View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0225-INSERTION-7 (Length: 664)

Name: NF0225-INSERTION-7
Description: NF0225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0225-INSERTION-7
NF0225-INSERTION-7
[»] chr5 (32 HSPs)
chr5 (77-664)||(20028364-20028973)
chr5 (121-249)||(39607510-39607637)
chr5 (212-263)||(18704045-18704096)
chr5 (213-259)||(12521542-12521588)
chr5 (212-263)||(38104866-38104917)
chr5 (213-263)||(18906352-18906402)
chr5 (213-251)||(35963263-35963301)
chr5 (213-263)||(37588370-37588420)
chr5 (213-263)||(19138727-19138779)
chr5 (214-263)||(32408603-32408652)
chr5 (212-248)||(5951977-5952013)
chr5 (213-253)||(37690646-37690686)
chr5 (216-263)||(1084134-1084181)
chr5 (212-263)||(11707065-11707116)
chr5 (216-263)||(12242723-12242770)
chr5 (213-260)||(19460580-19460627)
chr5 (213-259)||(2880557-2880603)
chr5 (220-262)||(6183455-6183497)
chr5 (213-263)||(8651363-8651412)
chr5 (213-263)||(17258893-17258943)
chr5 (221-263)||(32172663-32172705)
chr5 (213-263)||(33533549-33533599)
chr5 (213-263)||(36639532-36639582)
chr5 (213-263)||(37526209-37526259)
chr5 (213-263)||(37611225-37611275)
chr5 (213-263)||(37787955-37788005)
chr5 (213-262)||(18902806-18902855)
chr5 (222-263)||(35553207-35553248)
chr5 (212-245)||(40590786-40590819)
chr5 (220-260)||(985626-985666)
chr5 (213-245)||(6109511-6109543)
chr5 (219-263)||(40205090-40205134)
[»] scaffold0089 (2 HSPs)
scaffold0089 (328-664)||(33813-34159)
scaffold0089 (77-322)||(33501-33758)
[»] chr3 (27 HSPs)
chr3 (328-664)||(13370655-13371001)
chr3 (77-322)||(13371056-13371313)
chr3 (212-253)||(5292529-5292570)
chr3 (212-263)||(26542547-26542598)
chr3 (212-263)||(27792882-27792933)
chr3 (213-263)||(54180790-54180840)
chr3 (219-263)||(14548737-14548781)
chr3 (213-245)||(21862185-21862217)
chr3 (213-245)||(45432949-45432981)
chr3 (212-260)||(49546493-49546541)
chr3 (213-261)||(54137636-54137684)
chr3 (220-263)||(2071066-2071109)
chr3 (212-263)||(9279335-9279386)
chr3 (212-263)||(23793594-23793645)
chr3 (212-263)||(41633370-41633421)
chr3 (213-263)||(12985355-12985405)
chr3 (213-263)||(23785265-23785315)
chr3 (213-263)||(34414794-34414844)
chr3 (213-259)||(36200110-36200156)
chr3 (213-263)||(37273144-37273194)
chr3 (213-243)||(38462311-38462341)
chr3 (218-263)||(20502083-20502128)
chr3 (223-260)||(23315639-23315676)
chr3 (214-259)||(52614181-52614226)
chr3 (219-263)||(24887299-24887343)
chr3 (213-245)||(37825150-37825182)
chr3 (213-245)||(43115084-43115116)
[»] chr6 (31 HSPs)
chr6 (328-664)||(20512830-20513176)
chr6 (77-322)||(20512518-20512775)
chr6 (208-271)||(10154223-10154286)
chr6 (214-258)||(2460162-2460206)
chr6 (213-248)||(6536972-6537007)
chr6 (212-255)||(7785753-7785796)
chr6 (214-260)||(34939526-34939572)
chr6 (213-245)||(27909648-27909680)
chr6 (212-263)||(1401119-1401170)
chr6 (214-245)||(7931800-7931831)
chr6 (214-257)||(13908479-13908522)
chr6 (212-259)||(27998425-27998472)
chr6 (212-263)||(28088231-28088282)
chr6 (212-255)||(34404107-34404150)
chr6 (212-262)||(281857-281907)
chr6 (213-263)||(4420653-4420703)
chr6 (213-247)||(9027604-9027638)
chr6 (221-259)||(9833128-9833166)
chr6 (229-263)||(19275662-19275696)
chr6 (213-263)||(31583689-31583739)
chr6 (221-263)||(32387073-32387115)
chr6 (218-263)||(24836217-24836262)
chr6 (213-262)||(34939755-34939804)
chr6 (213-245)||(1408277-1408309)
chr6 (213-245)||(2167168-2167200)
chr6 (213-245)||(2178801-2178833)
chr6 (223-263)||(2205610-2205650)
chr6 (213-241)||(3217200-3217228)
chr6 (219-263)||(30533799-30533843)
chr6 (219-259)||(32578002-32578042)
chr6 (215-263)||(33887840-33887888)
[»] chr7 (25 HSPs)
chr7 (541-625)||(36815373-36815457)
chr7 (468-517)||(36815473-36815522)
chr7 (213-263)||(4966166-4966216)
chr7 (213-263)||(6263374-6263423)
chr7 (213-263)||(7244690-7244740)
chr7 (213-263)||(24363611-24363661)
chr7 (213-263)||(26935567-26935617)
chr7 (358-403)||(36815597-36815642)
chr7 (219-263)||(12792579-12792623)
chr7 (219-259)||(12792709-12792749)
chr7 (216-263)||(45859539-45859586)
chr7 (221-263)||(12792642-12792684)
chr7 (213-259)||(28165105-28165151)
chr7 (221-263)||(39505966-39506008)
chr7 (213-263)||(44151490-44151540)
chr7 (213-263)||(44821969-44822019)
chr7 (213-255)||(46082054-46082096)
chr7 (212-245)||(12234898-12234931)
chr7 (214-263)||(25596043-25596092)
chr7 (212-245)||(34754819-34754852)
chr7 (219-260)||(40428568-40428609)
chr7 (219-263)||(12792514-12792558)
chr7 (219-263)||(27626139-27626183)
chr7 (216-260)||(29286804-29286848)
chr7 (219-263)||(46104583-46104627)
[»] chr1 (48 HSPs)
chr1 (213-263)||(11893603-11893653)
chr1 (219-263)||(5047156-5047200)
chr1 (216-263)||(35590905-35590952)
chr1 (213-263)||(16322859-16322909)
chr1 (213-263)||(37593694-37593744)
chr1 (213-248)||(48748325-48748360)
chr1 (213-263)||(10199418-10199468)
chr1 (213-263)||(12564509-12564559)
chr1 (213-259)||(27140492-27140538)
chr1 (213-263)||(27963380-27963430)
chr1 (213-263)||(28077079-28077129)
chr1 (213-263)||(34290246-34290296)
chr1 (213-259)||(47877123-47877169)
chr1 (214-263)||(45205078-45205127)
chr1 (210-254)||(44815310-44815354)
chr1 (211-258)||(625587-625634)
chr1 (212-259)||(3924638-3924685)
chr1 (212-243)||(4549260-4549291)
chr1 (213-248)||(43954055-43954090)
chr1 (221-263)||(5150947-5150989)
chr1 (213-263)||(5592695-5592745)
chr1 (213-263)||(6279409-6279459)
chr1 (213-263)||(6981502-6981552)
chr1 (213-263)||(7262528-7262578)
chr1 (213-263)||(11211128-11211178)
chr1 (213-259)||(12477297-12477343)
chr1 (213-263)||(14629976-14630026)
chr1 (217-259)||(23402045-23402087)
chr1 (213-263)||(26779935-26779985)
chr1 (213-259)||(26916215-26916261)
chr1 (213-263)||(35179149-35179199)
chr1 (213-243)||(39347977-39348007)
chr1 (213-263)||(47598431-47598481)
chr1 (217-262)||(26461955-26462000)
chr1 (213-262)||(32515451-32515500)
chr1 (212-245)||(33722410-33722443)
chr1 (212-245)||(49125872-49125905)
chr1 (216-257)||(49175635-49175676)
chr1 (213-245)||(6659542-6659574)
chr1 (213-245)||(15361068-15361100)
chr1 (213-261)||(16981946-16981994)
chr1 (219-263)||(23373328-23373372)
chr1 (213-245)||(23902077-23902109)
chr1 (213-257)||(28935886-28935930)
chr1 (213-257)||(30259496-30259540)
chr1 (213-245)||(33108632-33108664)
chr1 (219-263)||(43332494-43332538)
chr1 (213-241)||(47885043-47885071)
[»] chr8 (27 HSPs)
chr8 (219-263)||(11795102-11795146)
chr8 (213-263)||(28769349-28769399)
chr8 (210-263)||(4762519-4762572)
chr8 (213-270)||(25869276-25869333)
chr8 (213-263)||(42215092-42215142)
chr8 (219-261)||(42370377-42370419)
chr8 (213-246)||(6950349-6950382)
chr8 (213-245)||(30918141-30918173)
chr8 (219-263)||(39561557-39561601)
chr8 (213-248)||(11000586-11000621)
chr8 (212-263)||(26479795-26479846)
chr8 (212-263)||(27754414-27754465)
chr8 (220-259)||(39881769-39881808)
chr8 (221-259)||(4390070-4390108)
chr8 (213-263)||(11494156-11494206)
chr8 (213-263)||(11569467-11569517)
chr8 (213-263)||(30277255-30277305)
chr8 (225-263)||(33553250-33553288)
chr8 (215-245)||(41606915-41606945)
chr8 (216-249)||(7039834-7039867)
chr8 (212-245)||(11183573-11183606)
chr8 (215-264)||(13000436-13000485)
chr8 (214-263)||(44236834-44236883)
chr8 (219-263)||(7918789-7918833)
chr8 (213-245)||(8060697-8060729)
chr8 (219-263)||(14929154-14929198)
chr8 (212-248)||(37776713-37776749)
[»] chr2 (27 HSPs)
chr2 (213-263)||(7871653-7871703)
chr2 (214-263)||(42817387-42817436)
chr2 (211-263)||(6227761-6227813)
chr2 (213-259)||(1647250-1647296)
chr2 (213-263)||(35379026-35379076)
chr2 (207-263)||(27288641-27288697)
chr2 (213-264)||(11488286-11488337)
chr2 (212-271)||(15866677-15866736)
chr2 (212-263)||(40158728-40158779)
chr2 (213-263)||(1939342-1939392)
chr2 (214-248)||(11063218-11063252)
chr2 (213-263)||(15977995-15978045)
chr2 (213-263)||(16867749-16867799)
chr2 (213-263)||(34652046-34652096)
chr2 (213-263)||(35462769-35462819)
chr2 (221-259)||(40837453-40837491)
chr2 (213-263)||(41817178-41817228)
chr2 (213-263)||(43141881-43141931)
chr2 (221-263)||(43985021-43985063)
chr2 (212-245)||(1160749-1160782)
chr2 (213-258)||(28677669-28677714)
chr2 (212-245)||(41032964-41032997)
chr2 (215-263)||(8187465-8187513)
chr2 (213-245)||(18840824-18840856)
chr2 (219-263)||(24098112-24098156)
chr2 (213-245)||(25796210-25796242)
chr2 (219-263)||(43205319-43205363)
[»] chr4 (35 HSPs)
chr4 (214-259)||(2592320-2592365)
chr4 (214-258)||(27123363-27123407)
chr4 (213-263)||(11802544-11802594)
chr4 (213-263)||(23819099-23819149)
chr4 (213-263)||(29263380-29263430)
chr4 (213-263)||(37575946-37575996)
chr4 (213-263)||(45927359-45927409)
chr4 (213-263)||(46110213-46110263)
chr4 (213-263)||(53673668-53673718)
chr4 (212-265)||(35743290-35743343)
chr4 (213-245)||(5131260-5131292)
chr4 (215-263)||(18628555-18628603)
chr4 (212-263)||(32066095-32066146)
chr4 (212-263)||(35064865-35064916)
chr4 (220-263)||(47800633-47800676)
chr4 (212-263)||(55547053-55547104)
chr4 (213-271)||(6364151-6364209)
chr4 (213-259)||(6428032-6428078)
chr4 (213-263)||(7694020-7694070)
chr4 (214-260)||(14011247-14011293)
chr4 (213-263)||(17884078-17884128)
chr4 (213-259)||(19429723-19429769)
chr4 (213-263)||(34398695-34398745)
chr4 (213-263)||(43412371-43412421)
chr4 (213-243)||(43824313-43824343)
chr4 (213-263)||(49219149-49219199)
chr4 (214-263)||(28300310-28300359)
chr4 (219-263)||(825506-825550)
chr4 (213-245)||(1137740-1137772)
chr4 (212-240)||(3176113-3176141)
chr4 (219-263)||(21157778-21157822)
chr4 (213-245)||(24929521-24929553)
chr4 (227-263)||(28615344-28615380)
chr4 (213-245)||(33534179-33534211)
chr4 (213-245)||(45738105-45738137)
[»] scaffold0153 (2 HSPs)
scaffold0153 (212-245)||(6503-6536)
scaffold0153 (212-245)||(13523-13556)
[»] scaffold0654 (1 HSPs)
scaffold0654 (219-259)||(6653-6693)
[»] scaffold0254 (1 HSPs)
scaffold0254 (213-245)||(3501-3533)
[»] scaffold0014 (1 HSPs)
scaffold0014 (219-259)||(116572-116612)


Alignment Details
Target: chr5 (Bit Score: 492; Significance: 0; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 77 - 664
