View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0223_low_28 (Length: 351)

Name: NF0223_low_28
Description: NF0223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0223_low_28
NF0223_low_28
[»] chr5 (47 HSPs)
chr5 (1-338)||(30119945-30120283)
chr5 (9-121)||(35813231-35813342)
chr5 (7-121)||(28537128-28537242)
chr5 (33-121)||(40384270-40384358)
chr5 (8-118)||(27006334-27006444)
chr5 (8-121)||(31556812-31556925)
chr5 (8-98)||(4674826-4674917)
chr5 (8-121)||(38040260-38040372)
chr5 (6-103)||(42553147-42553243)
chr5 (17-121)||(33599912-33600016)
chr5 (11-98)||(36045145-36045233)
chr5 (7-98)||(37303926-37304018)
chr5 (21-121)||(37986855-37986955)
chr5 (8-98)||(1463864-1463955)
chr5 (8-119)||(10106624-10106735)
chr5 (7-121)||(11246482-11246596)
chr5 (10-120)||(18101938-18102048)
chr5 (7-95)||(6806654-6806743)
chr5 (8-95)||(9963409-9963497)
chr5 (7-95)||(17557023-17557110)
chr5 (11-95)||(24653140-24653223)
chr5 (11-105)||(6447484-6447579)
chr5 (8-119)||(7147009-7147120)
chr5 (8-95)||(19608607-19608694)
chr5 (8-98)||(20735186-20735277)
chr5 (40-95)||(20945905-20945960)
chr5 (40-95)||(31934889-31934944)
chr5 (40-121)||(10943742-10943821)
chr5 (20-97)||(30733125-30733203)
chr5 (9-53)||(1345386-1345430)
chr5 (19-103)||(32252925-32253009)
chr5 (11-98)||(42618424-42618512)
chr5 (6-121)||(31004118-31004233)
chr5 (8-55)||(34325259-34325306)
chr5 (59-121)||(6291040-6291102)
chr5 (7-93)||(13862118-13862203)
chr5 (7-53)||(17178278-17178324)
chr5 (11-121)||(31280368-31280477)
chr5 (11-95)||(18872518-18872602)
chr5 (40-121)||(20699415-20699494)
chr5 (8-93)||(25660906-25660991)
chr5 (16-53)||(31280602-31280639)
chr5 (11-115)||(36741961-36742065)
chr5 (17-121)||(41539319-41539421)
chr5 (65-117)||(22396980-22397032)
chr5 (37-121)||(24362519-24362603)
chr5 (7-55)||(40250231-40250279)
[»] chr1 (57 HSPs)
chr1 (8-121)||(41677054-41677167)
chr1 (4-117)||(9768801-9768914)
chr1 (4-121)||(9769568-9769685)
chr1 (18-121)||(3341724-3341827)
chr1 (7-89)||(42801872-42801954)
chr1 (7-98)||(29491462-29491554)
chr1 (7-98)||(39238708-39238800)
chr1 (17-121)||(43020614-43020718)
chr1 (8-103)||(16182803-16182898)
chr1 (6-121)||(18003808-18003923)
chr1 (8-118)||(11238019-11238129)
chr1 (8-121)||(195038-195151)
chr1 (24-121)||(2903015-2903112)
chr1 (8-119)||(48260179-48260290)
chr1 (9-103)||(5684117-5684210)
chr1 (8-93)||(42908765-42908850)
chr1 (24-121)||(50199464-50199561)
chr1 (65-121)||(12553245-12553301)
chr1 (7-98)||(17350053-17350145)
chr1 (7-98)||(40678815-40678907)
chr1 (8-95)||(2643829-2643916)
chr1 (19-121)||(23758240-23758343)
chr1 (17-95)||(47939213-47939291)
chr1 (17-87)||(47645818-47645888)
chr1 (11-103)||(7015692-7015785)
chr1 (65-121)||(9976372-9976428)
chr1 (65-121)||(33844668-33844724)
chr1 (65-121)||(33949254-33949310)
chr1 (7-98)||(38021244-38021336)
chr1 (8-68)||(51917543-51917603)
chr1 (8-71)||(4146328-4146391)
chr1 (37-120)||(47355756-47355838)
chr1 (8-95)||(52961096-52961183)
chr1 (7-121)||(7906314-7906428)
chr1 (17-98)||(13870092-13870174)
chr1 (39-121)||(23973470-23973552)
chr1 (20-121)||(13941325-13941426)
chr1 (63-112)||(24889189-24889238)
chr1 (6-98)||(25819176-25819269)
chr1 (8-91)||(2052700-2052784)
chr1 (7-118)||(1721133-1721244)
chr1 (8-94)||(9527419-9527506)
chr1 (74-121)||(19866535-19866582)
chr1 (17-72)||(28417315-28417370)
chr1 (19-54)||(34698100-34698135)
chr1 (17-55)||(4605896-4605934)
chr1 (75-117)||(41182835-41182876)
chr1 (22-98)||(17954870-17954947)
chr1 (18-51)||(28284008-28284041)
chr1 (11-95)||(42831944-42832028)
chr1 (14-55)||(47141860-47141901)
chr1 (76-121)||(48565135-48565180)
chr1 (66-121)||(4611218-4611274)
chr1 (10-94)||(19536713-19536796)
chr1 (7-98)||(19976563-19976655)
chr1 (19-95)||(26349993-26350068)
chr1 (25-121)||(35424151-35424247)
[»] chr7 (48 HSPs)
chr7 (11-121)||(35498395-35498504)
chr7 (6-121)||(35195835-35195950)
chr7 (7-121)||(43635581-43635695)
chr7 (13-121)||(24579274-24579382)
chr7 (12-121)||(3246477-3246583)
chr7 (19-121)||(10020457-10020559)
chr7 (4-121)||(1649142-1649259)
chr7 (7-103)||(7392312-7392408)
chr7 (11-90)||(7465463-7465542)
chr7 (4-98)||(31475851-31475946)
chr7 (17-121)||(34693758-34693860)
chr7 (25-105)||(1513498-1513578)
chr7 (7-98)||(24304294-24304386)
chr7 (7-124)||(14818352-14818468)
chr7 (7-124)||(15265350-15265466)
chr7 (8-98)||(41139080-41139171)
chr7 (12-94)||(32814825-32814907)
chr7 (6-98)||(19126728-19126821)
chr7 (12-121)||(37410469-37410578)
chr7 (8-95)||(21285367-21285455)
chr7 (29-121)||(33236255-33236347)
chr7 (8-95)||(38451856-38451944)
chr7 (7-98)||(41417286-41417378)
chr7 (17-121)||(44409204-44409307)
chr7 (24-115)||(23799310-23799401)
chr7 (8-103)||(37917386-37917481)
chr7 (7-100)||(8766822-8766913)
chr7 (39-121)||(39524713-39524794)
chr7 (8-121)||(27726357-27726470)
chr7 (7-95)||(29658286-29658375)
chr7 (11-95)||(11808035-11808119)
chr7 (19-103)||(16814702-16814786)
chr7 (18-102)||(24427367-24427451)
chr7 (7-55)||(45267980-45268028)
chr7 (6-121)||(10958031-10958140)
chr7 (44-95)||(22706042-22706093)
chr7 (78-121)||(26734259-26734302)
chr7 (8-55)||(32514690-32514737)
chr7 (37-95)||(7908732-7908790)
chr7 (40-98)||(31694096-31694154)
chr7 (6-95)||(10474526-10474615)
chr7 (48-121)||(13905971-13906044)
chr7 (11-95)||(34948103-34948187)
chr7 (43-92)||(42887183-42887232)
chr7 (8-44)||(6820831-6820867)
chr7 (7-55)||(17305444-17305492)
chr7 (20-68)||(26560015-26560063)
chr7 (63-115)||(42976594-42976646)
[»] chr2 (52 HSPs)
chr2 (8-121)||(34107268-34107381)
chr2 (11-121)||(39334869-39334979)
chr2 (7-120)||(22355076-22355189)
chr2 (8-121)||(41305054-41305167)
chr2 (7-121)||(1244562-1244676)
chr2 (7-121)||(14307682-14307796)
chr2 (33-117)||(4529755-4529839)
chr2 (17-92)||(11001750-11001825)
chr2 (11-118)||(32288373-32288480)
chr2 (6-98)||(21970450-21970543)
chr2 (7-98)||(29034968-29035060)
chr2 (36-116)||(37123208-37123288)
chr2 (5-95)||(11133066-11133157)
chr2 (20-103)||(44132569-44132652)
chr2 (28-121)||(10602019-10602113)
chr2 (17-103)||(18065257-18065343)
chr2 (6-103)||(22014658-22014760)
chr2 (24-93)||(40471163-40471232)
chr2 (8-121)||(44487755-44487868)
chr2 (36-112)||(7938112-7938188)
chr2 (18-121)||(12206502-12206605)
chr2 (40-95)||(32943365-32943420)
chr2 (11-54)||(44240139-44240182)
chr2 (38-120)||(21874960-21875042)
chr2 (7-115)||(2057474-2057580)
chr2 (1-61)||(19352853-19352913)
chr2 (25-121)||(26975287-26975382)
chr2 (11-98)||(32527088-32527176)
chr2 (8-72)||(36277739-36277803)
chr2 (8-98)||(2304283-2304374)
chr2 (19-94)||(9796903-9796977)
chr2 (40-95)||(18386826-18386881)
chr2 (8-94)||(29664596-29664683)
chr2 (12-98)||(44187701-44187788)
chr2 (28-103)||(45314424-45314499)
chr2 (40-98)||(16028119-16028177)
chr2 (65-115)||(25406644-25406694)
chr2 (77-119)||(36413823-36413865)
chr2 (40-94)||(36426871-36426925)
chr2 (40-98)||(41535215-41535273)
chr2 (11-95)||(580797-580881)
chr2 (12-121)||(18089727-18089836)
chr2 (11-95)||(30474209-30474293)
chr2 (17-54)||(34644540-34644577)
chr2 (75-116)||(42507349-42507390)
chr2 (46-94)||(1962858-1962906)
chr2 (8-95)||(3037636-3037724)
chr2 (11-95)||(3179321-3179405)
chr2 (17-121)||(5029088-5029192)
chr2 (11-55)||(32944059-32944103)
chr2 (11-119)||(34830584-34830691)
chr2 (11-103)||(38807878-38807970)
[»] chr4 (64 HSPs)
chr4 (6-121)||(49039433-49039548)
chr4 (7-121)||(33359810-33359924)
chr4 (6-121)||(54854167-54854282)
chr4 (7-121)||(41492487-41492600)
chr4 (17-121)||(20610742-20610846)
chr4 (7-119)||(36045823-36045935)
chr4 (7-96)||(53815688-53815778)
chr4 (8-98)||(28520742-28520833)
chr4 (8-103)||(49319387-49319482)
chr4 (19-121)||(21023340-21023441)
chr4 (8-121)||(36257688-36257799)
chr4 (44-121)||(47416498-47416575)
chr4 (7-98)||(9692954-9693046)
chr4 (7-98)||(14149785-14149877)
chr4 (8-103)||(42411460-42411556)
chr4 (8-98)||(8690207-8690298)
chr4 (8-98)||(48968221-48968312)
chr4 (40-98)||(34773694-34773752)
chr4 (25-121)||(6481572-6481668)
chr4 (8-95)||(12820419-12820507)
chr4 (17-119)||(24039891-24039989)
chr4 (7-103)||(29785143-29785239)
chr4 (8-98)||(15640454-15640545)
chr4 (8-103)||(20166310-20166405)
chr4 (43-105)||(7768792-7768854)
chr4 (8-82)||(8241400-8241474)
chr4 (8-92)||(2565254-2565339)
chr4 (19-92)||(32887136-32887209)
chr4 (11-95)||(33076529-33076611)
chr4 (11-98)||(36954132-36954221)
chr4 (11-95)||(45350273-45350357)
chr4 (11-95)||(45359752-45359836)
chr4 (7-95)||(48512191-48512280)
chr4 (37-93)||(18497415-18497471)
chr4 (11-94)||(21476096-21476179)
chr4 (7-103)||(30615990-30616089)
chr4 (8-95)||(36008268-36008356)
chr4 (7-87)||(37728932-37729012)
chr4 (5-121)||(49743353-49743469)
chr4 (10-96)||(34106597-34106683)
chr4 (8-103)||(34370917-34371012)
chr4 (44-95)||(35747496-35747547)
chr4 (8-98)||(40150466-40150557)
chr4 (40-95)||(41003186-41003240)
chr4 (40-95)||(44074879-44074934)
chr4 (19-61)||(3465894-3465936)
chr4 (33-119)||(15507565-15507651)
chr4 (27-121)||(23226693-23226787)
chr4 (75-121)||(55967639-55967685)
chr4 (11-103)||(18740922-18741015)
chr4 (6-55)||(27921888-27921937)
chr4 (24-121)||(37997834-37997931)
chr4 (11-95)||(47017960-47018044)
chr4 (38-87)||(48031927-48031976)
chr4 (65-98)||(52330920-52330953)
chr4 (65-102)||(55677156-55677193)
chr4 (17-117)||(11863145-11863245)
chr4 (40-95)||(31578045-31578098)
chr4 (12-72)||(39293519-39293579)
chr4 (17-121)||(42758152-42758255)
chr4 (11-55)||(43049987-43050031)
chr4 (7-98)||(46799400-46799491)
chr4 (11-98)||(52031203-52031291)
chr4 (8-91)||(56531254-56531338)
[»] chr3 (67 HSPs)
chr3 (11-121)||(21248978-21249087)
chr3 (3-120)||(23025886-23026003)
chr3 (20-115)||(4045628-4045723)
chr3 (24-119)||(34407080-34407175)
chr3 (7-121)||(40160728-40160842)
chr3 (7-120)||(24160517-24160630)
chr3 (17-121)||(3993695-3993799)
chr3 (7-98)||(9624975-9625067)
chr3 (7-98)||(27183692-27183784)
chr3 (8-121)||(14868678-14868790)
chr3 (17-116)||(23237365-23237464)
chr3 (12-121)||(36331716-36331824)
chr3 (20-120)||(51017796-51017895)
chr3 (12-103)||(28951864-28951955)
chr3 (7-121)||(24130552-24130666)
chr3 (7-98)||(24559381-24559473)
chr3 (37-121)||(31902194-31902277)
chr3 (43-95)||(37279656-37279708)
chr3 (8-95)||(47191366-47191454)
chr3 (11-121)||(3955302-3955413)
chr3 (7-86)||(16874213-16874292)
chr3 (8-103)||(19137613-19137708)
chr3 (7-94)||(26583094-26583181)
chr3 (8-98)||(28226198-28226289)
chr3 (8-103)||(31108766-31108861)
chr3 (27-105)||(43598811-43598889)
chr3 (11-121)||(50724365-50724472)
chr3 (11-121)||(50788376-50788483)
chr3 (9-55)||(6951844-6951890)
chr3 (11-121)||(31680729-31680838)
chr3 (40-121)||(35483295-35483374)
chr3 (40-98)||(49146110-49146168)
chr3 (11-121)||(49299228-49299337)
chr3 (62-115)||(17262267-17262320)
chr3 (11-95)||(33206754-33206838)
chr3 (7-95)||(43774177-43774266)
chr3 (64-121)||(48659809-48659866)
chr3 (8-93)||(51412006-51412091)
chr3 (17-117)||(794001-794100)
chr3 (12-115)||(3461717-3461821)
chr3 (38-121)||(4478356-4478439)
chr3 (11-95)||(16277965-16278049)
chr3 (75-115)||(22432905-22432945)
chr3 (11-51)||(27043230-27043270)
chr3 (17-121)||(31917856-31917959)
chr3 (8-95)||(7020768-7020855)
chr3 (8-55)||(12236593-12236640)
chr3 (7-90)||(24890066-24890149)
chr3 (19-118)||(32080060-32080159)
chr3 (8-103)||(39946483-39946577)
chr3 (7-89)||(46817343-46817425)
chr3 (8-98)||(52030114-52030205)
chr3 (8-54)||(19149418-19149464)
chr3 (11-121)||(21142721-21142831)
chr3 (11-53)||(38507645-38507687)
chr3 (9-97)||(7448375-7448464)
chr3 (9-97)||(7456517-7456606)
chr3 (40-93)||(26366231-26366284)
chr3 (6-92)||(27119272-27119354)
chr3 (66-103)||(42665931-42665968)
chr3 (37-121)||(6054213-6054297)
chr3 (40-92)||(13539981-13540033)
chr3 (40-92)||(21420206-21420258)
chr3 (12-60)||(30745780-30745828)
chr3 (17-121)||(36842165-36842269)
chr3 (8-55)||(38555081-38555129)
chr3 (75-103)||(55318078-55318106)
[»] scaffold0168 (1 HSPs)
scaffold0168 (7-121)||(34021-34135)
[»] scaffold0119 (1 HSPs)
scaffold0119 (3-121)||(1028-1146)
[»] chr8 (46 HSPs)
chr8 (11-121)||(220350-220460)
chr8 (11-121)||(689505-689615)
chr8 (11-121)||(733973-734083)
chr8 (11-121)||(857869-857979)
chr8 (7-103)||(39432334-39432430)
chr8 (4-121)||(25470834-25470951)
chr8 (8-98)||(2800012-2800103)
chr8 (8-98)||(10292345-10292436)
chr8 (7-98)||(2696525-2696617)
chr8 (8-98)||(10310275-10310366)
chr8 (20-98)||(35301174-35301253)
chr8 (11-121)||(216135-216245)
chr8 (11-121)||(692695-692805)
chr8 (11-121)||(696904-697014)
chr8 (11-121)||(729758-729868)
chr8 (11-121)||(853653-853763)
chr8 (7-121)||(6325264-6325376)
chr8 (20-121)||(11900572-11900672)
chr8 (7-95)||(14012604-14012693)
chr8 (27-124)||(22847247-22847344)
chr8 (11-115)||(7345425-7345529)
chr8 (27-103)||(30500481-30500557)
chr8 (6-53)||(36815519-36815567)
chr8 (12-98)||(22426398-22426485)
chr8 (8-98)||(33982183-33982274)
chr8 (7-98)||(31129297-31129386)
chr8 (7-121)||(44254300-44254414)
chr8 (4-121)||(25408684-25408801)
chr8 (7-98)||(1588759-1588851)
chr8 (65-121)||(12926466-12926522)
chr8 (11-121)||(14010762-14010870)
chr8 (43-98)||(7314762-7314817)
chr8 (43-98)||(35253835-35253889)
chr8 (40-121)||(4798531-4798610)
chr8 (40-94)||(8740671-8740725)
chr8 (40-121)||(25119234-25119313)
chr8 (7-53)||(32940370-32940416)
chr8 (17-95)||(37989055-37989133)
chr8 (11-95)||(15042379-15042463)
chr8 (17-121)||(29653057-29653162)
chr8 (26-118)||(35779767-35779857)
chr8 (11-95)||(43468719-43468803)
chr8 (39-103)||(13654833-13654897)
chr8 (39-103)||(13713475-13713539)
chr8 (12-72)||(36593192-36593252)
chr8 (11-94)||(39484385-39484468)
[»] chr6 (45 HSPs)
chr6 (11-121)||(24256913-24257023)
chr6 (3-121)||(26669647-26669765)
chr6 (8-95)||(8175990-8176077)
chr6 (6-121)||(34524867-34524982)
chr6 (8-121)||(14949007-14949121)
chr6 (7-121)||(22730689-22730804)
chr6 (8-119)||(30833011-30833122)
chr6 (15-92)||(20858400-20858477)
chr6 (8-95)||(5134448-5134536)
chr6 (11-95)||(32394022-32394106)
chr6 (8-98)||(6143958-6144048)
chr6 (8-98)||(14981713-14981804)
chr6 (17-115)||(1488091-1488189)
chr6 (7-98)||(9064858-9064950)
chr6 (11-121)||(9422830-9422941)
chr6 (8-98)||(24470402-24470493)
chr6 (40-95)||(30566084-30566139)
chr6 (24-102)||(17751344-17751422)
chr6 (8-94)||(25064684-25064770)
chr6 (17-95)||(32540965-32541043)
chr6 (8-121)||(6455447-6455560)
chr6 (76-124)||(7234027-7234075)
chr6 (7-55)||(17176142-17176190)
chr6 (12-120)||(29204858-29204966)
chr6 (40-95)||(9438328-9438383)
chr6 (17-123)||(10424523-10424626)
chr6 (17-60)||(14948833-14948876)
chr6 (9-72)||(19135924-19135987)
chr6 (40-95)||(19165377-19165431)
chr6 (7-92)||(2945588-2945674)
chr6 (7-53)||(6219347-6219393)
chr6 (8-94)||(9031760-9031846)
chr6 (19-121)||(31595176-31595278)
chr6 (11-95)||(22389764-22389848)
chr6 (76-117)||(29430295-29430336)
chr6 (12-121)||(33947381-33947490)
chr6 (7-94)||(3448344-3448432)
chr6 (23-103)||(8253597-8253676)
chr6 (8-103)||(10455736-10455832)
chr6 (65-121)||(19680236-19680292)
chr6 (40-96)||(23771059-23771115)
chr6 (11-94)||(32057031-32057114)
chr6 (59-95)||(32344684-32344720)
chr6 (65-121)||(34675794-34675850)
chr6 (8-95)||(34883734-34883819)
[»] scaffold0036 (1 HSPs)
scaffold0036 (8-94)||(25019-25106)
[»] scaffold0765 (1 HSPs)
scaffold0765 (14-95)||(744-825)
[»] scaffold0009 (1 HSPs)
scaffold0009 (40-119)||(108353-108430)
[»] scaffold0809 (1 HSPs)
scaffold0809 (8-98)||(4817-4907)
[»] scaffold0005 (1 HSPs)
scaffold0005 (65-121)||(270726-270782)
[»] scaffold1086 (1 HSPs)
scaffold1086 (40-95)||(2514-2569)
[»] scaffold0308 (1 HSPs)
scaffold0308 (8-98)||(7069-7160)
[»] scaffold0227 (1 HSPs)
scaffold0227 (8-98)||(21843-21933)
[»] scaffold0054 (1 HSPs)
scaffold0054 (17-121)||(67164-67268)
[»] scaffold0178 (1 HSPs)
scaffold0178 (17-98)||(4326-4407)
[»] scaffold0111 (1 HSPs)
scaffold0111 (49-95)||(37372-37418)
[»] scaffold0219 (1 HSPs)
scaffold0219 (19-60)||(21013-21054)
[»] scaffold0712 (1 HSPs)
scaffold0712 (7-55)||(4513-4561)
[»] scaffold0709 (1 HSPs)
scaffold0709 (7-55)||(4533-4581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (11-95)||(37342-37426)


Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 30119945 - 30120283
Alignment:
Q  1 tcgttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttga 100  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||| | |||||||| |||||||| | |||||||| |||||||||||||| |    
T  30119945 tcgttgtgtccccgtgagcatagctcagttgacaaggacatgcattattatacgttgaggttggggttcgaatttcggacacctcacttattcactttaa 30120044  T
Q  101 aaatggtaaattctagccacttgatnnnnnnnnnnnnnn--tattcgccgtaaattgcttatctctaatctcttatctttattctttaccttatcaaatt 198  Q
    |||||||||||||||||||||||||                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30120045 aaatggtaaattctagccacttgataaaaaaaaataaaaaatattcgccgtaaattgcttatctctaatctcttatctttattctttaccttatcaaatt 30120144  T
Q  199 atgccaaaattgacttagcttttggagtaccatttgcataaacctcatcctgtttcaattgagccccttatagtaaacagtgtgcttaatatctaagatt 298  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30120145 atgccaaaattgacttagcttttggagtaccatttgcataaatctcatcctgtttcaattgagccccttatagtaaacagtgtgcttaatatct-agatt 30120243  T
Q  299 agttggttccttctaaaagaaaatctagattagttggtct 338  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30120244 agttggttccttctaaaagaaaatctagattagttggtct 30120283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 35813342 - 35813231
Alignment:
Q  9 tccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggta 108  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||| | || | |||||||||  | ||||||||||||||||| ||||||||| |||     
T  35813342 tccccgtgagcatagctcagttgacagggacatgcattgttatatgcaggggctcaggttcgaacccaggacaccccacttattc-ctttgaaaaaggtg 35813244  T
Q  109 aattctagccact 121  Q
    |||||||||||||    
T  35813243 aattctagccact 35813231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 28537128 - 28537242
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| |||||| |||| ||||||  |||||||||| ||||||||   ||  | ||||||||  ||||||||||||||||||||||||||||||||    
T  28537128 tgtccccgtgagcataactcaattgacatggacatgcattgttatatgcatgggccggggttcgaaccccggacaccccacttattcactttgaaaatgg 28537227  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  28537228 tgaattctagccact 28537242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 40384270 - 40384358
Alignment:
Q  33 cagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||||||||||||||||| | || || |||||||| |||||||||||||||||||||| || |||| ||| |||||||||||||    
T  40384270 cagagacatgcattattatatgcagcggctggggttcgaactccggacaccccacttattcaccttaaaaaaggtgaattctagccact 40384358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 27006334 - 27006444
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| ||||||| |||| || ||| | |||||||| |||||||||| ||| | |||||||| ||||||||| |||||||||||| ||||||| |||    
T  27006334 gtccccgtgagcataggtcagatggcaggggcatgcattgttatatgctggggtcggggttcgaactccggacactccacttattcaccttgaaaaaggt 27006433  T
Q  108 aaattctagcc 118  Q
     ||||||||||    
T  27006434 gaattctagcc 27006444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 31556812 - 31556925
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| ||||||||||| ||  ||| |||||||||| |||||||| | ||| |  |||||||  ||||||||||||||||||||| ||||||| |||    
T  31556812 gtccccgttagcatagctcacttagcagggacatgcattgttatatgcaggggtcggagttcgaaccccggacaccccacttattcaccttgaaaagggt 31556911  T
Q  108 aaattctagccact 121  Q
     |||||||||||||    
T  31556912 gaattctagccact 31556925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 4674917 - 4674826
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||| ||| ||||||||||||||||||| |||| ||||||||||||||| | ||| | ||||||||  ||||||||||||||||||||||||    
T  4674917 gtcctcgtgagcatagctcagttgacagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttt 4674826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 38040260 - 38040372
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||| | ||||||||||||||| ||| |||||||||| |||||||| | ||| |||||||||| | |||||| ||||||||||||  ||||||| |||    
T  38040260 gtccccatgagcatagctcagttggcagggacatgcattgttatatgcaggggtcgaggttcgaact-cggacatcccacttattcatcttgaaaaaggt 38040358  T
Q  108 aaattctagccact 121  Q
     |||| ||| ||||    
T  38040359 gaattatagtcact 38040372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 42553243 - 42553147
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||| ||||||||||||||||||  |||||||||| |||||||| | ||| | ||||||||  ||||||||  ||||||||||| |||||||    
T  42553243 gtgtccccgtgagcatagctcagttgacaacgacatgcattgttatatgcag-ggtcggggttcgaaccccggacactacacttattcaccttgaaaa 42553147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 33599912 - 33600016
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    ||||| ||||||||| |||| ||||||||||||||||   |  |||| ||||||||  ||||||| ||||||||||||| || |||| ||||||||| ||    
T  33599912 agcattgctcagttggcagaaacatgcattattatatataggagttggggttcgaatcccggacatcccacttattcaccttaaaaaaggtaaattccag 33600011  T
Q  117 ccact 121  Q
    |||||    
T  33600012 ccact 33600016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 36045233 - 36045145
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||| ||||||||||||||||||   ||| ||||||||||||||| | ||| | ||||||||  ||||||||||||||||||||||||    
