View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0225_low_14 (Length: 405)

Name: NF0225_low_14
Description: NF0225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0225_low_14
NF0225_low_14
[»] chr7 (66 HSPs)
chr7 (265-391)||(4680875-4681001)
chr7 (265-392)||(11649986-11650113)
chr7 (265-392)||(23591391-23591519)
chr7 (259-392)||(12140838-12140972)
chr7 (264-392)||(16671604-16671733)
chr7 (264-392)||(17645972-17646101)
chr7 (267-394)||(11646185-11646312)
chr7 (265-392)||(9141937-9142066)
chr7 (265-391)||(22773890-22774015)
chr7 (265-392)||(48640777-48640906)
chr7 (265-391)||(2526931-2527059)
chr7 (265-392)||(11646374-11646502)
chr7 (265-392)||(18486634-18486762)
chr7 (265-394)||(16492520-16492649)
chr7 (261-392)||(22324280-22324412)
chr7 (265-392)||(27716508-27716636)
chr7 (265-391)||(45419614-45419741)
chr7 (265-394)||(48640991-48641121)
chr7 (265-390)||(34837187-34837315)
chr7 (265-391)||(19222105-19222233)
chr7 (288-392)||(4681121-4681227)
chr7 (265-371)||(27716308-27716414)
chr7 (265-392)||(21224138-21224266)
chr7 (265-392)||(23591608-23591736)
chr7 (294-392)||(18487180-18487279)
chr7 (258-392)||(40450078-40450213)
chr7 (266-391)||(45419820-45419947)
chr7 (265-392)||(2354641-2354770)
chr7 (265-371)||(11645930-11646036)
chr7 (260-392)||(35124720-35124853)
chr7 (265-381)||(46264272-46264389)
chr7 (265-382)||(30991459-30991578)
chr7 (265-394)||(4681573-4681699)
chr7 (265-392)||(48641417-48641546)
chr7 (265-392)||(16671246-16671375)
chr7 (265-392)||(17645614-17645743)
chr7 (257-348)||(32278158-32278249)
chr7 (265-391)||(34837442-34837568)
chr7 (268-391)||(2853195-2853320)
chr7 (259-355)||(9142148-9142244)
chr7 (265-343)||(11646627-11646705)
chr7 (265-371)||(21128040-21128146)
chr7 (297-381)||(43059223-43059308)
chr7 (286-394)||(1566482-1566593)
chr7 (265-392)||(4454924-4455052)
chr7 (288-392)||(16362667-16362772)
chr7 (294-370)||(40686892-40686967)
chr7 (265-332)||(23591237-23591304)
chr7 (265-318)||(34837388-34837441)
chr7 (342-392)||(9395804-9395855)
chr7 (265-311)||(34837655-34837701)
chr7 (265-322)||(6249840-6249897)
chr7 (344-392)||(6249896-6249945)
chr7 (265-314)||(46264086-46264135)
chr7 (366-394)||(4455240-4455268)
chr7 (222-262)||(5194286-5194326)
chr7 (222-262)||(5810979-5811019)
chr7 (222-262)||(24001067-24001107)
chr7 (222-262)||(26898457-26898497)
chr7 (222-262)||(27535286-27535326)
chr7 (222-262)||(31408688-31408728)
chr7 (222-262)||(40236924-40236964)
chr7 (222-262)||(41861679-41861719)
chr7 (222-262)||(42538486-42538526)
chr7 (222-262)||(43317448-43317488)
chr7 (222-262)||(44326183-44326223)
[»] chr6 (39 HSPs)
chr6 (261-392)||(9828915-9829047)
chr6 (265-392)||(25068188-25068317)
chr6 (265-394)||(4811037-4811168)
chr6 (265-394)||(17202850-17202980)
chr6 (265-387)||(17906784-17906906)
chr6 (265-392)||(25067962-25068090)
chr6 (265-391)||(17201597-17201724)
chr6 (265-391)||(23610432-23610559)
chr6 (265-391)||(27579598-27579725)
chr6 (265-391)||(4100293-4100424)
chr6 (260-398)||(808467-808605)
chr6 (261-391)||(27315283-27315413)
chr6 (265-394)||(17199986-17200115)
chr6 (265-391)||(808829-808958)
chr6 (265-387)||(23622218-23622341)
chr6 (265-394)||(32208383-32208513)
chr6 (296-391)||(17202661-17202758)
chr6 (265-392)||(26832494-26832622)
chr6 (265-392)||(15130899-15131029)
chr6 (265-394)||(29201558-29201676)
chr6 (265-394)||(17080035-17080166)
chr6 (286-391)||(23902528-23902634)
chr6 (265-391)||(808693-808811)
chr6 (286-341)||(17011130-17011185)
chr6 (267-329)||(1393582-1393644)
chr6 (265-311)||(4125709-4125755)
chr6 (267-353)||(8685155-8685236)
chr6 (267-353)||(8674476-8674557)
chr6 (308-369)||(32208573-32208634)
chr6 (266-314)||(17011026-17011074)
chr6 (222-262)||(27441547-27441587)
chr6 (265-312)||(19121169-19121216)
chr6 (265-311)||(17010917-17010963)
chr6 (261-311)||(33482438-33482488)
chr6 (222-262)||(9698388-9698428)
chr6 (265-309)||(25068140-25068184)
chr6 (222-262)||(26466804-26466844)
chr6 (222-262)||(26670064-26670104)
chr6 (222-262)||(31109277-31109317)
[»] chr4 (67 HSPs)
chr4 (265-392)||(48076190-48076318)
chr4 (265-392)||(23952483-23952610)
chr4 (265-394)||(36639172-36639302)
chr4 (268-392)||(48076371-48076496)
chr4 (261-391)||(4941674-4941805)
chr4 (265-392)||(23952758-23952886)
chr4 (265-392)||(54653627-54653755)
chr4 (261-394)||(2177260-2177394)
chr4 (265-392)||(47768952-47769081)
chr4 (258-392)||(2481629-2481761)
chr4 (265-392)||(22292898-22293025)
chr4 (265-391)||(53144824-53144951)
chr4 (265-392)||(7821303-7821431)
chr4 (265-392)||(28379740-28379867)
chr4 (261-392)||(52689596-52689728)
chr4 (265-392)||(21585535-21585662)
chr4 (265-391)||(24049565-24049692)
chr4 (265-391)||(43161719-43161846)
chr4 (265-392)||(7796785-7796913)
chr4 (265-382)||(48076545-48076664)
chr4 (268-367)||(44500675-44500774)
chr4 (265-394)||(12796096-12796226)
chr4 (265-392)||(7821519-7821647)
chr4 (265-394)||(29967179-29967310)
chr4 (276-392)||(8118608-8118725)
chr4 (265-392)||(8397720-8397848)
chr4 (265-388)||(36639345-36639469)
chr4 (265-392)||(47631360-47631488)
chr4 (265-392)||(8118383-8118510)
chr4 (260-371)||(28389771-28389882)
chr4 (265-390)||(7809348-7809474)
chr4 (296-392)||(21581253-21581351)
chr4 (275-392)||(22292701-22292819)
chr4 (265-394)||(28813225-28813355)
chr4 (265-394)||(28379956-28380077)
chr4 (265-371)||(32010682-32010789)
chr4 (290-394)||(43161898-43162006)
chr4 (307-392)||(8479122-8479206)
chr4 (265-392)||(47631539-47631667)
chr4 (273-391)||(47428394-47428513)
chr4 (294-387)||(7809561-7809655)
chr4 (260-392)||(8079013-8079146)
chr4 (297-371)||(8079327-8079401)
chr4 (268-336)||(15456295-15456363)
chr4 (268-336)||(15463679-15463747)
chr4 (265-323)||(24046065-24046123)
chr4 (319-392)||(24049337-24049411)
chr4 (270-368)||(8078897-8078997)
chr4 (259-394)||(7526420-7526556)
chr4 (328-392)||(41852121-41852188)
chr4 (265-314)||(2526941-2526990)
chr4 (265-310)||(23952613-23952658)
chr4 (265-310)||(23952661-23952706)
chr4 (265-311)||(8079456-8079502)
chr4 (222-262)||(711965-712005)
chr4 (222-262)||(1771321-1771361)
chr4 (222-262)||(3756301-3756341)
chr4 (222-262)||(28988478-28988518)
chr4 (265-321)||(18002111-18002170)
chr4 (265-314)||(47428298-47428347)
chr4 (222-262)||(960925-960965)
chr4 (222-262)||(17619207-17619247)
chr4 (222-262)||(32728362-32728402)
chr4 (222-262)||(41878411-41878451)
chr4 (222-262)||(43514741-43514781)
chr4 (222-262)||(46827761-46827801)
chr4 (222-262)||(55966401-55966441)
[»] chr1 (64 HSPs)
chr1 (265-394)||(51113906-51114036)
chr1 (265-394)||(27296162-27296291)
chr1 (265-392)||(318555-318683)
chr1 (265-392)||(1156043-1156171)
chr1 (265-392)||(44263089-44263217)
chr1 (265-392)||(5428528-5428655)
chr1 (265-392)||(42492142-42492271)
chr1 (261-386)||(44262660-44262785)
chr1 (265-382)||(51114090-51114208)
chr1 (265-391)||(38684015-38684142)
chr1 (265-392)||(16165663-16165792)
chr1 (265-392)||(51113723-51113852)
chr1 (265-392)||(27296337-27296465)
chr1 (261-391)||(21617752-21617883)
chr1 (265-392)||(42497267-42497397)
chr1 (265-392)||(3227200-3227328)
chr1 (265-392)||(52740700-52740829)
chr1 (265-369)||(42496935-42497039)
chr1 (265-391)||(1647543-1647670)
chr1 (266-392)||(4100565-4100691)
chr1 (265-391)||(44263310-44263437)
chr1 (265-377)||(5428933-5429046)
chr1 (260-392)||(5429043-5429180)
chr1 (269-392)||(6537629-6537757)
chr1 (267-392)||(28950148-28950274)
chr1 (265-392)||(18912327-18912456)
chr1 (265-353)||(28950277-28950365)
chr1 (265-391)||(42497448-42497574)
chr1 (265-371)||(51272492-51272598)
chr1 (267-387)||(28949875-28949995)
chr1 (273-391)||(4100771-4100890)
chr1 (294-392)||(44099650-44099747)
chr1 (265-392)||(30083978-30084107)
chr1 (264-371)||(18912214-18912322)
chr1 (265-356)||(33375630-33375721)
chr1 (273-391)||(24595066-24595187)
chr1 (265-371)||(42497111-42497217)
chr1 (297-394)||(52584966-52585064)
chr1 (265-342)||(28950016-28950093)
chr1 (316-392)||(45417578-45417655)
chr1 (319-394)||(12115359-12115435)
chr1 (292-358)||(24595255-24595321)
chr1 (265-392)||(43761946-43762075)
chr1 (265-336)||(6537465-6537536)
chr1 (265-320)||(42492280-42492335)
chr1 (269-311)||(45417699-45417741)
chr1 (343-392)||(47790726-47790778)
chr1 (260-305)||(47790691-47790736)
chr1 (265-314)||(48552883-48552932)
chr1 (265-314)||(48552992-48553041)
chr1 (222-262)||(14427352-14427392)
chr1 (222-262)||(35003299-35003339)
chr1 (222-262)||(44112682-44112722)
chr1 (222-262)||(48119633-48119673)
chr1 (294-353)||(48411972-48412031)
chr1 (343-387)||(11928235-11928277)
chr1 (265-317)||(52584880-52584930)
chr1 (222-262)||(5489781-5489821)
chr1 (364-392)||(24595313-24595341)
chr1 (222-262)||(38113250-38113290)
chr1 (222-262)||(38335923-38335963)
chr1 (222-262)||(41065158-41065198)
chr1 (222-262)||(43571141-43571181)
chr1 (265-305)||(52740915-52740955)
[»] chr3 (55 HSPs)
chr3 (265-392)||(46451470-46451598)
chr3 (265-392)||(47503031-47503159)
chr3 (261-391)||(53047567-53047697)
chr3 (265-394)||(18094956-18095086)
chr3 (265-392)||(837181-837309)
chr3 (265-392)||(36643105-36643233)
chr3 (267-388)||(43017273-43017396)
chr3 (265-391)||(38887343-38887471)
chr3 (262-392)||(35560098-35560230)
chr3 (260-394)||(11454200-11454335)
chr3 (265-394)||(18094741-18094871)
chr3 (265-380)||(11454562-11454679)
chr3 (269-392)||(37760501-37760625)
chr3 (265-392)||(40050850-40050977)
chr3 (265-392)||(20877194-20877322)
chr3 (265-392)||(38887556-38887686)
chr3 (265-392)||(47503204-47503333)
chr3 (265-371)||(45514419-45514524)
chr3 (265-392)||(11454381-11454512)
chr3 (294-392)||(47519955-47520054)
chr3 (265-371)||(16015250-16015356)
chr3 (267-391)||(43819330-43819455)
chr3 (302-392)||(46451320-46451412)
chr3 (269-354)||(47519871-47519956)
chr3 (265-360)||(38887806-38887901)
chr3 (266-392)||(21968986-21969111)
chr3 (266-392)||(21991422-21991547)
chr3 (265-380)||(11453937-11454054)
chr3 (294-371)||(24365763-24365840)
chr3 (265-392)||(11522532-11522662)
chr3 (268-394)||(11220780-11220906)
chr3 (265-371)||(46451078-46451181)
chr3 (301-394)||(52300747-52300841)
chr3 (265-369)||(850932-851036)
chr3 (295-359)||(51654074-51654138)
chr3 (265-392)||(3847825-3847945)
chr3 (339-387)||(851039-851088)
chr3 (265-387)||(25917426-25917546)
chr3 (265-312)||(46451252-46451299)
chr3 (320-357)||(54274787-54274824)
chr3 (222-262)||(4190320-4190360)
chr3 (261-369)||(17755732-17755840)
chr3 (261-369)||(19057052-19057160)
chr3 (222-262)||(25413686-25413726)
chr3 (222-262)||(54246203-54246243)
chr3 (339-392)||(54274725-54274779)
chr3 (222-262)||(9434129-9434169)
chr3 (222-262)||(10457947-10457987)
chr3 (222-262)||(36150135-36150175)
chr3 (222-262)||(40480754-40480794)
chr3 (222-262)||(42100693-42100733)
chr3 (222-262)||(45126983-45127023)
chr3 (222-262)||(47191080-47191120)
chr3 (222-262)||(53581913-53581953)
chr3 (222-262)||(54237101-54237141)
[»] chr2 (58 HSPs)
chr2 (265-392)||(28612211-28612339)
chr2 (265-392)||(28611786-28611914)
chr2 (261-392)||(41995731-41995863)
chr2 (261-391)||(44256469-44256600)
chr2 (265-392)||(10129475-10129603)
chr2 (265-391)||(6348072-6348199)
chr2 (260-392)||(37131466-37131598)
chr2 (293-392)||(5001677-5001777)
chr2 (265-394)||(28612633-28612761)
chr2 (265-392)||(11735910-11736037)
chr2 (265-392)||(28612846-28612975)
chr2 (265-392)||(28611999-28612127)
chr2 (265-391)||(29550133-29550265)
chr2 (289-391)||(11736325-11736428)
chr2 (265-392)||(3249777-3249905)
chr2 (265-392)||(5001499-5001627)
chr2 (265-392)||(28612424-28612551)
chr2 (268-391)||(41326372-41326496)
chr2 (265-369)||(44543717-44543821)
chr2 (265-356)||(627537-627628)
chr2 (265-371)||(12898023-12898129)
chr2 (267-392)||(29549960-29550086)
chr2 (266-359)||(5013208-5013301)
chr2 (265-369)||(44543928-44544032)
chr2 (265-391)||(3249561-3249688)
chr2 (303-392)||(5001352-5001442)
chr2 (303-392)||(5013022-5013112)
chr2 (265-392)||(29549791-29549919)
chr2 (318-394)||(627629-627706)
chr2 (287-392)||(11657474-11657576)
chr2 (265-387)||(12896407-12896532)
chr2 (307-392)||(6347935-6348020)
chr2 (328-392)||(20708899-20708964)
chr2 (286-372)||(19640327-19640414)
chr2 (286-372)||(19838920-19839007)
chr2 (339-392)||(44543660-44543714)
chr2 (265-336)||(2132238-2132309)
chr2 (222-262)||(966889-966929)
chr2 (222-262)||(1750419-1750459)
chr2 (222-262)||(11825709-11825749)
chr2 (222-262)||(16803973-16804013)
chr2 (222-262)||(16843255-16843295)
chr2 (222-262)||(18491710-18491750)
chr2 (222-262)||(41282029-41282069)
chr2 (222-262)||(43114562-43114602)
chr2 (265-387)||(17930465-17930585)
chr2 (224-262)||(7070421-7070459)
chr2 (343-387)||(15256548-15256590)
chr2 (296-337)||(17370109-17370150)
chr2 (265-321)||(20641641-20641700)
chr2 (222-262)||(4299475-4299515)
chr2 (366-394)||(11736228-11736256)
chr2 (222-262)||(12302308-12302348)
chr2 (222-262)||(12415515-12415555)
chr2 (222-262)||(12427575-12427615)
chr2 (222-262)||(16096752-16096792)
chr2 (222-262)||(34817831-34817871)
chr2 (222-262)||(43490456-43490496)
[»] chr8 (65 HSPs)
chr8 (265-392)||(1197878-1198005)
chr8 (268-392)||(27853648-27853773)
chr8 (265-371)||(23828127-23828233)
chr8 (263-392)||(23838321-23838451)
chr8 (265-392)||(3459113-3459241)
chr8 (260-392)||(23085855-23085989)
chr8 (265-392)||(29580017-29580144)
chr8 (261-392)||(23960778-23960909)
chr8 (265-391)||(32062815-32062945)
chr8 (265-392)||(37198276-37198404)
chr8 (265-392)||(33198833-33198960)
chr8 (265-392)||(35617681-35617811)
chr8 (265-391)||(37410051-37410178)
chr8 (267-392)||(39922066-39922192)
chr8 (260-392)||(40399472-40399605)
chr8 (293-392)||(38111372-38111472)
chr8 (265-392)||(44429050-44429177)
chr8 (265-371)||(23830945-23831051)
chr8 (265-392)||(23960560-23960687)
chr8 (293-392)||(34947504-34947603)
chr8 (265-392)||(30439021-30439151)
chr8 (265-392)||(37197884-37198018)
chr8 (265-371)||(37198113-37198220)
chr8 (265-387)||(37197662-37197783)
chr8 (265-392)||(13797442-13797570)
chr8 (265-392)||(2084876-2085005)
chr8 (261-371)||(37426112-37426222)
chr8 (265-392)||(44433629-44433757)
chr8 (265-394)||(44429894-44430024)
chr8 (273-391)||(42045644-42045764)
chr8 (273-358)||(18308258-18308343)
chr8 (259-369)||(43419032-43419138)
chr8 (265-331)||(23838176-23838242)
chr8 (265-392)||(33198603-33198729)
chr8 (265-394)||(604652-604781)
chr8 (265-392)||(44430067-44430196)
chr8 (265-392)||(44430418-44430547)
chr8 (265-392)||(44433802-44433931)
chr8 (344-392)||(44014524-44014572)
chr8 (268-387)||(604485-604606)
chr8 (320-392)||(1276501-1276574)
chr8 (304-392)||(3990184-3990273)
chr8 (265-392)||(44429224-44429353)
chr8 (265-392)||(44433976-44434105)
chr8 (265-321)||(39921960-39922016)
chr8 (265-311)||(37197788-37197834)
chr8 (265-392)||(44430241-44430370)
chr8 (260-314)||(34345139-34345193)
chr8 (265-311)||(39922226-39922272)
chr8 (265-323)||(44434153-44434211)
chr8 (334-392)||(38111190-38111249)
chr8 (343-392)||(604825-604875)
chr8 (222-262)||(30912617-30912657)
chr8 (222-262)||(35181521-35181561)
chr8 (222-262)||(42699262-42699302)
chr8 (344-394)||(604969-605020)
chr8 (265-354)||(604344-604434)
chr8 (333-394)||(23831131-23831193)
chr8 (222-262)||(11582771-11582811)
chr8 (222-262)||(20148765-20148805)
chr8 (222-262)||(29705367-29705407)
chr8 (222-262)||(33630048-33630088)
chr8 (222-262)||(34304793-34304833)
chr8 (222-262)||(36743538-36743578)
chr8 (222-262)||(42295200-42295240)
[»] chr5 (54 HSPs)
chr5 (264-394)||(12442128-12442259)
chr5 (265-392)||(11313979-11314108)
chr5 (265-392)||(35159704-35159831)
chr5 (260-392)||(7127554-7127687)
chr5 (261-394)||(7673193-7673329)
chr5 (265-392)||(16528600-16528728)
chr5 (265-392)||(26523137-26523265)
chr5 (265-392)||(43394931-43395058)
chr5 (257-394)||(19121899-19122037)
chr5 (270-392)||(11313807-11313930)
chr5 (265-391)||(24351450-24351577)
chr5 (265-392)||(31487062-31487189)
chr5 (265-371)||(16529135-16529241)
chr5 (277-392)||(16528793-16528909)
chr5 (265-394)||(16528959-16529087)
chr5 (261-391)||(35159415-35159545)
chr5 (265-392)||(11313640-11313770)
chr5 (257-392)||(19122235-19122371)
chr5 (265-391)||(41093047-41093175)
chr5 (288-391)||(24350897-24351001)
chr5 (265-371)||(9488069-9488175)
chr5 (265-394)||(10409525-10409655)
chr5 (263-392)||(31486813-31486943)
chr5 (265-392)||(41092869-41092995)
chr5 (265-392)||(14166159-14166289)
chr5 (265-371)||(16526197-16526304)
chr5 (265-392)||(23138032-23138161)
chr5 (265-394)||(13105150-13105284)
chr5 (265-358)||(26523268-26523361)
chr5 (265-392)||(13035177-13035309)
chr5 (294-392)||(43395106-43395207)
chr5 (265-394)||(16305348-16305476)
chr5 (286-349)||(24326546-24326609)
chr5 (286-349)||(24350732-24350795)
chr5 (286-349)||(24351286-24351349)
chr5 (292-394)||(38004643-38004744)
chr5 (265-392)||(26523413-26523542)
chr5 (265-310)||(7673100-7673145)