Target Start/End: Original strand, 20028364 - 20028973
Alignment:
Q  77 ataatgaacgattttgggagtgtggctgtttggatgaagttagggactgtttggatgaagctagggcatgtgattttggggaaatttactgttaacctag 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20028364 ataatgaacgattttgggagtgtggctgtttggatgaagttagggactgtttggatgaagctagggcatgtgatttaggggaaatttactgttaacctag 20028463  T
Q  177 gtggcctgtttggataaagctttatttgatgcttgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgcttaagtg- 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  20028464 gtggcctgtttggataaagctttatttgatgcttgtataagttgttttcagcttatttctataagctcttcataatagcttatgaaagttgcttaagtgg 20028563  T
Q  276 -----------gtttatccaaacaaggccctgtttttataagctaatatctgacataaagtagttctaccattgcctcatattgtgttgttcaccattga 364  Q
               ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20028564 ttaataaagtagtttatccaaacaaggccctgttttaataagctaatctctgacataaagtagttctaccattgcctcatattgtgttgttcaccattga 20028663  T
Q  365 aactctaccatgagctataactgcaccgtttatctttttagaaactaattgacaattctgtacatagcataagtagtattattttagctag-------tt 457  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       ||    
T  20028664 aactctaccatgagctgtaactgcaccgtttatctttttagaaactaattgacaattctgtacatagcttaagtagtattattttagctagttaatactt 20028763  T
Q  458 aatacttatactatgttgtattcttatcatggaatagaccaatttagaaaaggtatttattttttcctcaggtgcatgaaatagtcacgttggtatgatt 557  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20028764 aatacttatactatgttgtattcttatcatggaatagaccaatttagaaaaggtatttattttttcctcatgtgcatgaaatagtcacgttggtatgatt 20028863  T
Q  558 atgaataatgacataatataggaaggac--atatatacctcgtagagggaccttgcattgccaaatataatc-atggatccttacgttggtatgattatg 654  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20028864 atgaataatgacataatataggaaggacatatatatacctcgtagagggaccttgcattgccaaatataatcaatggatccttacgttggtatgattatg 20028963  T
Q  655 aaatacccac 664  Q
    ||||| ||||    
T  20028964 aaatagccac 20028973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 39607637 - 39607510
Alignment:
Q  121 gactgtttggatgaagctagggcatgtgattttggggaaatttactgttaacctaggtggcctgtttggataaagctttatttgatgcttgtataagttg 220  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39607637 gactgtttggatgaagctagggggtgttattttggggaaatttactgttaacctagg-ggcctgtttggataaagctttatttgatgcttgtataagttg 39607539  T
Q  221 ttttcagcttatttccataagctcttcat 249  Q
    ||||||||||||||| |||||||||||||    
T  39607538 ttttcagcttatttcgataagctcttcat 39607510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 18704045 - 18704096
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  18704045 tataagttgttttcagcttatttccataagatctttgtaatagcttatgaaa 18704096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 12521588 - 12521542
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  12521588 ataagctgttttcagcttatttccataagctcttcaaaatagcttat 12521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 38104866 - 38104917
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  38104866 tataagttgttttcagcttatttccataagctctctaagatagcttatgaaa 38104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 18906402 - 18906352
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||| ||||||| ||||  |||||||||||||    
T  18906402 ataagttgttttcagcttatttcgataagcttttcaagatagcttatgaaa 18906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 35963301 - 35963263
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataa 251  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  35963301 ataagttgttttcagcttatttccataagcttttcataa 35963263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 37588370 - 37588420
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||||||||||||||||||||| || |||| |||||||||    
T  37588370 ataagctgttttcagcttatttccataagctctccagaataacttatgaaa 37588420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 19138727 - 19138779
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttc--ataatagcttatgaaa 263  Q
    |||| |||||||||||||||||||||||||||| |  ||||||||||||||||    
T  19138727 ataaattgttttcagcttatttccataagctctccatataatagcttatgaaa 19138779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 32408603 - 32408652
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||| |||| ||||||||||||||||||||||  |||||||||||||    
T  32408603 taagttggtttctgcttatttccataagctcttcaggatagcttatgaaa 32408652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 5951977 - 5952013
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttca 248  Q
    |||||||||||||||||||||||||||||||| ||||    
T  5951977 tataagttgttttcagcttatttccataagctattca 5952013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 37690646 - 37690686
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataata 253  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  37690646 ataagctgttttcagcttatttccataagctctccataata 37690686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 1084134 - 1084181
Alignment:
Q  216 agttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||| |||||||||||||||||||||||| |||  ||||||||    
T  1084134 agttgtttttagcttatttccataagctcttcatgatatgttatgaaa 1084181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 11707116 - 11707065
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||| || ||||||| ||  |||||||||||||    
T  11707116 tataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaa 11707065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 12242723 - 12242770
Alignment:
Q  216 agttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||| ||||||||||||| ||  |||||||||||||    
T  12242723 agttgttttcagcttacttccataagctctccaagatagcttatgaaa 12242770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 19460627 - 19460580
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatg 260  Q
    ||||| ||||||||||| ||||||||||||||| ||| ||||||||||    
T  19460627 ataagatgttttcagctcatttccataagctctccatgatagcttatg 19460580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 2880557 - 2880603
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    ||||| |||||||||||||||||||||| ||||||  ||||||||||    
T  2880557 ataaggtgttttcagcttatttccataaactcttctgaatagcttat 2880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 6183497 - 6183455
Alignment:
Q  220 gttttcagcttatttccataagctcttcataatagcttatgaa 262  Q
    |||||||||||||||||||||||||| || || ||||||||||    
T  6183497 gttttcagcttatttccataagctctccaaaacagcttatgaa 6183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 8651363 - 8651412
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||| |||||||||||||||  || ||||||||||||||    
T  8651363 ataagttgttttcagcatatttccataagctc-ccagaatagcttatgaaa 8651412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 17258893 - 17258943
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||||||||||| |||||||||||||  |||| ||||||||    
T  17258893 ataagctgttttcagcttattttcataagctcttcaggatagtttatgaaa 17258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 32172705 - 32172663
Alignment:
Q  221 ttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||| || ||||||| |||||||||||||    
T  32172705 ttttcagcttatttccattagttcttcatgatagcttatgaaa 32172663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 33533549 - 33533599
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||| |||||||||||||||||| ||  ||||||| |||||    
T  33533549 ataagttgttttcaacttatttccataagctctccaagatagcttgtgaaa 33533599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 36639582 - 36639532
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||  ||||||| |||||||||||||  |||||||||||||    
T  36639582 ataagttgttttcctcttattttcataagctcttcaagatagcttatgaaa 36639532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 37526209 - 37526259
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||||||||||||||||||||| || || | |||||||||    
T  37526209 ataagctgttttcagcttatttccataagctctccagaacaacttatgaaa 37526259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 37611225 - 37611275
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||| ||||||||||||||||| ||  |||||||||||||    
T  37611225 ataagctgttttcaggttatttccataagctctccaagatagcttatgaaa 37611275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 37787955 - 37788005
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||| ||||||||||||||||| ||  |||||||||||||    
T  37787955 ataagctgttttcaggttatttccataagctctccaagatagcttatgaaa 37788005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 18902855 - 18902806
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaa 262  Q
    ||||| ||||| ||||||||||||||||||||  || |||||||||||||    
T  18902855 ataagctgtttgcagcttatttccataagctccccaaaatagcttatgaa 18902806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 35553207 - 35553248
Alignment:
Q  222 tttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||| || |||||| |||||||    
T  35553207 tttcagcttatttccataagctctccagaatagcgtatgaaa 35553248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 40590819 - 40590786
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||| ||||||||||||||||||||    
T  40590819 tataagttgttttgagcttatttccataagctct 40590786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 985666 - 985626
Alignment:
Q  220 gttttcagcttatttccataagctcttcataatagcttatg 260  Q
    ||||||||||||||||||||  |||||||| ||||||||||    
T  985666 gttttcagcttatttccatagtctcttcatgatagcttatg 985626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 6109543 - 6109511
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||||||||||||| |||||||    
T  6109543 ataagttgttttcagcttatttccaaaagctct 6109511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 40205090 - 40205134
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||| ||||||||| ||  |||||||||||||    
T  40205090 tgttttcagcttatttctataagctctccaggatagcttatgaaa 40205134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 286; Significance: 1e-160; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 328 - 664
