View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0223_low_25 (Length: 361)
Name: NF0223_low_25
Description: NF0223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0223_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 30 - 351
Target Start/End: Complemental strand, 32131488 - 32131167
Alignment:
| Q |
30 |
tagttttcatgaggaattccgtcaggattgatttattgatttgattctttcttggtaagtgatttagatgaatattcattactaactataaacttgccac |
129 |
Q |
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| T |
32131488 |
tagttttcatgaggaattccgtcaggattgatttattgatttgattctttcttggtaagtgatttagatgaatattcattactaactataaacttgccac |
32131389 |
T |
|
| Q |
130 |
attatcaactgactataaactttctccatttctacctataaacttgctgtgtcgttaaaccaacactcctctaagcatctcatcacacttgccacattat |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32131388 |
attatcaactgactataaactttctccatttctacctataaacttgctgtgtcgttaaaccaacactcctctaagcatctcatcacacttgccacattat |
32131289 |
T |
|
| Q |
230 |
caattaactctcatccacctcaacacatttcttcctttcagtttagactttcatacaaactagcttatttgagctcccaacctaaacctgatcaactcct |
329 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32131288 |
caattaactcttatccacctcaacacatttcttcctttcagtttagactttcatacaaactagcttatttgagctcccaacctaaacctgatcaactcct |
32131189 |
T |
|
| Q |
330 |
cattggggttggaggacctatg |
351 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
32131188 |
cattggggttggaggacctatg |
32131167 |
T |
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