View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0223_high_50 (Length: 213)
Name: NF0223_high_50
Description: NF0223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0223_high_50
Alignment Details
Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 40145071 - 40145152
Alignment:
Q
16
ccacaaaccctccggtgagatttctttcctcacaccaacatgcaacaaccctaccaagaaaataaccataagttgatcttca
97
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
T
40145071
ccacaaaccctccggtgagatttctttcctcacaccaacatgcaacaaccctaccaagaaaataaccacaagttgatcttca
40145152
T
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