Target Start/End: Original strand, 33813 - 34159
Alignment:
Q  328 ttctaccattgcctcatattgtgttgttcaccattgaaactctaccatgagctataactgcaccgtttatctttttagaaactaattgacaattctgtac 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33813 ttctaccattgcctcatattgtgttgttcaccattgaaactctaccatgagctgtaactgcaccgtttatctttttagaaactaattgacaattctgtac 33912  T
Q  428 atagcataagtagtattattttagctagttaa-------tacttatactatgttgtattcttatcatggaatagaccaatttagaaaaggtatttatttt 520  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33913 atagcataagtagtatcattttagctagttaatacttaatacttatactatgttgtattcttatcatggaatagaccaatttagaaaaggtatttatttt 34012  T
Q  521 ttcctcaggtgcatgaaatagtcacgttggtatgattatgaataatgacataatataggaaggac--atatatacctcgtagagggaccttgcattgcca 618  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  34013 ttcctcatgtgcatgaaatagtcacgttggtatgattatgaataatgacataatataggaaggacatatatatacctcgtagagggaccttgcattgcca 34112  T
Q  619 aatataatc-atggatccttacgttggtatgattatgaaatacccac 664  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  34113 aatataatcaatggatccttacgttggtatgattatgaaatagccac 34159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 77 - 322
Target Start/End: Original strand, 33501 - 33758
Alignment:
Q  77 ataatgaacgattttgggagtgtggctgtttggatgaagttagggactgtttggatgaagctagggcatgtgattttggggaaatttactgttaacctag 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33501 ataatgaacgattttgggagtgtggctgtttggatgaagttagggactgtttggatgaagctagggcatgcgattttggggaaatttactgttaacctag 33600  T
Q  177 gtggcctgtttggataaagctttatttgatgcttgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgcttaagtg- 275  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  33601 gtggccagtttggataaagctttatttgatgcttgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgcttaagtgg 33700  T
Q  276 -----------gtttatccaaacaaggccctgtttttataagctaatatctgacataa 322  Q
               |||||||||||||||||||||||||||||||||||||||||||||||    
T  33701 ttaataaagtagtttatccaaacaaggccctgtttttataagctaatatctgacataa 33758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 286; Significance: 1e-160; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 328 - 664
Target Start/End: Complemental strand, 13371001 - 13370655
Alignment:
Q  328 ttctaccattgcctcatattgtgttgttcaccattgaaactctaccatgagctataactgcaccgtttatctttttagaaactaattgacaattctgtac 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13371001 ttctaccattgcctcatattgtgttgttcaccattgaaactctaccatgagctgtaactgcaccgtttatctttttagaaactaattgacaattctgtac 13370902  T
Q  428 atagcataagtagtattattttagctagttaatactta-------tactatgttgtattcttatcatggaatagaccaatttagaaaaggtatttatttt 520  Q
    |||||||||||||||| |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13370901 atagcataagtagtatcattttagctagttaatacttaatacttatactatgttgtattcttatcatggaatagaccaatttagaaaaggtatttatttt 13370802  T
Q  521 ttcctcaggtgcatgaaatagtcacgttggtatgattatgaataatgacataatataggaaggacata--tatacctcgtagagggaccttgcattgcca 618  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  13370801 ttcctcatgtgcatgaaatagtcacgttggtatgattatgaataatgacataatataggaaggacatatatatacctcgtagagggaccttgcattgcca 13370702  T
Q  619 aatataatc-atggatccttacgttggtatgattatgaaatacccac 664  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  13370701 aatataatcaatggatccttacgttggtatgattatgaaatagccac 13370655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 77 - 322
Target Start/End: Complemental strand, 13371313 - 13371056
Alignment:
Q  77 ataatgaacgattttgggagtgtggctgtttggatgaagttagggactgtttggatgaagctagggcatgtgattttggggaaatttactgttaacctag 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  13371313 ataatgaacgattttgggagtgtggctgtttggatgaagttagggactgtttggatgaacctagggcatgcaattttggggaaatttactgttaacctag 13371214  T
Q  177 gtggcctgtttggataaagctttatttgatgcttgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgcttaagtg- 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13371213 gtggcctgtttggataaagctttatttgatgcttgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgcttaagtgg 13371114  T
Q  276 -----------gtttatccaaacaaggccctgtttttataagctaatatctgacataa 322  Q
               |||||||||||||||||| ||||||||||||||||||||||||||||    
T  13371113 ttaataaagtagtttatccaaacaaggccgtgtttttataagctaatatctgacataa 13371056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 5292529 - 5292570
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataata 253  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  5292529 tataagttgttttcagcttatttccataagctctccataata 5292570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 26542598 - 26542547
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||| ||||||||||||| |||| |||||||||||||||||    
T  26542598 tataacttgttttcaacttatttccataaactctccataatagcttatgaaa 26542547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 27792933 - 27792882
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||| ||||||||| ||| |||| ||||||||    
T  27792933 tataagttgttttcagcttatttctataagctctacatgatagtttatgaaa 27792882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 54180790 - 54180840
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  54180790 ataagttgtttttagcttatttatataagctctccataatagcttatgaaa 54180840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 14548737 - 14548781
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||||| || |||| |||||||||    
T  14548737 tgttttcagcttatttccataagctctccagaataacttatgaaa 14548781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 21862185 - 21862217
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||||||||||||||    
T  21862185 ataagttgttttcagcttatttccataagctct 21862217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 45432949 - 45432981
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||||||||||||||    
T  45432949 ataagttgttttcagcttatttccataagctct 45432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 49546493 - 49546541
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatg 260  Q
    ||||||||||||||||| |||||| ||||||||| ||| ||||||||||    
T  49546493 tataagttgttttcagcatatttcaataagctctccatgatagcttatg 49546541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 54137636 - 54137684
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatga 261  Q
    |||||||||| |||||||||||||||||||||  || ||||||||||||    
T  54137636 ataagttgttatcagcttatttccataagctcaccagaatagcttatga 54137684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 2071109 - 2071066
Alignment:
Q  220 gttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||    
T  2071109 gtttttagcttattttcataagctcttcatcatagcttatgaaa 2071066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 9279335 - 9279386
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||| |||||||||||||||||| ||| |||||||| |||| ||||||||    
T  9279335 tataagctgttttcagcttatttccttaaactcttcatgatagtttatgaaa 9279386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 23793645 - 23793594
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||| ||||||| | ||  |||||||||||||    
T  23793645 tataagttgttttcagcttatttctataagctttccaagatagcttatgaaa 23793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 41633421 - 41633370
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||||||||||| |||||||||| || ||||||| ||||||    
T  41633421 tataaattgttttcagcttattttcataagctctccaaaatagctgatgaaa 41633370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 12985355 - 12985405
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||| ||||||||||||||| |||| |  |||||||||||||    
T  12985355 ataagttgttttcggcttatttccataagttcttgaggatagcttatgaaa 12985405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 23785315 - 23785265
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||| |||||||||||||| ||| | ||||| |||||    
T  23785315 ataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaa 23785265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 34414794 - 34414844
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||| ||||| |||| ||| |||| ||||||||    
T  34414794 ataagttgttttcagcttattttcataaactctccatgatagtttatgaaa 34414844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 36200156 - 36200110
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||||||| |||||| ||  |||||||||    
T  36200156 ataagttgttttcagcttatttccatgagctctacaggatagcttat 36200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 37273194 - 37273144
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||| |||||||||||||| ||| ||  |||||||||||||    
T  37273194 ataagttgttttcaacttatttccataagttctccaagatagcttatgaaa 37273144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 243
Target Start/End: Complemental strand, 38462341 - 38462311
Alignment:
Q  213 ataagttgttttcagcttatttccataagct 243  Q
    |||||||||||||||||||||||||||||||    
T  38462341 ataagttgttttcagcttatttccataagct 38462311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 20502083 - 20502128
Alignment:
Q  218 ttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||  |||||||||||||  |||||||||||||    
T  20502083 ttgttttcagcttattctcataagctcttcaggatagcttatgaaa 20502128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 23315676 - 23315639
Alignment:
Q  223 ttcagcttatttccataagctcttcataatagcttatg 260  Q
    |||||||||||||||||||||||| | |||||||||||    
T  23315676 ttcagcttatttccataagctctttagaatagcttatg 23315639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 52614226 - 52614181
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||||| ||| ||| |||| ||||||||    
T  52614226 taagttgttttcagcttatttccacaagttctacatagtagcttat 52614181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 24887299 - 24887343
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||| ||||||||||| ||  |||||||||||||    
T  24887299 tgttttcagcttattcccataagctctccaggatagcttatgaaa 24887343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 37825182 - 37825150
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||| |||||||||||||||||    