T  36045233 cccgtgagcatagctcagttgacaagaacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttt 36045145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 37303926 - 37304018
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||| |||| || |||||||||||| | ||| | ||||||||  | ||||||||||||||||||||||    
T  37303926 tgtccccgtgagcatagctcagttggcagggacaatgtattattatatgcaggggtcggggttcgaaccctggacaccccacttattcacttt 37304018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 37986955 - 37986855
Alignment:
Q  21 tagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccac 120  Q
    ||||||||||   ||||| |||||||||||||||| ||||| |  ||| |||  ||||||| ||||||||||||| ||||||| ||| ||||||||||||    
T  37986955 tagctcagttagtagagatatgcattattatatgcagaggtcggagtttgaaccccggacatcccacttattcaccttgaaaaaggtgaattctagccac 37986856  T
Q  121 t 121  Q
    |    
T  37986855 t 37986855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 1463864 - 1463955
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||| || ||||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  1463864 gtccctgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 1463955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 10106624 - 10106735
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||  ||||||||||||||| ||| ||||| ||||||||||||  | ||   | |||||||  ||||||||||||||||||||  ||||||| ||     
T  10106624 gtccccgcgagcatagctcagttggcagggacatccattattatatgtaggggccaaagttcgaaccccggacaccccacttattcatcttgaaaaaggc 10106723  T
Q  108 aaattctagcca 119  Q
    ||||||||||||    
T  10106724 aaattctagcca 10106735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 11246596 - 11246482
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    |||| |||| ||||||||||||||| ||| |||||||||| |||||||| | ||| | || || ||  || |||| ||||||||||||  ||||||| ||    
T  11246596 tgtcaccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcggggctcaaaccccagacatcccacttattcagcttgaaaaagg 11246497  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  11246496 tgaattctagccact 11246482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 18102048 - 18101938
Alignment:
Q  10 ccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaa 109  Q
    |||||| |||||||||| ||||| ||||||||| |||||||||||| | ||  |  |||||||  || |||||||||||||||||| || |||||| | |    
T  18102048 ccccgtgagcatagctcggttgatagagacatgtattattatatgcaggggccggagttcgaaccccagacaccccacttattcaccttaaaaatgatga 18101949  T
Q  110 attctagccac 120  Q
    |||||| ||||    
T  18101948 attctaaccac 18101938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 6806743 - 6806654
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||| ||||||||||||||| ||||||| ||||||| |||||||| | ||| | | ||||||  |||||||| ||||||||||||    
T  6806743 tgtccccgtgagcatagctcagttggcagagacaatgcattgttatatgcaggggtcgggattcgaaccccggacactccacttattcac 6806654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 9963409 - 9963497
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||| || |||||||||||| ||| |||| |||||| |||||||| | ||||| |||||||| | ||||| ||||||||||||||    
T  9963409 gtccccgtgagtatagctcagttggcagggacaatgcattgttatatgcaggggttggggttcgaacttcggaccccccacttattcac 9963497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 17557023 - 17557110
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||| ||| || |||||||| |||||||||||||| |||||||  | ||| | ||||| ||| |||||||||||||||||||||    
T  17557023 tgtccccgtgagcctaactcagttggcagagacatgcattgttatatgtaggggtcggggttc-aaacccggacaccccacttattcac 17557110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 24653140 - 24653223
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||| |||||||| || |||||||||||||||||||| | ||||| |||||||| | | ||||| ||||||||||||    
T  24653140 cccgtgagcataactcagttggca-agacatgcattattatatgcaggggttggggttcgaatttcagacactccacttattcac 24653223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 6447579 - 6447484
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    ||||| |||||| |||||||| ||| |||| ||||||||||||||| | ||  | ||||||||   ||||||||||||||||||||||| ||||||    
T  6447579 cccgtgagcataactcagttggcagggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcactttaaaaatg 6447484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 7147120 - 7147009
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| |||||||||||||||  |  ||||||||||||||||||| | ||| | ||||||||   | |||||| || ||||| || ||||||| |||    
T  7147120 gtccccgtgagcatagctcagttggtaaggacatgcattattatatgcaggggtcggggttcgaacctctgacacctcatttatttacattgaaaaaggt 7147021  T
Q  108 aaattctagcca 119  Q
     |||||||||||    
T  7147020 gaattctagcca 7147009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 19608607 - 19608694
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||| | |||||||||||||||| ||  | |||||||||||||||| | ||| | |||||||| |||||||||  |||||||||||    
T  19608607 gtccccatgagcatagctcagttgataggaatatgcattattatatgcaggggtcggggttcgaactccggacacttcacttattcac 19608694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 20735277 - 20735186
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| | ||||||||||||| ||| |||| ||||||||||||||  | ||  | ||||||||  ||||||||||||||||||||||||    
T  20735277 gtccccgtgaacatagctcagttggcagggacaatgcattattatatgtaggggccggggttcgaatcccggacaccccacttattcacttt 20735186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 20945960 - 20945905
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||| | ||  | |||||||||||||||||||||||||||||||    
T  20945960 atgcattattatatgcaggggccggggttcgaaatccggacaccccacttattcac 20945905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 31934944 - 31934889
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||| ||| |||||||||||| | ||||||||||| ||||||||    
T  31934944 atgcattattatatgcagagattgaggttcgaatttcggacaccccatttattcac 31934889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 10943742 - 10943821
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||||||||| | ||  | ||||||||  |||||||||||||||||||||||| ||||  || |||||||||||||    
T  10943742 atgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaaa--gtgaattctagccact 10943821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 30733125 - 30733203
Alignment:
Q  20 atagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactt 97  Q
    |||||||||||| ||| |||| || |||||||||||| |||||   |||||||| ||||||||| ||||||||||||||    
T  30733125 atagctcagttggcagggacaatgtattattatatgcagaggtcagggttcgaactccggacactccacttattcactt 30733203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 1345430 - 1345386
Alignment:
Q  9 tccccgtaagcatagctcagttgacagagacatgcattattatat 53  Q
    ||||||| | ||||||||||||||||||||||| |||||||||||    
T  1345430 tccccgtgaacatagctcagttgacagagacatacattattatat 1345386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 32253009 - 32252925
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||||||| |  ||||||||||||||||||  | ||| | ||||||||  || ||||||| | ||||||||||||||||    
T  32253009 catagctcagttgataaggacatgcattattatatgtaggggtcggggttcgaaccccagacacccaatttattcactttgaaaa 32252925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 42618512 - 42618424
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||| |||||| |||||||| ||| |||| ||||||||||||| | | ||| | ||||||||  ||||| ||||||||||||||||||    
T  42618512 cccgtgagcatacctcagttggcagggacaatgcattattatatacaggggtcggggttcgaatcccggataccccacttattcacttt 42618424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 31004233 - 31004118
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    |||||||||| |||||| |||| |||  || ||||| |||| ||||| || || |||| |||| |||  |||||||  |||||||||||| || |||| |    
T  31004233 gtgtccccgtgagcataactcaattggtagggacatacattgttataggcagaagttggggtttgaaccccggacattccacttattcaccttaaaaaag 31004134  T
Q  106 gtaaattctagccact 121  Q
    ||||||||||| ||||    
T  31004133 gtaaattctagtcact 31004118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 34325259 - 34325306
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    |||||||| | ||| ||||||||||||| |||||||||||||||||||    
T  34325259 gtccccgtgaacatggctcagttgacagggacatgcattattatatgc 34325306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 6291040 - 6291102
Alignment:
Q  59 ggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||||||||  || ||||||||| |||||||| ||||||| ||| ||||||| |||||    
T  6291040 ggttgaggttcgaaccccagacaccccatttattcacattgaaaaaggtgaattctaaccact 6291102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 13862118 - 13862203
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattc 93  Q
    ||||||||| ||||||| ||||||||||  || ||||||| |||||||| | ||| |  |||||||  |||||||||||||||||||    
T  13862118 tgtccccgtgagcatagttcagttgacatggatatgcattgttatatgcaggggtcggagttcgaac-ccggacaccccacttattc 13862203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 17178324 - 17178278
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatat 53  Q
    |||| |||| ||||||||||||||||||| |||||||||| ||||||    
T  17178324 tgtctccgttagcatagctcagttgacagggacatgcattgttatat 17178278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 31280477 - 31280368
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| |||||| |||| ||||||| | ||   |||||||||  ||| ||| ||||||||| ||| ||||||| ||| ||    
T  31280477 cccgtgagcatagctcagttggcagggacatgtattactatatgcaggggccaaggttcgaaccccgaaca-cccacttatccaccttgaaaaaggtgaa 31280379  T
Q  111 ttctagccact 121  Q
    ||||| |||||    
T  31280378 ttctacccact 31280368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 18872518 - 18872602
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| | ||| | ||||||||  ||| |||||||||||||||||    
T  18872518 cccgtgagcatagctcagttggtag-gacaatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcac 18872602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 20699494 - 20699415
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||||||||| | || ||| ||||||||  |||||||||||||||||||| || || | ||| |||||||||||||    
T  20699494 atgcattattatatgcgg-ggctgaagttcgaaactcggacaccccacttattcacctt-aataaggtgaattctagccact 20699415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 25660906 - 25660991
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattc 93  Q
    |||||||| ||||||||||||||| ||| || ||||||| |||||||| | ||  | | ||||||  || ||||||||||||||||    
T  25660906 gtccccgtgagcatagctcagttggcagggatatgcattgttatatgcaggggccgggattcgaaccccagacaccccacttattc 25660991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 31280639 - 31280602
Alignment:
Q  16 aagcatagctcagttgacagagacatgcattattatat 53  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  31280639 aagcatagctcagttggcagggacatgcattattatat 31280602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 36742065 - 36741961
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggaca-ccccacttattcactttgaaaatggtaa 109  Q
    ||||| ||||||||||||||| |||||||||| ||| |||||||| | | | | ||||||||  | ||||| ||||||| | |||||||||||| ||| |    
T  36742065 cccgtgagcatagctcagttggcagagacatgaattgttatatgcagggatcggggttcgaaccctggacacccccactca-tcactttgaaaaaggtga 36741967  T
Q  110 attcta 115  Q
    ||||||    
T  36741966 attcta 36741961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 41539319 - 41539421
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||||||||||||   | ||||||||| ||||||||| | |||||  |||||||  || ||||||||||||||| |  ||||||| ||| ||||||||    
T  41539319 agcatagctcagttgg--gggacatgcataattatatgcaggggttgtagttcgaaccccagacaccccacttattaatcttgaaaaaggtgaattctag 41539416  T
Q  117 ccact 121  Q
     ||||    
T  41539417 tcact 41539421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 22397032 - 22396980
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagc 117  Q
    ||||||||  ||||||||||||||||||||  ||||||| ||| |||||||||    
T  22397032 ggttcgaaccccggacaccccacttattcatcttgaaaagggtgaattctagc 22396980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 24362519 - 24362603
Alignment:
Q  37 gacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||||||||||||| || || | ||||||||  | |||||||| |||| ||||| ||| ||| |||| |||||| |||||    
T  24362519 gacatgcattattatatgcagaagtcggggttcgaaccctggacaccctacttgttcacgttgtaaaaggtagattctaaccact 24362603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 40250279 - 40250231
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    ||||||||| ||||||||||||||| |||  ||||||||| ||||||||    
T  40250279 tgtccccgtgagcatagctcagttggcagtaacatgcattgttatatgc 40250231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 41677054 - 41677167
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| ||| ||||||||||| ||||||||| ||||||||||||| | ||| | |||||||| |||||||||||||||||||||| ||||||| |||    
T  41677054 gtccccgtgagcgtagctcagttggcagagacattcattattatatgcgggggtcggggttcgaactccggacaccccacttattcaccttgaaaaaggt 41677153  T
Q  108 aaattctagccact 121  Q
     |||||||||||||    
T  41677154 gaattctagccact 41677167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 9768914 - 9768801
Alignment:
Q  4 ttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||||| ||||||||||||||| ||| |||||||||| |||||||| | ||| | ||||||||  ||||||||||||||||||||| |||||||    
T  9768914 ttgtgtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttgaaaa 9768815  T
Q  104 tggtaaattctagc 117  Q
     ||| |||||||||    
T  9768814 aggtgaattctagc 9768801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 9769685 - 9769568
Alignment:
Q  4 ttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||  | ||||||||||||||| ||| ||||||||||||||||||  | | ||| ||||||||  ||||||||||||||||||||| |||||||    
T  9769685 ttgtgtcccaatgagcatagctcagttggcagggacatgcattattatatgtagggattggggttcgaaccccggacaccccacttattcaccttgaaaa 9769586  T
Q  104 tggtaaattctagccact 121  Q
     ||| ||||||| |||||    
T  9769585 aggtgaattctaaccact 9769568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 3341827 - 3341724
Alignment:
Q  18 gcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagc 117  Q
    |||||||||||||| ||| ||||||||||||||||||| | ||  | || |||||  ||||||||||||||||||||| ||||||| ||| |||||||||    
T  3341827 gcatagctcagttggcagggacatgcattattatatgcaggggccggggatcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagc 3341728  T
Q  118 cact 121  Q
    ||||    
T  3341727 cact 3341724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 42801872 - 42801954
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccactt 89  Q
    ||||||||| | |||||||||||||||||||||||||||| |||||||| ||||||| ||||||||  || ||||||||||||    
T  42801872 tgtccccgtgaacatagctcagttgacagagacatgcattgttatatgcagaggttggggttcgaaccccagacaccccactt 42801954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 29491462 - 29491554
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||| | ||||||||  ||||||||||||||||||||||||    
T  29491462 tgtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttt 29491554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 39238708 - 39238800
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  ||||||||||  ||||||||||||||||||||||||    
T  39238708 tgtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccgaggttcgaaccccggacaccccacttattcacttt 39238800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 43020614 - 43020718
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||||||| |||| ||| ||||||||||||||||||| | ||||| ||||||||   ||||||||||||| |||||| |||||||  || ||||||||    
T  43020614 agcatagctcggttggcagggacatgcattattatatgcaggggttggggttcgaacctcggacaccccactcattcaccttgaaaaatgtgaattctag 43020713  T
Q  117 ccact 121  Q
    |||||    
T  43020714 ccact 43020718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 16182803 - 16182898
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||  | || || ||||| ||  ||||||||||||||||||||  |||||||    
T  16182803 gtccgcgtaagcatagctcagttggcagagacatgcattattatatgtaggggctggggttcaaaccccggacaccccacttattcatcttgaaaa 16182898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 18003808 - 18003923
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    |||||||||| ||||||||||||||| ||| |||||||||| |||||||| | ||  | |||||||   ||| ||||||||||||||||| | ||||| |    
T  18003808 gtgtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttcgagccccgaacaccccacttattcacctggaaaaag 18003907  T
Q  106 gtaaattctagccact 121  Q
    || |||||||||||||    
T  18003908 gtgaattctagccact 18003923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 11238129 - 11238019
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||| ||| |||||||||||| || ||  ||||||||||||||||||| | ||| | ||||||||  ||||||||||||||||||||  ||||||| |||    
T  11238129 gtcctcgtgagcatagctcagatggcatggacatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcatcttgaaaaaggt 11238030  T
Q  108 aaattctagcc 118  Q
     ||||||||||    
T  11238029 gaattctagcc 11238019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 195038 - 195151
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    ||||| || ||| ||||||||||| ||| ||||||||| ||||||||| | || ||||||||| |  || |||||||||||||||||| ||||||| |||    
T  195038 gtccctgtgagcgtagctcagttggcagggacatgcataattatatgcaggggctgaggttcgtaccccagacaccccacttattcaccttgaaaaaggt 195137  T
Q  108 aaattctagccact 121  Q
     ||||||| |||||    
T  195138 gaattctaaccact 195151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 2903112 - 2903015
Alignment:
Q  24 ctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||| ||| |||||||||| |||||||| ||||| | ||||||||  ||| ||||||||||||||||| ||||||| ||  |||||||||||||    
T  2903112 ctcagttgccagggacatgcattgttatatgcagaggtcggggttcgaaccccgaacaccccacttattcaccttgaaaaaggagaattctagccact 2903015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 48260290 - 48260179
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| ||||||||||||||| ||| ||  ||||||||||||||  | ||| |  |||||||  ||||||||||||||||||||| |||||||  ||    
T  48260290 gtccccgtgagcatagctcagttggcagggatgtgcattattatatgtcggggtcggagttcgaaccccggacaccccacttattcaccttgaaaaatgt 48260191  T
Q  108 aaattctagcca 119  Q
     |||||||||||    
T  48260190 gaattctagcca 48260179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 5684117 - 5684210
Alignment:
Q  9 tccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| | |||| ||| | |||   | ||||||||||||||||||||| ||||    
T  5684117 tccctgtaagcatagctcagttggcagagacatgcattattatatgcaggggtt-aggattgaacctcagacaccccacttattcactttaaaaa 5684210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 42908765 - 42908850
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattc 93  Q
    |||||||| ||| ||||||||||| ||| |||||||||| |||||||| | ||| | |||||||| |||||| |||||||||||||    
T  42908765 gtccccgtgagcttagctcagttggcagggacatgcattgttatatgcaggggtcggggttcgaactccggataccccacttattc 42908850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 50199561 - 50199464
Alignment:
Q  24 ctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||  || |||||||||| |||||||| | ||  | ||||||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  50199561 ctcagttggtagggacatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgaaaaaggtcaattctagccact 50199464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 12553245 - 12553301
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  12553245 ggttcgaaccccggacaccccacttattcactttgaaaaaggtgaattctagccact 12553301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 17350053 - 17350145
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| || |||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  17350053 tgtccccgtgagtatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 17350145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 40678815 - 40678907
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  | |||||||   ||||||||||||||||||||||||    
T  40678815 tgtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgatccccggacaccccacttattcacttt 40678907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 2643916 - 2643829
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||||   ||| | |||| |||  || ||||||||||||||||||    
T  2643916 gtccccgtgagcatagcttagttggcagagacatgcattattatatgcatgggtcggggtttgaaccccagacaccccacttattcac 2643829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 23758343 - 23758240
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccac-ttattcactttgaaaatggtaaattctagc 117  Q
    ||||||||||||| |||| || ||||||||||||||| | ||||||||||||||  ||| ||||||||| |||||||  || ||||| || ||||||| |    
T  23758343 catagctcagttggcagaaacgtgcattattatatgcaggggttgaggttcgaaccccgaacaccccactttattcatcttaaaaattgtgaattctaac 23758244  T
Q  118 cact 121  Q
    ||||    
T  23758243 cact 23758240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 47939291 - 47939213
Alignment:
Q  17 agcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||||||||| ||| |||| |||||| |||||||| | ||||| |||||||| ||||||||||||||||||||||    
T  47939291 agcatagctcagttggcagggacaatgcattgttatatgcag-ggttggggttcgaactccggacaccccacttattcac 47939213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 47645888 - 47645818
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccac 87  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||| | ||||||||  |||||||| ||||    
T  47645888 agcatagctcagttggcagagacatgcattgttatatgcagaggtcggggttcgaagcccggacactccac 47645818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 7015785 - 7015692
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccactt-attcactttgaaaa 103  Q
