctattgatcttgctcctgggacgaagccggtgtcgatgg 10988  T
Q  211 cac 213  Q
    |||    
T  10989 cac 10991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 31537 - 31435
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||| | || |||||||| || || ||||| || |||||||| || || | ||| |||| |||||||||||    
T  31537 tttcctgaagtttttccagatgaaattcctgatatgcctccagagagagaagtcgagttttctattgatcttgttcctggaacaaagctggtgtcgatgg 31438  T
Q  211 cac 213  Q
    |||    
T  31437 cac 31435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 37003 - 36901
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||| | || |||||||| || || ||||| || |||||||| || || | ||| |||| |||||||||||    
T  37003 tttcctgaagtttttccagatgaaattcctgatatgcctccagagagagaagtcgagttttctattgatcttgttcctggaacaaagctggtgtcgatgg 36904  T
Q  211 cac 213  Q
    |||    
T  36903 cac 36901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 21936 - 21798
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| ||||||||||||||||| |||||||||||  |||| || |||||||| || |||||||| || |    
T  21936 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccagatgagattcctaatgtgcctccagagagagaagttgagttttcta 21837  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | |||||||||||| ||||||||||    
T  21836 ttgatcttgttcctggaacgaagccggtctcgatggcac 21798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 5012 - 5101
Alignment:
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| || || ||||| || || |||| ||||||||||||||||||||    
T  5012 tttttcctgatgagattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatgg 5101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 9443 - 9532
Alignment:
Q  121 tttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| || || ||||| || || |||| ||||||||||||||||||||    
T  9443 tttttcctgatgagattccagatgtgccaccagagagggaggttgaattttcaattgaccttgttccaggaacgaagccggtgtcgatgg 9532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 482 - 380
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || |||||||| || |||||||| || ||| |||| || || | |||||||||||||| |||||    
T  482 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagagaagttgagttttctattaatcttgttcctggaacgaagccggtgttgatgg 383  T
Q  211 cac 213  Q
    |||    
T  382 cac 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 16761 - 16665
Alignment:
Q  117 gaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||| | ||||||||||||||||| |||||||||||||||||||| || || || ||||| || || | |||||||||||||||||||||||    
T  16761 gaagtttttgctgatgagattccagatgtgccaccagagagggaggttgaattttcaatcgatcttgtgcccggaacgaagccggtgtcgatggcac 16665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 49466 - 49630
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||| | |||||| || || || ||||||||||| || || || || || |||| ||| ||||| ||||||||||| |||||||||||| |||| ||    
T  49466 tgatggcgtacttgtcattggagaatcaagctgtgattgatagattgccggttgtgagtgaatttccagaagtttttcctgatgagattccaaatgtgcc 49565  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||  ||||||||||||| || || |||||||| || || | ||| |||||||||||||||||||    
T  49566 accgaagagggaggttgaattttcaattgatcttgtgcccggaacaaagccggtgtcgatggcac 49630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 40821 - 40706
Alignment:
Q  98 agtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
    |||||||  ||| ||||||||||||||||| ||||||||||| ||||| || |||||||| || || ||||| || |||||||| || || | |||||||    
T  40821 agtggtgtgtgaatttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagtcgagttttctattgatcttgttcctggaacgaag 40722  T
Q  198 ccggtgtcgatggcac 213  Q
    ||||||||||||||||    
T  40721 ccggtgtcgatggcac 40706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 13775 - 13877
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||||||||||||  |||| |||||  |||| || ||||||||||| || ||||| || |||||||| || || |  |||||||||||||||||||    
T  13775 tttcctgaagtttttccaaatgaaattccttatgtgcctccagagagggaagtcgagttttctattgatcttgttcctgggacgaagccggtgtcgatgg 13874  T
Q  211 cac 213  Q
    |||    
T  13875 cac 13877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 9593 - 9491
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| || |||||||| || || | |||||||||||| |||||||    
T  9593 tttcctgaagtttttccagatgagattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaacgaagccggtctcgatgg 9494  T
Q  211 cac 213  Q
    |||    
T  9493 cac 9491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 2575 - 2422
Alignment:
Q  60 ttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagaggg 159  Q
    |||||||| || || ||||||||||| || || || ||||| |||  | | ||||| |||| |||||| |||||||||| |||||| |||||||||||||    
T  2575 ttgtcgttggagaatcaagctgtgattgatagattgccagttgtgggtaaatttccagaagcttttcctgatgagattctagatgtgccaccagagaggg 2476  T
Q  160 aggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || || ||||  || || | |||||||||||||||||||||||    
T  2475 aggttgaattttcaatcgatcatgtgcccggaacgaagccggtgtcgatggcac 2422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 210
Target Start/End: Complemental strand, 10057 - 9922
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || ||| |||| ||||||  ||| ||||||||||||||||||||||||||||| ||||| || | ||||||  | || ||||| || |    
T  10057 caagcagtgattgataggctaccggtggtgtgtgaatttcctgaagtttttccggatgagattcctgatgtgcctctagagagataagtcgagttttcta 9958  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||| || || | ||||||||||||||||||||    
T  9957 ttgatcttgttcctggaacgaagccggtgtcgatgg 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 15645 - 15747
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||||||| | |||||||| ||  ||||||| || || | ||||||||||||||||||||    
T  15645 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagaggtaagttgagttttctgttgatcttgttcctggaacgaagccggtgtcgatgg 15744  T
Q  211 cac 213  Q
    |||    
T  15745 cac 15747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 21257 - 21155
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || |||||||| || |||||||| || |||||||| || || | ||||||||||| ||||||||    
T  21257 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagagaagttgagttttctattgatcttgttcctggaacgaagccggcgtcgatgg 21158  T
Q  211 cac 213  Q
    |||    