T  37825182 ataagttgttttcaggttatttccataagctct 37825150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 43115116 - 43115084
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||| ||||||||||||||||||||||||||||    
T  43115116 ataacttgttttcagcttatttccataagctct 43115084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 328 - 664
Target Start/End: Original strand, 20512830 - 20513176
Alignment:
Q  328 ttctaccattgcctcatattgtgttgttcaccattgaaactctaccatgagctataactgcaccgtttatctttttagaaactaattgacaattctgtac 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  20512830 ttctaccattgcctcatattgtgttgttcaccattgaaactctaccatgaggagtaactgcaccgtttatctttttagaaactaattgacaattctgtac 20512929  T
Q  428 atagcataagtagtattattttagctagttaa-------tacttatactatgttgtattcttatcatggaatagaccaatttagaaaaggtatttatttt 520  Q
    |||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20512930 atagcataagtagtatcattttagctagttaatacttaatacttatactatgttgtattcttatcatggaatagaccaatttagaaaaggtatttatttt 20513029  T
Q  521 ttcctcaggtgcatgaaatagtcacgttggtatgattatgaataatgacataatataggaaggac--atatatacctcgtagagggaccttgcattgcca 618  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||     
T  20513030 ttcctcatgtgcatgaaatagtcacgttggtatgattatgaataatgacataatataggaaggacatatatatacctcgtagagggaccttgcattgccg 20513129  T
Q  619 aatataatc-atggatccttacgttggtatgattatgaaatacccac 664  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  20513130 aatataatcaatggatccttacgttggtatgattatgaaatagccac 20513176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 77 - 322
Target Start/End: Original strand, 20512518 - 20512775
Alignment:
Q  77 ataatgaacgattttgggagtgtggctgtttggatgaagttagggactgtttggatgaagctagggcatgtgattttggggaaatttactgttaacctag 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  20512518 ataatgaacgattttgggagtgtggctgtttggatgaagttagggactgtttggatgaagctggggcatgcgattttggggaaatttactgttaacctag 20512617  T
Q  177 gtggcctgtttggataaagctttatttgatgcttgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgcttaagtg- 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20512618 gtggcctgtttggataaagctttatttgatgcttgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgcttaagtgg 20512717  T
Q  276 -----------gtttatccaaacaaggccctgtttttataagctaatatctgacataa 322  Q
               |||||||||||||||||||||||||||||||||||||||||||||||    
T  20512718 ttaataaagtagtttatccaaacaaggccctgtttttataagctaatatctgacataa 20512775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 10154286 - 10154223
Alignment:
Q  208 cttgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgctta 271  Q
    |||||||||||||||||||| ||||||||||||||| |||||  |||| ||||||||| |||||    
T  10154286 cttgtataagttgttttcagtttatttccataagcttttcatgctagcctatgaaagtagctta 10154223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 2460162 - 2460206
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagctta 258  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  2460162 taagttgttttcaacttatttccataagctctccataatagctta 2460206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 6537007 - 6536972
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttca 248  Q
    ||||||||||||||||||||||||||||||||||||    
T  6537007 ataagttgttttcagcttatttccataagctcttca 6536972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 7785753 - 7785796
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagc 255  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  7785753 tataagttgttttcagcttatttccataagctctccaaaatagc 7785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 34939572 - 34939526
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttatg 260  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||||    
T  34939572 taagttgttttcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 27909648 - 27909680
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||||||||||||||    
T  27909648 ataagttgttttcagcttatttccataagctct 27909680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 1401170 - 1401119
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||| ||||||||| |||||||||||| ||| |||||||||||||    
T  1401170 tataacttgttctcagcttatctccataagctctccatgatagcttatgaaa 1401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 245
Target Start/End: Original strand, 7931800 - 7931831
Alignment:
Q  214 taagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||||||||||||||||||||    
T  7931800 taagttgttttcagcttatttccataagctct 7931831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 13908522 - 13908479
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagctt 257  Q
    |||| |||||||||||||||| |||||||||||||| |||||||    
T  13908522 taagctgttttcagcttattttcataagctcttcatgatagctt 13908479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 27998425 - 27998472
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||||| |||| |||||||| |||| ||||    
T  27998425 tataagttgttttcagcttatttctataaactcttcattataggttat 27998472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 28088231 - 28088282
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||| |||||||| ||||||||||||| |||||| ||| |||||||||||||    
T  28088231 tataggttgttttgagcttatttccatgagctctccatgatagcttatgaaa 28088282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 34404150 - 34404107
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagc 255  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||    
T  34404150 tataagttgttttcaacttatttctataagctctccataatagc 34404107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 281857 - 281907
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaa 262  Q
    ||||||||||||||||||||||||||| ||||||  |  ||||||||||||    
T  281857 tataagttgttttcagcttatttccatgagctctctaggatagcttatgaa 281907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 4420703 - 4420653
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||||||||||||||||||||| ||  |||||||| ||||    
T  4420703 ataagctgttttcagcttatttccataagctctccaagatagcttaggaaa 4420653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 9027638 - 9027604
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttc 247  Q
    |||||||||||||||||||||| ||||||||||||    
T  9027638 ataagttgttttcagcttattttcataagctcttc 9027604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 9833128 - 9833166
Alignment:
Q  221 ttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  9833128 ttttcaacttatttccataagctcttcatgatagcttat 9833166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 19275662 - 19275696
Alignment:
Q  229 ttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||| |||||||||||||    
T  19275662 ttatttccataagctcttcatgatagcttatgaaa 19275696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 31583739 - 31583689
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||| |||||||||||||||| |||   |||||||||||||    
T  31583739 ataagttgttttcaacttatttccataagcttttcgggatagcttatgaaa 31583689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 32387073 - 32387115
Alignment:
Q  221 ttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||| ||||||||||||| |||| |||||||||    
T  32387073 ttttcagcttattttcataagctcttcagaataacttatgaaa 32387115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 24836217 - 24836262
Alignment:
Q  218 ttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||| ||||||||||||||||||||| ||| |||||||| ||||    
T  24836217 ttgtttccagcttatttccataagctctccatgatagcttacgaaa 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 34939804 - 34939755
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaa 262  Q
    |||| ||||||||||||||||||||||| |||| ||  ||||||||||||    
T  34939804 ataaattgttttcagcttatttccataaactctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 1408277 - 1408309
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||| ||||||||||||||||||||||||||||    
T  1408277 ataacttgttttcagcttatttccataagctct 1408309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 2167168 - 2167200
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||||||||| ||||    
T  2167168 ataagttgttttcagcttatttccataatctct 2167200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 2178801 - 2178833
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||||||||| ||||    
T  2178801 ataagttgttttcagcttatttccataatctct 2178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 2205610 - 2205650
Alignment:
Q  223 ttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||| ||  |||||||||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaa 2205650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 241
Target Start/End: Original strand, 3217200 - 3217228
Alignment:
Q  213 ataagttgttttcagcttatttccataag 241  Q
    |||||||||||||||||||||||||||||    
T  3217200 ataagttgttttcagcttatttccataag 3217228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 30533843 - 30533799
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||| | ||||||  |||||||||||||||||||||||||||    
T  30533843 tgttttcggattatttgaataagctcttcataatagcttatgaaa 30533799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 32578002 - 32578042
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttat 259  Q
    ||||||||||||||||||||| ||||||||  |||||||||    
T  32578002 tgttttcagcttatttccatatgctcttcaggatagcttat 32578042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 33887888 - 33887840
Alignment:
Q  215 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||| |||||||||||||||  ||||  |||||||||||||    
T  33887888 aagttgttttcaacttatttccataagcatttcaggatagcttatgaaa 33887840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 5e-33; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 541 - 625
Target Start/End: Complemental strand, 36815457 - 36815373
Alignment:
Q  541 gtcacgttggtatgattatgaataatgacataatataggaaggacatatatacctcgtagagggaccttgcattgccaaatataa 625  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  36815457 gtcacgttggtatgattatgaataatgacatgatataggaaggacatatatacctcatagagtgaccttgcattgccaaatataa 36815373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 517