    ||||| ||||||||||||||| | | |||||||||| |||||||  | || ||||||||||| |||| ||||||||||| |||||| |||||||    
T  7015785 cccgtgagcatagctcagttggctgggacatgcattgttatatgtaggggctgaggttcgaactccgaacaccccacttaattcaccttgaaaa 7015692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 9976428 - 9976372
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||| |||||||||||||||||||||| |||||||  || |||||||||||||    
T  9976428 ggttcgaactccggacaccccacttattcaccttgaaaaaagtgaattctagccact 9976372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 33844668 - 33844724
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||  ||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  33844668 ggttcgaaccccggacaccccacttattcactttgaaaaaggtgaattatagccact 33844724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 33949310 - 33949254
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||  ||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  33949310 ggttcgaaccccggacaccccacttattcactttgaaaaaggtgaattatagccact 33949254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 38021244 - 38021336
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||  |||| ||||||||||||||| | ||  |  |||||||  ||||||||||||||||||||||||    
T  38021244 tgtccccgtgagcatagctcagttggcaaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcacttt 38021336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 51917603 - 51917543
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggtt 68  Q
    |||||||| ||||||||||||||| || |||||||||||||||||||| || |||| ||||    
T  51917603 gtccccgtgagcatagctcagttggcatagacatgcattattatatgcagatgttggggtt 51917543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 4146328 - 4146391
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcga 71  Q
    |||| ||| |||||||||||||||||||| ||||||||| |||||||| | |||||| ||||||    
T  4146328 gtcctcgtgagcatagctcagttgacagaaacatgcattgttatatgcaggggttgaagttcga 4146391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 47355838 - 47355756
Alignment:
Q  37 gacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccac 120  Q
    ||||||||| ||||||||  | ||||||| ||||||  || |||||| ||||||||||| ||||||| ||||||||||||||||    
T  47355838 gacatgcataattatatgtaggggttgagattcgaac-ccagacacctcacttattcaccttgaaaagggtaaattctagccac 47355756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 52961183 - 52961096
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||| ||||||||||||||| ||  |||||||||| |||||||| | ||  | ||||||||  |||||| ||||||||||||||    
T  52961183 gtccccgtgagcatagctcagttggcaaggacatgcattgttatatgcaggggccggggttcgaaccccggacgccccacttattcac 52961096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 7906428 - 7906314
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| ||||||| |||||||  || |||||||||| |||||||| | || || ||||||||  | ||||||||| |||||| || || ||||  |    
T  7906428 tgtccccgtgagcatagttcagttggtagggacatgcattgttatatgcaggggctggggttcgaacccgggacaccccgcttattgaccttaaaaaatg 7906329  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  7906328 tgaattctagccact 7906314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 13870174 - 13870092
Alignment:
Q  17 agcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||||||||| ||| |||| ||||||||||||||| | ||  | |||| |||  ||||||||||||||||||||||||    
T  13870174 agcatagctcagttggcagggacaatgcattattatatgcaggggccggggtttgaatcccggacaccccacttattcacttt 13870092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 23973552 - 23973470
Alignment:
Q  39 catgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||||||||||   ||||| | ||||||  ||| ||||||||||||||||| |||||||  || |||||||||||||    
T  23973552 catgcattattatatgcaagggttgggattcgaaccccgtacaccccacttattcacgttgaaaaatgtgaattctagccact 23973470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 13941325 - 13941426
Alignment:
Q  20 atagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcca 119  Q
    |||| ||||||| ||  |||||||||| |||||||| | | | |||||||||| | |||||||||||||||||||  |||||||  || ||||||| |||    
T  13941325 atagttcagttggcaaggacatgcattgttatatgcagggttcgaggttcgaacttcggacaccccacttattcatcttgaaaaaagtgaattctaacca 13941424  T
Q  120 ct 121  Q
    ||    
T  13941425 ct 13941426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 24889189 - 24889238
Alignment:
Q  63 gaggttcgaaatccggacaccccacttattcactttgaaaatggtaaatt 112  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||| ||||    
T  24889189 gaggttcgaactccgaacaccccacttattcactttgaaaaaggtgaatt 24889238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 25819176 - 25819269
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||| ||||||||||||||| ||| ||| |||||||||||||||  |  |  | ||||||||  ||||| ||||||||||||||||||    
T  25819176 gtgtccccgtgagcatagctcagttggcagggacaatgcattattatatgtaggagccggggttcgaaccccggataccccacttattcacttt 25819269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 2052784 - 2052700
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttat 91  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||| |||||| | ||  | ||||||||  |||||||||||||||||    
T  2052784 gtccccgtgagcatagctcagttggcagggacaatgcattatcatatgcaggggccggggttcgaaccccggacaccccacttat 2052700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 1721133 - 1721244
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    |||||| || |||||||||||||||  ||  ||||||||| |||||||| | ||  | | ||||||  ||||||||| ||||||||||| || |||| ||    
T  1721133 tgtccctgtgagcatagctcagttggtaggaacatgcattgttatatgcaggggccgggtttcgaaccccggacacctcacttattcaccttaaaaaagg 1721232  T
Q  107 taaattctagcc 118  Q
    | ||||||||||    
T  1721233 tgaattctagcc 1721244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 9527419 - 9527506
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    |||||||| ||||||||||||||| ||| ||| ||||||| |||||||| | ||| | |||| |||  | ||||||||||||||||||    
T  9527419 gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggtcggggtttgaaccctggacaccccacttattca 9527506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 19866535 - 19866582
Alignment:
Q  74 tccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||||||||||||||| || |||| ||| |||||||||||||    
T  19866535 tccggacaccccacttattcaccttaaaaaaggtgaattctagccact 19866582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 28417370 - 28417315
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaa 72  Q
    |||||| |||||||| |||||||||||||| |||||||| |||||  |||||||||    
T  28417370 agcataactcagttggcagagacatgcattcttatatgcagaggtcaaggttcgaa 28417315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 34698100 - 34698135
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatg 54  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34698100 catagctcagttgacagggacatgcattattatatg 34698135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 4605934 - 4605896
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgc 55  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  4605934 agcataactcagttgacagagacatgcattgttatatgc 4605896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 41182835 - 41182876
Alignment:
Q  75 ccggacaccccacttattcactttgaaaatggtaaattctagc 117  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  41182835 ccggacaccccacttattcactttgaaaa-ggtgaattctagc 41182876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 17954947 - 17954870
Alignment:
Q  22 agctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||| ||| |||| |||||| |||||||| | | | | ||||||||  ||||||||||||||||||||||||    
T  17954947 agctcagttggcagggacaatgcattgttatatgcagggatcgtggttcgaataccggacaccccacttattcacttt 17954870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 28284041 - 28284008
Alignment:
Q  18 gcatagctcagttgacagagacatgcattattat 51  Q
    |||||||||||||| |||||||||||||||||||    
T  28284041 gcatagctcagttggcagagacatgcattattat 28284008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 42831944 - 42832028
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacat-gcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || ||||| |||||||||||||| | || || ||||| ||  |||||||||||||||||||||    
T  42831944 cccgtgagcatagctcagttggtag-gacattgcattattatatgcaggggctggggttcaaaccccggacaccccacttattcac 42832028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 47141901 - 47141860
Alignment:
Q  14 gtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    ||||||||| |||||||||||| |||||||||| ||||||||    
T  47141901 gtaagcataactcagttgacagggacatgcattgttatatgc 47141860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 48565180 - 48565135
Alignment:
Q  76 cggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||||||||||| |||||||||| ||| |||||||| ||||    
T  48565180 cggacaccccacttatttactttgaaaaaggtgaattctagacact 48565135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 4611274 - 4611218
Alignment:
Q  66 gttcgaaatccggacaccccacttattcactttgaa-aatggtaaattctagccact 121  Q
    ||||||| ||||||||||||||||||| || ||||| || ||| |||||||||||||    
T  4611274 gttcgaactccggacaccccacttatttaccttgaataaaggtgaattctagccact 4611218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 19536713 - 19536796
Alignment:
Q  10 ccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    ||||||||||||||||||||||  || ||||||||||  ||||||  | || || |||||| || ||||||| ||||||||||||    
T  19536713 ccccgtaagcatagctcagttggtagggacatgcattgctatatgtaggggctggggttcg-aacccggacatcccacttattca 19536796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 19976655 - 19976563
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||| |||| || ||  |||||||| | ||  | ||||||||  ||||||||||||| ||||||||||    
T  19976655 tgtccccgtgagcatagctcagttggcagggacaatgtatggttatatgcaggggccggggttcgaaccccggacaccccacatattcacttt 19976563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 26350068 - 26349993
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||| || || |||||||||| |||||||||||| | ||||| ||||||||  ||  |||||||||||||||||    
T  26350068 catagcttagatggcagagacatgtattattatatgcaggggttg-ggttcgaaccccaaacaccccacttattcac 26349993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 35424151 - 35424247
Alignment:
Q  25 tcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||| || | ||||||||| ||||||||   || |||| ||||||  ||||| |||||| |||||||| ||||||| | | |||||||||||||    
T  35424151 tcagttgccaaaaacatgcattgttatatgcatgggctgagattcgaaccccggataccccatttattcaccttgaaaaagatgaattctagccact 35424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 35498395 - 35498504
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||| | ||||| ||||| || | |||||||||||||||||||||||||||| ||| ||    
T  35498395 cccgtaagcataactcagttggcagggacatgcattattatatgcaggggttg-ggttcaaacttcggacaccccacttattcactttgaaaaaggtgaa 35498493  T
Q  111 ttctagccact 121  Q
    |||||||||||    
T  35498494 ttctagccact 35498504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 35195835 - 35195950
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||| | ||  | ||||||||  ||| |||||||| |||||||| ||||||| |    
T  35195835 gtgtccccgtaagcatagctcagttggcagggacatgcattattatatgcaggggccggggttcgaaccccgaacaccccatttattcaccttgaaaaag 35195934  T
Q  106 gtaaattctagccact 121  Q
    || | |||||| ||||    
T  35195935 gtgacttctagtcact 35195950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 43635581 - 43635695
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| |||||| |||||||| |||| ||||||||| |||||||| | ||| | ||||||||  ||||||||||||||||||||| ||  ||| ||    
T  43635581 tgtccccgtgagcataactcagttggcagaaacatgcattgttatatgcagcggtcggggttcgaaccccggacaccccacttattcaccttacaaaggg 43635680  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  43635681 tgaattctagccact 43635695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 24579382 - 24579274
Alignment:
Q  13 cgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaatt 112  Q
    |||||||||| ||||||| ||||  |||||||||||||||||| | || |||| ||||||  || |||||||||||||||||| ||||||| ||| ||||    
T  24579382 cgtaagcatatctcagtttacaggaacatgcattattatatgcaggggatgagattcgaaccccagacaccccacttattcaccttgaaaaaggtgaatt 24579283  T
Q  113 ctagccact 121  Q
    ||| |||||    
T  24579282 ctatccact 24579274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 3246583 - 3246477
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaat 111  Q
    |||| ||||||||||||||||||| |||||||||| |||||||    || ||||||||||| |||| |||||| ||||||| |||||||||| ||| |||    
T  3246583 ccgtgagcatagctcagttgacagggacatgcattgttatatgg---ggctgaggttcgaactccgaacaccctacttatttactttgaaaaaggtgaat 3246487  T
Q  112 tctagccact 121  Q
    |||| |||||    
T  3246486 tctaaccact 3246477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 10020559 - 10020457
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcc 118  Q
    ||||||||||||||||| |||||||||| |||||||| | ||||| ||||||||  ||| ||| ||||||||||||  ||||||| ||| ||||||| ||    
T  10020559 catagctcagttgacagggacatgcattgttatatgcaggggttggggttcgaaccccgaacaacccacttattcatcttgaaaaaggtgaattctaccc 10020460  T
Q  119 act 121  Q
    |||    
T  10020459 act 10020457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 1649142 - 1649259
Alignment:
Q  4 ttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||||| |||||||||||||||  || || ||||||| || ||||| | ||    ||||||||  | ||||||||||||||||||| |||||||    
T  1649142 ttgtgtccccgtgagcatagctcagttggtagggatatgcattgttttatgcaggggccagggttcgaaccctggacaccccacttattcaccttgaaaa 1649241  T
Q  104 tggtaaattctagccact 121  Q
    |||| |||||||||||||    
T  1649242 tggtgaattctagccact 1649259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 7392408 - 7392312
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||||||| ||||||||||| ||| |||  ||||||||| |||||||| ||||||| |||| |||  ||| ||||||||||||||||| |||||||    
T  7392408 tgtccccgtgagcatagctcaattggcaggaacatgcattgttatatgcagaggttggggtttgaaccccgaacaccccacttattcaccttgaaaa 7392312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 7465463 - 7465542
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccactta 90  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| | ||  | ||||||||  ||||||||||||||||    
T  7465463 cccgtgagcatagctcagttggcagagacatgcattattatatgcaggggccggggttcgaaccccggacaccccactta 7465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 31475946 - 31475851
Alignment:
Q  4 ttgtgtccccgtaagcatagctcagttgacagagacat-gcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||| ||||| ||||||||||||||| ||| ||||| |||||||||||||| | || || ||||||||  || |||||||||||||||||||||    
T  31475946 ttgtgttcccgtgagcatagctcagttggcagggacattgcattattatatgcaggggctggggttcgaacccctgacaccccacttattcacttt 31475851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 34693860 - 34693758
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||| |||| ||||||| ||||||||| ||||||||| | |||||| ||||||| | | |||| ||||||||||||| ||||||  ||| ||||||||    
T  34693860 agcataactcacttgacagggacatgcataattatatgcaggggttgaagttcgaatttcagacatcccacttattcaccttgaaa--ggtgaattctag 34693763  T
Q  117 ccact 121  Q
    |||||    
T  34693762 ccact 34693758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 1513498 - 1513578
Alignment:
Q  25 tcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    ||||||| ||| |||||||||| |||||||  | ||||||||||||||  ||| ||||||||||||||||| |||||||||    
T  1513498 tcagttggcagggacatgcattgttatatgtaggggttgaggttcgaacaccgaacaccccacttattcaccttgaaaatg 1513578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 24304386 - 24304294
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||||||||||||| | |||||||  ||| ||||||||||||||| | ||| | |||||||| |||| |||||||| |||||||||||    
T  24304386 tgtccccgtaagcatagcttaattgacaggaacaatgcattattatatgcaggggtcggggttcgaactccgaacaccccatttattcacttt 24304294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 14818468 - 14818352
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||| | ||||| ||  ||  |||||||||||||||||||| ||| ||    
T  14818468 tgtccccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttattcactttaaaagtg 14818369  T
Q  106 gtaaattctagccacttga 124  Q
      || ||||||||||||||    
T  14818368 --aatttctagccacttga 14818352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 15265466 - 15265350
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||| | ||||| ||  ||  |||||||||||||||||||| ||| ||    
T  15265466 tgtccccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttattcactttaaaagtg 15265367  T
Q  106 gtaaattctagccacttga 124  Q
      || ||||||||||||||    
T  15265366 --aatttctagccacttga 15265350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 41139080 - 41139171
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||| | ||||||||  ||||||||  ||||||||||||||    
T  41139080 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaatcccggacacttcacttattcacttt 41139171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 32814825 - 32814907
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    |||| |||||||||||||||  || ||||||||||||||||||| | ||| |  |||||||  ||||||||||||||||||||    
T  32814825 ccgtgagcatagctcagttggtagggacatgcattattatatgcaggggtcggagttcgaatcccggacaccccacttattca 32814907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 19126728 - 19126821
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||||  ||||||||||||||  ||  ||| ||||||||||||| | | || |||||||||||  ||||||||||||||||||||||||    
T  19126728 gtgtccccgtcggcatagctcagttggtaggaacaatgcattattatatacaggggctgaggttcgaaccccggacaccccacttattcacttt 19126821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 37410578 - 37410469
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaat 111  Q
    |||| |||||||||||||||  |  |||||||||| |||||||| | |||  ||||||||| |||||||||| ||||||||| | || |||| ||  |||    
T  37410578 ccgtgagcatagctcagttggtaaggacatgcattgttatatgcaggggtcaaggttcgaactccggacacctcacttattctccttaaaaagggagaat 37410479  T
Q  112 tctagccact 121  Q
    ||||||||||    
T  37410478 tctagccact 37410469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 21285455 - 21285367
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||| ||||||||||||||| ||| |||| |||||| |||||||| | ||  | ||||||||  |||||||||||||||||||||    
T  21285455 gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcac 21285367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 33236347 - 33236255
Alignment:
Q  29 ttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||||||| |||| |||||||| | ||||| ||||||||   | ||||||| ||||||||||||| ||||| || ||||||| |||||    
T  33236347 ttgacagagacatacattgttatatgcaggggttggggttcgaacaacagacaccctacttattcactttaaaaattgtgaattctaaccact 33236255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 38451856 - 38451944
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| || ||||||||||||||||||| |||| |||||| |||||||| | ||  | ||||||||  |||||||||||||||||||||    
T  38451856 gtccctgtgagcatagctcagttgacagggacaatgcattgttatatgcaggggccggggttcgaatcccggacaccccacttattcac 38451944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 41417378 - 41417286
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| |||  ||| ||||| ||||||||| | ||| | ||||||||  || |||||||||||||||||||||    
T  41417378 tgtccccgtgagcatagctcagttggcaggaacagtgcatcattatatgcaggggtcggggttcgaaccccagacaccccacttattcacttt 41417286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 44409204 - 44409307
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||| |||||||  ||| |||||||||||||||||||   ||| | ||||||||  ||| ||||||||||||||||| ||||||| ||| |||||||     
T  44409204 agcataactcagttagcagggacatgcattattatatgcaagggtcggggttcgaac-ccgaacaccccacttattcaccttgaaaaaggtgaattctaa 44409302  T
Q  117 ccact 121  Q
    |||||    
T  44409303 ccact 44409307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 23799310 - 23799401
Alignment:
Q  24 ctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattcta 115  Q
    |||||||| |||||||||||||| |||||||| | ||| | | ||||||   |||||||||||||||||| |||| |||| ||| |||||||    
T  23799310 ctcagttggcagagacatgcattgttatatgcaggggtcgggattcgaacctcggacaccccacttattctctttaaaaaaggttaattcta 23799401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 37917386 - 37917481
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||| |||||||||||||||  ||  |||||||| ||||||||| | ||||| ||||| ||  |   |||||||||||||||||||||||||    
T  37917386 gtccccgtgagcatagctcagttggtaggaacatgcataattatatgcaggggttggggttcaaaccctaaacaccccacttattcactttgaaaa 37917481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 8766913 - 8766822
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttga 100  Q
    ||||||||| |||||| |||||||| ||| ||||| |||| | |||||| | |||||| |||||||  ||||||  ||||||||||||||||||    
T  8766913 tgtccccgtgagcataactcagttggcagggacattcattgtcatatgcaggggttgaagttcgaacaccggac--cccacttattcactttga 8766822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 39524713 - 39524794
Alignment:
Q  39 catgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||| |||||||| | |||||||||||| |||||| ||||| || ||||| |||||||||| ||| ||||||| |||||    
T  39524713 catgcattgttatatgcaggggttgaggttcg-aatccgaacacctcatttatttactttgaaaaaggtgaattctatccact 39524794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 27726470 - 27726357
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| | ||||||||||||| ||| |||||||||||||||| || | ||  | ||||||||   |||||||||  ||||||| ||||| ||| |||    
