View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0225_high_6 (Length: 461)

Name: NF0225_high_6
Description: NF0225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0225_high_6
NF0225_high_6
[»] chr5 (1 HSPs)
chr5 (11-461)||(3004587-3005041)
[»] chr4 (3 HSPs)
chr4 (11-387)||(54654663-54655040)
chr4 (194-330)||(1065539-1065672)
chr4 (367-433)||(42094340-42094406)
[»] chr3 (4 HSPs)
chr3 (130-435)||(51648950-51649252)
chr3 (369-435)||(8505207-8505273)
chr3 (345-401)||(4866114-4866170)
chr3 (345-401)||(55039881-55039937)
[»] chr1 (5 HSPs)
chr1 (130-433)||(20604307-20604611)
chr1 (130-205)||(29310805-29310880)
chr1 (345-428)||(35164380-35164463)
chr1 (345-401)||(30402649-30402705)
chr1 (345-401)||(30409206-30409262)
[»] chr8 (4 HSPs)
chr8 (130-435)||(30847932-30848233)
chr8 (345-401)||(11144349-11144405)
chr8 (345-428)||(1660597-1660680)
chr8 (364-428)||(1599698-1599762)
[»] scaffold0390 (1 HSPs)
scaffold0390 (189-331)||(984-1123)
[»] chr2 (1 HSPs)
chr2 (189-331)||(22140157-22140296)
[»] scaffold0786 (1 HSPs)
scaffold0786 (189-331)||(2452-2591)
[»] chr6 (1 HSPs)
chr6 (172-211)||(31449287-31449326)
[»] chr7 (1 HSPs)
chr7 (345-401)||(13949966-13950022)


Alignment Details
Target: chr5 (Bit Score: 401; Significance: 0; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 11 - 461
Target Start/End: Complemental strand, 3005041 - 3004587
Alignment:
Q  11 cataggtagcaaaccgcaacacatcaccactgccaacacagttgaaccacatcagtctgttgtctgaaaaccgcaccagtcacaaccttaaagctttcgt 110  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3005041 cataggtagcaaaccgcagcacatcaccactgccaacacagttgaaccacatcagtctgttgtccgaaaaccgcaccagtcacaaccttaaagctttcgt 3004942  T
Q  111 ctcact---aaccacagacaactttctattccattgtcttctgaataagttttacctgaaacaaaaacataattttctataaaattagcatctccaaagg 207  Q
    ||||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3004941 ctcacttataaccacagacaactttctattccattgtcttttgaataagttttacctgaaacaaaaacataattttctataaaattagcatctccaaagg 3004842  T
Q  208 accatctcccaatatttattag-atatgtacatcatcgtcatcacataaagtagtatattgatttgatatcccatggagacacttctttctttcagatgg 306  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3004841 accacctcccaatatttattaggatatgtacatcatcgtcatcacataaagtagtatattgatttgatatcccatggagacacttctttctttcagatag 3004742  T
Q  307 gattaaatcggcaaacaatgttctcttaatgcaatatcgcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataatatgaa 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3004741 gattaaatcggcaaacaatgttctcttaatgcaatatcgcagtcaaagaaaactatcttaaaactcaattcatattacttgcaacttgatataatatgaa 3004642  T
Q  407 aatgggagacataatacatgtaaaacagaatgtgatgaagaaggggcaatgccta 461  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3004641 aatgggagacataatacatgtagaacagaatgtgatgaagaaggggcaatgccta 3004587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 318; Significance: 1e-179; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 11 - 387
Target Start/End: Complemental strand, 54655040 - 54654663
Alignment:
Q  11 cataggtagcaaaccgcaacacatcaccactgccaacacagttgaaccacatcagtctgttgtctgaaaaccgcaccagtcacaaccttaaagctttcgt 110  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  54655040 cataggtagcaaaccgcagcacatcaccactgccaacacagttgaaccacaacagtctgctgtctgaaaaccgcactagtcacaaccttaaagctttcgt 54654941  T
Q  111 ctcactaaccacagacaactttctattccattgtcttctgaataagttttacctgaaacaaaaacataattttctataaaattagcatctccaaaggacc 210  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54654940 ctcactaaccacagacagctttgtattccattgtcttctgaataagttttacctgaaacaaaaacataattttttataaaattagcatctccaaaggacc 54654841  T
Q  211 atctcccaatatttatta-gatatgtacatcatcgtcatcacataaagtagtatattgatttgatatcccatggagacacttctttctttcagatgggat 309  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54654840 acctcccaatatttattaggatatgtacatcatcgtcatcacataaagtagtatattgatttgatatcccatggagacacttctttctttcagatgggat 54654741  T