Target Start/End: Complemental strand, 36815522 - 36815473
Alignment:
Q  468 ctatgttgtattcttatcatggaatagaccaatttagaaaaggtatttat 517  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  36815522 ctatgttgtattcttatcatagaataaaccaatatagaaaaggtatttat 36815473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 4966216 - 4966166
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||| ||||||||||||||||||||  || ||||||||||    
T  4966216 ataagttgttttcagtttatttccataagctcttcaggatggcttatgaaa 4966166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 6263374 - 6263423
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  6263374 ataagttgtttt-agcttatttccatatgctctccataatagcttatgaaa 6263423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 7244740 - 7244690
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||| |||||||||| ||  |||||||||||||    
T  7244740 ataagttgttttcagcttattttcataagctctccaatatagcttatgaaa 7244690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 24363611 - 24363661
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||||||| |||| ||  |||||||||||||    
T  24363611 ataagttgttttcagcttatttccataacctctccaggatagcttatgaaa 24363661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 26935567 - 26935617
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||||||||||||||||||||||| | ||||| ||||||||    
T  26935567 ataagctgttttcagcttatttccataagctctttagaatagattatgaaa 26935617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 36815642 - 36815597
Alignment:
Q  358 ccattgaaactctaccatgagctataactgcaccgtttatcttttt 403  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||    
T  36815642 ccattgaaactcttccatgagctgtaactgcaccgtttatgttttt 36815597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 12792579 - 12792623
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||| |||||||||||||  |||||||||||||    
T  12792579 tgttttcagcttattttcataagctcttcaagatagcttatgaaa 12792623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 12792709 - 12792749
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  12792709 tgttttcagcttatttccgtaagctcttcagaatagcttat 12792749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 45859539 - 45859586
Alignment:
Q  216 agttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||| ||||||||||||| ||||  |||||||    
T  45859539 agttgttttcagcttatttctataagctcttcatgatagtctatgaaa 45859586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 12792642 - 12792684
Alignment:
Q  221 ttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||| ||||||||  |||||||||||||    
T  12792642 ttttcagcttatttccatatgctcttcaagatagcttatgaaa 12792684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 28165151 - 28165105
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||||    
T  28165151 ataagctgttttcaacttatttccataagctctccatgatagcttat 28165105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 39506008 - 39505966
Alignment:
Q  221 ttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||| |||| || ||||||||||||||    
T  39506008 ttttcagcttatttccataaactctccagaatagcttatgaaa 39505966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 44151490 - 44151540
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||||||||||||||||||| ||||  |||| ||||||||    
T  44151490 ataagatgttttcagcttatttccataagcttttcaagatagtttatgaaa 44151540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 44822019 - 44821969
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||| ||||||| |||||| ||| || ||||||||||||||    
T  44822019 ataagttgttttcaacttattttcataagttctccagaatagcttatgaaa 44821969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 46082096 - 46082054
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagc 255  Q
    |||||||||||||||||||||| |||||||||| || ||||||    
T  46082096 ataagttgttttcagcttattttcataagctctccagaatagc 46082054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 12234898 - 12234931
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    |||||| |||||||||||||||||||||||||||    
T  12234898 tataagctgttttcagcttatttccataagctct 12234931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 25596092 - 25596043
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||| ||||||| |||||||||| ||  |||||||||||||    
T  25596092 taagttgttttcaacttattttcataagctctccaagatagcttatgaaa 25596043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 34754819 - 34754852
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||||||||||||||| ||||||    
T  34754819 tataagttgttttcagcttatttccatcagctct 34754852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 40428609 - 40428568
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatg 260  Q
    |||||||||||||||||||||||||||| |  ||||||||||    
T  40428609 tgttttcagcttatttccataagctctttaggatagcttatg 40428568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 12792514 - 12792558
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||    
T  12792514 tgttatcagcttatttcaataagctcttcaagatagcttatgaaa 12792558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 27626139 - 27626183
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||| | |||||||||||||||||||||| |||||||| ||||    
T  27626139 tgttttaaacttatttccataagctcttcatgatagcttaggaaa 27626183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 29286848 - 29286804
Alignment:
Q  216 agttgttttcagcttatttccataagctcttcataatagcttatg 260  Q
    ||||||||||||||||||| |||||||| |||| |||| ||||||    
T  29286848 agttgttttcagcttatttacataagcttttcaaaataacttatg 29286804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 46104583 - 46104627
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||||| |||||||||||||  |||||||||||||    
T  46104583 tgtttccagcttattttcataagctcttcagcatagcttatgaaa 46104627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 11893603 - 11893653
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  11893603 ataagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 11893653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 5047200 - 5047156
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  5047200 tgttttcagcttatttccataagctcttcatgatagcttatgaaa 5047156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 35590905 - 35590952
Alignment:
Q  216 agttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  35590905 agttgttttcagcttatttccataagctctccatgatagcttatgaaa 35590952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 16322909 - 16322859
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  16322909 ataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaa 16322859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 37593694 - 37593744
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  37593694 ataagctgttttcagcttattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 48748325 - 48748360
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttca 248  Q
    ||||||||||||||||||||||||||||||||||||    
T  48748325 ataagttgttttcagcttatttccataagctcttca 48748360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 10199418 - 10199468
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||| ||||||||||  | ||||||||||||||    
T  10199418 ataagttgttttcagcttattttcataagctctctaaaatagcttatgaaa 10199468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 12564509 - 12564559
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||||||| ||| ||  |||||||||||||    
T  12564509 ataagttgttttcagcttatttccataagttctccaagatagcttatgaaa 12564559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 27140538 - 27140492
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||    
T  27140538 ataagttgttttcagcttatttgcataagctctccatgatagcttat 27140492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 27963380 - 27963430
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  27963380 ataagttgtttttagcttatttatataagctctccataatagcttatgaaa 27963430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 28077079 - 28077129
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||| |||||||||  | ||||||||||||||    
T  28077079 ataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaa 28077129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 34290296 - 34290246
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||| |||||| ||||||  |||||||||||||    
T  34290296 ataagttgttttcagcttattttcataagttcttcaagatagcttatgaaa 34290246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 47877169 - 47877123
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||    
T  47877169 ataagttgttttcagcttattttcataagctttccataatagcttat 47877123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 45205127 - 45205078
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||| | |||| ||| |||||||||||||    
T  45205127 taagttgttttcagcttatttccatgaactctacatgatagcttatgaaa 45205078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 44815310 - 44815354
Alignment:
Q  210 tgtataagttgttttcagcttatttccataagctcttcataatag 254  Q
    ||||||| |||||||||||||||||||||||||||| || |||||    
T  44815310 tgtataaattgttttcagcttatttccataagctctccaaaatag 44815354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 625634 - 625587
Alignment:
Q  211 gtataagttgttttcagcttatttccataagctcttcataatagctta 258  Q
    |||||||||||||||| |||||||| |||||||||||| |||| ||||    
T  625634 gtataagttgttttcaacttatttctataagctcttcagaatatctta 625587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 3924685 - 3924638
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||| |||||||||||||| |||||||  |||||||||    
T  3924685 tataagttgttttcggcttatttccataaactcttcaggatagcttat 3924638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 243
Target Start/End: Complemental strand, 4549291 - 4549260
Alignment:
Q  212 tataagttgttttcagcttatttccataagct 243  Q
    ||||||||||||||||||||||||||||||||    
T  4549291 tataagttgttttcagcttatttccataagct 4549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 43954055 - 43954090
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttca 248  Q