T  27726470 gtccccgtgaacatagctcagttggcagggacatgcattattataagcagtggccggggttcgaacctcggacaccctgcttattcgctttggaaaaggt 27726371  T
Q  108 aaattctagccact 121  Q
     ||||||| |||||    
T  27726370 gaattctaaccact 27726357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 29658375 - 29658286
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||| ||||||||||| ||| ||| |||| |||||| |||||||| | ||  | ||||||||  |||||||||||||||||||||    
T  29658375 tgtccccgtgagcatagctcaattggcagcgacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcac 29658286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 11808035 - 11808119
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| ||| ||||||| |||  || |||||||||| |||||||| | ||| | ||||||||  |||||||||||||||||||||    
T  11808035 cccgtgagcttagctcaattggtagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcac 11808119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 16814702 - 16814786
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||||||||||| ||   |||||||||||||||||  | ||| | ||||||||  || ||||| ||||||||||||||||||||    
T  16814702 catagctcagttggcaagaacatgcattattatatgtaggggtcggggttcgaaccccagacactccacttattcactttgaaaa 16814786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 24427367 - 24427451
Alignment:
Q  18 gcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaa 102  Q
    ||||| |||||||| |||||||||||||| |||||||| | |||  |||||||||  ||| | |||||| |||||||| ||||||    
T  24427367 gcataactcagttggcagagacatgcattgttatatgcaggggtcaaggttcgaaccccgaataccccatttattcaccttgaaa 24427451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 45268028 - 45267980
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    ||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  45268028 tgtccccgtgagcatagctcagttggcagagacatatattattatatgc 45267980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 10958031 - 10958140
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    |||| ||||| ||||||||||| ||| ||| |||||||| |||||| |||  |||    ||||||||  ||||||||||||||||||||| |  |||| |    
T  10958031 gtgttcccgtgagcatagctcaattggcagggacatgcactattatgtgc--agg----ggttcgaaccccggacaccccacttattcacctcaaaaaag 10958124  T
Q  106 gtaaattctagccact 121  Q
    || |||||||||||||    
T  10958125 gtgaattctagccact 10958140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 22706093 - 22706042
Alignment:
Q  44 attattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||| | || |||||||| || ||||||||||||||||||||||    
T  22706093 attattatatgcaggggctgaggttcaaactccggacaccccacttattcac 22706042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 121
Target Start/End: Complemental strand, 26734302 - 26734259
Alignment:
Q  78 gacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||    
T  26734302 gacaccccacttattcaccttgaaaaaggtgaattctagccact 26734259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 32514737 - 32514690
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    |||||||| ||||||| ||||||| |||||||||| ||||||||||||    
T  32514737 gtccccgtgagcatagttcagttggcagagacatgtattattatatgc 32514690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 7908732 - 7908790
Alignment:
Q  37 gacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||||||||||||| |||| |||||||||||  ||  |||||| ||||||||||    
T  7908732 gacatgcattattatatgcagaggctgaggttcgaaccccaaacaccctacttattcac 7908790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 31694096 - 31694154
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||||||||| | ||  ||| |||||| ||||||||||||||||||| |||||    
T  31694096 atgcattattatatgcaggggacgagattcgaactccggacaccccacttatttacttt 31694154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 10474615 - 10474526
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||| ||| ||||||| |||||||  |||||||| |||| |||||||| | ||| | |||||||   ||||||||| |||||||||||    
T  10474615 gtgtcctcgtgagcatagttcagttggtagagacatacattgttatatgcaggggtcggggttcgacccccggacacctcacttattcac 10474526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 13905971 - 13906044
Alignment:
Q  48 ttatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||| | |||||| ||||||| |||| |||||||||||||| ||||| |||| | | ||||||| |||||    
T  13905971 ttatatgcaggggttgatgttcgaactccgaacaccccacttatttactttaaaaaagttgaattctaaccact 13906044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 34948103 - 34948187
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| |||||||| |||||| | ||  ||||||||||  |||||||||||||||||||||    
T  34948103 cccgtgagcatagctcagttggtag-gacaatgcattatcatatgcagtggccgaggttcgaaccccggacaccccacttattcac 34948187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 42887183 - 42887232
Alignment:
Q  43 cattattatatgctgaggttgaggttcgaaatccggacaccccacttatt 92  Q
    ||||||||||||| | || |||||||||||  ||||||||||||||||||    
T  42887183 cattattatatgcaggggctgaggttcgaaccccggacaccccacttatt 42887232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 6820831 - 6820867
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgca 44  Q
    |||||||| |||||| |||||||||||||||||||||    
T  6820831 gtccccgtgagcataactcagttgacagagacatgca 6820867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 17305492 - 17305444
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    |||| |||| ||||||||||||||| ||| |||||||||| ||||||||    
T  17305492 tgtctccgtgagcatagctcagttggcagggacatgcattgttatatgc 17305444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 26560015 - 26560063
Alignment:
Q  20 atagctcagttgacagagacatgcattattatatgctgaggttgaggtt 68  Q
    ||||||||||||||| |||||| ||||||||||||  ||||||| ||||    
T  26560015 atagctcagttgacaaagacatacattattatatgtagaggttggggtt 26560063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 42976646 - 42976594
Alignment:
Q  63 gaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattcta 115  Q
    |||||||||| | ||||||| ||||||||||||||| |||| ||| |||||||    
T  42976646 gaggttcgaactacggacactccacttattcactttaaaaaaggtgaattcta 42976594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 34107268 - 34107381
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| ||||||||||||||| ||| |||||| || ||||||||| | |||||||||||||| ||| |||||||||||||||||| |||||||  ||    
T  34107268 gtccccgtgagcatagctcagttggcagggacatgtataattatatgcaggggttgaggttcgaactccagacaccccacttattcaccttgaaaaatgt 34107367  T
Q  108 aaattctagccact 121  Q
     |||||||||||||    
T  34107368 gaattctagccact 34107381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 39334979 - 39334869
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| |||||| |||||||| ||| ||||||||||||||||| | | || || |||||||| ||| |||| ||||||||||||||||||||| ||| ||    
T  39334979 cccgtgagcataactcagttggcagggacatgcattattatatacaggggctggggttcgaactccagacatcccacttattcactttgaaaaaggtgaa 39334880  T
Q  111 ttctagccact 121  Q
    |||||||||||    
T  39334879 ttctagccact 39334869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 22355076 - 22355189
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| ||||||||||||||| ||  |||||||||| |||| ||| | ||||||| |||||| ||| |||||||||||||||||| ||| ||| ||    
T  22355076 tgtccccgtgagcatagctcagttggcaaggacatgcattgttatgtgcaggggttgagtttcgaactccagacaccccacttattcaccttgcaaaagg 22355175  T
Q  107 taaattctagccac 120  Q
    | ||||||||||||    
T  22355176 tgaattctagccac 22355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 41305167 - 41305054
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||| | ||||||||||||||| ||||| |||| |||| ||||||| | || |||||||| || |||||| ||||||||||||||| ||||||| |||    
T  41305167 gtccccatgagcatagctcagttggcagaggcatgtattagtatatgcaggggctgaggttcaaactccggataccccacttattcaccttgaaaaaggt 41305068  T
Q  108 aaattctagccact 121  Q
     ||||| |||||||    
T  41305067 gaattcgagccact 41305054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 1244562 - 1244676
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||| ||| ||||||| ||||||| ||| ||||| ||||  ||||||| | ||| | ||||||||  ||||||||||||||||||||| ||||||| ||    
T  1244562 tgtcctcgtgagcatagttcagttggcagggacatacattgctatatgcaggggtgggggttcgaaccccggacaccccacttattcaccttgaaaaagg 1244661  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  1244662 tgaattctagccact 1244676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 14307796 - 14307682
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    |||| |||| ||||| |||||||||  || |||||||||| |||||||| | ||| ||||||||||  ||| |||||||||||||||||||| ||||  |    
T  14307796 tgtctccgtgagcatggctcagttggtagggacatgcattgttatatgcaggggtcgaggttcgaaccccgaacaccccacttattcactttaaaaaaag 14307697  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  14307696 tgaattctagccact 14307682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 4529839 - 4529755
Alignment:
Q  33 cagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagc 117  Q
    ||||||||||||||||||||||| | ||| |  ||||||| |||| ||||||||||||||||||||||||| ||| |||| ||||    
T  4529839 cagagacatgcattattatatgcaggggtcggagttcgaactccgaacaccccacttattcactttgaaaaaggtgaattttagc 4529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 11001825 - 11001750
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttatt 92  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||| | | |||||| | ||||||||| |||||||    
T  11001825 agcataggtcagttgacagagacatgcattattatatgcagaggtcgggattcgaacttcggacacccaacttatt 11001750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 32288373 - 32288480
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||  | | | | ||||||||   |||||||||||||||||||| |||||||   ||||    
T  32288373 cccgtgagcgtagctcagttgacagaaacatgcattattatatgtagggatcggggttcgaacctcggacaccccacttattcaccttgaaaaaaataaa 32288472  T
Q  111 ttctagcc 118  Q
    ||||||||    
T  32288473 ttctagcc 32288480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 21970543 - 21970450
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||| ||||||||||||||||||| ||| |||||||||||||||| | | | | ||||||||  ||||| ||||| ||||||||||||    
T  21970543 gtgtccccgtgagcatagctcagttgacagggacaatgcattattatatgcagggatcggggttcgaaccccggataccccgcttattcacttt 21970450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 29034968 - 29035060
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||| ||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  29034968 tgtccccgtgagcatagctcacttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 29035060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 37123208 - 37123288
Alignment:
Q  36 agacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||||||||||||||||| | ||| ||| |||||| ||||||||||| ||||||||||||| |||| | | ||||||||    
T  37123208 agacatgcattattatatgcaggggtcgagattcgaactccggacaccctacttattcactttaaaaaagatgaattctag 37123288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 11133066 - 11133157
Alignment:
Q  5 tgtgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||||| |||||||||||||||  || |||| |||||| |||||||| | ||| | ||||||||  |||||||||||||||||||||    
T  11133066 tgtgtccccgtgagcatagctcagttggtagggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcac 11133157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 44132652 - 44132569
Alignment:
Q  20 atagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||||| |||||||||||||| |||||||| ||||| | |||||||| ||| ||||||||  |||||||  |||||||    
T  44132652 atagctcagttggcagagacatgcattgttatatgcagaggtcggggttcgaactccagacaccccgtttattcatcttgaaaa 44132569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 10602019 - 10602113
Alignment:
Q  28 gttgacagagacatgcattattatatgctgaggttgaggttcgaaatc-cggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||| |||||||||||||| |||||||| | ||  | ||||||||  | |||||||||||||||||||||||||||| | | |||||||||||||    
T  10602019 gttggcagagacatgcattgttatatgcaggggacggggttcgaacccacggacaccccacttattcactttgaaaaagatgaattctagccact 10602113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 18065257 - 18065343
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||||||||  |||| |||||||| |||||||| | ||||||||||||||  ||| |||||  |||||||||| |||||||    
T  18065257 agcatagctcagttggtagaggcatgcattgttatatgcaggggttgaggttcgaaccccgaacaccttacttattcaccttgaaaa 18065343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 22014760 - 22014658
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgct-----gaggttgaggttcgaaatccggacaccccacttattcactttga 100  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||||||  |     | ||||||||||||||  || ||||||||||||||| || ||||    
T  22014760 gtgtctccgtgagcatagttcagttgacagagacatgcattattatattatatgtaggggttgaggttcgaaccccagacaccccacttatttaccttga 22014661  T
Q  101 aaa 103  Q
    |||    
T  22014660 aaa 22014658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 40471163 - 40471232
Alignment:
Q  24 ctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattc 93  Q
    |||||||||||| ||||||||||||||||||| | ||||| | ||||||  ||| |||||||||||||||    
T  40471163 ctcagttgacagggacatgcattattatatgcaggggttgggattcgaatcccgaacaccccacttattc 40471232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 44487868 - 44487755
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| || ||||||||||||| || |||||||||||||||||||   ||  |  |||||||  ||||||| ||||||||||||| || |||| |||    
T  44487868 gtccccgtgagtatagctcagttgatagggacatgcattattatatgcaagggccggagttcgaaccccggacatcccacttattcaccttaaaaaaggt 44487769  T
Q  108 aaattctagccact 121  Q
     ||||||| |||||    
T  44487768 gaattctaaccact 44487755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 7938188 - 7938112
Alignment:
Q  36 agacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaatt 112  Q
    |||||||||||||||||||| || || | |||||||| |   ||||| |||||||||||||||||||| ||||||||    
T  7938188 agacatgcattattatatgcagaagtcggggttcgaactaacgacactccacttattcactttgaaaaaggtaaatt 7938112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 12206502 - 12206605
Alignment:
Q  18 gcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagc 117  Q
    |||||||| ||||| |||  |||| ||||||||||| | | ||| | ||||||||  ||| ||||||| ||||||||| ||||||| ||| |||||||||    
T  12206502 gcatagcttagttggcaggaacatacattattatattcaggggtcggggttcgaaccccgaacaccccgcttattcaccttgaaaaaggtgaattctagc 12206601  T
Q  118 cact 121  Q
    ||||    
T  12206602 cact 12206605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 32943365 - 32943420
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||| |||| || |||||||| | ||||||||||||||||||||    
T  32943365 atgcattattatatgcagaggctggggttcgaatttcggacaccccacttattcac 32943420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 44240182 - 44240139
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatg 54  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  44240182 cccgtaaacatagctcagttgacagagacatacattattatatg 44240139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 21875042 - 21874960
Alignment:
Q  38 acatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccac 120  Q
    |||||||| ||||||||| | ||  |||||||||   ||||||||||||||| ||||| || |||||||| ||||||||||||    
T  21875042 acatgcataattatatgcaggggcagaggttcgatccccggacaccccactttttcaccttcaaaatggtgaattctagccac 21874960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 2057474 - 2057580
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    |||| |||| ||||||||||||||| ||| || || |||| |||||||| | ||| ||| ||||||  ||||||||||||||||||||| || |||| ||    
T  2057474 tgtcaccgtgagcatagctcagttggcagggatatacattgttatatgcag-ggtcgag-ttcgaatcccggacaccccacttattcaccttaaaaaagg 2057571  T
Q  107 taaattcta 115  Q
    | |||||||    
T  2057572 tgaattcta 2057580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19352853 - 19352913
Alignment:
Q  1 tcgttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggt 61  Q
    ||||| ||||| ||| | |||| ||||||||||||||||||||||| |||||||| |||||    
T  19352853 tcgttttgtcctcgtgaacataactcagttgacagagacatgcattgttatatgcagaggt 19352913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 26975382 - 26975287
Alignment:
Q  25 tcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||| ||| ||||||||||  ||||||| |||| || ||||||||  |||||||||| | ||||||||||| |||| ||| ||||||| |||||    
T  26975382 tcagttggcagggacatgcattgctatatgcagaggctggggttcgaaccccggacaccc-agttattcactttaaaaaaggttaattctaaccact 26975287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 32527176 - 32527088
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||| ||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  || |||| ||||||||||||||||    
T  32527176 cccgtaaacatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccagacaacccacttattcacttt 32527088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 36277803 - 36277739
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaa 72  Q
    |||||||| ||||||||||||||| ||| |||||||||| |||||||  | |||||| |||||||    
T  36277803 gtccccgtgagcatagctcagttggcagtgacatgcattgttatatgtaggggttgaagttcgaa 36277739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 2304283 - 2304374
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||| ||||||||||| ||| |||| || |||||||||||  | ||| | ||||||||  |||||||||||||||||| |||||    
T  2304283 gtccccgtgagcttagctcagttggcagggacaatgtattattatatgtaggggtcggggttcgaaccccggacaccccacttatttacttt 2304374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 9796903 - 9796977
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    ||||||||||||||  || | |||||||||||||||| | ||| | ||||||||  ||||||||||||||||||||    
T  9796903 catagctcagttgatggaca-atgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattca 9796977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 18386881 - 18386826
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||  | || || |||||||| ||||||||||||||||||||||    
T  18386881 atgcattattatatgtaggggctggggttcgaactccggacaccccacttattcac 18386826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 29664596 - 29664683
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    |||||||| ||||||||||| ||| ||| |||| |||||| |||||||| | ||| | ||||| ||  ||||||||||||||||||||    
T  29664596 gtccccgtgagcatagctcaattggcagggacaatgcattgttatatgcaggggtcggggttcaaatcccggacaccccacttattca 29664683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 44187701 - 44187788
Alignment:
Q  12 ccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||| ||||||| ||||||| ||| || | ||||||||||||||| | ||| | ||||||||  || |||||||||||||||||||||    
T  44187701 ccgtgagcatagttcagttggcagggataatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcacttt 44187788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 45314424 - 45314499
Alignment:
Q  28 gttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||||| ||||||||||| |||||||| ||||| | |||||||| | | |||| ||||||||||||  |||||||    
T  45314424 gttgacaaagacatgcattgttatatgcagaggtcggggttcgaacttcagacatcccacttattcatcttgaaaa 45314499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 16028177 - 16028119
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||||||||| | ||| | |||||||| ||| |||| ||||||||||||||||    
T  16028177 atgcattattatatgcagtggtcggggttcgaactccagacatcccacttattcacttt 16028119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 25406694 - 25406644
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattcta 115  Q
    |||||||| |||||||||||||||||||||| ||| ||| ||| |||||||    
T  25406694 ggttcgaactccggacaccccacttattcaccttggaaaaggtcaattcta 25406644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 119
Target Start/End: Original strand, 36413823 - 36413865
Alignment:
Q  77 ggacaccccacttattcactttgaaaatggtaaattctagcca 119  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||    
T  36413823 ggacaccccacttattcactttgaaaaaggtgaattttagcca 36413865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 36426925 - 36426871
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    |||||||||||||||  | ||||| |||||||| |||| ||||||||||||||||    
T  36426925 atgcattattatatgtaggggttggggttcgaactccgaacaccccacttattca 36426871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 41535215 - 41535273
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||||| || | ||| ||||||||||||  ||||| ||||||||||||||||||    
T  41535215 atgcattattaaatacagagattgaggttcgaaccccggataccccacttattcacttt 41535273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 580881 - 580797
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| | ||  | ||||||||  |||||||||||||||||||||    
T  580881 cccgtgagcatagctcagttggtag-gacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 580797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 18089727 - 18089836
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaat 111  Q
    |||| ||||||||||||||| ||||||||||||||||  ||||| | ||     |||||||  || |||||| ||||||||||| |||||||  || |||    
T  18089727 ccgtgagcatagctcagttggcagagacatgcattatactatgcaggggccagagttcgaaccccagacacctcacttattcaccttgaaaaacgtgaat 18089826  T
Q  112 tctagccact 121  Q
    ||||| ||||    
T  18089827 tctagtcact 18089836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 30474293 - 30474209
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| | ||  ||||||||||  || ||||||||||||||||||    
T  30474293 cccgtgagcatagctcagttggtag-gacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcac 30474209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 34644577 - 34644540