Q  310 taaatcggcaaacaatgttctcttaatgcaatatcgcagtcaacgaaaactatcttaaaactcaattcatattacttg 387  Q
    ||||||| |||||||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  54654740 taaatcgacaaacaatgttctcttgatacaatatcgtagtcaaagaaaactatcttaaaactcaattcatattacttg 54654663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 330
Target Start/End: Original strand, 1065539 - 1065672
Alignment:
Q  194 agcatctccaaaggaccatctcccaatatttattag-atatgtacatcatcgtcatcacataaagtagtatattgatttgatatcccatggagacacttc 292  Q
    |||||||||| | ||||| |||| |||||| ||||| ||||||| ||  || |||||||| ||| |||||||||||||| ||||||||  ||||||||||    
T  1065539 agcatctccacaagaccacctccaaatattaattaggatatgtatatagtcatcatcacaaaaaatagtatattgatttcatatcccaaagagacacttc 1065638  T
Q  293 tttctttcagatgggattaaatcggcaaacaatgttct 330  Q
    |||     ||||||||| ||||||||||||| ||||||    
T  1065639 tttt----agatgggatcaaatcggcaaacattgttct 1065672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 433
Target Start/End: Original strand, 42094340 - 42094406
Alignment:
Q  367 aaactcaattcatattacttgcaacttgagataatatgaaaatgggagacataatacatgtaaaaca 433  Q
    |||||||||| | |||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||    
T  42094340 aaactcaatttaaattacttgcaacttgaaataatatgaaaatggaagacattatacatgtagaaca 42094406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 1e-97; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 130 - 435
Target Start/End: Complemental strand, 51649252 - 51648950
Alignment:
Q  130 tttctattccattgtcttctgaataagttttacctgaaacaaaaacataattttctataaaattagcatctccaaaggaccatctcccaatatttattag 229  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||| |||||    
T  51649252 tttctatgtcattgtcttctaaataagttttacctgaaacaaaaacataattttctataaaatttgcatctccaaaggaccacctctaaatattaattag 51649153  T
Q  230 -atatgtacat---catcgtcatcacataaagtagtatattgatttgatatcccatggagacacttctttctttcagatgggattaaatcggcaaacaat 325  Q
     ||||||||||   |||| ||||||||||   |||||||||||||||||||||||||||||||||||||||    ||||||||| |||||||||||||||    
T  51649152 gatatgtacatgatcatcatcatcacata---tagtatattgatttgatatcccatggagacacttctttc----agatgggatcaaatcggcaaacaat 51649060  T
Q  326 gttctcttaatgcaatatcgcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataatatgaaaatgggagacataatacat 425  Q
    ||||||| |||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  51649059 gttctctaaatgcaattttgcagtcaaagaaaaccatcttaaaactcaattcatattacttgcaacttgaaatcgtatgaaaatgggagacataatacat 51648960  T
Q  426 gtaaaacaga 435  Q
    ||| ||||||    
T  51648959 gtagaacaga 51648950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 369 - 435
Target Start/End: Original strand, 8505207 - 8505273
Alignment:
Q  369 actcaattcatattacttgcaacttgagataatatgaaaatgggagacataatacatgtaaaacaga 435  Q
    ||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||| || ||||||    
T  8505207 actcaattcatattacttgcaacttgaaatcgtatgaaaataggagacataatacatatagaacaga 8505273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 401
Target Start/End: Complemental strand, 4866170 - 4866114
Alignment:
Q  345 gcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataat 401  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||| |||| |||||    
T  4866170 gcagtcaaagaaaactaccttaaaactcaatttaaattacttgcaatttgaaataat 4866114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 401
Target Start/End: Original strand, 55039881 - 55039937
Alignment:
Q  345 gcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataat 401  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||| |||| |||||    
T  55039881 gcagtcaaagaaaactaccttaaaactcaatttaaattacttgcaatttgaaataat 55039937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 3e-89; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 130 - 433
Target Start/End: Complemental strand, 20604611 - 20604307