    |||||||||||||||||||| |||||||||||||||    
T  43954055 ataagttgttttcagcttatctccataagctcttca 43954090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 5150989 - 5150947
Alignment:
Q  221 ttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||| |||||||| ||||||||||||| |||||||||||||    
T  5150989 ttttcaacttatttctataagctcttcatgatagcttatgaaa 5150947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 5592695 - 5592745
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||| |||||||||| ||||||||||| | | ||||||||||||    
T  5592695 ataagttgtttccagcttattttcataagctcttaagactagcttatgaaa 5592745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 6279459 - 6279409
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||| ||||||||||||||||  |  |||||||||||||    
T  6279459 ataagttgttttcagcgtatttccataagctctctaggatagcttatgaaa 6279409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 6981552 - 6981502
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||| ||||||||||| |||| || ||||||||| ||||    
T  6981552 ataagttgttttcagcatatttccataaactctccagaatagcttaggaaa 6981502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 7262528 - 7262578
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||| |||||||||| ||||||||||  |||||||||||||    
T  7262528 ataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaa 7262578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 11211178 - 11211128
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||| | ||||||||||||| |||| ||||| |||||||||||    
T  11211178 ataagttgtttttaacttatttccataaactctccataacagcttatgaaa 11211128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 12477297 - 12477343
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||||    
T  12477297 ataagttgttttcagcttatttccatacactctccatgatagcttat 12477343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 14629976 - 14630026
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||||||  ||| ||  |||||||||||||    
T  14629976 ataagttgttttcagcttatttccataaagtctccaagatagcttatgaaa 14630026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 23402087 - 23402045
Alignment:
Q  217 gttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||||||||||  || |||||||||    
T  23402087 gttgttttcagcttatttccataagctctcgatgatagcttat 23402045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 26779935 - 26779985
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||| ||||||| |||||| ||||||  |||||||||||||    
T  26779935 ataagttgttttcaacttattttcataagttcttcaagatagcttatgaaa 26779985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 26916261 - 26916215
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    ||||||||||| ||||||||||||||||||||| || |||| |||||    
T  26916261 ataagttgtttccagcttatttccataagctctccagaataacttat 26916215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 35179199 - 35179149
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||||||||||| |||||| ||| ||||||| |||||||||    
T  35179199 ataagctgttttcagcttattttcataagttctccataataacttatgaaa 35179149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 39347977 - 39348007
Alignment:
Q  213 ataagttgttttcagcttatttccataagct 243  Q
    |||||||||||||||||||||||||||||||    
T  39347977 ataagttgttttcagcttatttccataagct 39348007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 47598431 - 47598481
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||| || ||||||||||| ||  |||||||||||||    
T  47598431 ataagttgttttcagcttgttgccataagctctccaggatagcttatgaaa 47598481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 26461955 - 26462000
Alignment:
Q  217 gttgttttcagcttatttccataagctcttcataatagcttatgaa 262  Q
    |||||||||||||||||| |||||||||| ||  ||||||||||||    
T  26461955 gttgttttcagcttattttcataagctctgcaggatagcttatgaa 26462000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 32515451 - 32515500
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaa 262  Q
    |||||||||||||| ||||| || ||||||||| ||| ||||||||||||    
T  32515451 ataagttgttttcaacttatatctataagctctccatgatagcttatgaa 32515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 33722410 - 33722443
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||||||||||||||||| ||||    
T  33722410 tataagttgttttcagcttatttccataacctct 33722443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 49125905 - 49125872
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||||||| ||||||||||||||    
T  49125905 tataagttgttttcagcttgtttccataagctct 49125872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 49175676 - 49175635
Alignment:
Q  216 agttgttttcagcttatttccataagctcttcataatagctt 257  Q
    |||||||||||||||||||||||||| ||| ||| |||||||    
T  49175676 agttgttttcagcttatttccataagttctacatgatagctt 49175635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 6659574 - 6659542
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||||||||||| |||||||||    
T  6659574 ataagttgttttcagcttatttcgataagctct 6659542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 15361100 - 15361068
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||| ||||||||||    
T  15361100 ataagttgttttcagcttattttcataagctct 15361068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 16981946 - 16981994
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatga 261  Q
    |||||||||||| |||||||||  ||||||||| ||| |||||||||||    
T  16981946 ataagttgtttttagcttatttatataagctctccatgatagcttatga 16981994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 23373328 - 23373372
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||  |||||||||||  |||||||||||||    
T  23373328 tgttttcagcttatttctgtaagctcttcaggatagcttatgaaa 23373372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 23902077 - 23902109
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||||||| |||||||||||||    
T  23902077 ataagttgttttcagcttacttccataagctct 23902109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 28935886 - 28935930
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagctt 257  Q
    ||||||| |||| |||||||||||||||||||||||  |||||||    
T  28935886 ataagttttttttagcttatttccataagctcttcaggatagctt 28935930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 30259496 - 30259540
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagctt 257  Q
    |||| ||||||||| |||||||||||||||||| ||| |||||||    
T  30259496 ataaattgttttcaacttatttccataagctctccatgatagctt 30259540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 33108632 - 33108664
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||| ||||||||||||||||||    
T  33108632 ataagttgttttcaacttatttccataagctct 33108664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 43332538 - 43332494
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||    
T  43332538 tgttttcagcttattttaataagctcttcaagatagcttatgaaa 43332494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 241
Target Start/End: Original strand, 47885043 - 47885071
Alignment:
Q  213 ataagttgttttcagcttatttccataag 241  Q
    |||||||||||||||||||||||||||||    
T  47885043 ataagttgttttcagcttatttccataag 47885071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 11795146 - 11795102
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  11795146 tgttttcagcttatttccataagctctccataatagcttatgaaa 11795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 28769349 - 28769399
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  28769349 ataagttgttttcagcttatttccataaactctccaaaatagcttatgaaa 28769399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 4762572 - 4762519
Alignment:
Q  210 tgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||| ||||||||||||||||| |||||||||||||  |||||||||||||    
T  4762572 tgtataaattgttttcagcttatttacataagctcttcaagatagcttatgaaa 4762519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 25869276 - 25869333
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgctt 270  Q
    |||||||||||||||||||||||||||| |||| ||| ||||| ||||||| ||||||    
T  25869276 ataagttgttttcagcttatttccataaactctccatgatagcctatgaaaattgctt 25869333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 42215092 - 42215142
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||| |||||||||| ||  |||||||||||||    
T  42215092 ataagttgttttcagcttatttacataagctctccaagatagcttatgaaa 42215142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 42370377 - 42370419
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatga 261  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  42370377 tgttttcagcttatttccataaactcttcatgatagcttatga 42370419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 6950382 - 6950349
Alignment:
Q  213 ataagttgttttcagcttatttccataagctctt 246  Q
    ||||||||||||||||||||||||||||||||||    
T  6950382 ataagttgttttcagcttatttccataagctctt 6950349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 30918173 - 30918141
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||||||||||||||    
T  30918173 ataagttgttttcagcttatttccataagctct 30918141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 39561557 - 39561601
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||    
T  39561557 tgttttcagcttatttccataagcttttcatgatagcttacgaaa 39561601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 11000586 - 11000621
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttca 248  Q
    ||||||||| ||||||||||||||||||||||||||    
T  11000586 ataagttgtcttcagcttatttccataagctcttca 11000621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 26479846 - 26479795
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||| |||||||| |||||||||||||||| || ||||| ||||||||    
T  26479846 tataagtttttttcagcgtatttccataagctctccagaataggttatgaaa 26479795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 27754465 - 27754414
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||  |||||||||||| |||||||||| || ||||||||||||||    
T  27754465 tataagttgcgttcagcttattttcataagctctccaaaatagcttatgaaa 27754414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 39881769 - 39881808