chr5 (265-312)||(38109886-38109933)
chr5 (344-394)||(38109946-38109997)
chr5 (265-314)||(22431585-22431634)
chr5 (222-262)||(33855098-33855138)
chr5 (265-309)||(38268880-38268924)
chr5 (351-392)||(24271122-24271164)
chr5 (351-392)||(24325983-24326025)
chr5 (351-392)||(24347744-24347786)
chr5 (222-262)||(2614704-2614744)
chr5 (222-262)||(7617138-7617178)
chr5 (366-394)||(14165946-14165974)
chr5 (222-262)||(18033987-18034027)
chr5 (222-262)||(22512310-22512350)
chr5 (222-262)||(25915042-25915082)
chr5 (222-262)||(32473449-32473489)
chr5 (222-262)||(41334718-41334758)
[»] scaffold0018 (2 HSPs)
scaffold0018 (265-388)||(163784-163908)
scaffold0018 (268-310)||(163228-163270)
[»] scaffold0504 (1 HSPs)
scaffold0504 (265-378)||(1526-1640)
[»] scaffold0013 (1 HSPs)
scaffold0013 (261-392)||(102701-102831)
[»] scaffold0240 (2 HSPs)
scaffold0240 (265-394)||(13092-13224)
scaffold0240 (299-392)||(13285-13379)
[»] scaffold0294 (1 HSPs)
scaffold0294 (260-368)||(12386-12496)
[»] scaffold0320 (1 HSPs)
scaffold0320 (259-388)||(14562-14692)
[»] scaffold0001 (1 HSPs)
scaffold0001 (265-389)||(196680-196803)
[»] scaffold0097 (1 HSPs)
scaffold0097 (328-392)||(12735-12800)
[»] scaffold1155 (2 HSPs)
scaffold1155 (344-392)||(1104-1152)
scaffold1155 (297-357)||(958-1018)
[»] scaffold0105 (2 HSPs)
scaffold0105 (344-392)||(29867-29915)
scaffold0105 (297-357)||(29721-29781)
[»] scaffold0345 (2 HSPs)
scaffold0345 (344-392)||(9064-9113)
scaffold0345 (297-357)||(9199-9259)
[»] scaffold0003 (1 HSPs)
scaffold0003 (222-262)||(45774-45814)
[»] scaffold0432 (1 HSPs)
scaffold0432 (265-310)||(5370-5415)
[»] scaffold0318 (1 HSPs)
scaffold0318 (265-314)||(5996-6045)
[»] scaffold0385 (1 HSPs)
scaffold0385 (222-262)||(11256-11296)
[»] scaffold0187 (2 HSPs)
scaffold0187 (222-262)||(14243-14283)
scaffold0187 (222-262)||(24571-24611)
[»] scaffold0119 (1 HSPs)
scaffold0119 (222-262)||(690-730)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 4681001 - 4680875
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4681001 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 4680902  T
Q  365 taaaaaatgcatcgcaccaatttcatt 391  Q
    |||||||||||||||||||||||||||    
T  4680901 taaaaaatgcatcgcaccaatttcatt 4680875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 11650113 - 11649986
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11650113 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 11650014  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||| ||||||||||||||    
T  11650013 taaaaaatgcatcacaccaatttcattc 11649986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 23591519 - 23591391
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23591519 ttatttattaattttgttagatctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23591420  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  23591419 taaaaaaatgcatcgcaccaatttcattc 23591391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 259 - 392
Target Start/End: Complemental strand, 12140972 - 12140838
Alignment:
Q  259 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 358  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  12140972 acatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcgttattaggtttgcaattatttaacctaacaaat 12140873  T
Q  359 tccatctaaaa-aatgcatcgcaccaatttcattc 392  Q
    | ||||||||| |||||||||||||||||||||||    
T  12140872 ttcatctaaaagaatgcatcgcaccaatttcattc 12140838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 264 - 392
Target Start/End: Original strand, 16671604 - 16671733
Alignment:
Q  264 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    ||||||| || |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16671604 tttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 16671703  T
Q  364 ct-aaaaaatgcatcgcaccaatttcattc 392  Q
    || |||||||||||||||||||||||||||    
T  16671704 ctaaaaaaatgcatcgcaccaatttcattc 16671733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 264 - 392
Target Start/End: Original strand, 17645972 - 17646101
Alignment:
Q  264 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    ||||||| || |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17645972 tttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 17646071  T
Q  364 ct-aaaaaatgcatcgcaccaatttcattc 392  Q
    || |||||||||||||||||||||||||||    
T  17646072 ctaaaaaaatgcatcgcaccaatttcattc 17646101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 267 - 394
Target Start/End: Complemental strand, 11646312 - 11646185
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 366  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  11646312 atttattaattttgttatgtctgcagcaacttaacctaatttttttccactcatttgctttgttaggtttgcaattatttaacctaacaaattccgtcta 11646213  T
Q  367 aaaaatgcatcgcaccaatttcattcat 394  Q
    ||||||||||||||||||||||||||||    
T  11646212 aaaaatgcatcgcaccaatttcattcat 11646185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 9142066 - 9141937
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  9142066 ttatttattaattttgttatgtctgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 9141967  T
Q  365 taa--aaaatgcatcgcaccaatttcattc 392  Q
    |||  ||||||||| |||||||||||||||    
T  9141966 taaaaaaaatgcattgcaccaatttcattc 9141937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 22774015 - 22773890
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  22774015 ttatttattaattttgttacgtctgcaacaatttaacctaattttt-cccgctcatttgctttactatgtttgcaattatttaatctaacaaatttcatc 22773917  T
Q  365 taaaaaatgcatcgcaccaatttcatt 391  Q
    ||||||| |||||||||||||||||||    
T  22773916 taaaaaacgcatcgcaccaatttcatt 22773890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 48640906 - 48640777
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48640906 ttatttattaattttgtaaggtctgcagcaatttaacctaatttcttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 48640807  T
Q  365 taa--aaaatgcatcgcaccaatttcattc 392  Q
    |||  |||||||||||||||||||||||||    
T  48640806 taaaaaaaatgcatcgcaccaatttcattc 48640777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 2527059 - 2526931
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||| |||    
T  2527059 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttcccgctcatttgctttattaggtttgcaattatttaacctaactaattacat 2526960  T
Q  364 ctaa-aaaatgcatcgcaccaatttcatt 391  Q
    |||| ||||||||||||||||||||||||    
T  2526959 ctaaaaaaatgcatcgcaccaatttcatt 2526931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 11646502 - 11646374
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  11646502 ttatttattaattttgttacgtctgcagcaacttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccata 11646403  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | ||||||||||| |||||||||||||||    
T  11646402 taaaaaaatgcatagcaccaatttcattc 11646374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 18486634 - 18486762
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  18486634 ttatttattaattttgttaggtttgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 18486733  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | ||||||||||||  |||||||||||||    
T  18486734 taaaaaaatgcatcataccaatttcattc 18486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 16492649 - 16492520
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16492649 ttatttattaattttgttaggtctgcagcaatttaacttatttttttcc-gctcatttgctttattatgtttgcaattatttaacctaacaaatttcatc 16492551  T
Q  365 taaaaaa-tgcatcgcaccaatttcattcat 394  Q
    ||||||| |||||||||| ||||||||||||    
T  16492550 taaaaaagtgcatcgcactaatttcattcat 16492520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 261 - 392
Target Start/End: Original strand, 22324280 - 22324412
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||| |||||||||||||     
T  22324280 atctttatttattaattttgttaggtctgcagcaatttaacctaattgtttcccgctcatttacttttttaggtttgtaattattcaacctaacaaattt 22324379  T
Q  361 catct-aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||| |||||||||||||||||||||||||||    
T  22324380 catctaaaaaaatgcatcgcaccaatttcattc 22324412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 27716636 - 27716508
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  27716636 ttatttattaattttgttaggttttcagcaatttaacctaattttatcccgctcatttgctttattaggtttgcaattatttaacctaacaacttccatc 27716537  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||| ||||    
T  27716536 taaaaaaatgcatcgcaccaatttgattc 27716508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 45419741 - 45419614
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  45419741 ttatttattaattttgttaggtctgcagtaatttaacctaatttttttaagctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 45419642  T
Q  365 taaaaa-atgcatcgcaccaatttcatt 391  Q
    |||||| |||||||||||||||||||||    
T  45419641 taaaaagatgcatcgcaccaatttcatt 45419614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 48641121 - 48640991
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||    
T  48641121 ttatttattaattttgttaggtctgtagcaatttaacatagttttttcccgctcatttgctttattaggtttgcaattatttaaccaaaaaaatttcatc 48641022  T
Q  365 taa-aaaatgcatcgcaccaatttcattcat 394  Q
    ||| |||||||||||||||||||||||||||    
T  48641021 taaaaaaatgcatcgcaccaatttcattcat 48640991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 265 - 390
Target Start/End: Original strand, 34837187 - 34837315
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||  ||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  34837187 ttatttattaattttgttaggtctgcagcaatttaacctaattttttttccgcttatttgctttattaggtttacaattatttaacctaacaaattccat 34837286  T
Q  364 ct--aaaaaatgcatcgcaccaatttcat 390  Q
    ||  |||||||||||||||||||||||||    
T  34837287 ctaaaaaaaatgcatcgcaccaatttcat 34837315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 19222105 - 19222233
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  19222105 ttatttattaattttgttagttctgcagcaatttaacctaattttttttccgttcatttgctttattaggtttacaattatttaacctaacaaattccat 19222204  T
Q  364 ctaaaaa-atgcatcgcaccaatttcatt 391  Q
    ||||||| ||||||| |||||||||||||    
T  19222205 ctaaaaatatgcatcacaccaatttcatt 19222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 4681227 - 4681121
Alignment:
Q  288 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa--aaaatgcatcgcaccaat 385  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||    
T  4681227 tgcaacaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaataaattccatctaaaaaaaatacatcgcaccaat 4681128  T
Q  386 ttcattc 392  Q
    |||||||    
T  4681127 ttcattc 4681121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 27716414 - 27716308
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27716414 ttatttattaattttgttaggtctctagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatc 27716315  T
Q  365 taaaaaa 371  Q
    |||||||    
T  27716314 taaaaaa 27716308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 21224138 - 21224266
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||| || ||||    
T  21224138 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaagtttcatc 21224237  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | ||||||| ||||||| |||||||||||    
T  21224238 taaaaaaatacatcgcatcaatttcattc 21224266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 23591736 - 23591608
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||| ||  | |||| ||||| || |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23591736 ttatttattaattttgctaagtgtgcaacaattgaagctaattttttccctttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23591637  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  23591636 tgaaaaaatgcatcgcaccaatttcattc 23591608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 18487180 - 18487279
Alignment:
Q  294 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  18487180 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcacaccaatttcattc 18487279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 392
Target Start/End: Complemental strand, 40450213 - 40450078
Alignment:
Q  258 aacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 357  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||||    
T  40450213 aacatccttatttattaattttgttaggtctgcagcaatttaacctaatttattcgtgctcatttgctttattagatttgcaattatttaacctaacaaa 40450114  T
Q  358 ttccatctaaaaa-atgcatcgcaccaatttcattc 392  Q
    || | |||||||| |||||||||| |||| ||||||    
T  40450113 tttcttctaaaaatatgcatcgcaacaatatcattc 40450078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 266 - 391
Target Start/End: Complemental strand, 45419947 - 45419820
Alignment:
Q  266 tatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||||||  |||||| |||| ||||||| ||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  45419947 tatttattaattttgttaggtctgcatcaatctaacctatttttttttccgctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 45419848  T
Q  365 taa-aaaatgcatcgcaccaatttcatt 391  Q
    ||| ||||||||||||||||||||||||    
T  45419847 taaaaaaatgcatcgcaccaatttcatt 45419820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 2354770 - 2354641
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  2354770 ttatttattaattttgttaggtctgcagcaatttaacgtaatgttttccagctcatttgctttattaggtttgcaattatttaatataacaaattccatc 2354671  T
Q  365 taa--aaaatgcatcgcaccaatttcattc 392  Q
    |||  ||||||||| |||||||||| ||||    
T  2354670 taaaaaaaatgcattgcaccaattttattc 2354641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 11646036 - 11645930
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||     
T  11646036 ttatttattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcata 11645937  T
Q  365 taaaaaa 371  Q
    |||||||    
T  11645936 taaaaaa 11645930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 260 - 392
Target Start/End: Original strand, 35124720 - 35124853
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    |||| |||||||||||| ||||||  | |||| ||||||||| |||||||||  || ||||||||||||||| |||||||||||||||||||||||||||    
T  35124720 catccttatttattaatgttgttaggtttgcaacaatttaacttaattttttgtcgttcatttgctttattaggtttgcaattatttaacctaacaaatt 35124819  T
Q  360 ccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    || ||| |||||||||||||||||||||||||||    
T  35124820 ccgtctaaaaaaatgcatcgcaccaatttcattc 35124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 265 - 381
Target Start/End: Complemental strand, 46264389 - 46264272
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||| |||||| ||| | ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| ||    
T  46264389 ttatttattaattttgttacgtctgcaacaactcaacctaatttttttccccctcatttgctttattaggtttgcaattatttaacctaacaaattctat 46264290  T
Q  364 ctaaaaaatgcatcgcac 381  Q
    ||||||||||||| ||||    
T  46264289 ctaaaaaatgcattgcac 46264272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 265 - 382
Target Start/End: Original strand, 30991459 - 30991578
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||| ||||||| ||| | |||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30991459 ttatttatcaattttgatacgtttgcaacaatttaacttaattttttttccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 30991558  T
Q  364 ct-aaaaaatgcatcgcacc 382  Q
    || |||||||||||||||||    
T  30991559 ctaaaaaaatgcatcgcacc 30991578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 4681699 - 4681573
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| |||| |   ||||||||||| ||||||||||||||||| ||||||||| ||||    
T  4681699 ttatttattaattttgttacgtctgcagcaatttaacttaattttt-cccgtt---ttgctttattaggtttgcaattatttaacttaacaaatttcatc 4681604  T
Q  365 taa-aaaatgcatcgcaccaatttcattcat 394  Q
    ||| ||||||||||||| |||||||||||||    
T  4681603 taaaaaaatgcatcgcatcaatttcattcat 4681573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 48641546 - 48641417
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||| ||||||| || |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48641546 ttatttattaattttcttacgtctgcaggaacttaacctaattttt-cctgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatc 48641448  T
Q  365 taa---aaaatgcatcgcaccaatttcattc 392  Q
    |||   ||||| ||||||| |||||||||||    
T  48641447 taaaaaaaaattcatcgcatcaatttcattc 48641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 16671246 - 16671375
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaa-tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  16671246 ttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcat 16671344  T
Q  364 ct--aaaaaatgcatcgcaccaatttcattc 392  Q
    ||  |||||||||||||||||| ||||||||    
T  16671345 ctaaaaaaaatgcatcgcaccagtttcattc 16671375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 17645614 - 17645743