T  21157 cac 21155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 36681 - 36611
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatct 181  Q
    ||||||||||||||||| ||||| ||||| ||||| || |||||||| || |||||||| || ||||||||    
T  36681 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagagaagttgagttttctattgatct 36611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 3113 - 2975
Alignment:
Q  75 caagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctcca 174  Q
    ||||| ||||| || |||||||| ||||||  ||| |||||||||||||||||  |||||||||| ||||| || |||||||| || |||||||| || |    
T  3113 caagcagtgattgataggttaccggtggtgtgtgaatttcctgaagtttttccatatgagattcctgatgtgcctccagagagagaagttgagttttcta 3014  T
Q  175 ttgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||| || || | ||| ||||| || ||||||||||    
T  3013 ttgatcttgttcctggaacaaagccagtctcgatggcac 2975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 16813 - 16711
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||| ||||||||||| ||||| ||||| ||||| || ||||||||||| || ||||| || |||||||| || || | ||||||||||||||||||||    
T  16813 tttcccgaagtttttccagatgaaattcctgatgtgcctccagagagggaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 16714  T
Q  211 cac 213  Q
    |||    
T  16713 cac 16711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 37471 - 37573
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || |||||||| || || ||||| || |||||||| ||||| | |||||||||| |||||||||    
T  37471 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagagaagtcgagttttctattgatcttgtacctggaacgaagccgatgtcgatgg 37570  T
Q  211 cac 213  Q
    |||    
T  37571 cac 37573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 17717 - 17819
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||| |||||||||||| ||||||||||| ||||| || |||||||| || || ||||| || |||||||| || || | ||||||||||||||||||||    
T  17717 tttcttgaagtttttccagatgagattcctgatgtgcctccagagagagaagtcgagttttctattgatcttgttcctggaacgaagccggtgtcgatgg 17816  T
Q  211 cac 213  Q
    |||    
T  17817 cac 17819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 1683 - 1779
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcga 207  Q
    ||||||||||||||||| ||||| ||| | |||||||| |||||||| || || ||||| || |||||||| || |||| |||||||||||||||||    
T  1683 tttcctgaagtttttccagatgaaattgctgatgtacctccagagagagaagtcgagttttctattgatcttgttccaggaacgaagccggtgtcga 1779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 213
Target Start/End: Original strand, 8379 - 8494
Alignment:
Q  98 agtggtgaatgagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaag 197  Q
    |||||||  ||| |||||||||||||| || ||||| ||||| ||||| |  |||||||| || |||||||| || ||||||||||| || |  ||||||    
T  8379 agtggtgtgtgattttcctgaagttttcccagatgaaattcctgatgtgcgtccagagagagaagttgagttttctattgatctagttcctgggacgaag 8478  T
Q  198 ccggtgtcgatggcac 213  Q
    ||||||||||||||||    
T  8479 ccggtgtcgatggcac 8494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 213
Target Start/End: Complemental strand, 51566 - 51363
Alignment:
Q  10 tgaagcaactagaacgagacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    |||||||  ||||||| || |||||| | || | |||| ||||||||| |||||| || || || |||| |||||| || |  || || || ||||||||    
T  51566 tgaagcagttagaacgtgatgggattttaatattttctttgatggcatacttgtcattggagaatcaagttgtgattgatatattgccggttgtgaatga 51467  T
Q  110 gtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
     ||||| ||||||||||| || |||||||||  ||| ||||| |||||||||||||| || || || ||||| || ||   ||| |||||||||||||||    
T  51466 atttccagaagtttttcctgacgagattccaattgtgccaccggagagggaggttgaattttcaatcgatcttgtgcccagaacaaagccggtgtcgatg 51367  T
Q  210 gcac 213  Q
    ||||    
T  51366 gcac 51363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 12007 - 12105
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatg 209  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| || ||||| || |||||||| || || | |||||||| ||||||||||    
T  12007 tttcctgaagtttttccagatgaaattccggatgtgcctccagagagggaagtcgagttttctattgatcttgtccctggaacgaagctggtgtcgatg 12105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 43540 - 43469
Alignment:
Q  142 atgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||| |||||||||| || ||||| || || || | |||||||||||||||||||||||    
T  43540 atgtaccaccagagaggaaggttgagttttcaattgaccttgttccgggaacgaagccggtgtcgatggcac 43469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 11545 - 11383
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||| ||| |||||| || || || || |||||||| || || || || || |||||||| ||||| || |||||||| ||||||||||| ||||| ||    
T  11545 tgatgacatacttgtcattggagaatcaggctgtgattgatagattgccggttgtgaatgaatttccagaggtttttcctgatgagattcctgatgtgcc 11446  T
Q  149 accagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
     ||||||||||| ||||| || || ||||||||  | || |  |||||||| |||||||||||    
T  11445 gccagagagggaagttgaattttcaattgatcttattccgggtacgaagcctgtgtcgatggc 11383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 9793 - 9875
Alignment:
Q  27 gacgggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatga 109  Q
    ||||| ||||| |||| |||| |||||||||  ||||||||||| || ||||||||||| |||||||| ||||| ||||||||    
T  9793 gacggaattctaatgttttctttgatggcatatttgtcgttagagaatcaagctgtgattgacaggttgccagttgtgaatga 9875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 25363 - 25457
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||| |||||||| || |||||||| || || | ||||||||| |||||    
T  25363 tttccagaagtatttcctgatgaaattcctgatgtacctccagagagggaagttgagttttcgattgatcttgttcctggaacgaagcctgtgtc 25457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 5316 - 5199
Alignment:
Q  49 tgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattccagatgtacc 148  Q
    ||||||| | ||||||||| || || |||||||| || || || || ||||  |||||||| ||||| ||| ||||||| ||||||||||| ||||| ||    
T  5316 tgatggcgtacttgtcgttggagaatcaagctgtaattgatagatttccagctgtgaatgaatttccagaactttttcctgatgagattcctgatgtgcc 5217  T
Q  149 accagagagggaggttga 166  Q
    ||| || |||||||||||    
T  5216 acctgaaagggaggttga 5199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1985
Description:

Target: scaffold1985; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 223 - 322
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || ||||||||    |||||||| || |||||||| || ||   ||||||||||||||||||||    
T  223 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagag---agttgagttttctattgatcttgttcctagaacgaagccggtgtcgatgg 319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 19989 - 19905
Alignment:
Q  129 gatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    ||||||||||||||||| | |||||||||||||||  | || || ||||| || || |||| ||||||||||||||| |||||||    
T  19989 gatgagattccagatgtgctaccagagagggaggtaaaattttcaattgaccttgttccaggaacgaagccggtgtcaatggcac 19905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 211
Target Start/End: Original strand, 4468 - 4640
Alignment:
Q  39 atgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccggatgagattc 138  Q
    |||| |||| ||||||||| ||| |||||||| || ||| ||||||| || || ||  |  | |||||||| ||||| ||||||||||  ||||||||||    
T  4468 atgttttctttgatggcatacttttcgttagagaatcaaactgtgattgatagattgtcgattgtgaatgaatttccagaagtttttcatgatgagattc 4567  T
Q  139 cagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggc 211  Q
    | ||||| || ||||| ||||| ||||| || || |||||||| || |  |  |||||||| |||||||||||    
T  4568 ctgatgtgccgccagaaagggaagttgaattttcaattgatcttgttctgggtacgaagcctgtgtcgatggc 4640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 145
Target Start/End: Original strand, 4820 - 4935
Alignment:
Q  30 gggattctgatgtattctctgatggcatgcttgtcgttagaaaaccaagctgtgatcgacaggttaccagtggtgaatgagtttcctgaagtttttccgg 129  Q
    |||||| | |||| |||| || |||| | ||||||||| || || ||||||||||| || || || || || |||||||| ||||  ||||||||||| |    
T  4820 gggattttaatgttttctttgttggcgtacttgtcgttggagaatcaagctgtgattgatagattgccggttgtgaatgaatttctagaagtttttcctg 4919  T
Q  130 atgagattccagatgt 145  Q
    ||||||||||||||||    
T  4920 atgagattccagatgt 4935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 1384 - 1478
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||||| ||||||||||| ||||| ||||| ||||| || ||||||| ||| |||||||| || | |||||| ||||| | ||||||||| |||||    
T  1384 tttccagaagtttttcctgatgaaattcctgatgtgcctccagagatggaagttgagttttcaaatgatcttgtacctggaacgaagcctgtgtc 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 12316 - 12246
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatct 181  Q
    ||||||||||||||||| ||||| ||||| ||||| || |||||||| || |||||||| || ||||||||    
T  12316 tttcctgaagtttttccagatgaaattcctgatgtgcctccagagagagaagttgagttttctattgatct 12246  T