Alignment:
Q  220 gttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  39881769 gttttcagcttatttccataagctctccatgatagcttat 39881808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 4390070 - 4390108
Alignment:
Q  221 ttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  4390070 ttttcagcttatttccataagctcatcaaaatagcttat 4390108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 11494206 - 11494156
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| || ||||||||||||| |||||||||||||  |||||||||||||    
T  11494206 ataagctgctttcagcttattttcataagctcttcaagatagcttatgaaa 11494156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 11569467 - 11569517
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||| || || |||| ||| |||||||||||||    
T  11569467 ataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaa 11569517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 30277255 - 30277305
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||||||| ||||  |  |||||||||||||    
T  30277255 ataagttgttttcagcttatttccataaactctctaggatagcttatgaaa 30277305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 33553288 - 33553250
Alignment:
Q  225 cagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  33553288 cagcttatttccataagctcttcaagatagcttatgaaa 33553250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 215 - 245
Target Start/End: Original strand, 41606915 - 41606945
Alignment:
Q  215 aagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||||||||||||    
T  41606915 aagttgttttcagcttatttccataagctct 41606945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 7039867 - 7039834
Alignment:
Q  216 agttgttttcagcttatttccataagctcttcat 249  Q
    ||||||||||| ||||||||||||||||||||||    
T  7039867 agttgttttcaacttatttccataagctcttcat 7039834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 11183606 - 11183573
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    |||||| |||||||||||||||||||||||||||    
T  11183606 tataagctgttttcagcttatttccataagctct 11183573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 13000436 - 13000485
Alignment:
Q  215 aagttgttttcagcttatttccataagctcttcataatagcttatgaaag 264  Q
    ||||||||||||||||||||||||||||| | ||| | || |||||||||    
T  13000436 aagttgttttcagcttatttccataagctttgcatgacagtttatgaaag 13000485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 44236834 - 44236883
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||| |||||||||||||| |||||||||| ||  |||||||||||||    
T  44236834 taagttattttcagcttattttcataagctctccaatatagcttatgaaa 44236883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 7918789 - 7918833
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||| ||||||| ||  |||||||||||||    
T  7918789 tgttttcagcttatttccacaagctctacaagatagcttatgaaa 7918833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 8060729 - 8060697
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    ||||||| |||||||||||||||||||||||||    
T  8060729 ataagttattttcagcttatttccataagctct 8060697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 14929154 - 14929198
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||| ||||||| ||  |||||||||||||    
T  14929154 tgttttcagcttatttccaaaagctctgcaacatagcttatgaaa 14929198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 37776713 - 37776749
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttca 248  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  37776713 tataagttgttatcagcttatttccataaactcttca 37776749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 7871703 - 7871653
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  7871703 ataaggtgttttcagcttatttccataagctcttcaaaagagcttatgaaa 7871653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 42817387 - 42817436
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||||    
T  42817387 taagttgtttttagcttacttccataagctcttcagaatagcttatgaaa 42817436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 6227813 - 6227761
Alignment:
Q  211 gtataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||| || ||||||||||| || ||||||||||||||    
T  6227813 gtataagttgttttcagcttgttaccataagctctccaaaatagcttatgaaa 6227761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 1647296 - 1647250
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  1647296 ataagctgttttcagcttatttccataagctctctataatagcttat 1647250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 35379026 - 35379076
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||| |||||||||| ||  |||||||||||||    
T  35379026 ataagttgttttcagcttattttcataagctctccaagatagcttatgaaa 35379076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 27288697 - 27288641
Alignment:
Q  207 gcttgtataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||| ||||||||||||||||||||||||| ||| |||| ||| ||| |||||||||    
T  27288697 gcttttataagttgttttcagcttatttccgtaaactctacatgataacttatgaaa 27288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 11488337 - 11488286
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaag 264  Q
    |||||||||||||||||||||| ||||| |||| ||  ||||||||||||||    
T  11488337 ataagttgttttcagcttatttgcataatctctccaggatagcttatgaaag 11488286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 15866677 - 15866736
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgctta 271  Q
    |||||| |||||||||||| ||| |||||||||| ||  ||||||||||||||| |||||    
T  15866677 tataaggtgttttcagcttgtttacataagctctccaggatagcttatgaaagtggctta 15866736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 40158779 - 40158728
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||| || |||||||||| || |||| |||||||||    
T  40158779 tataagttgttttcagcttaattacataagctctccagaataacttatgaaa 40158728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 1939342 - 1939392
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||| |||||||||||||||||| ||  |||||||||||||    
T  1939342 ataagctgttttcaacttatttccataagctctccagtatagcttatgaaa 1939392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 11063252 - 11063218
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttca 248  Q
    |||| ||||||||||||||||||||||||||||||    
T  11063252 taagctgttttcagcttatttccataagctcttca 11063218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 15978045 - 15977995
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||| ||||||||||||||||| ||||| |||| || ||||||||||||||    
T  15978045 ataaattgttttcagcttattttcataatctctccaaaatagcttatgaaa 15977995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 16867799 - 16867749
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||| |||||||||||||||||| ||  ||||||| |||||    
T  16867799 ataagttgttttcaacttatttccataagctctccaagatagcttgtgaaa 16867749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 34652046 - 34652096
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||| |||||||||||||||||| ||  |||||||||||||    
T  34652046 ataagctgttttcaacttatttccataagctctccaagatagcttatgaaa 34652096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 35462819 - 35462769
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||| ||||||||| |||||||   |||||||||||||    
T  35462819 ataagttgttttcagctaatttccataggctcttccggatagcttatgaaa 35462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 40837453 - 40837491
Alignment:
Q  221 ttttcagcttatttccataagctcttcataatagcttat 259  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  40837453 ttttcagcttatttccataagctctacatgatagcttat 40837491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 41817228 - 41817178
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||| |||||||||||||||||||||||||||| ||  |||| ||||||||    
T  41817228 ataatttgttttcagcttatttccataagctctccaggatagtttatgaaa 41817178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 43141931 - 43141881
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||  |||||||||||| |||||||  |||||||||||||    
T  43141931 ataagttgttttcattttatttccataaactcttcaggatagcttatgaaa 43141881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 43985021 - 43985063
Alignment:
Q  221 ttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||| |||||||||||||  |||||||||||||    
T  43985021 ttttcagcttattttcataagctcttcaagatagcttatgaaa 43985063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 1160749 - 1160782
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||| |||||||||||||||||    
T  1160749 tataagttgttttcagtttatttccataagctct 1160782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 28677669 - 28677714
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagctta 258  Q
    ||||||||||||| ||||||||||||||||||| || |||| ||||    
T  28677669 ataagttgttttcggcttatttccataagctctccaaaataactta 28677714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 41032964 - 41032997
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||||||||||||||||| ||||    
T  41032964 tataagttgttttcagcttatttccataaactct 41032997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 8187465 - 8187513
Alignment:
Q  215 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||| |||||||||||| |||| |||  ||||||||||||    
T  8187465 aagttgttttcaggttatttccataatctctccatggtagcttatgaaa 8187513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 18840856 - 18840824
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||| ||||||||||||||||||    
T  18840856 ataagttgttttcatcttatttccataagctct 18840824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 24098156 - 24098112
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||||| || |||||  |||||||    
T  24098156 tgttttcagcttatttccataagctctccaaaataggctatgaaa 24098112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 25796210 - 25796242
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||||||||||| |||||||||    
T  25796210 ataagttgttttcagcttatttcaataagctct 25796242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 43205363 - 43205319