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaa-tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  17645614 ttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcat 17645712  T
Q  364 ct--aaaaaatgcatcgcaccaatttcattc 392  Q
    ||  |||||||||||||||||| ||||||||    
T  17645713 ctaaaaaaaatgcatcgcaccagtttcattc 17645743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 257 - 348
Target Start/End: Complemental strand, 32278249 - 32278158
Alignment:
Q  257 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaa 348  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  32278249 taacatccttatttattaattatgttacgtctgcagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaa 32278158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 34837442 - 34837568
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||| |||||||||  ||| |||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||| ||||    
T  34837442 ttatttatttattttgttaggtcttcagcaatttaacataattttttcc-gctcatttactttattaggtttgcaattattttacctaacaaatttcatc 34837540  T
Q  365 t-aaaaaatgcatcgcaccaatttcatt 391  Q
    | |||||||||||||||| |||||||||    
T  34837541 taaaaaaatgcatcgcacaaatttcatt 34837568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 268 - 391
Target Start/End: Complemental strand, 2853320 - 2853195
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttttccc-gctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 366  Q
    ||||||||||||||||| | || | |||||||||||||||||||  | | ||||||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  2853320 tttattaattttgttacatttgtatcaatttaacctaattttttttcagttcatttgttttattaggtttgcaattatttaacctaacaaatttcatcta 2853221  T
Q  367 a-aaaatgcatcgcaccaatttcatt 391  Q
    | ||||||||||||||||||||||||    
T  2853220 aaaaaatgcatcgcaccaatttcatt 2853195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 9142244 - 9142148
Alignment:
Q  259 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaaca 355  Q
    ||||| |||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9142244 acatccttatttattaattttgttaggtctgcaataatttaacctaattttttcccgctcatttgctttatttggtttgcaattatttaacctaaca 9142148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 11646627 - 11646705
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta 343  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  11646627 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaatta 11646705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 371
Target Start/End: Original strand, 21128040 - 21128146
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||| ||||||||||| |||| ||||| ||||||||||||| |||| || ||||||||||||||||||||| ||    
T  21128040 ttatttattaattttgttaggtctgcagcagtttaacctaatctttttccgctgatttgctttattacgtttccatttatttaacctaacaaattccttc 21128139  T
Q  365 taaaaaa 371  Q
     ||||||    
T  21128140 aaaaaaa 21128146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 381
Target Start/End: Original strand, 43059223 - 43059308
Alignment:
Q  297 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa-aatgcatcgcac 381  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  43059223 ttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaagaatgcattgcac 43059308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 286 - 394
Target Start/End: Complemental strand, 1566593 - 1566482
Alignment:
Q  286 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa--aaaatgcatcgcacc 382  Q
    |||||| |||||||||||||||||||   ||| |||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||| || |||||    
T  1566593 tctgcaacaatttaacctaatttttttttcgcacatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaagaaaatgaattgcacc 1566494  T
Q  383 aatttcattcat 394  Q
    ||||||||||||    
T  1566493 aatttcattcat 1566482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 4454924 - 4455052
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||  |||||| ||| |||||||||| ||||||| |  ||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  4454924 ttatttattaattttattaggtctgcaacaacttaacctaatattttccctccaatttgctgtattaggttagcagtaatttaacctaacaaattccatc 4455023  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | ||||||||||||||| |||||||||||    
T  4455024 taaaaaaatgcatcgcatcaatttcattc 4455052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 16362772 - 16362667
Alignment:
Q  288 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatt 386  Q
    ||||||||| ||| |||||||||| ||||||||||| |||||||  |||||| ||||||||||||||||||| |||| || ||||||||||||||||||     
T  16362772 tgcagcaatgtaatctaatttttttccgctcatttgttttattagatttgcagttatttaacctaacaaatttcatcaaataaaatgcatcgcaccaata 16362673  T
Q  387 tcattc 392  Q
    ||||||    
T  16362672 tcattc 16362667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 40686967 - 40686892
Alignment:
Q  294 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaa 370  Q
    ||||||| |||||||||||  | | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  40686967 aatttaagctaattttttca-gtttatttgctttattaggtttgcaattatttaacctaacaaattacatctaaaaa 40686892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 23591304 - 23591237
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat 332  Q
    |||||||| ||||||||||  ||| |  ||||||||||||||||||||||||||||||||||||||||    
T  23591304 ttatttataaattttgttaggtctactacaatttaacctaattttttcccgctcatttgctttattat 23591237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 34837388 - 34837441
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctc 318  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||| |||||    
T  34837388 ttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgctc 34837441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 9395804 - 9395855
Alignment:
Q  342 tatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||| ||||    
T  9395804 tatttaacctaacaattttcatctaaaacaatgcatcgcaccaattttattc 9395855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 34837655 - 34837701
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 311  Q
    |||||||||| ||||||||  | ||||||||||||||||||||||||    
T  34837655 ttatttattagttttgttaggtatgcagcaatttaacctaatttttt 34837701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 6249840 - 6249897
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcattt 322  Q
    |||||||||||||||||||  ||||||||  ||||||||||| |||| || |||||||    
T  6249840 ttatttattaattttgttaggtctgcagcgttttaacctaatatttttcctctcattt 6249897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 6249896 - 6249945
Alignment:
Q  344 tttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 392  Q
    |||||||||||||| |||| | |||| |||||||||||||||||||||||    
T  6249896 tttaacctaacaaactccaacgaaaaaaatgcatcgcaccaatttcattc 6249945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 46264135 - 46264086
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 314  Q
    |||||||||||||||||||  |||| ||||| | ||||||||||||||||    
T  46264135 ttatttattaattttgttaaatctgtagcaactcaacctaattttttccc 46264086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 394
Target Start/End: Original strand, 4455240 - 4455268
Alignment:
Q  366 aaaaaatgcatcgcaccaatttcattcat 394  Q
    |||||||||||||||||||||||||||||    
T  4455240 aaaaaatgcatcgcaccaatttcattcat 4455268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 5194286 - 5194326
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| ||||||||| |||| ||||||||||||||||    
T  5194286 tgtacaatgaggtgtatgaataaatggtgttcatgtaacat 5194326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 5810979 - 5811019
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||||||||| || ||||||||| |||||||||||    
T  5810979 tgtacaatggggtgtaggaataaagggtggtcatgtaacat 5811019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 24001067 - 24001107
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  24001067 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 24001107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 26898457 - 26898497
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  26898457 tgtacaattgggtgtatgaataaaaggtgttcatgtaacat 26898497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 27535286 - 27535326
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  27535286 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 27535326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 31408688 - 31408728
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  31408688 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 31408728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 40236964 - 40236924
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| || ||||||| |||||||||||||||||||||    
T  40236964 tgtacaataggatgtatgattaaagggtgttcatgtaacat 40236924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 41861719 - 41861679
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||| ||| |||||||||| |||||||||||||||||||||    
T  41861719 tgtataattgggtgtatgaataaagggtgttcatgtaacat 41861679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 42538486 - 42538526
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  42538486 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 42538526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 43317488 - 43317448
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| ||||||||| |||| ||||||||||||||||    
T  43317488 tgtacaatgaggtgtatgaataaatggtgttcatgtaacat 43317448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 44326223 - 44326183
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  44326223 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 44326183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 261 - 392
Target Start/End: Original strand, 9828915 - 9829047
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9828915 atctttattaattaattttgttacctctgcagcaatttaacttaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 9829014  T
Q  361 catct-aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||| |||||||||||||||||||||||||||    
T  9829015 catctaaaaaaatgcatcgcaccaatttcattc 9829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 25068188 - 25068317
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 363  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25068188 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaaattccat 25068287  T
Q  364 ct-aaaaaatgcatcgcaccaatttcattc 392  Q
    || |||||||||||||||||||||||||||    
T  25068288 ctaaaaaaatgcatcgcaccaatttcattc 25068317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 4811168 - 4811037
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  4811168 ttatttatttattttgttacgtctgcagcaatttaacctaattttttcccgctcgtttgctttattaggtttgcaattatttaacctaactaattccatc 4811069  T
Q  365 taa--aaaatgcatcgcaccaatttcattcat 394  Q
    |||  |||||| ||||||||||||||||||||    
T  4811068 taaaaaaaatgaatcgcaccaatttcattcat 4811037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 17202850 - 17202980
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  17202850 ttatttataaattttgttaggtctgcagcaatttaacctaattttttcccgcccatttgctttattagatttgcaattatttaacctaacaaattccatc 17202949  T
Q  365 t-aaaaaatgcatcgcaccaatttcattcat 394  Q
    | ||||||||||||||| |||||||||||||    
T  17202950 taaaaaaatgcatcgcatcaatttcattcat 17202980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 17906906 - 17906784
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17906906 ttatttattaattttgttaggtttgcagcaatttaacctaattttttccagctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 17906807  T
Q  365 taaaaaatgcatcgcaccaattt 387  Q
    ||||||||| |||||||||||||    
T  17906806 taaaaaatgtatcgcaccaattt 17906784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 25067962 - 25068090
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||| ||||    
T  25067962 ttatttgttaattttgttacatctgcagcaatttaacctaatttttttccgctcatttgctttataaggtttgcaattatttaacataacaaattacatc 25068061  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  25068062 taaaaaaatgcatcgcaccaatttcattc 25068090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 17201597 - 17201724
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  17201597 ttatttattaattttgttacgtctgcaacaatttaacctaacttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatc 17201696  T
Q  365 t-aaaaaatgcatcgcaccaatttcatt 391  Q
    | ||||||||||||||||||||||||||    
T  17201697 taaaaaaatgcatcgcaccaatttcatt 17201724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 23610432 - 23610559
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  23610432 ttatttattaattttgttaggtctgcaacaatttaacctaatttttttcccgctcatttgctttattaggttt-caattatttaacctaacaaattccat 23610530  T
Q  364 cta-aaaaatgcatcgcaccaatttcatt 391  Q
    ||| |||||||||||||||||||||||||    
T  23610531 ctacaaaaatgcatcgcaccaatttcatt 23610559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 27579598 - 27579725
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||    
T  27579598 ttatttattaattttgttcggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattcaatc 27579697  T
Q  365 t-aaaaaatgcatcgcaccaatttcatt 391  Q
    | |||||||||||| |||||||||||||    
T  27579698 taaaaaaatgcatcacaccaatttcatt 27579725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 4100424 - 4100293
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatt----tgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||    ||||||||||||||||||||||||||| |||||||||||    
T  4100424 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgttcattaatttgctttattatgtttgcaattatttaagctaacaaattc 4100325  T
Q  361 catctaa-aaaatgcatcgcaccaatttcatt 391  Q
    ||||||| ||||||||||||||||||||||||    
T  4100324 catctaaaaaaatgcatcgcaccaatttcatt 4100293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 260 - 398
Target Start/End: Original strand, 808467 - 808605
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    |||| |||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||| || |||||||    
T  808467 catccttatttattaattttgttagttctgcagcaatttaacgtaattttttctcgctcatttgctttattagatttgcaattatttaa-cttacaaatt 808565  T
Q  360 ccatctaaaaaa-tgcatcgcaccaatttcattcatctca 398  Q
    | |||||||||| ||||||||||||||||||||| |||||    
T  808566 ctatctaaaaaattgcatcgcaccaatttcattcctctca 808605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 261 - 391
Target Start/End: Original strand, 27315283 - 27315413
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||||||||||||||||   |||||||||| |||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||    
T  27315283 atctttatttattaattttgttcggtctgcagcaacttaacctaattttttcca-ctaatttgctttattaggtttgcaattatttaacctaacaaattc 27315381  T
Q  361 catct-aaaaaatgcatcgcaccaatttcatt 391  Q
     |||| |||||||||||| |||||||||||||    
T  27315382 aatctaaaaaaatgcatcacaccaatttcatt 27315413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 17199986 - 17200115
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||| |||||||||||||||| ||||||| |||||||||| ||||| |||  || | ||||||||||| ||||| ||||    
T  17199986 ttatttattaattttgttaggtctgtagcaatttaacctaatattttccctctcatttgctatattaggttaacagtaatttaacctaataaatttcatc 17200085  T
Q  365 taaaaaatgcatcgcaccaatttcattcat 394  Q
    ||||||||||||||||||||||||||||||    
T  17200086 taaaaaatgcatcgcaccaatttcattcat 17200115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 808829 - 808958
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||| |||    
T  808829 ttatctattaattttgttaggtctgcagcaatttaacctaatttttttcccactcatttgctttattaggtttgcaattatttaaccaaacaaatttcat 808928  T
Q  364 ctaaa--aaatgcatcgcaccaatttcatt 391  Q
    |||||  ||||||||| ||| |||||||||    
T  808929 ctaaaataaatgcatcacactaatttcatt 808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 387
Target Start/End: Original strand, 23622218 - 23622341
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||  |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| || |    
T  23622218 ttatttattaattttgttaggtctgcaataatttaacctaactttttcccactcatttgctttattaggtttgcaattatttaacctaacaaatttcagc 23622317  T
Q  365 t-aaaaaatgcatcgcaccaattt 387  Q
    | ||||||||  ||||||||||||    
T  23622318 taaaaaaatgtgtcgcaccaattt 23622341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 32208513 - 32208383
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta-tttaacctaacaaattccat 363  Q
    |||||||||||||||| ||  |||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  32208513 ttatttattaattttgctaggtctgcaacaatttaatctaattttttcc-gctcatttgctttattaggtttgcaattattttaacctaacaaattccat 32208415  T
Q  364 cta-aaaaatgcatcgcaccaatttcattcat 394  Q
    ||| |||||||||||  || ||||||||||||    
T  32208414 ctagaaaaatgcatcagactaatttcattcat 32208383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 296 - 391
Target Start/End: Original strand, 17202661 - 17202758
Alignment:
Q  296 tttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 391  Q