Alignment:
Q  130 tttctattccattgtcttctgaataagttttacctgaaacaaaaacataattttctataaaattagcatctccaaaggaccatctcccaatatttattag 229  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||| |||||    
T  20604611 tttctatgccattgtcttctaaataagttttacctgaaacaaaaacataattttctataaaatttgcatctccaaaggaccacctctaaatattaattag 20604512  T
Q  230 -atatgtacat-------catcgtcatcacataaagtagtatattgatttgatatcccatggagacacttctttctttcagatgggattaaatcggcaaa 321  Q
     ||||||||||       |||| ||||||||||   |||||||||||||||||||||||||||||| ||||||||    ||||||||| |||||| ||||    
T  20604511 gatatgtacatgcatgatcatcatcatcacata---tagtatattgatttgatatcccatggagacgcttctttc----agatgggatcaaatcgacaaa 20604419  T
Q  322 caatgttctcttaatgcaatatcgcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataatatgaaaatgggagacataat 421  Q
    ||||||||||| |||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  20604418 caatgttctctaaatgcaattttgcagtcaaagaaaaccatcttaaaactcaattcatattacttgcaacttgaaatcgtatgaaaatgggagacataat 20604319  T
Q  422 acatgtaaaaca 433  Q
    ||||||| ||||    
T  20604318 acatgtagaaca 20604307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 29310880 - 29310805
Alignment:
Q  130 tttctattccattgtcttctgaataagttttacctgaaacaaaaacataattttctataaaattagcatctccaaa 205  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29310880 tttctattccattgtcttttaaataagttttacctgaaacaaaaacataattttctataaaatttgcatctccaaa 29310805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 428
Target Start/End: Complemental strand, 35164463 - 35164380
Alignment:
Q  345 gcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataatatgaaaatgggagacataatacatgta 428  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||| |||| |||||  ||| |||| | |||| |||||||||    
T  35164463 gcagtcaaagaaaactaccttaaaactcaatttaaattacttgcaatttgaaataattcgaatatggaaaacattatacatgta 35164380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 401
Target Start/End: Original strand, 30402649 - 30402705
Alignment:
Q  345 gcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataat 401  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||| |||| |||||    
T  30402649 gcagtcaaagaaaactaccttaaaactcaatttaaattacttgcaatttgaaataat 30402705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 401
Target Start/End: Original strand, 30409206 - 30409262
Alignment:
Q  345 gcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataat 401  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||| |||| |||||    
T  30409206 gcagtcaaagaaaactaccttaaaactcaatttaaattacttgcaatttgaaataat 30409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 4e-88; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 130 - 435
Target Start/End: Original strand, 30847932 - 30848233
Alignment:
Q  130 tttctattccattgtcttctgaataagttttacctgaaacaaaaacataattttctataaaattagcatctccaaaggaccatctcccaatatttattag 229  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| || ||| |||||    
T  30847932 tttctattccattgtcttctaaattagttttacctgaaacaaaaacataattttctataaaatttgc-tctccaaaggaccacctccaaaaattaattag 30848030  T
Q  230 -atatgtacatcatcgt---catcacataaagtagtatattgatttgatatcccatggagacacttctttctttcagatgggattaaatcggcaaacaat 325  Q
     |||||||||||||| |   |||||||||   |||||||||||||||||||||  |||||||||||||||     ||||||||| |||||||||||||||    
T  30848031 gatatgtacatcatcataatcatcacata---tagtatattgatttgatatcctgtggagacacttctttt----agatgggatcaaatcggcaaacaat 30848123  T
Q  326 gttctcttaatgcaatatcgcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataatatgaaaatgggagacataatacat 425  Q
    ||||||| | |||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  30848124 gttctctaattgcaattttgcagtcaaagaaaaccatcttaaaactcaattcatattacttgcaacttgaaatcatatgaaaatgggagacataatacat 30848223  T
Q  426 gtaaaacaga 435  Q
    ||| ||||||    