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Target: scaffold0215 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 28146 - 28248
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    ||||||||||||||||| ||||| ||||| ||||| || | |||||| || || ||||| || |||||||| || |  | ||| ||||||||||||||||    
T  28146 tttcctgaagtttttccagatgaaattcctgatgtgcctctagagagagaagtcgagttttctattgatcttgttcatggaactaagccggtgtcgatgg 28245  T
Q  211 cac 213  Q
    |||    
T  28246 cac 28248  T

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Target: scaffold0120 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 199
Target Start/End: Complemental strand, 8675 - 8587
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagcc 199  Q
    ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||| || || |||||||| || || | |||||||||    
T  8675 tttccagaagtatttcctgatgaaattcctgatgtgccaccagagagggaagttgaattttctattgatcttgttcctggaacgaagcc 8587  T

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Target: scaffold0358 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 8603 - 8516
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagc 198  Q
    ||||| ||||||||||| ||||| ||||| ||||| || | ||||||||| |||||||| || |||||||| || || | ||||||||    
T  8603 tttccagaagtttttcctgatgaaattcctgatgtgcctctagagagggaagttgagttttcgattgatcttgttcctggaacgaagc 8516  T

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Target: scaffold0358; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 17799 - 17712
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagc 198  Q
    ||||| ||||||||||| ||||| ||||| ||||| || | ||||||||| |||||||| || |||||||| || || | ||||||||    
T  17799 tttccagaagtttttcctgatgaaattcctgatgtgcctctagagagggaagttgagttttcgattgatcttgttcctggaacgaagc 17712  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 151734 - 151647
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagc 198  Q
    ||||| ||||||||||| ||||| ||||| ||||| ||  |||||||||| |||||||| || |||||||| || || | ||||||||    
T  151734 tttccagaagtttttcctgatgaaattccggatgtgccttcagagagggaagttgagttttcgattgatcttgttcctggaacgaagc 151647  T

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Target: scaffold1881 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 1048 - 1150
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatgg 210  Q
    |||||||||||||| || ||||| ||||| ||||| || ||| | ||||| || ||||| || |||||| | || || | |||||||||||||| |||||    
T  1048 tttcctgaagttttcccagatgaaattcctgatgtgcctccaaaaagggaagtcgagttttctattgattttgtccctggaacgaagccggtgttgatgg 1147  T
Q  211 cac 213  Q
    |||    
T  1148 cac 1150  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 7876 - 7782
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||||| ||||||||||| ||||| ||||| ||||| || |||||||| || ||||| || || |||||||| || || | ||||||||| |||||    
T  7876 tttccagaagtttttcctgatgaaattcctgatgtgcctccagagagagaagttgaattttctattgatcttgttcctggaacgaagcctgtgtc 7782  T

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Target: scaffold0040 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 111558 - 111652
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtc 205  Q
    ||||| |||||||||||  |||| ||||| ||||| || ||||| || || |||||||| || |||||||| || |||| ||||||||| |||||    
T  111558 tttccagaagtttttcctaatgaaattcctgatgtgcctccagaaagagaagttgagttttcgattgatcttgttccaggaacgaagcctgtgtc 111652  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 35365 - 35435
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatct 181  Q
    ||||||||||||||||| ||||| ||||| |||||||| | |||||| || ||| |||| || ||||||||    
T  35365 tttcctgaagtttttccagatgaaattcctgatgtacctctagagagagaagttaagttttctattgatct 35435  T

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Target: scaffold0181 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 29592 - 29669
Alignment:
Q  136 ttccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacgaagccggtgtcgatggcac 213  Q
    |||||||||| || | ||||||||| |||||||| || |||||||| || || | ||||||  |||||||||||||||    
T  29592 ttccagatgtgcctctagagagggaagttgagttttctattgatcttgttcctggaacgaaatcggtgtcgatggcac 29669  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 132137 - 132198
Alignment:
Q  108 gagtttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagtt 169  Q
    |||||||||||||||||||||||||| ||| | ||  |||| || |||||||| ||||||||    
T  132137 gagtttcctgaagtttttccggatgatattaccgagttaccgccggagagggaagttgagtt 132198  T

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Target: scaffold0162 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 15563 - 15479
Alignment:
Q  111 tttcctgaagtttttccggatgagattccagatgtaccaccagagagggaggttgagttctccattgatctagtaccagaaacga 195  Q
    ||||||||||||||||||||||| ||| | ||  |||| || |||||||| ||||||||  | |||||| | ||||||| |||||    
T  15563 tttcctgaagtttttccggatgatattaccgagttaccgccggagagggaagttgagtttgcaattgatttggtaccaggaacga 15479  T

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