    |||||||||||||||| | |||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  17202661 tttaacctaatttttttcacgctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaaaaatgtatcgcaccaatttcatt 17202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 26832622 - 26832494
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc-gctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    ||||||||||| |||||||  | |||| ||||||||||||||||||| || ||| ||||||||||||| ||||||||||||||||| ||||||||| |||    
T  26832622 ttatttattaactttgttagat-tgcaacaatttaacctaatttttttccagcttatttgctttattaggtttgcaattatttaacttaacaaattacat 26832524  T
Q  364 ctaa-aaaatgcatcgcaccaatttcattc 392  Q
    |||| ||||||||| |||||||||||||||    
T  26832523 ctaaaaaaatgcatagcaccaatttcattc 26832494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 15130899 - 15131029
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||||||| ||||| ||| | ||| || |||||| |||||||||  |||||||||||||||||||||||||||| ||    
T  15130899 ttatttattaattttgttacgtctgcagcaacttaacgtaaatattttccactcattcgctttattagatttgcaattatttaacctaacaaattccctc 15130998  T
Q  365 t-aaaaaatgcatcgcac--caatttcattc 392  Q
    | ||||||||||| ||||  |||||||||||    
T  15130999 taaaaaaatgcattgcacatcaatttcattc 15131029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 29201558 - 29201676
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||            |||||||||||||||||||| ||||    
T  29201558 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgcttt------------attatttaacctaacaaatttcatc 29201645  T
Q  365 t-aaaaaatgcatcgcaccaatttcattcat 394  Q
    | |||||||||||| ||||||||||||||||    
T  29201646 taaaaaaatgcatcacaccaatttcattcat 29201676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 17080035 - 17080166
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||  ||||||||||  ||||||||| ||||||  |  ||||||| ||||| ||| ||| | |||||||||||||||||| |||    
T  17080035 ttatttattaattttattatgtctgcagcaacctaacctaatattttccgtccaatttgctgtattaggttagcattaatttaacctaacaaattctatc 17080134  T
Q  365 t--aaaaaatgcatcgcaccaatttcattcat 394  Q
    |  |||||||||||||||||||||||||||||    
T  17080135 tagaaaaaatgcatcgcaccaatttcattcat 17080166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 23902528 - 23902634
Alignment:
Q  286 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc-taaaaaatgcatcgcaccaa 384  Q
    ||||||||||||||||||||| |||||||| ||||||| | ||||| |||  || | |||||||||||||||||| ||| |||||||||||| |||||||    
T  23902528 tctgcagcaatttaacctaatattttcccgttcatttgttgtattaggttaccagtaatttaacctaacaaattctatcttaaaaaatgcattgcaccaa 23902627  T
Q  385 tttcatt 391  Q
    |||||||    
T  23902628 tttcatt 23902634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 808693 - 808811
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||| |||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||  |||    
T  808693 ttatttattaattttgttatgtctgctgcaatttaacctaa-tttttcccgctcattt---------agtttgcaattatttaacctaacaaattttatc 808782  T
Q  365 t--aaaaaatgcatcgcaccaatttcatt 391  Q
    |  |||||||||||| ||| |||||||||    
T  808783 taaaaaaaatgcatcccactaatttcatt 808811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 17011130 - 17011185
Alignment:
Q  286 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaat 341  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||    
T  17011130 tctgcagcaatttaacctaatattttcccgctcatttgatgtattatgttagcaat 17011185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 329
Target Start/End: Original strand, 1393582 - 1393644
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttat 329  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||  || |||||||||||||    
T  1393582 atttattaattttgttaagtctgcagcaatttaaactaattttttttcggtcatttgctttat 1393644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 4125755 - 4125709
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 311  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  4125755 ttatttattaattttgttaggtctgcagcaatttaacctaatttttt 4125709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 353
Target Start/End: Original strand, 8685155 - 8685236
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 353  Q
    |||||||||||||||||  |||||| ||||||||     | |||||||||||||||||| ||||||||| ||||| |||||||||||    
T  8685155 atttattaattttgttaggtctgcaacaatttaa-----tattttcccgctcatttgctgtattatgttagcaataatttaacctaa 8685236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 353
Target Start/End: Original strand, 8674476 - 8674557
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 353  Q
    |||||||||||||||||  |||||| ||||||||     | |||||||||| ||||||| ||||||||| ||||| |||||||||||    
T  8674476 atttattaattttgttaggtctgcaacaatttaa-----tattttcccgcttatttgctgtattatgttagcaataatttaacctaa 8674557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 369
Target Start/End: Complemental strand, 32208634 - 32208573
Alignment:
Q  308 ttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa 369  Q
    |||| ||||| |||||||| ||||  ||| |||||||||||| |||||||||||||||||||    
T  32208634 tttttccgctgatttgcttgattagatttccaattatttaacttaacaaattccatctaaaa 32208573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 17011026 - 17011074
Alignment:
Q  266 tatttattaattttgttacctctgcagcaatttaacctaattttttccc 314  Q
    ||||||||||||||||||  |||||||||| |||||||||||| |||||    
T  17011026 tatttattaattttgttaagtctgcagcaacttaacctaatttcttccc 17011074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 27441587 - 27441547
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  27441587 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 27441547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 19121169 - 19121216
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 312  Q
    |||||||||||||||||||  ||||||||||||||| ||||| |||||    
T  19121169 ttatttattaattttgttagatctgcagcaatttaatctaatattttc 19121216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 17010917 - 17010963
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 311  Q
    |||||||||||||||||||  ||||||||||||||| | ||||||||    
T  17010917 ttatttattaattttgttaagtctgcagcaatttaatcaaatttttt 17010963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 33482488 - 33482438
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaatttttt 311  Q
    ||||||||||||||||||| |||| ||||||| || |||||||||| ||||    
T  33482488 atctttatttattaattttattacgtctgcagtaacttaacctaatatttt 33482438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 9698388 - 9698428
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  9698388 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 9698428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 25068140 - 25068184
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttt 309  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||    
T  25068140 ttatttattaattttgttacgtgtgcagctatttaacataatttt 25068184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 26466844 - 26466804
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||||||||| || ||||||||||| |||||||||    
T  26466844 tgtacaatggggtgtaggaataaagggtgtttatgtaacat 26466804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 26670064 - 26670104
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  26670064 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 26670104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 31109277 - 31109317
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||| |||||| ||||||| |||||||||||||||||||||    
T  31109277 tgtataatgggatgtatgattaaagggtgttcatgtaacat 31109317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 48076190 - 48076318
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48076190 ttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 48076289  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  48076290 taaaaaaatgcatcgcaccaatttcattc 48076318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 23952610 - 23952483
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||     
T  23952610 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcacgctcatttgctttattaggtttgcaattatttaacctaaaaaattccatt 23952511  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||||||||||    
T  23952510 taaaaaatgcatcgcaccaatttcattc 23952483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 36639172 - 36639302
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  36639172 ttatttattaattttgttacgtttgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 36639271  T
Q  365 t-aaaaaatgcatcgcaccaatttcattcat 394  Q
    | |||||||||||||||||||||||||||||    
T  36639272 taaaaaaatgcatcgcaccaatttcattcat 36639302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 268 - 392
Target Start/End: Original strand, 48076371 - 48076496
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 366  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |    
T  48076371 tttattaattttgttacgtctgcagcaatttaacctaatttttccccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaa 48076470  T
Q  367 aaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||||||||    
T  48076471 aaaaatgcatcgcaccaatttcattc 48076496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 261 - 391
Target Start/End: Original strand, 4941674 - 4941805
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  4941674 atctttatttattaattttgttacatctacaataatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 4941773  T
Q  361 catct-aaaaaatgcatcgcaccaatttcatt 391  Q
    ||||| ||||||||||||||||||||||||||    
T  4941774 catctaaaaaaatgcatcgcaccaatttcatt 4941805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 23952886 - 23952758
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  23952886 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacttaacaaattccatc 23952787  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||| ||||||||||||    
T  23952786 taaaaaaatgcatcgcgccaatttcattc 23952758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 54653755 - 54653627
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||    
T  54653755 ttatttattaattttgttacgtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcagttatttaacctaacaaattcaatc 54653656  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||| ||||||||||||||    
T  54653655 taaaaaaatgcatcacaccaatttcattc 54653627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 261 - 394
Target Start/End: Original strand, 2177260 - 2177394
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||||||||||| |||||  |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||     
T  2177260 atctttatttattaattctgttagatctgcagcaatttaatttaattttttcccgctcatttgctttattaggtttgcaattacttaacctaacaaattt 2177359  T
Q  361 catctaaaaa-atgcatcgcaccaatttcattcat 394  Q
    |||||||||| ||||||||||||||||||||||||    
T  2177360 catctaaaaacatgcatcgcaccaatttcattcat 2177394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 47768952 - 47769081
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  47768952 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcttcattaggtttgcaattatttaacctaacaaatttcatc 47769051  T
Q  365 t--aaaaaatgcatcgcaccaatttcattc 392  Q
    |  |||||||||||| ||||||||||||||    
T  47769052 ttaaaaaaatgcatcacaccaatttcattc 47769081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 258 - 392
Target Start/End: Complemental strand, 2481761 - 2481629
Alignment:
Q  258 aacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 357  Q
    ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||    
T  2481761 aacatctttatctattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgca---atttaacctaacaaa 2481665  T
Q  358 ttccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||| |||||||||||||||||||||||||||    
T  2481664 ttccatctaaaaaaatgcatcgcaccaatttcattc 2481629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 22292898 - 22293025
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||     
T  22292898 ttatttattaattttgctaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcaata 22292997  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
     |||||||||||||||||||||| ||||    
T  22292998 aaaaaaatgcatcgcaccaattttattc 22293025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 53144951 - 53144824
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  53144951 ttatttattaattttgttagatctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcatc 53144852  T
Q  365 taaaaa-atgcatcgcaccaatttcatt 391  Q
    |||||| |||||| | ||||||||||||    
T  53144851 taaaaatatgcattgtaccaatttcatt 53144824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 7821303 - 7821431
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||| ||||||||||    
T  7821303 ttatttattaattttgttaggtatgcagcaatttaacctaattttttcccgcccatttgctttattaatgttgcaattatttaacctaataaattccatc 7821402  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  7821403 taaaaaaatgcatcgcaccaatttcattc 7821431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 28379867 - 28379740
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  28379867 ttatttattaattttgttaggtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaac-aattccatc 28379769  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | ||||||||||||||||||| |||||||    
T  28379768 taaaaaaatgcatcgcaccaagttcattc 28379740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 261 - 392
Target Start/End: Complemental strand, 52689728 - 52689596
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||||||||||||| |||  ||||||  |||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||     
T  52689728 atctttatttattaattttattaggtctgcattaatttatcctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaattt 52689629  T
Q  361 catctaa-aaaatgcatcgcaccaatttcattc 392  Q
    ||||||| |||||||||||||||||||||||||    
T  52689628 catctaaaaaaatgcatcgcaccaatttcattc 52689596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 21585662 - 21585535
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  21585662 ttatttattaattttgttacgtctgcaacaatttaacttaatttttttcctctcatttgctttattaggtttgcaattatttaacttaacaaatttcatc 21585563  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||| |||| |||||||||||||    
T  21585562 taaaaaatgtatcgtaccaatttcattc 21585535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 24049565 - 24049692
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  24049565 ttatttattaattttgttaggtgtgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacgaatttcatc 24049664  T
Q  365 t-aaaaaatgcatcgcaccaatttcatt 391  Q
    | |||||||||||| |||||||||||||    
T  24049665 taaaaaaatgcatcacaccaatttcatt 24049692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 43161846 - 43161719
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  43161846 ttatttattaatcttgttacgtctgcaacaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatc 43161747  T
Q  365 taa-aaaatgcatcgcaccaatttcatt 391  Q
    ||| ||||| ||||||||||||| ||||    
T  43161746 taaaaaaatacatcgcaccaattccatt 43161719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 7796785 - 7796913
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||| |||     
T  7796785 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggattgtaattatttaacctaacaaatttcatt 7796884  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||| ||||||    
T  7796885 taaaaaaatgcatcgcaccaatctcattc 7796913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 382
Target Start/End: Original strand, 48076545 - 48076664
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  48076545 ttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaaattccatc 48076644  T
Q  365 t--aaaaaatgcatcgcacc 382  Q
    |  |||||||||||||||||    
T  48076645 taaaaaaaatgcatcgcacc 48076664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 268 - 367
Target Start/End: Original strand, 44500675 - 44500774
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa 367  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  44500675 tttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacgtaacaaattccatctaa 44500774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 12796226 - 12796096
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||  | || ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  12796226 ttatttattaattttattaggtatgtagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaatctaacaaattccatc 12796127  T
Q  365 taaaaa-atgcatcgcaccaatttcattcat 394  Q
    |||||| |||||||||||||| |||||||||    
T  12796126 taaaaatatgcatcgcaccaacttcattcat 12796096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 7821519 - 7821647
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||  ||||| ||||    