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||| |||||||||||||||||| | | |||||||||||||    
T  43205363 tgttttcaacttatttccataagctctccgtgatagcttatgaaa 43205319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000004; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 2592320 - 2592365
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||||||||||||||||||||||||||| || ||||||||||    
T  2592320 taagttgttttcagcttatttccataagctctccaaaatagcttat 2592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 27123363 - 27123407
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagctta 258  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  27123363 taagttgttttcaacttatttccataagctctccataatagctta 27123407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 11802594 - 11802544
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||||||||||  |||||||||| |||||||||||||||||    
T  11802594 ataagctgttttcagcttattctcataagctctccataatagcttatgaaa 11802544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 23819149 - 23819099
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||| |||||||| ||||||||||||  |||||||||||||    
T  23819149 ataagttgttttcatcttatttctataagctcttcaagatagcttatgaaa 23819099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 29263430 - 29263380
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||| ||||||| ||  |||||||||||||    
T  29263430 ataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaa 29263380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 37575946 - 37575996
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||| |||||||||| |||||||||||| |||| ||||    
T  37575946 ataagttgttttcagctcatttccataaactcttcataatatcttacgaaa 37575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 45927409 - 45927359
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||| |||||    
T  45927409 ataagctgttttcagcttatttccataaactctccataatagcttctgaaa 45927359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 46110263 - 46110213
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||| |||||||||  || |||||||||||||    
T  46110263 ataagttgttttcagcttatttctataagctctcaatcatagcttatgaaa 46110213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 53673668 - 53673718
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||| |||||||||| ||  |||||||||||||    
T  53673668 ataagttgttttcagcttatttacataagctctccaagatagcttatgaaa 53673718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 35743343 - 35743290
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaagt 265  Q
    |||||||||||| || ||||||||||||| |||||||| |||| ||||||||||    
T  35743343 tataagttgtttccaacttatttccataaactcttcatgatagtttatgaaagt 35743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 5131260 - 5131292
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||||||||||||||    
T  5131260 ataagttgttttcagcttatttccataagctct 5131292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 18628555 - 18628603
Alignment:
Q  215 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaa 18628603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 32066095 - 32066146
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||| |||||| |||||||||||||||||| | ||| |||||||||||||    
T  32066095 tataagatgttttaagcttatttccataagctttacatgatagcttatgaaa 32066146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 35064916 - 35064865
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||| ||||||||||||||||||||||| |||| ||| ||| |||||||||    
T  35064916 tataaattgttttcagcttatttccataaactctccatgatatcttatgaaa 35064865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 47800676 - 47800633
Alignment:
Q  220 gttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||| |||||||||||||  |||||||||||||    
T  47800676 gttttcagcttattttcataagctcttcaagatagcttatgaaa 47800633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 55547053 - 55547104
Alignment:
Q  212 tataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||| ||||||||||||||| || ||||  |||||||||||||    
T  55547053 tataagttgtttttagcttatttccataaacttttcagcatagcttatgaaa 55547104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 6364209 - 6364151
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaagttgctta 271  Q
    ||||| |||||||||||||||| | |||| ||| ||| ||||||||||||| |||||||    
T  6364209 ataagctgttttcagcttattttcgtaagttctccattatagcttatgaaaattgctta 6364151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 6428078 - 6428032
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||| ||| ||| ||||||||||||||||||||| ||||||||    
T  6428078 ataagttgatttaagcatatttccataagctcttcatagtagcttat 6428032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 7694020 - 7694070
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||||||| |||| ||  ||| |||||||||    
T  7694020 ataagttgttttcagcttatttccataaactctccaggataacttatgaaa 7694070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 14011293 - 14011247
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttatg 260  Q
    |||| ||||||||||||||||||||||||||| ||  ||||||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagcttatg 14011247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 17884128 - 17884078
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||||||| |||| |||||||||| ||  |||||||||||||    
T  17884128 ataagttgttttcagctaattttcataagctctccaatatagcttatgaaa 17884078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 19429769 - 19429723
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttat 259  Q
    ||||| ||||||||||||||||||||||||||| ||  |||||||||    
T  19429769 ataagctgttttcagcttatttccataagctctccaggatagcttat 19429723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 34398695 - 34398745
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||| ||||| ||||||||||||| ||| || ||||||||||    
T  34398695 ataagttgttttcggcttacttccataagctctccatgatggcttatgaaa 34398745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 43412421 - 43412371
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||| |||||| || ||||||| ||||||||||||||| ||||||||||||    
T  43412421 ataaattgtttccatcttatttgcataagctcttcatagtagcttatgaaa 43412371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 243
Target Start/End: Complemental strand, 43824343 - 43824313
Alignment:
Q  213 ataagttgttttcagcttatttccataagct 243  Q
    |||||||||||||||||||||||||||||||    
T  43824343 ataagttgttttcagcttatttccataagct 43824313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 49219199 - 49219149
Alignment:
Q  213 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||||||||||||||| ||||| |  |||| ||||||||    
T  49219199 ataagttgttttcagcttatttccataatctctttaagatagtttatgaaa 49219149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 28300310 - 28300359
Alignment:
Q  214 taagttgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    ||||||||||||| ||||||| |||||||||||||  ||||| |||||||    
T  28300310 taagttgttttcaacttattttcataagctcttcaagatagcctatgaaa 28300359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 825506 - 825550
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||    
T  825506 tgttttcagcttattttcataagttctccaaaatagcttatgaaa 825550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 1137772 - 1137740
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    ||||||||||||||| |||||||||||||||||    
T  1137772 ataagttgttttcagtttatttccataagctct 1137740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 240
Target Start/End: Original strand, 3176113 - 3176141
Alignment:
Q  212 tataagttgttttcagcttatttccataa 240  Q
    |||||||||||||||||||||||||||||    
T  3176113 tataagttgttttcagcttatttccataa 3176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 21157822 - 21157778
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||| |||||||||||||||||||||||  ||||| |||||||    
T  21157822 tgtttttagcttatttccataagctcttcaggatagcatatgaaa 21157778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 24929553 - 24929521
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||| ||||||||||||||||||||||||||||    
T  24929553 ataaattgttttcagcttatttccataagctct 24929521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 28615380 - 28615344
Alignment:
Q  227 gcttatttccataagctcttcataatagcttatgaaa 263  Q
    |||||||| |||||||||||||| |||||||||||||    
T  28615380 gcttattttcataagctcttcattatagcttatgaaa 28615344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 33534179 - 33534211
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||| ||||||||||    
T  33534179 ataagttgttttcagcttattttcataagctct 33534211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 45738137 - 45738105
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    ||||| |||||||||||||||||||||||||||    
T  45738137 ataagatgttttcagcttatttccataagctct 45738105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 6503 - 6536
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||| |||||||||||||||||    
T  6503 tataagttgttttcagtttatttccataagctct 6536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 13523 - 13556
Alignment:
Q  212 tataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||| |||||||||||||||||    
T  13523 tataagttgttttcagtttatttccataagctct 13556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 6653 - 6693
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||| |||||||||||||||||| ||||||| |||||    
T  6653 tgttttcaacttatttccataagctctgcataataacttat 6693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 3533 - 3501
Alignment:
Q  213 ataagttgttttcagcttatttccataagctct 245  Q
    |||||||||||||||||||||||||||| ||||    
T  3533 ataagttgttttcagcttatttccataatctct 3501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 116572 - 116612
Alignment:
Q  219 tgttttcagcttatttccataagctcttcataatagcttat 259  Q
    |||||||| |||||||||||||||||| ||||||| |||||    
T  116572 tgttttcaacttatttccataagctctgcataataacttat 116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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