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatg 54  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  34644577 agcatagctcagttgacagagatatgcattgttatatg 34644540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 42507349 - 42507390
Alignment:
Q  75 ccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||||||||||||||||| |||||||| ||| ||||||||    
T  42507349 ccggacaccccacttattcattttgaaaaaggtgaattctag 42507390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 1962858 - 1962906
Alignment:
Q  46 tattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    |||| ||||| | ||| |||||||||| |||||||||||||||||||||    
T  1962858 tattgtatgcaggggtcgaggttcgaactccggacaccccacttattca 1962906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 3037724 - 3037636
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||| |||||||||| |||||||| | | |||| |||||| |||||||| | ||  | ||||||||  |||||||||||||||||||||    
T  3037724 gtcctcgtaagcataactcagttggctgggacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcac 3037636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 3179321 - 3179405
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||| ||||||||  |||   |||||||||||||||| | ||| ||||||||||   | ||||||||||||||||||    
T  3179321 cccgtgagcataactcagttggtagaacaatgcattattatatgcaggggtcgaggttcgaacctcagacaccccacttattcac 3179405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 5029192 - 5029088
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||||||||||||  ||  | |||||||||||||||| ||||  |  |||||||   || ||||||||||||||||| ||||||| | | |||||||     
T  5029192 agcatagctcagttggtaggtatatgcattattatatgcagaggccggagttcgaatctcgaacaccccacttattcaccttgaaaaagatgaattctac 5029093  T
Q  117 ccact 121  Q
    |||||    
T  5029092 ccact 5029088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 32944059 - 32944103
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    ||||||| ||||||||||||| ||  |||||||||||||||||||    
T  32944059 cccgtaaacatagctcagttggcatggacatgcattattatatgc 32944103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 34830584 - 34830691
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| || |||||||| |||  ||||| ||||||| |||||||| | ||  | |||||||| ||||||||||||| |||||| | |||||||  | |||    
T  34830584 cccgtgagtatagctcacttggtagagatatgcattgttatatgcag-ggccggggttcgaactccggacaccccatttattctccttgaaaaatgaaaa 34830682  T
Q  111 ttctagcca 119  Q
    |||||||||    
T  34830683 ttctagcca 34830691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 38807878 - 38807970
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||| || ||| |||||||| ||| ||||||||| ||||||||| | |  |||| ||||||  || |||||| ||||||||||| |||||||    
T  38807878 cccgtgagtataactcagttggcagggacatgcataattatatgcagggaatgagattcgaaccccagacaccgcacttattcaccttgaaaa 38807970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 49039548 - 49039433
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    |||||||||| ||||||||||||||| ||| |||||||||| |||||||| | |  || ||||||||  ||||||||||||||||||||| ||||||| |    
T  49039548 gtgtccccgtgagcatagctcagttggcagggacatgcattgttatatgcagggactggggttcgaaccccggacaccccacttattcaccttgaaaaag 49039449  T
Q  106 gtaaattctagccact 121  Q
    || |||||||||||||    
T  49039448 gtgaattctagccact 49039433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 33359810 - 33359924
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| ||||||||||||||||||  ||||| |||| ||||||||   ||| ||||||||||  | ||||||||||||||||||| ||||||| ||    
T  33359810 tgtccccgtgagcatagctcagttgacatggacattcattgttatatgcaagggtcgaggttcgaaccctggacaccccacttattcaccttgaaaaagg 33359909  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  33359910 tgaattctagccact 33359924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 54854282 - 54854167
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    |||||||||| ||||||||||||||| ||| ||||||||| ||||||||| | || || ||||||||  ||||||| | ||||||||||| |||||||      
T  54854282 gtgtccccgtgagcatagctcagttggcagggacatgcataattatatgcaggggctggggttcgaaccccggacatcacacttattcaccttgaaaaaa 54854183  T
Q  106 gtaaattctagccact 121  Q
    || |||||||||||||    
T  54854182 gtgaattctagccact 54854167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 41492600 - 41492487
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||||||| | ||  | |||||| || | |||||||||||||||| || ||||||| ||    
T  41492600 tgtccccgtgagcatagctcagttggcagggacatgcattattatatgcaggggccggggttcg-aacctggacaccccacttatttaccttgaaaaagg 41492502  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  41492501 tgaattctagccact 41492487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 20610742 - 20610846
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    ||||||||||||||| ||| |||||||||| |||||||| | ||  | |||||||| |||||||| ||||||||||||| || |||| ||| ||||||||    
T  20610742 agcatagctcagttggcagggacatgcattgttatatgcaggggccggggttcgaactccggacatcccacttattcaccttaaaaaaggtgaattctag 20610841  T
Q  117 ccact 121  Q
    |||||    
T  20610842 ccact 20610846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 36045823 - 36045935
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    |||||| || ||||||||||| ||||||| |||||||||| |||||||| | ||||||| |||||| |||||||||| |||||| |||  ||||||| ||    
T  36045823 tgtcccagtgagcatagctcaattgacagggacatgcattgttatatgcaggggttgagattcgaactccggacacctcacttagtcatattgaaaaagg 36045922  T
Q  107 taaattctagcca 119  Q
    | |||||| ||||    
T  36045923 tgaattctggcca 36045935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 53815688 - 53815778
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcact 96  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | || || ||||||||  ||||||||||||||||||||||    
T  53815688 tgtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcact 53815778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 28520833 - 28520742
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  28520833 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 28520742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 49319387 - 49319482
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||| ||| ||||||||||||||| ||  ||||||||||||||||||| | ||| | ||||| ||  ||||||||||||||||||||| |||||||    
T  49319387 gtcctcgtgagcatagctcagttggcatggacatgcattattatatgcaggggtcggggttccaaccccggacaccccacttattcaccttgaaaa 49319482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 21023441 - 21023340
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcc 118  Q
    ||||||||||||| |||| ||||||||| |||||| | | ||||| ||||||||  || |||||||||||||||||| ||||||| ||| ||||||| ||    
T  21023441 catagctcagttggcagaaacatgcattgttatatccgg-ggttggggttcgaacccccgacaccccacttattcaccttgaaaaaggtgaattctaacc 21023343  T
Q  119 act 121  Q
    |||    
T  21023342 act 21023340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 36257688 - 36257799
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| ||||||||||||||| ||| |||| ||| |||| ||||| | ||  | ||||||||  |||||||||||||||||||||||| ||||  ||    
T  36257688 gtccccgtgagcatagctcagttggcagggacaagcagtattgtatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaaa--gt 36257785  T
Q  108 aaattctagccact 121  Q
     |||||||||||||    
T  36257786 gaattctagccact 36257799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 47416498 - 47416575
Alignment:
Q  44 attattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||||| | ||||| ||||||||   |||||||||||||||||||||||||||| ||| ||||||| |||||    
T  47416498 attattatatgcaggggttggggttcgaatctcggacaccccacttattcactttgaaaaaggtgaattctaaccact 47416575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 9692954 - 9693046
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||| || | ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  9692954 tgtccccgtgagcatagctcagttggcagggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 9693046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 14149785 - 14149877
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| | ||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  14149785 tgtccccgtgaccatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 14149877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 42411556 - 42411460
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||| ||||||||||||||| ||| |||| ||||| ||||||||| | ||| | ||||||||  |||||||||||||||||| ||||| ||||    
T  42411556 gtccccgtgagcatagctcagttggcagggacaatgcataattatatgcaggggtcggggttcgaaccccggacaccccacttatttactttaaaaa 42411460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 8690207 - 8690298
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||| ||| ||||||||||||||| ||  |||| ||||||||||||||| | ||| | ||||||||  ||||||||||||||||||||||||    
T  8690207 gtcctcgtgagcatagctcagttggcaaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttt 8690298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 48968312 - 48968221
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||||||| ||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  48968312 gtccccgtgagcatagttcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 48968221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 34773752 - 34773694
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||||||||| | || |||||||||||  ||||||||||||||||||||||||    
T  34773752 atgcattattatatgcaggggctgaggttcgaaccccggacaccccacttattcacttt 34773694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 6481668 - 6481572
Alignment:
Q  25 tcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||| ||| ||||||||| ||||||||| ||||  ||||||||||   | ||| |||||||||||||| || |||||||| |||||||| ||||    
T  6481668 tcagttggcagggacatgcatgattatatgcagaggccgaggttcgaacctcagacgccccacttattcaccttaaaaatggtgaattctagtcact 6481572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 12820507 - 12820419
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||| ||||||||||||||| ||||||| ||||||| |||||||| | ||| | |||| |||  | |||||||||||||||||||    
T  12820507 gtccccgtgagcatagctcagttggcagagacaatgcattgttatatgcaggggtcggggttagaaccctggacaccccacttattcac 12820419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 24039891 - 24039989
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    ||||||||||||||||||| |||||||||| |||||||    ||| | ||||||||  ||| ||||| ||||||||||| ||||||| ||| ||||||||    
T  24039891 agcatagctcagttgacag-gacatgcattgttatatgg---ggtcggggttcgaaccccgaacacctcacttattcaccttgaaaaaggtgaattctag 24039986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 29785143 - 29785239
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||||||| ||||||||||||||| ||| ||||| || | | |||||  | || || ||||||||  ||||||||||||||||||||| |||||||    
T  29785143 tgtccccgtgagcatagctcagttggcagggacatacactgtaatatgtaggggctggggttcgaaccccggacaccccacttattcaccttgaaaa 29785239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 15640545 - 15640454
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| |||||| |||||||| |||||||| ||||||||||||||| | | | | ||||||||   | |||||||||||||||||||||    
T  15640545 gtccccgtgagcatatctcagttggcagagacaatgcattattatatgcagtgttcggggttcgaacctcagacaccccacttattcacttt 15640454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 20166310 - 20166405
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||| ||| ||||||||||| ||| |||||||||| |||||||| | ||  ||||||||||  || || ||||||||||||| | |||||||    
T  20166310 gtccccgtgagcgtagctcagttggcagggacatgcattgttatatgcaggggccgaggttcgaaccccagataccccacttattctccttgaaaa 20166405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 7768854 - 7768792
Alignment:
Q  43 cattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    ||||||||||||| ||||  | ||||||||  |||||||||||||||||||||||| ||||||    
T  7768854 cattattatatgcagaggccggggttcgaaccccggacaccccacttattcactttaaaaatg 7768792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 8241474 - 8241400
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacac 82  Q
    |||||||| |||||| |||||||| |||  |||||||||||||||||| || |||| ||||||||  ||||||||    
T  8241474 gtccccgttagcataactcagttgtcaggaacatgcattattatatgcagacgttggggttcgaaccccggacac 8241400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 2565254 - 2565339
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttatt 92  Q
    |||||||| ||||||||||||||||||| ||| ||||||| |||||||| | ||| |  |||||||  ||| ||||||||||||||    
T  2565254 gtccccgtgagcatagctcagttgacagggacaatgcattgttatatgcaggggtcggagttcgaatcccgaacaccccacttatt 2565339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 32887136 - 32887209
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttatt 92  Q
    ||||||||||||||||| ||| | |||| |||||||| |  || | |||||||| |||||||||||||||||||    
T  32887136 catagctcagttgacagggacgtacatttttatatgccggagtcgtggttcgaactccggacaccccacttatt 32887209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 33076529 - 33076611
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||   | ||||||||||||||||||| | ||| | ||||||||  |||||||||| ||||||||||    
T  33076529 cccgtgagcatagctcagttgg--gggacatgcattattatatgcaggggtcggggttcgaaccccggacaccctacttattcac 33076611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 36954132 - 36954221
Alignment:
Q  11 cccgtaagcatagctca-gttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||| ||||||||||| |||| ||| |||| ||||||||||||||| | ||| | ||||||||  |||||||||||| |||||||||||    
T  36954132 cccgtgagcatagctcaagttggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccatttattcacttt 36954221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 45350273 - 45350357
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| ||||| |  |||||||  |||||||||||||||||||||    
T  45350273 cccgtcagcatagctcagttggtag-gacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttattcac 45350357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 45359752 - 45359836
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| ||||| |  |||||||  |||||||||||||||||||||    
T  45359752 cccgtcagcatagctcagttggtag-gacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttattcac 45359836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 48512191 - 48512280
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||| ||||||||||||||| ||| ||| ||||||| |||||||| | || |  |||||| |  |||||||||||||||||||||    
T  48512191 tgtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggctagggttcgtaccccggacaccccacttattcac 48512280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 18497415 - 18497471
Alignment:
Q  37 gacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattc 93  Q
    |||||||||| |||||||| | ||||| |||||||| |||||||| |||||||||||    
T  18497415 gacatgcattgttatatgcaggggttggggttcgaactccggacatcccacttattc 18497471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 21476179 - 21476096
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacat-gcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    ||||| |||||||||||||||| || || || |||||||||||||| | ||| || ||||||| |||||||| ||||||||||||    
T  21476179 cccgtgagcatagctcagttgatag-gatattgcattattatatgcaggggtcgatgttcgaactccggacatcccacttattca 21476096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 30615990 - 30616089
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggtt--gaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||||||| ||||||||||| ||||||  |||| |||||| |||||||| | ||||  | |||||||   |||||||||||||||||||||||| ||||    
T  30615990 tgtccccgtgagcatagctcaattgacatggacaatgcattgttatatgcaggggttagggggttcgagccccggacaccccacttattcactttaaaaa 30616089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 36008268 - 36008356
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||| ||||||||||||||| ||| ||| ||||||| |||||||| | ||  | ||||||||  ||| |||||||||||||||||    
T  36008268 gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaaccccgaacaccccacttattcac 36008356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 37728932 - 37729012
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccac 87  Q
    |||||| || ||||||| |||||||  || || |||||||||||||||| | ||| |||||||||| ||||||||| ||||    
T  37728932 tgtccctgtgagcatagttcagttggtagggatatgcattattatatgcaggggtcgaggttcgaactccggacactccac 37729012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 49743353 - 49743469
Alignment:
Q  5 tgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaat 104  Q
    ||||||||||  ||||||| ||||||| ||| || |||||||||||||||| | ||  | | ||||||  ||||||||| |||||||| || |||||||     
T  49743353 tgtgtccccgcgagcatagttcagttggcagggatatgcattattatatgcaggggccgggattcgaaccccggacacctcacttatttaccttgaaaaa 49743452  T
Q  105 ggtaaattctagccact 121  Q
    ||| |||| || |||||    
T  49743453 ggtgaattttaaccact 49743469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 34106597 - 34106683
Alignment:
Q  10 ccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcact 96  Q
    |||||| ||||||||||||||| |||  || |||||||||||||||| ||||| | ||||||||  || |||||||||||||| ||||    
T  34106597 ccccgtgagcatagctcagttggcaggaacaatgcattattatatgcagaggtcg-ggttcgaaccccagacaccccacttatccact 34106683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 34370917 - 34371012
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||| ||| ||||| || ||||||||||||||||||| || ||||| | ||| |||||| ||| | ||  |||||||||||||| | |||||||    
T  34370917 gtccccataaacatagttcggttgacagagacatgcattgttgtatgcaggggtcgaggtttgaatttcgatcaccccacttattctccttgaaaa 34371012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 35747547 - 35747496
Alignment:
Q  44 attattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||| ||||| | ||| |||||||||| ||||||||||||||||||||||    
T  35747547 attattttatgcaggggtcgaggttcgaactccggacaccccacttattcac 35747496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 40150466 - 40150557
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||||||| ||||||| |||  ||| ||||||||||||| | | ||| | ||||||||  ||||||||| ||||||||||||||    
T  40150466 gtccccgtgagcatagttcagttggcaggaacaatgcattattatatacaggggtcggggttcgaaccccggacacctcacttattcacttt 40150557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 41003240 - 41003186
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||| |||||||| | ||||||| |||||| ||||||||||||||||||||||    
T  41003240 atgcattgttatatgcaggggttgag-ttcgaactccggacaccccacttattcac 41003186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 44074879 - 44074934
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||| | | |||| |||||||  |||||||||||||||||||||    
T  44074879 atgcattattatatgcagggattgaagttcgaatcccggacaccccacttattcac 44074934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 3465936 - 3465894
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggt 61  Q
    |||| ||||||||||| |||||||||||||||||||| |||||    
T  3465936 cataactcagttgacaaagacatgcattattatatgcagaggt 3465894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 15507565 - 15507651
Alignment:
Q  33 cagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcca 119  Q
    |||||| || ||||||||||||| | ||||| ||||||||  ||| |||||||||| ||| ||||||||||   | |||||||||||    
T  15507565 cagagatatacattattatatgcaggggttggggttcgaaccccgaacaccccactaatttactttgaaaaatatgaattctagcca 15507651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 23226787 - 23226693
Alignment:
Q  27 agttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||| |||||||||| |||||||| |  |||| ||||||||  ||||||| | ||||||||||| || ||||  || |||| ||||||||    
T  23226787 agttgacagggacatgcattgttatatgcaggagttggggttcgaacaccggacatctcacttattcaccttaaaaaatgtgaattatagccact 23226693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 55967639 - 55967685
Alignment:
Q  75 ccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||||||||||||| | ||||||||||| ||||||| |||||    
T  55967639 ccggacaccccacttattcgcattgaaaatggtgaattctaaccact 55967685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 18741015 - 18740922
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggaca-ccccacttattcactttgaaaa 103  Q
    |||||||||| | |||||||| |||||| |||||||||||||||| | ||| |  |||||||  ||  ||| |||||||||||||| |||||||    
T  18741015 cccgtaagcacaactcagttggcagagatatgcattattatatgcaggggtcggagttcgaaccccaaacacccccacttattcaccttgaaaa 18740922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 27921888 - 27921937
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    |||| ||||| |||||||||||||||  || |||||||||||||||||||    
T  27921888 gtgttcccgtgagcatagctcagttggtagggacatgcattattatatgc 27921937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 37997931 - 37997834
Alignment:
Q  24 ctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||| ||| ||||| |||| |||||||| | |  || ||||||||  || |||||||||||||||||| || |||| | | |||||||||||||    
T  37997931 ctcagttggcagggacattcattgttatatgcagggtctggggttcgaaccccagacaccccacttattcaccttaaaaaggatgaattctagccact 37997834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 47018044 - 47017960
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| | ||  | ||||||||  |||||||||||||||||||||    
T  47018044 cccgtgagcatagctcagttggtag-gacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 47017960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 48031976 - 48031927
Alignment:
Q  38 acatgcattattatatgctgaggttgaggttcgaaatccggacaccccac 87  Q
    |||||||||||||||||| | |||||| ||||||| | ||||||||||||    