T  7821519 ttatttattaattttgttaggtctggagcaatttaacctaattttttactgctcatttgctttattaggtttgtaattatttaacctacaaaatttcatc 7821618  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  7821619 taaaaaaatgcatcgcaccaatttcattc 7821647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 29967179 - 29967310
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||||||||    
T  29967179 ttatttattaattttgttaggtttgcagcaacttaacctaattttttcccgctcatttgttttattagatttgcaattatataacctaacaaattccatc 29967278  T
Q  365 t--aaaaaatgcatcgcaccaatttcattcat 394  Q
    |  ||||||||||| ||| |||||||||||||    
T  29967279 taaaaaaaatgcattgcatcaatttcattcat 29967310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 276 - 392
Target Start/End: Original strand, 8118608 - 8118725
Alignment:
Q  276 ttttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgc 374  Q
    ||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||    
T  8118608 ttttgttaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgc 8118707  T
Q  375 atcgcaccaatttcattc 392  Q
     |||||||||||||||||    
T  8118708 ttcgcaccaatttcattc 8118725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 8397848 - 8397720
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| | |||| |||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  8397848 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttctgctcgtttgttttattaggtttgcaattatttaacttaacaaatttcatc 8397749  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| ||||||||| |||||| ||||||||    
T  8397748 taaaaaaatgcattgcaccattttcattc 8397720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 388
Target Start/End: Original strand, 36639345 - 36639469
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||||||| ||||    
T  36639345 ttatatattaattttgttaggtttgcagcaatttaacctaattttttcccgttcattttctttattaggattgcaattatttaacctaacaaatttcatc 36639444  T
Q  365 t-aaaaaatgcatcgcaccaatttc 388  Q
    | |||||||| ||||||||||||||    
T  36639445 taaaaaaatgtatcgcaccaatttc 36639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 47631360 - 47631488
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | |||| |||||||||||||||| || | ||| ||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  47631360 ttatttattaattttgttaggtatgcatcaatttaacctaatttatttctgctaatttgctttgttaggtttgcaattatttaacctaacaaatttcatc 47631459  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  47631460 taaaaaaatgcatcgcaccaatttcattc 47631488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 8118383 - 8118510
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||| ||||| |||||| ||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  8118383 ttatttattaattt-gttacgtctgcaacaatttaacttaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 8118480  T
Q  365 t--aaaaaatgcatcgcaccaatttcattc 392  Q
    |  ||||||||||| |||||||||||||||    
T  8118481 taaaaaaaatgcattgcaccaatttcattc 8118510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 260 - 371
Target Start/End: Complemental strand, 28389882 - 28389771
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    |||| |||||||||||||||||||  | ||||| |||| | |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  28389882 catcattatttattaattttgttaggtttgcagtaattcatcctaatattttcccgctcatttgctttattaggtttgcatttatttaacctaacaaatt 28389783  T
Q  360 ccatctaaaaaa 371  Q
    ||||||||||||    
T  28389782 ccatctaaaaaa 28389771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 265 - 390
Target Start/End: Original strand, 7809348 - 7809474
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||| |||||||||||||  | |||| ||||| ||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||||| ||||    
T  7809348 ttattcattaattttgttaggtatgcaacaattgaacctaatttttttctgctcatttgctttattaggtttgtaattatttaacctaaaaaatttcatc 7809447  T
Q  365 t-aaaaaatgcatcgcaccaatttcat 390  Q
    | |||||||||||||||||||||||||    
T  7809448 taaaaaaatgcatcgcaccaatttcat 7809474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 296 - 392
Target Start/End: Complemental strand, 21581351 - 21581253
Alignment:
Q  296 tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgca-tcgcaccaatttcattc 392  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  21581351 tttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcattcgcaccaatttcattc 21581253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 275 - 392
Target Start/End: Original strand, 22292701 - 22292819
Alignment:
Q  275 attttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta-aaaaatg 373  Q
    |||||||||  ||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  22292701 attttgttaggtctgcaataatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaataccatctagaaaaatg 22292800  T
Q  374 catcgcaccaatttcattc 392  Q
    ||| | | |||||||||||    
T  22292801 catggtatcaatttcattc 22292819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 28813225 - 28813355
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | | || |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||| |||||||| ||||    
T  28813225 ttatttattaattttgttaggtttacaacaatttaatctaattttttcc-gctcatttgctttattaggtttgtaattatttaaccaaacaaatttcatc 28813323  T
Q  365 t--aaaaaatgcatcgcaccaatttcattcat 394  Q
    |  ||||||||||| |||||||||||||||||    
T  28813324 taaaaaaaatgcattgcaccaatttcattcat 28813355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 28380077 - 28379956
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| |||||||||||||||||| |  ||||||||| ||||||| |||||||||||||||||||||||||||||       
T  28380077 ttatttattaattttgttaggtctgcaccaatttaacctaattttt-cttgctcatttgttttattaggtttgcaattatttaacctaacaaattcc--- 28379982  T
Q  365 taaaaaatgcatcgcaccaatttcattcat 394  Q
        ||||||||||||||||||||||||||    
T  28379981 ----aaatgcatcgcaccaatttcattcat 28379956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 32010789 - 32010682
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacct-aacaaattccat 363  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||| |||||||| ||||| |||||||| |||| ||||||||||||    
T  32010789 ttatttattaattttgttacgtctgcagtaatttaaactaatttttttccgctcattttctttattaggtttgtaattattttacctaaacaaattccat 32010690  T
Q  364 ctaaaaaa 371  Q
    ||||||||    
T  32010689 ctaaaaaa 32010682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 290 - 394
Target Start/End: Complemental strand, 43162006 - 43161898
Alignment:
Q  290 cagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct----aaaaaatgcatcgcaccaat 385  Q
    |||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| |    ||||||||||| ||||||||    
T  43162006 cagcaatttaacttaactttttcacgctcatttgctttattaggtttgcaattatttaacttaacaaattccatttaaaaaaaaaatgcattgcaccaat 43161907  T
Q  386 ttcattcat 394  Q
    |||||||||    
T  43161906 ttcattcat 43161898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 307 - 392
Target Start/End: Complemental strand, 8479206 - 8479122
Alignment:
Q  307 tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 392  Q
    ||||| |||||||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8479206 ttttttccgctcatttgctttattagatttgcaattatt-aacctaacaaatttcatctaaaaaatgcatcgcaccaatttcattc 8479122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 47631539 - 47631667
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||||| |  |||||| |||||||||||||||| |||  |||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  47631539 ttatttattaattttgtcaggtctgcatcaatttaacctaatttattct-gctcttttgctttattaggtttgcaattatttaacctaacaaatt-catc 47631636  T
Q  365 ---taaaaaatgcatcgcaccaatttcattc 392  Q
        |||||||||||||| ||||||||||||    
T  47631637 caaaaaaaaatgcatcgccccaatttcattc 47631667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 391
Target Start/End: Complemental strand, 47428513 - 47428394
Alignment:
Q  273 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaa 371  Q
    |||||||||||| | |||||||| |||||||||| ||||||| | |||||| | ||||| ||| ||| | ||||||||||||||||||||||||| ||||    
T  47428513 taattttgttacatatgcagcaacttaacctaatattttccctcccatttgttgtattaggttagcagtaatttaacctaacaaattccatctaaaaaaa 47428414  T
Q  372 tgcatcgcaccaatttcatt 391  Q
    |||||| |||||||||||||    
T  47428413 tgcatctcaccaatttcatt 47428394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 294 - 387
Target Start/End: Original strand, 7809561 - 7809655
Alignment:
Q  294 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaattt 387  Q
    |||||||||||||||||| | |||||||||||||||||  |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  7809561 aatttaacctaatttttttctgctcatttgctttattagatttgtaattatttaacctaaaaaatttcatctaaaaaaatgcatcgcaccaattt 7809655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 392
Target Start/End: Original strand, 8079013 - 8079146
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaat 358  Q
    |||| |||||||||||||||||||  |||| |||||||||| |||||||||| |||||||||||| | ||||| ||| ||| |  |||||||||||||||    
T  8079013 catcattatttattaattttgttagttctggagcaatttaagctaattttttccccgctcatttgttgtattaggttagcagtagtttaacctaacaaat 8079112  T
Q  359 tccatctaaaaa-atgcatcgcaccaatttcattc 392  Q
    |||||||||||| |||||| |||||||||| ||||    
T  8079113 tccatctaaaaagatgcat-gcaccaattttattc 8079146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 8079327 - 8079401
Alignment:
Q  297 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa 371  Q
    |||||||||||||||||  ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  8079327 ttaacctaattttttcctactcattacctttattaggtttgcaattatttaacctaacaaattccatctaaaaaa 8079401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 15456295 - 15456363
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 336  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  15456295 tttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15456363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 15463679 - 15463747
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 336  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  15463679 tttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15463747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 24046065 - 24046123
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttg 323  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  24046065 ttatttattaattttgttaggtgtgcagcaatttaacctaattttttcccgctcatttg 24046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 24049337 - 24049411
Alignment:
Q  319 atttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||| | ||||||||    
T  24049337 atttgctttattaggtttgcaattatttaacctgacaaatttcatctaaaaaaatgcatcgcactagtttcattc 24049411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 368
Target Start/End: Original strand, 8078897 - 8078997
Alignment:
Q  270 tattaattttgttacctctgcagcaatttaacctaatttttt-cccgctca-tttgctttattatgtttgcaattatttaacctaacaaattccatctaa 367  Q
    ||||||||||||||  |||| |||||||||| |||||||||| |||||||| ||| || ||||||||| ||| |  ||||||||||||||||||||||||    
T  8078897 tattaattttgttaggtctgtagcaatttaagctaattttttccccgctcattttactgtattatgttagcagtagtttaacctaacaaattccatctaa 8078996  T
Q  368 a 368  Q
    |    
T  8078997 a 8078997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 394
Target Start/End: Complemental strand, 7526556 - 7526420
Alignment:
Q  259 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 358  Q
    ||||| || ||||| |||||| |||  |||||||||| ||||||||||  |||||| || |  ||||  | || ||| ||| | ||||||||||||||||    
T  7526556 acatccttgtttatcaattttattaggtctgcagcaacttaacctaataatttccctctaaaatgctgaagtaggttagcagtaatttaacctaacaaat 7526457  T
Q  359 tccatctaaaaa-atgcatcgcaccaatttcattcat 394  Q
    |||||||||||| ||||||| || |||||||||||||    
T  7526456 tccatctaaaaatatgcatcacatcaatttcattcat 7526420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 41852188 - 41852121
Alignment:
Q  328 attatgtttgcaattatttaacctaacaaattccatctaa--aaaatgca-tcgcaccaatttcattc 392  Q
    |||| ||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||||||||    
T  41852188 attaggtttgcaattatttaacctaacaaatttcatctaaaaaaaatgcattcgcaccaatttcattc 41852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 2526941 - 2526990
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 314  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  2526941 ttatttattaattttggtaggtctgcagcaatttaacctaattttttccc 2526990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 23952658 - 23952613
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttt 310  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  23952658 ttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 23952706 - 23952661
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttt 310  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  23952706 ttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 311
Target Start/End: Original strand, 8079456 - 8079502
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 311  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  8079456 ttatttattaattttgttacgtctgcagcagtttaacctaatatttt 8079502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 712005 - 711965
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  712005 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 711965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 1771321 - 1771361
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  1771321 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 1771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 3756301 - 3756341
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  3756301 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 3756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 28988518 - 28988478
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  28988518 tgtacaatgaggtgtatgaataaagggtgttcatgtaacat 28988478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 18002170 - 18002111
Alignment:
Q  265 ttatttattaattttgttacc---tctgcagcaatttaacctaattttttcccgctcatt 321  Q
    |||||||||||||||||||     |||||| ||| |||||||||||||||||||||||||    
T  18002170 ttatttattaattttgttattaggtctgcaacaagttaacctaattttttcccgctcatt 18002111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 47428347 - 47428298
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 314  Q
    |||||||||||||||||||  ||| || |||||||||||||| |||||||    
T  47428347 ttatttattaattttgttagatctacaacaatttaacctaatattttccc 47428298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 960925 - 960965
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  960925 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 960965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 17619207 - 17619247
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  17619207 tgtacaatagggtgtatgattaaaaggtgttcatgtaacat 17619247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 32728402 - 32728362
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  32728402 tgtacaatagggtgtatgattaaaggatgttcatgtaacat 32728362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 41878451 - 41878411
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| ||||||||| ||||| |||||||||||||||    
T  41878451 tgtacaatgaggtgtatgaataaagagtgttcatgtaacat 41878411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 43514741 - 43514781
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  43514741 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 43514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 46827761 - 46827801
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  46827761 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 46827801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 55966401 - 55966441
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  55966401 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 55966441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 51113906 - 51114036
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  51113906 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgttcatttactttattaggtttgcaattatttaacctaacaaattccatc 51114005  T
Q  365 t-aaaaaatgcatcgcaccaatttcattcat 394  Q
    | |||||||||||||||||||||||||||||    
T  51114006 taaaaaaatgcatcgcaccaatttcattcat 51114036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 27296162 - 27296291
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  27296162 ttatttattaattttgttacgtctgcaacaatttaacctaatttttccccgcttatttgctttattaggtttgcaattatttaacctaataaattccatc 27296261  T
Q  365 taaaaaatgcatcgcaccaatttcattcat 394  Q
    ||||||||||||||||||||||||||||||    
T  27296262 taaaaaatgcatcgcaccaatttcattcat 27296291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 318555 - 318683
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  318555 ttatttattaattttgttacgtctgcagcaatttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 318654  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  318655 taaaaaaatgcatcgcaccaatttcattc 318683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 1156171 - 1156043