T  30848224 gtagaacaga 30848233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 401
Target Start/End: Complemental strand, 11144405 - 11144349
Alignment:
Q  345 gcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataat 401  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||| |||| |||||    
T  11144405 gcagtcaaagaaaactaccttaaaactcaatttaaattacttgcaatttgaaataat 11144349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 428
Target Start/End: Original strand, 1660597 - 1660680
Alignment:
Q  345 gcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataatatgaaaatgggagacataatacatgta 428  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||| || | |||||  ||| |||| | |||| |||||||||    
T  1660597 gcagtcaaagaaaactaccttaaaactcaatttaaattacttgcaatttaaaataattcgaatatggaaaacattatacatgta 1660680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 428
Target Start/End: Original strand, 1599698 - 1599762
Alignment:
Q  364 ttaaaactcaattcatattacttgcaacttgagataatatgaaaatgggagacataatacatgta 428  Q
    ||||||||||||| | ||||||||||| |||| |||||  ||| |||| |||||| |||||||||    
T  1599698 ttaaaactcaatttaaattacttgcaatttgaaataattcgaatatggaagacattatacatgta 1599762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 189 - 331
Target Start/End: Complemental strand, 1123 - 984
Alignment:
Q  189 aaattagcatctccaaaggaccatctcccaatatttattag-atatgtacatcatcgtcatcacataaagtagtatattgatttgatatcccatggagac 287  Q
    |||| |||||||||||||||||| |||| |||||| ||||| ||||||| ||  || |||||||| ||||| |||||||||||| ||||||||  |||||    
T  1123 aaataagcatctccaaaggaccacctccaaatattaattaggatatgtatatagtcatcatcacaaaaagttgtatattgatttcatatcccaaagagac 1024  T
Q  288 acttctttctttcagatgggattaaatcggcaaacaatgttctc 331  Q
    |||||    ||||||||||||| ||||||||||||| |||||||    
T  1023 acttc----tttcagatgggatcaaatcggcaaacattgttctc 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 331
Target Start/End: Original strand, 22140157 - 22140296
Alignment:
Q  189 aaattagcatctccaaaggaccatctcccaatatttattag-atatgtacatcatcgtcatcacataaagtagtatattgatttgatatcccatggagac 287  Q
    |||| |||||||||||||||||| |||| |||||| ||||| ||||||| ||  || |||||||| ||||| |||||||||||| ||||||||  |||||    
T  22140157 aaataagcatctccaaaggaccacctccaaatattaattaggatatgtatatagtcatcatcacaaaaagttgtatattgatttcatatcccaaagagac 22140256  T
Q  288 acttctttctttcagatgggattaaatcggcaaacaatgttctc 331  Q
    |||||||||     |||||||| ||||||||||||| |||||||    
T  22140257 acttctttcg----gatgggatcaaatcggcaaacattgttctc 22140296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 331
Target Start/End: Complemental strand, 2591 - 2452
Alignment:
Q  189 aaattagcatctccaaaggaccatctcccaatatttattag-atatgtacatcatcgtcatcacataaagtagtatattgatttgatatcccatggagac 287  Q
    |||| |||||||||||||||||| |||| || ||| ||||| ||||||| ||  || |||||||| ||||| |||||||||||| ||||||||  |||||    
T  2591 aaataagcatctccaaaggaccacctccaaagattaattaggatatgtatatagtcatcatcacaaaaagttgtatattgatttcatatcccaatgagac 2492  T
Q  288 acttctttctttcagatgggattaaatcggcaaacaatgttctc 331  Q
    |||||    ||||||||||||| ||||||| ||||| |||||||    
T  2491 acttc----tttcagatgggatcaaatcggaaaacattgttctc 2452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 31449326 - 31449287
Alignment:
Q  172 aaacataattttctataaaattagcatctccaaaggacca 211  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31449326 aaacataattttctataaaattagcatctccaaaggacca 31449287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 401
Target Start/End: Complemental strand, 13950022 - 13949966
Alignment:
Q  345 gcagtcaacgaaaactatcttaaaactcaattcatattacttgcaacttgagataat 401  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||| |||| |||||    
T  13950022 gcagtcaaagaaaactaccttaaaactcaatttaaattacttgcaatttgaaataat 13949966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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