T  48031976 acatgcattattatatgcaggggttgaagttcgaatttcggacaccccac 48031927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 52330953 - 52330920
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| |||||||||||||||||||||||||    
T  52330953 ggttcgaactccggacaccccacttattcacttt 52330920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 55677156 - 55677193
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaa 102  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  55677156 ggttcgaactccggacactccacttattcactttgaaa 55677193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 11863245 - 11863145
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    ||||||||||| |||  || |||||||| |||||||||| | |  ||||||||||| | | ||||||| |||||||||| |||| ||  || ||||||||    
T  11863245 agcatagctcaattggtagggacatgcactattatatgcagggactgaggttcgaacttcagacaccctacttattcaccttgataaaagtgaattctag 11863146  T
Q  117 c 117  Q
    |    
T  11863145 c 11863145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 31578045 - 31578098
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||| |  |||| | ||||||| |||||||||||||||||||||    
T  31578045 atgcattattatatgcgg--gttgggattcgaaacccggacaccccacttattcac 31578098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 39293519 - 39293579
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaa 72  Q
    |||| |||||||||||||||  || ||||||||| ||||||||| | ||||| ||||||||    
T  39293519 ccgtgagcatagctcagttggtagggacatgcataattatatgcaggggttggggttcgaa 39293579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 42758255 - 42758152
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    ||||||||||||||   || ||||||||||||||||||| | ||  | ||||||||  | ||||||||||||||||||| || |||| | | |||| |||    
T  42758255 agcatagctcagtttgtagggacatgcattattatatgcaggggccg-ggttcgaaccctggacaccccacttattcaccttcaaaaagatgaattatag 42758157  T
Q  117 ccact 121  Q
    |||||    
T  42758156 ccact 42758152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 43050031 - 43049987
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    ||||| |||||||||||||||||||  ||||||||| ||||||||    
T  43050031 cccgtgagcatagctcagttgacaggaacatgcattgttatatgc 43049987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 46799400 - 46799491
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||| | ||||| |||  ||| ||||||||||||||| |||   ||||||||||  |||||||||||| |||||||||||    
T  46799400 tgtccccgtgagcatagtttagttggcaggcacaatgcattattatatgcagagcc-gaggttcgaaccccggacaccccatttattcacttt 46799491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 52031203 - 52031291
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||| ||| ||||||||||| |||  ||| ||||||| ||||||| | ||| | ||||||||  || |||||||||||||||||||||    
T  52031203 cccgtgagcttagctcagttggcaggaacaatgcattagtatatgcaggggtcggggttcgaaccccagacaccccacttattcacttt 52031291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 56531338 - 56531254
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttat 91  Q
    ||||| || ||||||||||||||| ||  |||| |||||| |||||||| | ||  | |||||||| ||||||||||||||||||    
T  56531338 gtccctgtgagcatagctcagttggcaaggacaatgcattgttatatgcaggggccggggttcgaactccggacaccccacttat 56531254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 21249087 - 21248978
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    |||||||||||||||||||||||||||||||| |||||||||||| | ||  | ||||||||  | | ||||||||||||||||| ||||||| ||| ||    
T  21249087 cccgtaagcatagctcagttgacagagacatg-attattatatgcaggggccggggttcgaaccctgaacaccccacttattcaccttgaaaaaggtgaa 21248989  T
Q  111 ttctagccact 121  Q
    |||||||||||    
T  21248988 ttctagccact 21248978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 23025886 - 23026003
Alignment:
Q  3 gttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaa 102  Q
    ||||||||||||| ||||||||| ||||| |||| ||||||||||||| |||  | | |||||||| |||  || ||||||||||||||||||||| |||    
T  23025886 gttgtgtccccgtgagcatagctaagttggcagaaacatgcattattaaatgtagcgattgaggtttgaaccccagacaccccacttattcactttaaaa 23025985  T
Q  103 atggtaaattctagccac 120  Q
    | ||| ||||||| ||||    
T  23025986 aaggtgaattctaaccac 23026003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 4045723 - 4045628
Alignment:
Q  20 atagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattcta 115  Q
    |||| ||||||||||| |||||||||| |||||||| | ||| |||||||||| | |||||||||||||||||||  ||||||| ||| |||||||    
T  4045723 atagttcagttgacagggacatgcattgttatatgcaggggtcgaggttcgaacttcggacaccccacttattcatcttgaaaaaggtgaattcta 4045628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 34407175 - 34407080
Alignment:
Q  24 ctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcca 119  Q
    |||||||| ||| ||||||||||||||||||| | ||||| ||||||||  || |||||||||||||||||  ||||||||| | |||||||||||    
T  34407175 ctcagttggcagggacatgcattattatatgcaggggttggggttcgaaccccagacaccccacttattcatcttgaaaatgatgaattctagcca 34407080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 40160728 - 40160842
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||| ||| ||||||||||| ||| ||| |||||||||| |||||||| | || || |||| |||  ||||||||||||||||||||| || |||| ||    
T  40160728 tgtcctcgtgagcatagctcaattggcagggacatgcattgttatatgccggggctggggtttgaaccccggacaccccacttattcacctttaaaaagg 40160827  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  40160828 tgaattctagccact 40160842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 24160630 - 24160517
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||| ||| |||||| |||||||| |||||||||||| | |||||||| | ||| | ||||||||  |||||||| ||||||||||||||| |||| |     
T  24160630 tgtcctcgtgagcataactcagttggcagagacatgcactgttatatgcaggggtcggggttcgaaccccggacactccacttattcactttcaaaaagt 24160531  T
Q  107 taaattctagccac 120  Q
    | ||||||||||||    
T  24160530 tgaattctagccac 24160517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 3993799 - 3993695
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||||||||||||| || |||||||||| |||||||| | ||  | |||| |||  |||||||||||| |||| ||||||||||||||| |||||||     
T  3993799 agcatagctcagttgagagggacatgcattgttatatgcaggggccgcggtttgaaccccggacaccccatttatgcactttgaaaatggtgaattctaa 3993700  T
Q  117 ccact 121  Q
    |||||    
T  3993699 ccact 3993695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 9624975 - 9625067
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  9624975 tgtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 9625067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 27183784 - 27183692
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  27183784 tgtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 27183692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 14868678 - 14868790
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||| |||||||||||||||||||| ||| ||     
T  14868678 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattcactttaaaagtg- 14868776  T
Q  107 taaattctagccact 121  Q
     ||||||||||||||    
T  14868777 -aaattctagccact 14868790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 23237365 - 23237464
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    ||||||||||||||| ||| ||||||||||||||||||  | ||| |  ||||||| |||||||| ||||| ||||||| ||||||| ||| ||||||||    
T  23237365 agcatagctcagttggcagggacatgcattattatatgtaggggtcggagttcgaactccggacatcccacatattcacgttgaaaaaggtgaattctag 23237464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 36331824 - 36331716
Alignment:
Q  12 ccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    |||| ||||||||||| ||| ||| |||| ||||||||||||||| | ||| | ||||||||  |||||||||||||||||||||||| ||||  || ||    
T  36331824 ccgtgagcatagctcaattggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaaa--gtgaa 36331727  T
Q  111 ttctagccact 121  Q
    |||||||||||    
T  36331726 ttctagccact 36331716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 51017796 - 51017895
Alignment:
Q  20 atagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcca 119  Q
    |||||||||||| ||| |||||||||| |||||||| |  || |  |||||||  |||||||||||||||||||||||||||||  || |||||||||||    
T  51017796 atagctcagttggcagggacatgcattgttatatgcaggagtcggagttcgaac-ccggacaccccacttattcactttgaaaaaagtgaattctagcca 51017894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 28951864 - 28951955
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||| |||||| |||||||| |||| |||||||||||||||||| | |||   ||||||||  ||| ||||||||||||||||| |||||||    
T  28951864 ccgtgagcataactcagttggcagatacatgcattattatatgcaggggtcagggttcgaaccccgaacaccccacttattcaccttgaaaa 28951955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 24130552 - 24130666
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| |||||| |||||||| ||| ||||| |||| |||||||| | ||  | |||| |||  ||||||||||||||||||||| ||||||| |     
T  24130552 tgtccccgtgagcataactcagttggcagggacatacattgttatatgcaggggacggggtttgaaccccggacaccccacttattcaccttgaaaaagt 24130651  T
Q  107 taaattctagccact 121  Q
    | ||| |||||||||    
T  24130652 tgaatactagccact 24130666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 24559381 - 24559473
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||  ||| || | ||||| ||||||||| | ||| | ||||||||  ||||||||||||||||||||||||    
T  24559381 tgtccccgtgagcatagctcagttagcagggataatgcataattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttt 24559473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 31902277 - 31902194
Alignment:
Q  37 gacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||| |||||||  | ||| | |||||||| |||||||||||||||||||||| || |||| |||||||| ||||||||    
T  31902277 gacatgcatttttatatgtaggggtcggggttcgaactccggacaccccacttattcacctt-aaaaaggtaaattttagccact 31902194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 37279656 - 37279708
Alignment:
Q  43 cattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||||||| ||||||| |||||||| ||| ||||||||||||||||||    
T  37279656 cattattatatgcagaggttggggttcgaactccagacaccccacttattcac 37279708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 47191366 - 47191454
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||| | || ||  |||||||  ||| |||||||||||||||||    
T  47191366 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggagttcgaaccccgaacaccccacttattcac 47191454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 3955302 - 3955413
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggtt--gaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    ||||| ||||||||||| ||||||| |||| ||||||||||||||| | ||    | ||||||||  |||||||||||||||||||||||| ||||  ||    
T  3955302 cccgtgagcatagctcaattgacagggacaatgcattattatatgcaggggggccggggttcgaaccccggacaccccacttattcactttaaaaa--gt 3955399  T
Q  108 aaattctagccact 121  Q
     |||||||||||||    
T  3955400 gaattctagccact 3955413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 16874292 - 16874213
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacacccca 86  Q
    ||||||||| ||||||||||||||| ||| |||||||||| |||||||| | ||  ||||||||||   |||||||||||    
T  16874292 tgtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccgaggttcgaaccgcggacacccca 16874213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 19137613 - 19137708
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||| ||||||||||||||| |||  ||||||||| |||||||| | ||  ||||||||||  || ||||||||| |||||| | |||||||    
T  19137613 gtccccgtgagcatagctcagttggcaggaacatgcattgttatatgcaggggccgaggttcgaaccccagacaccccatttattctccttgaaaa 19137708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 26583094 - 26583181
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    ||||||||| | |||| |||| ||||||| ||||||||||||||||||| | ||| | |||||||| | |||||||| || |||||||    
T  26583094 tgtccccgtgatcataactcaattgacagggacatgcattattatatgcaggggtcggggttcgaactacggacacctcaattattca 26583181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 28226289 - 28226198
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| | |||| |||||||| |||  ||| ||||||||||||||| | ||||| ||||||||  ||| ||||||||||||||||||||    
T  28226289 gtccccgtgaacataactcagttggcaggaacaatgcattattatatgcaggggttggggttcgaatcccgaacaccccacttattcacttt 28226198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 31108861 - 31108766
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||| || |||||| |||||||| ||| ||||||||| ||||||||| | || || ||||||||  |  |||||||||||||||||| |||||||    
T  31108861 gtccctgtgagcataactcagttggcagggacatgcataattatatgcaggggctggggttcgaacccgagacaccccacttattcaccttgaaaa 31108766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 43598811 - 43598889
Alignment:
Q  27 agttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    ||||| |||||||| ||||||||||||||| ||||| | |||||||| || | |||||||||||||||||||| ||||||    
T  43598811 agttggcagagacaatgcattattatatgcagaggtcggggttcgaactc-gaacaccccacttattcactttaaaaatg 43598889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 50724365 - 50724472
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| |||||||||||||||   || | |||||||||||||||| | ||||| ||||||||   |||||||||||||||||||| || ||||  || ||    
T  50724365 cccgtgagcatagctcagttggtggaca-atgcattattatatgcaggggttggggttcgaacctcggacaccccacttattcaccttaaaaa--gtgaa 50724461  T
Q  111 ttctagccact 121  Q
    |||||||||||    
T  50724462 ttctagccact 50724472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 50788483 - 50788376
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| |||||||||||||||   || | |||||||||||||||| | ||||| ||||||||   |||||||||||||||||||| || ||||  || ||    
T  50788483 cccgtgagcatagctcagttggtggaca-atgcattattatatgcaggggttggggttcgaacctcggacaccccacttattcaccttaaaaa--gtgaa 50788387  T
Q  111 ttctagccact 121  Q
    |||||||||||    
T  50788386 ttctagccact 50788376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 6951890 - 6951844
Alignment:
Q  9 tccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  6951890 tccccgtgagcataactcagttgacagggacatgcattattatatgc 6951844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 31680729 - 31680838
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||   || |||||||||| ||||| |  ||||||| |||| ||| | |||||||||||||||||||| || |||| ||| ||    
T  31680729 cccgtgagcatagctcagtttgtagggacatgcattgttatacgtagaggttggggtttgaacttcggacaccccacttattcacctt-aaaaaggtgaa 31680827  T
Q  111 ttctagccact 121  Q
    || ||||||||    
T  31680828 ttttagccact 31680838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 35483295 - 35483374
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||||||||| | ||| | ||||||||  ||||||||||||||||||||| ||  | | |||||||||||||||||    
T  35483295 atgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcacctt--ataaggtaaattctagccact 35483374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 49146110 - 49146168
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||||||||| | ||| | ||||||||  ||||||||||||||||||||||||    
T  49146110 atgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcacttt 49146168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 49299337 - 49299228
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||| ||||||||||| ||||||||| ||||||||   ||| || |||||| || || ||||| |||||||||||| |||| || | | ||    
T  49299337 cccgtgagcatagttcagttgacagggacatgcataattatatgtaaaggctggggttcg-aacccagacactccacttattcaccttgagaaagctgaa 49299239  T
Q  111 ttctagccact 121  Q
    |||||||||||    
T  49299238 ttctagccact 49299228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 17262267 - 17262320
Alignment:
Q  62 tgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattcta 115  Q
    |||||||||||  ||||||||||||||||||||| ||||||| ||| |||||||    
T  17262267 tgaggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattcta 17262320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 33206754 - 33206838
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| | || || ||||||||  |||||||||||||||||||||    
T  33206754 cccgtgagcatagctcagttggtag-gacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcac 33206838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 43774177 - 43774266
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||| || |||||||||||| ||| |||| |||||| |||||||| | ||| | ||||||||  || ||||||||||||||||||    
T  43774177 tgtccccgtgagtatagctcagttggcagggacaatgcattgttatatgcaggggtcggggttcgaaccccagacaccccacttattcac 43774266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 48659866 - 48659809
Alignment:
Q  64 aggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||| ||||||||||||||||||| || || ||||  ||||||||||||||||    
T  48659866 aggttcgaattccggacaccccacttattgacatttaaaaatgtaaattctagccact 48659809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 51412091 - 51412006
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattc 93  Q
    |||| ||||||||||| ||||||| ||| |||||||||| |||||||| |  || | ||||||||  ||||| |||||||||||||    
T  51412091 gtcctcgtaagcatagttcagttggcagggacatgcattgttatatgcaggagtcggggttcgaatcccggataccccacttattc 51412006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 794100 - 794001
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||||||||| ||| ||||||||||||| |||||||| | ||  | | ||||||  ||||||| ||||||||||| ||||||||  ||| ||||||||    
T  794100 agcatagctcagctgatagagacatgcattgttatatgcgggggccgggattcgaaccccggaca-cccacttattctctttgaaagaggtgaattctag 794002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 3461821 - 3461717
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggaca-ccccacttattcactttgaaaatggtaaa 110  Q
    |||| |||||| |||||||||||| |||||||||| |||||||  | ||||| ||||||||  ||| ||| ||||| ||||||| |||||| | ||| ||    
T  3461821 ccgtgagcataactcagttgacagggacatgcattgttatatgtaggggttggggttcgaaccccgaacacccccatttattcattttgaataaggtgaa 3461722  T
Q  111 ttcta 115  Q
    |||||    
T  3461721 ttcta 3461717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 4478439 - 4478356
Alignment:
Q  38 acatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca-ctttgaaaatggtaaattctagccact 121  Q
    |||||||||||||||||| | ||| | ||||||||  ||||||| |||||||||||| |||| ||||| ||||||| ||||||||    
T  4478439 acatgcattattatatgcaggggtcggggttcgaatcccggacatcccacttattcatctttaaaaat-gtaaattttagccact 4478356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 16278049 - 16277965
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  ||   ||||||||||||||||| | ||| | | |||||| |||||||| |||||||||||||    
T  16278049 cccgtgagcatagctcagttggtaggaccatgcattattatatgcaggggtcgggattcgaactccggacatcccacttattcac 16277965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 22432945 - 22432905
Alignment:
Q  75 ccggacaccccacttattcactttgaaaatggtaaattcta 115  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  22432945 ccggacactccacttattcactttgaaaaaggtaaattcta 22432905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 27043270 - 27043230
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattat 51  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  27043270 cccgtaagcatagcttagttgacagggacatgcattattat 27043230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 31917959 - 31917856
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    ||||||||||||||   ||  ||||||||| |||||||  ||||| | | |||||| | |||||||||||||||||||| || |||| |||||||| |||    
T  31917959 agcatagctcagtttgtaggaacatgcattgttatatgtagaggtcgggcttcgaacttcggacaccccacttattcacctt-aaaaaggtaaattttag 31917861  T
Q  117 ccact 121  Q
    |||||    
T  31917860 ccact 31917856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 7020768 - 7020855
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||| ||| ||||||| ||||||| ||||||||||||||||||||| |   ||| | ||||||||  |||| ||||| ||||||||||    
T  7020768 gtcctcgtgagcatagatcagttggcagagacatgcattattatatacatgggtcggggttcgaaccccggtcacccaacttattcac 7020855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 12236593 - 12236640
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    |||||||| ||| ||||||||||| ||| |||||||||||||||||||    
T  12236593 gtccccgtgagcgtagctcagttggcagggacatgcattattatatgc 12236640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 24890066 - 24890149
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccactta 90  Q
    |||||| ||||||||| |||||||||||  |||||||||| |||||||  | ||||| ||||||||   |||| ||||||||||    
T  24890066 tgtcccggtaagcataactcagttgacaaggacatgcattgttatatgtaggggttggggttcgaacctcggaaaccccactta 24890149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 32080060 - 32080159
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcc 118  Q
    ||||||||||||  ||| | |||| |||||||||||    ||| | ||||||||  ||| ||||||||||||||||| ||||||| ||| ||||||||||    
T  32080060 catagctcagtttgcaggggcatgaattattatatgtatgggtcggggttcgaaccccgaacaccccacttattcaccttgaaaaaggtgaattctagcc 32080159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 39946483 - 39946577
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||| | ||||||| |||||| ||||||||||| ||| ||||||   | ||||| |||||||| |||| ||||||||||||||| | |||||||    
T  39946483 gtccccttgagcatagttcagttaacagagacatgtattgttatatataggggttg-ggttcgaactccgaacaccccacttattctcgttgaaaa 39946577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 46817425 - 46817343
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccactt 89  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||| ||||  ||||||| |||| |||  ||| |||||||||||    