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1156171 ttatttattaatattgttacggctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 1156072  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  1156071 taaaaaaatgcatcgcaccaatttcattc 1156043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 44263089 - 44263217
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44263089 ttatttattaattttgttaagtctgcagcaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 44263188  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  44263189 taaaaaaatgcatcgcaccaatttcattc 44263217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 5428528 - 5428655
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  5428528 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 5428627  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||| |||||||||||||||||    
T  5428628 taaaaaatgcttcgcaccaatttcattc 5428655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 42492271 - 42492142
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42492271 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatc 42492172  T
Q  365 taa--aaaatgcatcgcaccaatttcattc 392  Q
    |||  |||||||||||||||||||||||||    
T  42492171 taaaaaaaatgcatcgcaccaatttcattc 42492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 261 - 386
Target Start/End: Original strand, 44262660 - 44262785
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  44262660 atctttatttattaattttgttaggtctgcagcaatttaacctaatttttttccactcatttgctttattacgtttgcaattatttaacctaacaaattc 44262759  T
Q  361 catctaaaaaatgcatcgcaccaatt 386  Q
    ||||||||||||||| ||||||||||    
T  44262760 catctaaaaaatgcaacgcaccaatt 44262785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 265 - 382
Target Start/End: Original strand, 51114090 - 51114208
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51114090 ttatttattaattttgttacgtctgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 51114189  T
Q  365 t-aaaaaatgcatcgcacc 382  Q
    | |||||||||||||||||    
T  51114190 taaaaaaatgcatcgcacc 51114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 38684015 - 38684142
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  38684015 ttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcgattatttaacctaacaaattccatc 38684114  T
Q  365 t-aaaaaatgcatcgcaccaatttcatt 391  Q
    | ||||||||||||||||||||||||||    
T  38684115 taaaaaaatgcatcgcaccaatttcatt 38684142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 16165792 - 16165663
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  16165792 ttatttattaattttgttaggtctgtagcaatttaacctaattttttcccgatcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 16165693  T
Q  365 taa--aaaatgcatcgcaccaatttcattc 392  Q
    |||  |||||||||||||||||||||||||    
T  16165692 taaaaaaaatgcatcgcaccaatttcattc 16165663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 51113723 - 51113852
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  51113723 ttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatc 51113822  T
Q  365 t--aaaaaatgcatcgcaccaatttcattc 392  Q
    |  |||||||||||||||||||||||||||    
T  51113823 taaaaaaaatgcatcgcaccaatttcattc 51113852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 27296337 - 27296465
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  27296337 ttatttattaattttgttacgtctgcaacaatttaacctaattttttctcgctcattttctttattaggtttgcaattatttaacctaacaaatttcatc 27296436  T
Q  365 ta-aaaaatgcatcgcaccaatttcattc 392  Q
    || |||||| |||||||||||||||||||    
T  27296437 tataaaaatacatcgcaccaatttcattc 27296465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 261 - 391
Target Start/End: Original strand, 21617752 - 21617883
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||| |||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  21617752 atctttattcattaattttgttaggtctgcattaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 21617851  T
Q  361 catct-aaaaaatgcatcgcaccaatttcatt 391  Q
    ||||| |||||||||||||||| |||||||||    
T  21617852 catctaaaaaaatgcatcgcactaatttcatt 21617883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 42497397 - 42497267
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  42497397 ttatttattaattttgataggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 42497298  T
Q  365 t---aaaaaatgcatcgcaccaatttcattc 392  Q
    |   ||||||||||| |||||||||||||||    
T  42497297 tgaaaaaaaatgcattgcaccaatttcattc 42497267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 3227328 - 3227200
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3227328 ttatttattaattttgttagatctgcatcaatttaacctaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 3227230  T
Q  365 taa--aaaatgcatcgcaccaatttcattc 392  Q
    |||  ||||||||| |||||||||||||||    
T  3227229 taaaaaaaatgcattgcaccaatttcattc 3227200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 52740700 - 52740829
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| |||    
T  52740700 ttatttattaattttgttaggtttgaagcaatttaacctaattttttcccgctcatttgctttattaggtttacaattatttaacttaacaaattcaatc 52740799  T
Q  365 t--aaaaaatgcatcgcaccaatttcattc 392  Q
    |  |||||||||||||||||||||||||||    
T  52740800 taaaaaaaatgcatcgcaccaatttcattc 52740829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 369
Target Start/End: Complemental strand, 42497039 - 42496935
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  42497039 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgttttattagatttgcaattatttaacctaacaaattccatc 42496940  T
Q  365 taaaa 369  Q
    |||||    
T  42496939 taaaa 42496935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 1647543 - 1647670
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||||| | ||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  1647543 ttatttattaattttgttaggtctgcagcagtttaacctaagttttttctgctcatttgctttattaggtttggaattatttaacctaacaaatttcatc 1647642  T
Q  365 t-aaaaaatgcatcgcaccaatttcatt 391  Q
    | |||||||| |||||||||||||||||    
T  1647643 taaaaaaatgaatcgcaccaatttcatt 1647670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 266 - 392
Target Start/End: Complemental strand, 4100691 - 4100565
Alignment:
Q  266 tatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||| |||     
T  4100691 tatttattaattttgttaggtctgcagtaatttaacctaatttttttcccgctcatttgttttattaagtttgcaattatttaacttaacaaatttcata 4100592  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||| ||||||||||||||||||||    
T  4100591 taaaaaa-gcatcgcaccaatttcattc 4100565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 44263310 - 44263437
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| |||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  44263310 ttatttattaattttgttaggtctgcatcaatataacctaattttttctcgctcatttgccttattaggtttgcaattatttaacctaacaaattacatc 44263409  T
Q  365 -taaaaaatgcatcgcaccaatttcatt 391  Q
      ||||||||||||||| ||||||||||    
T  44263410 gaaaaaaatgcatcgcatcaatttcatt 44263437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 5428933 - 5429046
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  5428933 ttatttattaattttgttagatctgcagcaatttaaactaatttttttccgctcatctgctttattaggtttgcaattatttaagctaacaaattccatc 5429032  T
Q  365 taaaa-aatgcatc 377  Q
    ||||| ||||||||    
T  5429033 taaaataatgcatc 5429046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 260 - 392
Target Start/End: Original strand, 5429043 - 5429180
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaatttttt----cccgctcatttgctttattatgtttgcaattatttaacctaaca 355  Q
    |||| ||||||||||| |||||||  | ||||||||||||||||||||| ||    |||||||| ||||||||||| |||||||||||||||||||||||    
T  5429043 catccttatttattaactttgttaggtgtgcagcaatttaacctaatttattttcccccgctcaattgctttattaggtttgcaattatttaacctaaca 5429142  T
Q  356 aattccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  5429143 aattccatctaaaaaaatgcatagcaccaatttcattc 5429180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 392
Target Start/End: Complemental strand, 6537757 - 6537629
Alignment:
Q  269 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaa 368  Q
    |||||||||||||||  || ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  6537757 ttattaattttgttaggtcagcaacaatttaacttaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaaa 6537658  T
Q  369 aa-----atgcatcgcaccaatttcattc 392  Q
    ||     |||||| |||||||||||||||    
T  6537657 aaaatgcatgcatggcaccaatttcattc 6537629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 28950274 - 28950148
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 366  Q
    |||||||||||||||||| || ||| ||||||||| ||||||||| |||| ||||||||||||||  |||| ||||||||||||||||||||| ||||||    
T  28950274 atttattaattttgttacgtccgcaacaatttaacttaatttttttccgcacatttgctttattagatttgaaattatttaacctaacaaatttcatcta 28950175  T
Q  367 a-aaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||| ||||||||||||||    
T  28950174 aaaaaatgcatctcaccaatttcattc 28950148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 18912327 - 18912456
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttg-caattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| |||||  ||||||||||| ||||||||| |||    
T  18912327 ttatttattaattttgttatgtctgcagcaatttaacctaatttttttccgcccatttgctttattaggtttgtaaattatttaacttaacaaatttcat 18912426  T
Q  364 ct-aaaaaatgcatcgcaccaatttcattc 392  Q
    || ||||||||||| ||| |||||||||||    
T  18912427 ctaaaaaaatgcatagcatcaatttcattc 18912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 265 - 353
Target Start/End: Complemental strand, 28950365 - 28950277
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 353  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  28950365 ttatttattaattttgttacgtctccagcaatttaacctaattttttcccgctaatttgctttattaggtttgcaattatttaacctaa 28950277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 42497574 - 42497448
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||  |||||||||  ||||||| ||||| ||||||||||| ||||||||| |||     
T  42497574 ttatttattaattttgttaggtctgcagtaatttaacttaattttttttcgctcatttattttattaggtttgtaattatttaacttaacaaatttcatt 42497475  T
Q  365 taaaaaatgcatcgcaccaatttcatt 391  Q
    ||||||||| |||||||||||||||||    
T  42497474 taaaaaatgtatcgcaccaatttcatt 42497448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 51272598 - 51272492
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  51272598 ttatttattaattttgttaggtctacaacaatttaacctaatttttttctgctcatttgctttattaggtttgcaattatttaacctaataaattccatc 51272499  T
Q  365 taaaaaa 371  Q
     ||||||    
T  51272498 aaaaaaa 51272492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 267 - 387
Target Start/End: Complemental strand, 28949995 - 28949875
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 365  Q
    |||||||||||||||||| |||| ||| |||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||| ||| |     
T  28949995 atttattaattttgttacgtctgaagctatttaacctaattttt-cccgcacatttgctttattaggtttgtaattatttaacctaacaaatttcatata 28949897  T
Q  366 aaaaaatgcatcgcaccaattt 387  Q
    ||||||||||||||| ||||||    
T  28949896 aaaaaatgcatcgcatcaattt 28949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 273 - 391
Target Start/End: Complemental strand, 4100890 - 4100771
Alignment:
Q  273 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaa 371  Q
    |||||||||||  ||||||||||||||| |||||||||| ||||||||| | |||||||  |||||||||||||||||||| ||||| ||||||| ||||    
T  4100890 taattttgttaggtctgcagcaatttaatctaatttttttccgctcattagttttattagatttgcaattatttaacctaaaaaatttcatctaaaaaaa 4100791  T
Q  372 tgcatcgcaccaatttcatt 391  Q
    || |||||||||||||||||    
T  4100790 tggatcgcaccaatttcatt 4100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 44099747 - 44099650
Alignment:
Q  294 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||    
T  44099747 aatttaacctaattttttttcgctcatttgctttattaggtttgcaattatttaacctaataaatttcatct-aaaaatgcattgcaccaatttcattc 44099650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 30083978 - 30084107
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattt-tttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  || |||||||||||| ||||||| ||| ||||| ||||||||||||| ||||| ||||||||||||  | |||||||||    
T  30083978 ttatttattaattttgttaggtccgcagcaatttaatctaatttcttttccgcttatttgctttattaggtttgaaattatttaaccatataaattccat 30084077  T
Q  364 ct-aaaaaatgcatcgcaccaatttcattc 392  Q
    || |||||||||||||||||| ||||||||    
T  30084078 ctaaaaaaatgcatcgcaccattttcattc 30084107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 264 - 371
Target Start/End: Original strand, 18912214 - 18912322
Alignment:
Q  264 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttg-caattatttaacctaacaaattcca 362  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||| |||||||| |||||  ||||||||||| ||||||||| ||    
T  18912214 tttatttattaattttgttatgtctgcagcaatttaatctaatttttttccgctcatttactttattaggtttgtaaattatttaacttaacaaatttca 18912313  T
Q  363 tctaaaaaa 371  Q
    |||||||||    
T  18912314 tctaaaaaa 18912322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 265 - 356
Target Start/End: Original strand, 33375630 - 33375721
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 356  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||    
T  33375630 ttatttattaattttgttacgtctcaagcaatttaacctaatttttctccgctcatttactttattaggtttgcaattatttaacctaacaa 33375721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 273 - 391
Target Start/End: Original strand, 24595066 - 24595187
Alignment:
Q  273 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaat--tatttaacctaacaaattccatctaa-aa 369  Q
    |||||||||||| ||   |||||||||||||||||||||| |||| | || |||||||| |||||||||  |||||||||||||||||| ||||||| ||    
T  24595066 taattttgttacgtcgatagcaatttaacctaattttttctcgcttacttactttattaggtttgcaattatatttaacctaacaaatttcatctaacaa 24595165  T
Q  370 aatgcatcgcaccaatttcatt 391  Q
    ||||||||||||||||||||||    
T  24595166 aatgcatcgcaccaatttcatt 24595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 42497217 - 42497111
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||| || |||||||||||||||||||| | | |||||||||||||| |||| |||||||||||| ||| ||||||||||    
T  42497217 ttatttattaattttgttagatctacaacaatttaacctaattttttcgctcacatttgctttattaggtttacaattatttaacataataaattccatc 42497118  T
Q  365 taaaaaa 371  Q
    |||||||    
T  42497117 taaaaaa 42497111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 297 - 394
Target Start/End: Original strand, 52584966 - 52585064
Alignment:
Q  297 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 394  Q
    |||||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  52584966 ttaacctaattttttcccacttatttgctttattaagtttgtaattatttaacctaacaaatttcatctaaaaaaatgaattgcaccaatttcattcat 52585064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 28950093 - 28950016
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatt 342  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  28950093 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaatt 28950016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 45417655 - 45417578
Alignment:
Q  316 ctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  45417655 ctcatttgctttattaggtttgcaattatttaacctaacaaattaaatctaaaaaaatgcatcgcaccaatttcattc 45417578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 394
Target Start/End: Original strand, 12115359 - 12115435
Alignment:
Q  319 atttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 394  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  12115359 atttgctttattaggtttggaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcat 12115435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 24595255 - 24595321
Alignment:
Q  292 gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 358  Q
    |||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  24595255 gcaatttaacttcattttttcctgctcatttgctttattaggtttgcaattatttaacctaaaaaat 24595321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 43761946 - 43762075
Alignment:
Q  265 ttatttattaatttt-gttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    ||||||||||||||| ||||  | | || |||||||||||||| |||||| | ||||||  | ||||| ||| ||| | |||||| |||||||||| |||    
T  43761946 ttatttattaatttttgttaggtttacaacaatttaacctaatattttccggttcattttgtgtattaggttagcagtaatttaatctaacaaatttcat 43762045  T
Q  364 ctaaaaaa-tgcatcgcaccaatttcattc 392  Q
    |||||||| |||||||||||||||||||||    
T  43762046 ctaaaaaagtgcatcgcaccaatttcattc 43762075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 6537536 - 6537465
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 336  Q