T  46817425 tgtccccgtaagcatagctcaattgacagagacattgcataatt-tatgtagaggttggggtttgaaccccgaacaccccactt 46817343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 52030114 - 52030205
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| |||||| |||||||| ||| |||| || |||||||||||| | ||  | ||||||||  |||||||||| |||||||||||||    
T  52030114 gtccccgtgagcataactcagttggcagggacaatgtattattatatgcaggggccggggttcgaaccccggacaccctacttattcacttt 52030205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 19149418 - 19149464
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatg 54  Q
    |||| ||| ||||||  ||||||||||||||||||||||||||||||    
T  19149418 gtcctcgtgagcataattcagttgacagagacatgcattattatatg 19149464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 21142831 - 21142721
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||||||||||||| |||||  || ||| |||||| |||||||| | ||  | |||||||   ||||| |||| ||||||||||||| |||| ||| ||    
T  21142831 cccgtaagcatagcttagttggtagggacgtgcattgttatatgcaggggccggggttcgagcaccggaaaccctacttattcactttaaaaaaggtgaa 21142732  T
Q  111 ttctagccact 121  Q
    |||||| ||||    
T  21142731 ttctagtcact 21142721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 38507645 - 38507687
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatat 53  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||    
T  38507645 cccgtgagcatagctcagttggcagggacatgcattattatat 38507687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 7448464 - 7448375
Alignment:
Q  9 tccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactt 97  Q
    ||||||| |||||||||||||||| || ||| |||||||||||||||| | ||  | | ||||||  || || |||||||||||||||||    
T  7448464 tccccgtgagcatagctcagttgatagggacaatgcattattatatgcaggggccgggattcgaaccccagataccccacttattcactt 7448375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 7456606 - 7456517
Alignment:
Q  9 tccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactt 97  Q
    ||||||| |||||||||||||||| || ||| |||||||||||||||| | ||  | | ||||||  || || |||||||||||||||||    
T  7456606 tccccgtgagcatagctcagttgatagggacaatgcattattatatgcaggggccgggattcgaaccccagataccccacttattcactt 7456517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 26366284 - 26366231
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattc 93  Q
    |||||||||||||||| |||||||  ||||||| ||||||||||  ||||||||    
T  26366284 atgcattattatatgcagaggttgtagttcgaactccggacaccttacttattc 26366231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 27119272 - 27119354
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttatt 92  Q
    |||||||||| |||||||||| |    ||| |||||||||| |||||||| ||||| | ||||||||  ||| ||||||||||||||    
T  27119272 gtgtccccgtgagcatagctcgg----cagggacatgcattgttatatgcagaggtcggggttcgaatcccgaacaccccacttatt 27119354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 42665968 - 42665931
Alignment:
Q  66 gttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  42665968 gttcgaactccggacaccccacttattcaccttgaaaa 42665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 6054297 - 6054213
Alignment:
Q  37 gacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||| ||| ||| |||| ||||| |  ||||||| |||| ||||| ||||||||||| ||||||| ||| ||||||| |||||    
T  6054297 gacatgtattgttagatgcagaggtcggagttcgaactccgaacacctcacttattcaccttgaaaaaggtgaattctaaccact 6054213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 13540033 - 13539981
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttatt 92  Q
    |||||||||||||||  | ||||| ||||||||  ||||||||||||||||||    
T  13540033 atgcattattatatgtaggggttggggttcgaaccccggacaccccacttatt 13539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 21420258 - 21420206
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttatt 92  Q
    |||||||||||||||| | ||| ||||||||||  | ||||||||||||||||    
T  21420258 atgcattattatatgcagcggtcgaggttcgaatcctggacaccccacttatt 21420206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 30745828 - 30745780
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgagg 60  Q
    |||| ||||||||||||||| ||| |||||||||| |||||||| ||||    
T  30745828 ccgtgagcatagctcagttggcagggacatgcattgttatatgcggagg 30745780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 36842165 - 36842269
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||| ||||||||| || || ||||||| ||| || | | ||| | ||||||||  ||| ||| |||||||||||||||||||||  || |||||||     
T  36842165 agcataactcagttgatagggatatgcatttttaaattcaggggtcggggttcgaaccccgtacatcccacttattcactttgaaaaaagtgaattctaa 36842264  T
Q  117 ccact 121  Q
    |||||    
T  36842265 ccact 36842269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 38555129 - 38555081
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgc 55  Q
    |||||||| ||||||| ||||||| |||||||| |||||||||||||||    
T  38555129 gtccccgtgagcatagttcagttggcagagacaatgcattattatatgc 38555081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 55318078 - 55318106
Alignment:
Q  75 ccggacaccccacttattcactttgaaaa 103  Q
    |||||||||||||||||||||||||||||    
T  55318078 ccggacaccccacttattcactttgaaaa 55318106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 34135 - 34021
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| ||||||||||||||| ||| |||||||||| |||||||| | ||  | |||||||| ||||||||| |||||||||| |||| |||| ||    
T  34135 tgtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttcgaattccggacactccacttattctctttaaaaaagg 34036  T
Q  107 taaattctagccact 121  Q
      |||||||||||||    
T  34035 agaattctagccact 34021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 1028 - 1146
Alignment:
Q  3 gttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaa 102  Q
    |||| |||||||| |||||||||||||||  || ||||||||| ||||||||  | || || ||||||||  || |||||||||||||||||| ||||||    
T  1028 gttgagtccccgtgagcatagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaa 1127  T
Q  103 atggtaaattctagccact 121  Q
    | ||| |||||||||||||    
T  1128 aaggtgaattctagccact 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 220460 - 220350
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| |||||||| | |||||||| |||||   ||||||||  ||||||||||||||||||||| ||||||| ||| ||    
T  220460 cccgtgagcatagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa 220361  T
Q  111 ttctagccact 121  Q
    ||||| |||||    
T  220360 ttctaaccact 220350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 689615 - 689505
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| |||||||| | |||||||| |||||   ||||||||  ||||||||||||||||||||| ||||||| ||| ||    
T  689615 cccgtgagcatagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa 689516  T
Q  111 ttctagccact 121  Q
    ||||| |||||    
T  689515 ttctaaccact 689505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 734083 - 733973
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| |||||||| | |||||||| |||||   ||||||||  ||||||||||||||||||||| ||||||| ||| ||    
T  734083 cccgtgagcatagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa 733984  T
Q  111 ttctagccact 121  Q
    ||||| |||||    
T  733983 ttctaaccact 733973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 857979 - 857869
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| |||||||| | |||||||| |||||   ||||||||  ||||||||||||||||||||| ||||||| ||| ||    
T  857979 cccgtgagcatagctcagttggcagggacatgcaatgttatatgcagaggtcagggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaa 857880  T
Q  111 ttctagccact 121  Q
    ||||| |||||    
T  857879 ttctaaccact 857869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 39432430 - 39432334
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||||||| ||||||||||||||| ||| |||||||| | |||||||| | ||||| ||||||||   | ||||||||||||||||||||||||||    
T  39432430 tgtccccgtgagcatagctcagttggcagggacatgcaatgttatatgcaggggttggggttcgaacctcagacaccccacttattcactttgaaaa 39432334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 25470951 - 25470834
Alignment:
Q  4 ttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||||| |||||| ||||||||||||  |||||||||||||||| |   ||| | ||||||||   ||||||||||| |||||||| ||||| |    
T  25470951 ttgtgtccccgtgagcataactcagttgacaggaacatgcattattatattcatgggtcggggttcgaacctcggacaccccatttattcaccttgaaga 25470852  T
Q  104 tggtaaattctagccact 121  Q
     ||| |||||||||||||    
T  25470851 aggtgaattctagccact 25470834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 2800012 - 2800103
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  2800012 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 2800103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 10292345 - 10292436
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||| | || |||| ||||||   |||||||||||||||||||||||    
T  10292345 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctgagattcgaacctcggacaccccacttattcacttt 10292436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 2696525 - 2696617
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| |||||| |||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  2696525 tgtccccgtgagcataactcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcacttt 2696617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 10310275 - 10310366
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||||| ||| |||||||| |||||||| ||||||||||||| | ||||| |  ||| |||  ||||||||||||||||||||||||    
T  10310275 gtccccgtaagtataactcagttggcagagacaatgcattattatatacagaggtcggagtttgaatcccggacaccccacttattcacttt 10310366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 35301253 - 35301174
Alignment:
Q  20 atagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||||| ||| |||| ||||||||||||||| | ||| | |||||||| ||||||||||| |||||||||||||    
T  35301253 atagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaactccggacaccctacttattcacttt 35301174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 216245 - 216135
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| ||||| |||| |||||||| |||||   ||||||||   |||||||| ||||||||||| ||||||| ||| ||    
T  216245 cccgtgagcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaa 216146  T
Q  111 ttctagccact 121  Q
    | ||| |||||    
T  216145 tactaaccact 216135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 692805 - 692695
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| ||||| |||| |||||||| |||||   ||||||||   |||||||| ||||||||||| ||||||| ||| ||    
T  692805 cccgtgagcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaa 692706  T
Q  111 ttctagccact 121  Q
    | ||| |||||    
T  692705 tactaaccact 692695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 697014 - 696904
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| ||||| |||| |||||||| |||||   ||||||||   |||||||| ||||||||||| ||||||| ||| ||    
T  697014 cccgtgagcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaa 696915  T
Q  111 ttctagccact 121  Q
    | ||| |||||    
T  696914 tactaaccact 696904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 729868 - 729758
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| ||||| |||| |||||||| |||||   ||||||||   |||||||| ||||||||||| ||||||| ||| ||    
T  729868 cccgtgagcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaa 729769  T
Q  111 ttctagccact 121  Q
    | ||| |||||    
T  729768 tactaaccact 729758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 853763 - 853653
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||||||||||| ||| ||||| |||| |||||||| |||||   ||||||||   |||||||| ||||||||||| ||||||| ||| ||    
T  853763 cccgtgagcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcaccttgaaaaaggtgaa 853664  T
Q  111 ttctagccact 121  Q
    | ||| |||||    
T  853663 tactaaccact 853653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 6325264 - 6325376
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| |||||| ||||||||| || ||||| ||| ||||||||| | ||||| |||| |||  || ||||||||||| |||||| ||||||| ||    
T  6325264 tgtccccgtgagcata-ctcagttgatagggacatacataattatatgcaggggttggggtttgaac-ccagacaccccactcattcaccttgaaaaagg 6325361  T
Q  107 taaattctagccact 121  Q
    | |||||||||||||    
T  6325362 tgaattctagccact 6325376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 11900572 - 11900672
Alignment:
Q  20 atagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcca 119  Q
    |||||||||||| |||  |||||||||||||||||| | |||||||||| | ||  | || ||||||||||||||  ||||||| ||| |||||||||||    
T  11900572 atagctcagttggcaggaacatgcattattatatgcaggggttgaggtttg-aacacagataccccacttattcatcttgaaaaaggtgaattctagcca 11900670  T
Q  120 ct 121  Q
    ||    
T  11900671 ct 11900672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 14012604 - 14012693
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||||| ||||||| ||||||| ||| |||| |||||| |||||||| | ||  | |||||||| ||||||||||||||||||||||    
T  14012604 tgtccccgtgagcatagttcagttggcagggacaatgcattgttatatgcaggggccggggttcgaagtccggacaccccacttattcac 14012693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 22847344 - 22847247
Alignment:
Q  27 agttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccacttga 124  Q
    ||||| ||| |||||||||| |||||||| | ||| ||||||||||  ||  ||||| ||||||||||| || |||| ||| ||||||||||||||||    
T  22847344 agttggcagggacatgcattgttatatgcaggggtcgaggttcgaaccccacacacctcacttattcaccttaaaaaaggtgaattctagccacttga 22847247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 7345425 - 7345529
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| |||||| |||||||| ||| ||||||||||||||||||| | ||| | | ||| || |||  ||||||||||||||||| || |||| ||| ||    
T  7345425 cccgtgagcataactcagttggcagggacatgcattattatatgcaggggtcgggcttccaactccaaacaccccacttattcaccttaaaaaaggtgaa 7345524  T
Q  111 ttcta 115  Q
    |||||    
T  7345525 ttcta 7345529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 30500481 - 30500557
Alignment:
Q  27 agttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||| ||||||||||||||||||||||  | ||||| |||||||| |||||||   |||||||||||| |||||||    
T  30500481 agttggcagagacatgcattattatatgtaggggttggggttcgaactccggaccatccacttattcacattgaaaa 30500557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 36815567 - 36815519
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagac-atgcattattatat 53  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  36815567 gtgtccccgtgagcatagctcagttgacagagacaatgcattattatat 36815519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 22426398 - 22426485
Alignment:
Q  12 ccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||| |||||| |||| ||||||| |||| ||||||||||||||  | ||||||||||||||  || ||||||||| |||||||||||    
T  22426398 ccgtgagcataactcaattgacagggacaatgcattattatatgtaggggttgaggttcgaacccctgacaccccatttattcacttt 22426485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 33982183 - 33982274
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| |||||||||||||||||||| ||| | |||| |||||||| | ||| | ||||||||  || |||||| ||||||||||||||    
T  33982183 gtccccgtgagcatagctcagttgacagaaacattacattgttatatgcaggggtcggggttcgaaccccagacaccgcacttattcacttt 33982274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 31129297 - 31129386
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| | ||||||||||||| ||| |||| ||||||||||||||    ||| | ||||||||  ||||||||||||||||||||||||    
T  31129297 tgtccccgtgatcatagctcagttggcagggacaatgcattattatatgg---ggtcggggttcgaaccccggacaccccacttattcacttt 31129386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 44254414 - 44254300
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatgg 106  Q
    ||||||||| ||| ||||| |  |||||| ||||||||||||||||||| |  || | |||||||| || ||||| || |||||||||| |||||||  |    
T  44254414 tgtccccgttagcttagcttaaatgacagggacatgcattattatatgcgggagtcggggttcgaactctggacatcctacttattcaccttgaaaaatg 44254315  T
Q  107 taaattctagccact 121  Q
    | |||| ||||||||    
T  44254314 tgaattttagccact 44254300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 25408801 - 25408684
Alignment:
Q  4 ttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||||| |||||| |||||||||||  ||||| |||||||||||| |  ||| || |||||||   |||||||| ||||  || || ||||| |    
T  25408801 ttgtgtccccgtgagcataactcagttgacatggacatacattattatatgtttgggtcgaagttcgaatctcggacacctcactgttttaccttgaaga 25408702  T
Q  104 tggtaaattctagccact 121  Q
     ||| |||||||||||||    
T  25408701 aggtgaattctagccact 25408684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 1588759 - 1588851
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||| || ||||||||| ||||| ||| |||| ||||||||||||||| | ||  | ||||||||   |||||||||||||||||||||||    
T  1588759 tgtccctgtgagcatagcttagttggcagggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcacttt 1588851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 12926522 - 12926466
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||  ||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  12926522 ggttcgaatcccggacacctcacttattcatcttgaaaaaggtaaattctagccact 12926466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 14010870 - 14010762
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaa 109  Q
    ||||| |||||||||||||||  | ||||| |||||||||||||| |  ||| | ||||||||  ||||||||||||||||||||| ||  | | |||||    
T  14010870 cccgtgagcatagctcagttggta-agacagtgcattattatatgttatggtcggggttcgaaccccggacaccccacttattcacctt--ataaggtaa 14010774  T
Q  110 attctagccact 121  Q
    ||||||||||||    
T  14010773 attctagccact 14010762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 7314762 - 7314817
Alignment:
Q  43 cattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||||||| | ||  ||||||||||  ||||||||||||||||||||||||    
T  7314762 cattattatatgcaggggccgaggttcgaaccccggacaccccacttattcacttt 7314817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 35253889 - 35253835
Alignment:
Q  43 cattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||| ||||||| | ||||| |||||||| |||||||||||||||||||||||||    
T  35253889 cattaatatatgcaggggttggggttcgaa-tccggacaccccacttattcacttt 35253835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 4798610 - 4798531
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||| ||| ||  ||| |||||||||||||    
T  4798610 atgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgtaa--ggtgaattctagccact 4798531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 8740725 - 8740671
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    ||||| |||||||||| | || ||||||||||| ||||||||||| |||||||||    
T  8740725 atgcagtattatatgcaggggctgaggttcgaactccggacaccctacttattca 8740671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 25119234 - 25119313
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    |||||||||||||||| | ||||| ||||||||  ||||||| |||||| |||||| ||| ||   ||||||||||||||||    
T  25119234 atgcattattatatgcaggggttggggttcgaaccccggacatcccactcattcaccttgtaa--tgtaaattctagccact 25119313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 32940416 - 32940370
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatat 53  Q
    ||||||||| || |||||||||||||||| |||||||||| ||||||    
T  32940416 tgtccccgtgagtatagctcagttgacagggacatgcattgttatat 32940370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 37989133 - 37989055
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||| ||||||| |||| |||||||||| ||||| || ||| |||  ||| ||| |||| |||||||||||||||||    
T  37989133 agcataactcagttaacagggacatgcattgttataggcagagattggagtttgaactccgaacaccccacttattcac 37989055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 15042463 - 15042379
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| | ||  | ||||||||  |||||||||||||||||||||    
T  15042463 cccgtgagcatagctcagttggtag-gacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcac 15042379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 29653057 - 29653162
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca-ctttgaaaatggtaaattcta 115  Q
    ||||||| ||| ||| ||| ||||||||||||||||||| | | | | |||||||| ||| | ||| ||||||||||| |||  |||| ||| |||||||    
T  29653057 agcatagttcaattggcagggacatgcattattatatgcagggatcgtggttcgaactcctgccactccacttattcaccttaaaaaaaggtgaattcta 29653156  T
Q  116 gccact 121  Q
    ||||||    
T  29653157 gccact 29653162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 35779767 - 35779857
Alignment:
Q  26 cagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcc 118  Q
    ||||||| ||||||||||||| ||||||||  |||| | ||||||||    ||||||||||||||||||  ||||||| | | ||||||||||    
T  35779767 cagttgatagagacatgcattgttatatgc--aggtcggggttcgaacctaggacaccccacttattcatcttgaaaaagatgaattctagcc 35779857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 43468803 - 43468719
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| |||||| |||||||  | ||| | |||||||| ||||||||||||||||||||||    
T  43468803 cccgtgagcatagctcagttggtag-gacaatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttattcac 43468719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 13654897 - 13654833
Alignment:
Q  39 catgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||| |||| | ||||| | | ||| || ||||||||||||||||||||||||| ||||    
T  13654897 catgcattatcatatacagaggtcgggattcaaactccggacaccccacttattcactttaaaaa 13654833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 13713539 - 13713475
Alignment:
Q  39 catgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    |||||||||| |||| | ||||| | | ||| || ||||||||||||||||||||||||| ||||    
T  13713539 catgcattatcatatacagaggtcgggattcaaactccggacaccccacttattcactttaaaaa 13713475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 36593192 - 36593252
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaa 72  Q
    ||||||| ||||||||||||  || |||||||||| |||||| | ||||||| ||||||||    
T  36593192 ccgtaagtatagctcagttggtagggacatgcattgttatatacagaggttggggttcgaa 36593252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 39484468 - 39484385
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||    
T  39484468 cccgtgagcatagctcagttggtag-gacaatgcattattatatgcaggggccggggttcgaatgccggacaccccacttattca 39484385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 24256913 - 24257023
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaa 110  Q
    ||||| ||||||  |||||||  |||||||||||||||||||||| | ||  ||||||||||  ||||| ||||||||||||||| |||||||  |||||    
T  24256913 cccgtgagcataagtcagttggtagagacatgcattattatatgcaggggccgaggttcgaaccccggataccccacttattcaccttgaaaaaagtaaa 24257012  T
Q  111 ttctagccact 121  Q
    |||||||||||    
T  24257013 ttctagccact 24257023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 26669765 - 26669647
Alignment:
Q  3 gttgtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaa 102  Q
    |||| |||||||| |||||||||||||||  || ||||||||| ||||||||  | || || ||||||||  || |||||||||||||||||| ||||||    
T  26669765 gttgagtccccgtgagcatagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaa 26669666  T
Q  103 atggtaaattctagccact 121  Q
    | ||| |||||||||||||    
T  26669665 aaggtgaattctagccact 26669647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 8175990 - 8176077
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||| | |  ||  ||||||| |||| |||||||||||||||||    
T  8175990 gtccccgtgagcatagctcagttgacagagacatgcattgttatatgcagggactggtgttcgaactccgaacaccccacttattcac 8176077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 34524867 - 34524982
Alignment:
Q  6 gtgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatg 105  Q
    |||||||||| ||||||||||||||| ||| |||||||||| |||||||| | ||  | |||||||   ||| ||||||||||||||||| | ||||| |    
T  34524867 gtgtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttcgagccccgaacaccccacttattcacctggaaaaag 34524966  T
Q  106 gtaaattctagccact 121  Q
    || |||||||||||||    
T  34524967 gtgaattctagccact 34524982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 14949121 - 14949007
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggaca-ccccacttattcactttgaaaatgg 106  Q
    |||||| | |||||| |||||||| |||| |||| ||||||||||||| ||||| | |||||||| |||||||| ||||| |||||||| ||||||| ||    
T  14949121 gtccccttgagcataactcagttggcagaaacatacattattatatgcagaggtcggggttcgaactccggacacccccatttattcaccttgaaaaagg 14949022  T
Q  107 taaattctagccact 121  Q
    | |||| ||||||||    
T  14949021 tgaattatagccact 14949007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 22730804 - 22730689
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaa-atg 105  Q
    ||||||||| |||||| |||||||| |||||||||||||| |||||||| | |  ||| |||||||   |||||||||||||||||||| || ||| | |    
T  22730804 tgtccccgtgagcataactcagttggcagagacatgcattgttatatgcagggactgaagttcgaacctcggacaccccacttattcaccttaaaataag 22730705  T
Q  106 gtaaattctagccact 121  Q
    || |||||||||||||    
T  22730704 gtgaattctagccact 22730689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 30833011 - 30833122
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||| | ||||||| ||||||| ||| |||||||||| |||||||| | ||| | ||||||||  ||||||||||||||||||| | ||||||| ||     
T  30833011 gtccccatgagcatagttcagttggcagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattctccttgaaaaagga 30833110  T
Q  108 aaattctagcca 119  Q
     |||||||||||    
T  30833111 gaattctagcca 30833122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 20858477 - 20858400
Alignment:
Q  15 taagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttatt 92  Q
    |||||||| |||||||| ||| |||||||||| |||||||| | ||||| |||||||| ||||||||||||| |||||    
T  20858477 taagcataactcagttggcagggacatgcattgttatatgcaggggttggggttcgaattccggacaccccatttatt 20858400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 5134536 - 5134448
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||||| ||||  | ||||||||   | ||||||||||||||||||    
T  5134536 gtccccgtaagcatagctcagttggcagagacaatgcattgttatatgcagaggccgcggttcgaacctcagacaccccacttattcac 5134448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 32394022 - 32394106
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||| |||||||| ||| |||||| ||| |  ||||| |||||||||||| |||  |||||||||||||||||||||    
T  32394022 cccgtaagcataactcagttggcagggacatgtattgtcttatgcagaggttgaggtttgaatcccggacaccccacttattcac 32394106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 6143958 - 6144048
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||  | ||| | ||||||||  ||||||||||||||||||||||||    
T  6143958 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgtaggggtcg-ggttcgaaccccggacaccccacttattcacttt 6144048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 14981804 - 14981713
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  | ||||||||||||||||||||||    
T  14981804 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccctggacaccccacttattcacttt 14981713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 1488091 - 1488189
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattcta 115  Q
    |||||| |||| ||| |||||||||||||| |||||||| ||||| | ||||||||  ||  |||||||| |||||||| || |||||||| |||||||    
T  1488091 agcatatctcaattggcagagacatgcattgttatatgcagaggtcggggttcgaaccccaaacaccccatttattcaccttaaaaatggtgaattcta 1488189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 9064858 - 9064950
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  || ||||||||||||||| |||||    
T  9064858 tgtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttatttacttt 9064950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 9422830 - 9422941
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttga-aaatggtaa 109  Q
    ||||| |||||| |||||||| ||| |||||||||| |||||| |    | || ||||||||  ||||||||||||||||||||| |||| ||| ||| |    
T  9422830 cccgtgagcataactcagttggcagggacatgcattgttatatacaagagctggggttcgaacaccggacaccccacttattcaccttgataaaaggtga 9422929  T
Q  110 attctagccact 121  Q
    ||||||||||||    
T  9422930 attctagccact 9422941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 24470493 - 24470402
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | | ||  |  |||||||  ||||| | ||||||||||||||||    
T  24470493 gtccccgtaagcatagctcagttggcagagacaatgcattattatatacaggggccggagttcgaaccccggaaatcccacttattcacttt 24470402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 30566084 - 30566139
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||| |||||||| ||| |||  |||||||||||||||||||||    
T  30566084 atgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcac 30566139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 17751422 - 17751344
Alignment:
Q  24 ctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaa 102  Q
    |||||||| ||  |||||||||| |||||||| |  |  ||||||||||  ||||||||||||||||||||||||||||    
T  17751422 ctcagttggcatggacatgcattgttatatgcaggagcagaggttcgaaccccggacaccccacttattcactttgaaa 17751344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 25064770 - 25064684
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    |||||||| ||||||| |||||||  |  ||||||||||||||||||| | ||||| ||||||||  || |||||||||||| ||||    
T  25064770 gtccccgtgagcatagttcagttggtatggacatgcattattatatgcaggggttggggttcgaaccccagacaccccacttcttca 25064684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 32541043 - 32540965
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||| ||||||| |||||||||||||||||||||   ||||| |  ||||||| ||| || |||||||||||||||    
T  32541043 agcatagttcagttggcagagacatgcattattatatatagaggtcggagttcgaactccagataccccacttattcac 32540965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 6455447 - 6455560
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggt 107  Q
    |||||||| | ||||| |||||||  || ||||| ||||||||||||    || || |||||||| ||||||||||| |||||||||| ||||||| | |    
T  6455447 gtccccgtgaacatagttcagttggtagggacatacattattatatgtatgggctggggttcgaactccggacaccctacttattcaccttgaaaaagat 6455546  T
Q  108 aaattctagccact 121  Q
     |||||||| ||||    
T  6455547 gaattctagacact 6455560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 7234027 - 7234075
Alignment:
Q  76 cggacaccccacttattcactttgaaaatggtaaattctagccacttga 124  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||| ||||    
T  7234027 cggacaccccacttattcaccttgaaaaaggtgaattctagccaattga 7234075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 17176142 - 17176190
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    ||||| ||||| ||||||||||||||||| |||||||||| ||||||||    
T  17176142 tgtcctcgtaaacatagctcagttgacagggacatgcattgttatatgc 17176190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 29204966 - 29204858
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaat 111  Q
    |||| |||||||| |||||  ||| ||||| || |||||||||| ||||| | |||||||| | || ||||||||||||||||| || ||||  || |||    
T  29204966 ccgttagcatagcacagttagcagcgacatacaatattatatgcggaggtcggggttcgaacttcgaacaccccacttattcaccttaaaaaaagtgaat 29204867  T
Q  112 tctagccac 120  Q
    |||| ||||    
T  29204866 tctaaccac 29204858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 9438328 - 9438383
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||| | ||||| ||||||||  |||||||||||||| ||||||    
T  9438328 atgcattattatatgcaggggttggggttcgaaccccggacaccccactcattcac 9438383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 10424626 - 10424523
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||| ||||||||| ||| | |||||||||||||||  | ||| | |||| |||  ||||||||||||||||||||| ||  |||  |||||||||||    
T  10424626 agcataactcagttgatagaca-atgcattattatatgtaggggtcgtggtttgaatcccggacaccccacttattcaccttataaa--gtaaattctag 10424530  T
Q  117 ccacttg 123  Q
    |||||||    
T  10424529 ccacttg 10424523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 14948876 - 14948833
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgagg 60  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  14948876 agcatagctcagttgacagggacatacattattatatgcagagg 14948833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 19135924 - 19135987
Alignment:
Q  9 tccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaa 72  Q
    ||||||| |||||||||| |||| ||| |||||||||||||||||||   |||||| |||||||    
T  19135924 tccccgtgagcatagctcggttggcagggacatgcattattatatgcatgggttgacgttcgaa 19135987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 19165377 - 19165431
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||| ||||||| |||||| || || ||||||||||||||||||    
T  19165377 atgcattattatatgcagaggttggggttcg-aaccccgacaccccacttattcac 19165431  T

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Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 2945588 - 2945674
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagac-atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttatt 92  Q
    ||||||||| ||||||||||||||| ||| ||| ||||||| |||||||| | ||| | ||||| ||   |||||||||||||||||    
T  2945588 tgtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggtcggggttcaaacctcggacaccccacttatt 2945674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 6219347 - 6219393
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatat 53  Q
    ||||||||| | ||||||||||||| ||| |||||||||||||||||    
T  6219347 tgtccccgtgaacatagctcagttggcagggacatgcattattatat 6219393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 9031760 - 9031846
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    |||||||| | ||||||||||||| ||| |||||||||| |||||||| | | |||| ||| |||   | |||||||||||||||||    
T  9031760 gtccccgtgaacatagctcagttggcagggacatgcattgttatatgcagggcttgaagtttgaacctcagacaccccacttattca 9031846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 31595176 - 31595278
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcc 118  Q
    ||||| ||| ||| ||| |||||||||| ||||||   | ||||||| |||||| | | || ||||| |||||| |||||||||| ||||||||||| ||    
T  31595176 catagttcaattgtcagggacatgcattgttatatataggggttgagattcgaacttcagataccccgcttatttactttgaaaacggtaaattctatcc 31595275  T
Q  119 act 121  Q
    |||    
T  31595276 act 31595278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 22389848 - 22389764
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||| ||||||||||||||| | |||   ||||||||  |||||||||||||||||||||    
T  22389848 cccgtgagcatagctcagttggtag-gacaatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttattcac 22389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 29430336 - 29430295
Alignment:
Q  76 cggacaccccacttattcactttgaaaatggtaaattctagc 117  Q
    |||||||||||||||||||| || |||| |||||||||||||    
T  29430336 cggacaccccacttattcacctttaaaaaggtaaattctagc 29430295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 33947381 - 33947490
Alignment:
Q  12 ccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaat 111  Q
    |||| |||||| ||||||||  |  |||||||||| ||| |||| ||||||| |||| ||| | | || ||| | ||||||||| || |||| |||||||    
T  33947381 ccgtgagcatatctcagttggtatggacatgcattgttacatgcagaggttgtggttagaacttcagatacctcgcttattcaccttaaaaaaggtaaat 33947480  T
Q  112 tctagccact 121  Q
    ||||||||||    
T  33947481 tctagccact 33947490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 3448344 - 3448432
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    ||||||||| ||||||||||| ||| ||| |||| |||||| ||||| || | ||  | ||||||||  ||||||||||||||||||||    
T  3448344 tgtccccgtgagcatagctcaattggcagggacaatgcattgttatacgcaggggccggggttcgaaccccggacaccccacttattca 3448432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 8253676 - 8253597
Alignment:
Q  23 gctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaa 103  Q
    ||||||||| ||  |||||||||| |||||||| | || || ||||||||  || |||||||||||||||||| |||||||    
T  8253676 gctcagttggcatggacatgcattgttatatgcaggggctggggttcgaac-ccagacaccccacttattcaccttgaaaa 8253597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 10455736 - 10455832
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggaca-ccccacttattcactttgaaaa 103  Q
    |||||||| ||||||| ||||||| |||  ||||||||| |||||||| | ||  | ||||||||  ||||||| |||||||||||| | |||||||    
T  10455736 gtccccgtgagcatagttcagttggcaggaacatgcattgttatatgcaggggccggggttcgaaccccggacacccccacttattctccttgaaaa 10455832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 19680292 - 19680236
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||  ||||||||||||||||||| | ||||||| ||| |||||||| ||||    
T  19680292 ggttcgaaccccggacaccccacttattctccttgaaaaaggtgaattctagacact 19680236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 23771059 - 23771115
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcact 96  Q
    |||||||||||||||| | ||  | |||||||| ||||||||||||| |||||||||    
T  23771059 atgcattattatatgcaggggaaggggttcgaactccggacaccccatttattcact 23771115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 32057031 - 32057114
Alignment:
Q  11 cccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    ||||| |||||||||||||||| || |||| ||||||||||||||| | ||| ||||||||||  || || | ||||||||||||    
T  32057031 cccgtgagcatagctcagttgatag-gacaatgcattattatatgcagtggtcgaggttcgaaccccagagatcccacttattca 32057114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 32344684 - 32344720
Alignment:
Q  59 ggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  32344684 ggttggggttcgaactccggacaccccacttattcac 32344720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 34675850 - 34675794
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||  |||||||||||| ||||||||||| ||||  || |||||||||||||    
T  34675850 ggttcgaaccccggacaccccagttattcactttaaaaaatgtgaattctagccact 34675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 34883734 - 34883819
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||| |||||| ||||||||  || ||||||| |||||||| ||   ||||| ||||| ||  |||||||||||||||||||||    
T  34883734 gtccccgtgagcataactcagttggtagggacatgcgttattatacgcaagggttggggttcaaa--ccggacaccccacttattcac 34883819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 25019 - 25106
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattca 94  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||| | || || ||||||||  ||||||||||||||||||||    
T  25019 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattca 25106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 744 - 825
Alignment:
Q  14 gtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||| |||||||| || |||| ||||||||||||||| |||| ||||||||||| || |||||||||||||||||||    
T  744 gtaagcatagttcagttgatag-gacaatgcattattatatgcggaggctgaggttcgaactctggacaccccacttattcac 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 108430 - 108353
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagcca 119  Q
    |||||||||||||||| | || |||||||| ||  |||||||||||||||||||||||| ||||  ||||||||||||||    
T  108430 atgcattattatatgcaggggctgaggttcaaaccccggacaccccacttattcactttaaaaa--gtaaattctagcca 108353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 4907 - 4817
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||  | ||||||||  ||||||||||||||||||||||||    
T  4907 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggcgg-ggttcgaatcccggacaccccacttattcacttt 4817  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 270782 - 270726
Alignment:
Q  65 ggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctagccact 121  Q
    ||||||||  ||||||| |||||||| |||||||||||||||| |||||||||||||    
T  270782 ggttcgaatcccggacatcccacttactcactttgaaaatggtgaattctagccact 270726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 2514 - 2569
Alignment:
Q  40 atgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    |||||||||||||||| |||||||| ||| |||  |||||||||||||||||||||    
T  2514 atgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcac 2569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 7069 - 7160
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| |||||||||||||||  || |||| ||||||||||||||| | ||  | ||||||||  |||||||||||| |||||||||||    
T  7069 gtccccgtgagcatagctcagttgttagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccatttattcacttt 7160  T

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Target: scaffold0227 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 21843 - 21933
Alignment:
Q  8 gtccccgtaagcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||| || |||||||||||| |||| ||| || |||||||||||| | ||||| ||||||||  ||| ||||||||||||||||||||    
T  21843 gtccccgtgagtatagctcagttggcagaaacaatgtattattatatgcaggggttggggttcgaac-ccgaacaccccacttattcacttt 21933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 67164 - 67268
Alignment:
Q  17 agcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcactttgaaaatggtaaattctag 116  Q
    |||||||||||||||  || || ||||||| |||||||  | || || ||||||||  | |||||||||||||| |||| |||||||  || ||||||||    
T  67164 agcatagctcagttgggagggatatgcattgttatatgtaggggctggggttcgaaccctggacaccccacttaatcaccttgaaaaaagtgaattctag 67263  T
Q  117 ccact 121  Q
    |||||    
T  67264 ccact 67268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 4326 - 4407
Alignment:
Q  17 agcatagctcagttgacagagaca-tgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcacttt 98  Q
    |||||||||||||||| || |||| | ||||||||||||| | ||| | ||||||||  |||||||| |||||||||||||||    
T  4326 agcatagctcagttgatag-gacaatacattattatatgcaggggtcggggttcgaaccccggacactccacttattcacttt 4407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 37372 - 37418
Alignment:
Q  49 tatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||||| ||||||||| |||||| ||||||||| ||||||||||||    
T  37372 tatatgcagaggttgagattcgaagtccggacactccacttattcac 37418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 21054 - 21013
Alignment:
Q  19 catagctcagttgacagagacatgcattattatatgctgagg 60  Q
    |||||||||||||||| ||||||||||| |||||||| ||||    
T  21054 catagctcagttgacaaagacatgcattgttatatgcagagg 21013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 4513 - 4561
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    |||| |||| ||||||||||||||| ||| |||||||||| ||||||||    
T  4513 tgtctccgtgagcatagctcagttggcagggacatgcattgttatatgc 4561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 4533 - 4581
Alignment:
Q  7 tgtccccgtaagcatagctcagttgacagagacatgcattattatatgc 55  Q
    |||| |||| ||||||||||||||| ||| |||||||||| ||||||||    
T  4533 tgtctccgtgagcatagctcagttggcagggacatgcattgttatatgc 4581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 37426 - 37342
Alignment:
Q  11 cccgtaagcatagctcagttgacagagacatgcattattatatgctgaggttgaggttcgaaatccggacaccccacttattcac 95  Q
    ||||| |||||||||||||||  || |||||||||| || ||| | | ||  || |||||||| | |||||||||||||||||||    
T  37426 cccgtgagcatagctcagttggtagggacatgcattgttttatacaggggccgatgttcgaaacctggacaccccacttattcac 37342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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