    |||||||||||||||||||  |||| | ||||||||| |||||||||||| |||||||||||||||| ||||    
T  6537536 ttatttattaattttgttaggtctgtaacaatttaacttaattttttcccactcatttgctttattaggttt 6537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 320
Target Start/End: Complemental strand, 42492335 - 42492280
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcat 320  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  42492335 ttatttattaattttgttacgtctacagcaatttaacctatttttttcccgctcat 42492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 311
Target Start/End: Complemental strand, 45417741 - 45417699
Alignment:
Q  269 ttattaattttgttacctctgcagcaatttaacctaatttttt 311  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  45417741 ttattaattttgttaggtctgcagcaatttaacctaatttttt 45417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 47790726 - 47790778
Alignment:
Q  343 atttaacctaacaaattccatctaaaa---aatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||| |||||||   |||||||||||||||||||||||    
T  47790726 atttaacctaacaaattccgtctaaaaaaaaatgcatcgcaccaatttcattc 47790778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 47790691 - 47790736
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaa 305  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||    
T  47790691 catccttatttattaattttgttaggtctgcagcaatttaacctaa 47790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 48552932 - 48552883
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 314  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||    
T  48552932 ttatttattaattttgttaagtctacagcaacttaacctaattttttccc 48552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 48553041 - 48552992
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 314  Q
    |||||||||||||||||||  | |||||||| ||||||||||||||||||    
T  48553041 ttatttattaattttgttaagtttgcagcaacttaacctaattttttccc 48552992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 14427392 - 14427352
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  14427392 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 14427352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 35003339 - 35003299
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35003339 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 35003299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 44112722 - 44112682
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  44112722 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 44112682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 48119673 - 48119633
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  48119673 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 48119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 48412031 - 48411972
Alignment:
Q  294 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 353  Q
    |||||||||||| ||||||||  |||||||||||||||  |||| |||||||||| ||||    
T  48412031 aatttaacctaaatttttccctttcatttgctttattaaatttgtaattatttaatctaa 48411972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 11928235 - 11928277
Alignment:
Q  343 atttaacctaacaaattccatctaaaaaatgcatcgcaccaattt 387  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  11928235 atttaacctaacaaattccatct--aaaatgcagcgcaccaattt 11928277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 52584880 - 52584930
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgct 317  Q
    |||||||||||||||||||| |  ||||||| ||||||||||||||| |||||    
T  52584880 ttatttattaattttgttacgt--gcagcaacttaacctaatttttttccgct 52584930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 5489821 - 5489781
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  5489821 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 5489781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 392
Target Start/End: Original strand, 24595313 - 24595341
Alignment:
Q  364 ctaaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||||||||||    
T  24595313 ctaaaaaatgcatcgcaccaatttcattc 24595341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 38113250 - 38113290
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||| ||||||    
T  38113250 tgtacaatagggtgtatgattaaagggtgttcatataacat 38113290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 38335963 - 38335923
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  38335963 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 38335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 41065198 - 41065158
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  41065198 tgtacaacagggtgtatgattaaagggtgttcatgtaacat 41065158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 43571141 - 43571181
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  43571141 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 43571181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 52740915 - 52740955
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaa 305  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  52740915 ttatttattaattttgttaggtctgcaacaatttaacctaa 52740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 46451470 - 46451598
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46451470 ttatttattaattttgttacgtctgcagtaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 46451569  T
Q  365 taaaa-aatgcatcgcaccaatttcattc 392  Q
    ||||| |||||||||||||||||||||||    
T  46451570 taaaataatgcatcgcaccaatttcattc 46451598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 47503159 - 47503031
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  47503159 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatc 47503060  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  47503059 taaaaaaatgcatcgcaccaatttcattc 47503031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 261 - 391
Target Start/End: Complemental strand, 53047697 - 53047567
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||     
T  53047697 atctttatttattaattttgttaggtctgcagcaatttaacataattttttcccgctcatttgctttgttaggtttgcaattatttaacctaacaaattt 53047598  T
Q  361 catctaaaaaatgcatcgcaccaatttcatt 391  Q
    ||| |||||||||||||||||||||||||||    
T  53047597 catttaaaaaatgcatcgcaccaatttcatt 53047567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 18094956 - 18095086
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  18094956 ttatttattaattttgttaggtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatgatttaacctaacaaattccatc 18095055  T
Q  365 -taaaaaatgcatcgcaccaatttcattcat 394  Q
     ||||||||| ||||||||||||||||||||    
T  18095056 ttaaaaaatgaatcgcaccaatttcattcat 18095086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 837309 - 837181
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||  |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  837309 ttatttattaattttattatgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 837210  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  837209 taaaaaaatgcatcgcaccaatttcattc 837181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 36643233 - 36643105
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36643233 ttatttattaattttgttacgtatgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 36643134  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||| ||||||||||||| ||||    
T  36643133 taaaaaaatgtatcgcaccaatttgattc 36643105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 267 - 388
Target Start/End: Original strand, 43017273 - 43017396
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 365  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||     
T  43017273 atttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatcta 43017372  T
Q  366 -aaaaaatgcatcgcaccaatttc 388  Q
     ||||||||||| |||||||||||    
T  43017373 aaaaaaatgcattgcaccaatttc 43017396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 38887471 - 38887343
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  38887471 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcata 38887372  T
Q  365 taaaaaa--tgcatcgcaccaatttcatt 391  Q
    |||||||  || |||||||||||||||||    
T  38887371 taaaaaaagtggatcgcaccaatttcatt 38887343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 262 - 392
Target Start/End: Original strand, 35560098 - 35560230
Alignment:
Q  262 tctttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||||||||||     
T  35560098 tctttatttattaattttgttacttctgcagcaatttaacctaattttttttcctctcatttgctttattaggtttgcaattatttaacctaacaaattt 35560197  T
Q  361 cat-ctaaaaaatgcatcgcaccaatttcattc 392  Q
    ||| | |||||||||||||||||||||||||||    
T  35560198 catccaaaaaaatgcatcgcaccaatttcattc 35560230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 260 - 394
Target Start/End: Original strand, 11454200 - 11454335
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    |||| |||||||||||||||||||  |||||| |||||||||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||    
T  11454200 catccttatttattaattttgttatgtctgcaacaatttaacctaattttttcccgctcatctactttatttggtttgcaattatttaacctaacaaatt 11454299  T
Q  360 ccatct-aaaaaatgcatcgcaccaatttcattcat 394  Q
     ||||| |||||||||||||||||||||||||||||    
T  11454300 tcatctaaaaaaatgcatcgcaccaatttcattcat 11454335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 18094741 - 18094871
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||     
T  18094741 ttatttattaattttgttaggtctgcagcaatttaacttaattttttcccgctaatttgctttattaggtttgcaattatttaacctaacaaatcccata 18094840  T
Q  365 t-aaaaaatgcatcgcaccaatttcattcat 394  Q
    | |||||| ||||||||||||||||||||||    
T  18094841 taaaaaaaagcatcgcaccaatttcattcat 18094871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 265 - 380
Target Start/End: Original strand, 11454562 - 11454679
Alignment:
Q  265 ttatttattaatttt-gttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11454562 ttatttattaatttttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatcatttaacctaacaaattccat 11454661  T
Q  364 c-taaaaaatgcatcgca 380  Q
    | ||||||||||||||||    
T  11454662 cttaaaaaatgcatcgca 11454679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 269 - 392
Target Start/End: Original strand, 37760501 - 37760625
Alignment:
Q  269 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat-ctaa 367  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||    
T  37760501 ttattaattttgttacgtctgcaacaatttaacctaaatttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatccaaa 37760600  T
Q  368 aaaatgcatcgcaccaatttcattc 392  Q
    |||||| ||||||||||||||||||    
T  37760601 aaaatgtatcgcaccaatttcattc 37760625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 40050850 - 40050977
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  40050850 ttatttatttattttgttagttctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaataatttaacctaacaaatt-catc 40050948  T
Q  365 ta-aaaaatgcatcgcaccaatttcattc 392  Q
    || ||||||||||||||||||||| ||||    
T  40050949 tacaaaaatgcatcgcaccaatttaattc 40050977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 20877322 - 20877194
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||| |||||   ||||||||||||||||||| ||||    
T  20877322 ttatttattaattttgttacgtctgcagcaatttaatctaattttttccctctcatttactttattaggtttgtcgttatttaacctaacaaatttcatc 20877223  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  20877222 taaaaaaatgcatcgcaccaatttcattc 20877194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 38887686 - 38887556
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc--ccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 362  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  38887686 ttatttattaattttattaggtctgcagcaatttaacctaatttttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcct 38887587  T
Q  363 tct-aaaaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||| ||||||||||    
T  38887586 tctaaaaaaatgcatcgcacaaatttcattc 38887556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 47503333 - 47503204
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    ||||||||||||||| |||| ||| |  |||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  47503333 ttatttattaattttattacgtctacgacaatttaacctattttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcat 47503234  T
Q  364 ctaa-aaaatgcatcgcaccaatttcattc 392  Q
    |||| |||||||||||||||||||||||||    
T  47503233 ctaaaaaaatgcatcgcaccaatttcattc 47503204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 45514524 - 45514419
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||| ||||    
T  45514524 ttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgttcatttactttatta-gtttgcaattatttaacctaataaatttcatc 45514426  T
Q  365 taaaaaa 371  Q
    |||||||    
T  45514425 taaaaaa 45514419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 11454381 - 11454512
Alignment:
Q  265 ttatttattaattttgtt---acctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 361  Q
    ||||||||||||||||||   || |||||||||||||| ||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||| | |    
T  11454381 ttatttattaattttgttgttacgtctgcagcaatttatcctaattttttct-gctcatttgctttattaggcttgcaattatttaacctaacaaacttc 11454479  T
Q  362 atct--aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||  |||||||||||||||||||||||||||    
T  11454480 atctaaaaaaaatgcatcgcaccaatttcattc 11454512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 294 - 392
Target Start/End: Original strand, 47519955 - 47520054
Alignment:
Q  294 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||||| |||||||||||| ||||| |||||    
T  47519955 aatttaacctaattttttcccgctcatttgctttattagggttgcaattatttaacctaaccaagtccatctaaagaaatgcatcgcatcaattccattc 47520054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 16015356 - 16015250
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||| ||||||||  ||| | | |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||| |||    
T  16015356 ttatttattagttttgttaggtctacggaaatttaacctaattttttcccgctcatttgctttattaggttaacaattatttaacctaacaaattctatc 16015257  T
Q  365 taaaaaa 371  Q
    |||||||    
T  16015256 taaaaaa 16015250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 267 - 391
Target Start/End: Original strand, 43819330 - 43819455
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 366  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||| |||  || | ||||||||||| || || ||||||    
T  43819330 atttattaattttgttaggtctgcagcaatttaacctaatattttcccgctcatttgctgtattaagttaacactaatttaacctaataattttcatcta 43819429  T
Q  367 aaa-aatgcatcgcaccaatttcatt 391  Q
    ||| ||||||| ||||||||||||||    
T  43819430 aaacaatgcattgcaccaatttcatt 43819455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 302 - 392
Target Start/End: Original strand, 46451320 - 46451412
Alignment:
Q  302 ctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct--aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  46451320 ctaatttttccccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatctaaaaaaaatgcatcgcaccaatttcattc 46451412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 47519956 - 47519871
Alignment:
Q  269 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac 354  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  47519956 ttattaattttgttagttttgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgtaattatttaacctaac 47519871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 38887901 - 38887806
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||||||||| | |  ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  38887901 ttatttattaattttatcaggtctgcagtaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacgtaacaaattc 38887806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 266 - 392
Target Start/End: Complemental strand, 21969111 - 21968986
Alignment:
Q  266 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 365  Q
    |||||||||||||| |||  || |||||||||||| |||||||||| |  |  ||||||| ||||| ||| ||| | |||||||||||||||||||||||    
T  21969111 tatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaattccatct 21969013  T
Q  366 aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||||||||    
T  21969012 aaaaaatgcatcgcaccaatttcattc 21968986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 266 - 392
Target Start/End: Complemental strand, 21991547 - 21991422
Alignment:
Q  266 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 365  Q
    |||||||||||||| |||  || |||||||||||| |||||||||| |  |  ||||||| ||||| ||| ||| | |||||||||||||||||||||||    
T  21991547 tatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaattccatct 21991449  T
Q  366 aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||||||||    
T  21991448 aaaaaatgcatcgcaccaatttcattc 21991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 380
Target Start/End: Original strand, 11453937 - 11454054
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||| | || |  ||||||| |||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11453937 ttatttattaattttgttacgtttgaaataatttaatctaatttttttctcgttcatttgctttattaggtttgcaattatttaacctaacaaattacat 11454036  T
Q  364 ct-aaaaaatgcatcgca 380  Q
    || |||||||||||||||    
T  11454037 ctaaaaaaatgcatcgca 11454054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 24365763 - 24365840
Alignment:
Q  294 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa 371  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||||||    
T  24365763 aatttaacctaattttttcccgctcatttgatttattaggtttgcaattatttaacctaacgaatttcatctaaaaaa 24365840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 11522532 - 11522662
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||| | | ||||||| ||||||| |||| ||||| |||||||||||||||| ||||    
T  11522532 ttatttattaattttgttaggtctacaacaatttaacctaatttttttcagttcatttgttttattaggtttacaattgtttaacctaacaaatttcatc 11522631  T
Q  365 taaaaa---atgcatcgcaccaatttcattc 392  Q
    ||||||   ||| | ||||||||||||||||    
T  11522632 taaaaatatatgaaccgcaccaatttcattc 11522662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 394
Target Start/End: Original strand, 11220780 - 11220906
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 366  Q
    ||||||||||||||||  ||||||||||||||||||||| |||| || || ||||||| ||||| ||| ||| | |||| |||||||||||| ||||| |    
T  11220780 tttattaattttgttaggtctgcagcaatttaacctaatatttttcc-cttatttgctgtattaggttagcagtaattttacctaacaaatttcatctaa 11220878  T
Q  367 aaaaatgcatcgcaccaatttcattcat 394  Q
    |||||||||| |||||||||||||||||    
T  11220879 aaaaatgcattgcaccaatttcattcat 11220906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 371
Target Start/End: Original strand, 46451078 - 46451181
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||| ||| |||||| ||||||||  ||||||||| |||||||||| ||   ||| |||||||||||||||||||||||||||| |||    
T  46451078 ttatttattaattttgatacgtctgcaacaatttaaattaatttttttccgctcatttcct---ttaagtttgcaattatttaacctaacaaattctatc 46451174  T
Q  365 taaaaaa 371  Q
    |||||||    
T  46451175 taaaaaa 46451181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 394
Target Start/End: Original strand, 52300747 - 52300841
Alignment:
Q  301 cctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 394  Q
    |||||||||||||||||||||| || ||||| ||| ||| | ||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  52300747 cctaattttttcccgctcatttactgtattaggttagcagtaatttaacctaacaaattccatttaaaaaaatgcattgcaccaatttcattcat 52300841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 369
Target Start/End: Original strand, 850932 - 851036
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||  ||| | || ||||||||||| ||||||||| ||||||||||  ||||||| ||||||||||||||||  ||||||||| ||||    
T  850932 ttatttattaatttttgtacatttgtagcaatttaacttaatttttttccgctcatttattttattaggtttgcaattatttaagttaacaaatttcatc 851031  T
Q  365 taaaa 369  Q
    |||||    
T  851032 taaaa 851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 51654074 - 51654138
Alignment:
Q  295 atttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  51654074 atttaacctaattttttcccgctcatttgttttattaggtttacaattatttaacctaacaaatt 51654138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 3847825 - 3847945
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||| ||        |   | ||||||||||||||||| ||||    
T  3847825 ttatttattaattttgttaggtctgcagcaatttaacctaatattttcgcgctcatttgctgta--------gtggtgatttaacctaacaaatttcatc 3847916  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  3847917 taaaaaaatgcatcgcaccaatttcattc 3847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 851039 - 851088
Alignment:
Q  339 aattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaattt 387  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  851039 aattatttaacctaacaaatttcatctaaaagaatgcatcgcaccaattt 851088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 25917546 - 25917426
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||  |||||||||| ||||||||||  |||||| || |  || |  |||| ||| |||   ||||||||||||||||||||||    
T  25917546 ttatttattaattttattaagtctgcagcaacttaacctaataatttccctctaaaatgttacattaggttagcagcaatttaacctaacaaattccatc 25917447  T
Q  365 taaaaaatgcatcgcaccaattt 387  Q
    |  |||||||| |||||||||||    
T  25917446 t--aaaatgcagcgcaccaattt 25917426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 46451252 - 46451299
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 312  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  46451252 ttatttattaattttgttacgtctccaacaatttaacctaattttttc 46451299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 54274787 - 54274824
Alignment:
Q  320 tttgctttattatgtttgcaattatttaacctaacaaa 357  Q
    |||||||||||| |||||||||||||||||||||||||    
T  54274787 tttgctttattaggtttgcaattatttaacctaacaaa 54274824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 4190320 - 4190360
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  4190320 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 4190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 369
Target Start/End: Original strand, 17755732 - 17755840
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||  |||||| || |  || |  ||||  || |||   ||||||||||||||||||    
T  17755732 atctttatttattaattttattaggtccgcagcaatttaacctaataatttccctctaaaatgttgcattagattagcagcaatttaacctaacaaattc 17755831  T
Q  361 catctaaaa 369  Q
    |||||||||    
T  17755832 catctaaaa 17755840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 369
Target Start/End: Original strand, 19057052 - 19057160
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||  |||||| || |  || |  ||||  || |||   ||||||||||||||||||    
T  19057052 atctttatttattaattttattaggtccgcagcaatttaacctaataatttccctctaaaatgttgcattagattagcagcaatttaacctaacaaattc 19057151  T
Q  361 catctaaaa 369  Q
    |||||||||    
T  19057152 catctaaaa 19057160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 25413726 - 25413686
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  25413726 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 25413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 54246203 - 54246243
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  54246203 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 54246243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 392
Target Start/End: Original strand, 54274725 - 54274779
Alignment:
Q  339 aattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||| ||||| |||||||||||||  ||||||| ||||    
T  54274725 aattatttaacctaacaaatttcatctaaaaaaatgcatcgtcccaattttattc 54274779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 9434169 - 9434129
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  9434169 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 9434129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 10457947 - 10457987
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  10457947 tgtacaatagggtgtatgattaaaaggtgttcatgtaacat 10457987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 36150175 - 36150135
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  36150175 tgtataatggggtgtatgaataaagggtattcatgtaacat 36150135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 40480794 - 40480754
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||||  ||||| |||||||||||||||||||||    
T  40480794 tgtacaatggggcatatgaataaagggtgttcatgtaacat 40480754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 42100733 - 42100693
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  42100733 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 42100693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 45126983 - 45127023
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  45126983 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 45127023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 47191080 - 47191120
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  47191080 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 47191120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 53581913 - 53581953
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||| |||||||| ||||| |||||||||||||||    
T  53581913 tgtacaatggagtgtatgaataaagagtgttcatgtaacat 53581953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 54237141 - 54237101
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  54237141 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 54237101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 6e-50; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 28612339 - 28612211
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28612339 ttatttattaattttgttagttttgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 28612240  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  28612239 taaaaaaatgcatcgcaccaatttcattc 28612211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 28611914 - 28611786
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  28611914 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgcttgattaggtttgcaattatttaacctaacaagttccatc 28611815  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||| ||||||    
T  28611814 taaaaaaatgcatcgcaccaatatcattc 28611786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 261 - 392
Target Start/End: Complemental strand, 41995863 - 41995731
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||||||  |||| | ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||    
T  41995863 atctttatttattaattttgttatgtctgaaacaatttaacctaattttttcctgttcatttgctttattaggtttgcaattatttaacctaacaaattc 41995764  T
Q  361 catctaaaaa-atgcatcgcaccaatttcattc 392  Q
    |||||||||| ||||||||||| ||||||||||    
T  41995763 catctaaaaacatgcatcgcacgaatttcattc 41995731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 261 - 391
Target Start/End: Original strand, 44256469 - 44256600
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||||     
T  44256469 atctttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcattttctttattaggttttcaagtatttaacctaataaattt 44256568  T
Q  361 catct-aaaaaatgcatcgcaccaatttcatt 391  Q
    ||||| ||||||||||||||||||||||||||    
T  44256569 catctaaaaaaatgcatcgcaccaatttcatt 44256600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 10129603 - 10129475
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||    
T  10129603 ttatttattaattttgttaggtctgcagcaatttaacctaatttgttctcgctcatttgctttattaggtttgcaattatttaacctaataaattctatc 10129504  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | ||||||| |||||||||||||||||||    
T  10129503 taaaaaaattcatcgcaccaatttcattc 10129475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 6348072 - 6348199
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||  ||||||||| ||||    
T  6348072 ttatttattaattttgttacgtctgcagcaatttaacataattttttctcgctcaattgctttattaggtttgcaattatttaatttaacaaatttcatc 6348171  T
Q  365 t-aaaaaatgcatcgcaccaatttcatt 391  Q
    | ||||||||||||||||||||||||||    
T  6348172 taaaaaaatgcatcgcaccaatttcatt 6348199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 260 - 392
Target Start/End: Complemental strand, 37131598 - 37131466
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  37131598 catccttatttattaattttgttagatctgcagcaatttaacctaatttttttccactcatttgctttatta-gtttgcaattatttaacttaacaaatt 37131500  T
Q  360 ccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
     ||||| |||||||||||| ||||||||||||||    
T  37131499 tcatctaaaaaaatgcatcacaccaatttcattc 37131466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 293 - 392
Target Start/End: Complemental strand, 5001777 - 5001677
Alignment:
Q  293 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcatt 391  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  5001777 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatt 5001678  T
Q  392 c 392  Q
    |    
T  5001677 c 5001677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 28612761 - 28612633
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||   ||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  28612761 ttatttattaattttgttagg-ctgcaacaatttaacctaatcttttcccgctcatt-gctttattaggtttgcaattatttaacctaacaaatttcatc 28612664  T
Q  365 taa-aaaatgcatcgcaccaatttcattcat 394  Q
    ||| |||||||||||||||||||||||||||    
T  28612663 taaaaaaatgcatcgcaccaatttcattcat 28612633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 11735910 - 11736037
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||    
T  11735910 ttatttattaattttgttaggt-tgcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatc 11736008  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | ||||||||||||||||| |||||||||    
T  11736009 taaaaaaatgcatcgcaccgatttcattc 11736037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 28612975 - 28612846
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatg-tttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| ||||||||||||||    
T  28612975 ttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgttcatttgttttattaggtttttcaattatttaatctaacaaattccat 28612876  T
Q  364 ctaaaa-aatgcatcgcaccaatttcattc 392  Q
    |||||| |||||||||||||||||||||||    
T  28612875 ctaaaataatgcatcgcaccaatttcattc 28612846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 28612127 - 28611999
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||    |||    
T  28612127 ttatttattaattttgttaggtctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattatttaacctaaaaaaaattatc 28612028  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  28612027 taaaaaaatgcatcgcaccaatttcattc 28611999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 29550133 - 29550265
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat----gtttgcaattatttaacctaacaaattc 360  Q
    ||||||||||||||| |||  |||||| ||||||||||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||||||    
T  29550133 ttatttattaattttattaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagctaggtttgcaattatttaacctaacaaattc 29550232  T
Q  361 catct--aaaaaatgcatcgcaccaatttcatt 391  Q
     ||||  ||||||||||||||||||||||||||    
T  29550233 aatctaaaaaaaatgcatcgcaccaatttcatt 29550265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 289 - 391
Target Start/End: Original strand, 11736325 - 11736428
Alignment:
Q  289 gcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaattt 387  Q
    |||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  11736325 gcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaattt 11736424  T
Q  388 catt 391  Q
    ||||    
T  11736425 catt 11736428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 3249905 - 3249777
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| |||||||||||||| |||| ||||| ||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  3249905 ttatttattaattttgttagatctgcaacaatttaacctaatatttttccgcttatttgctgtattaggttagcagtaatttaacctaacaaatttcatc 3249806  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  3249805 taaaaaaatgcatcgcaccaatttcattc 3249777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 5001627 - 5001499
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| || ||||||||||||||| |||  || ||||||||||||| ||||| ||||    
T  5001627 ttatttattaattttgttaggtctgcagcaatttaaactaattttttctcgttcatttgctttattaggttaacagttatttaacctaaaaaatttcatc 5001528  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||| ||||    
T  5001527 taaaaaaatgcatcgcaccaatttaattc 5001499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 28612551 - 28612424
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||   ||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||| |||||  |||    
T  28612551 ttatttattaattttgttagg-ctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattacttaacctaaaaaattttatc 28612453  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  28612452 taaaaaaatgcatcgcaccaatttcattc 28612424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 41326372 - 41326496
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 366  Q
    ||||||||||||||||  |||||| ||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||   |||| |    
T  41326372 tttattaattttgttaggtctgcaacaatttaacttaatttttccccgctcatttgttttattaagtttgcaattatttaacctaataaatcttatctaa 41326471  T
Q  367 aaaaatgcatcgcaccaatttcatt 391  Q
    |||||||||||||||||||||||||    
T  41326472 aaaaatgcatcgcaccaatttcatt 41326496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 265 - 369
Target Start/End: Complemental strand, 44543821 - 44543717
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| || ||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||| |||    
T  44543821 ttatttattaattttgttacgtccgcaacaatttaacctaatttttccccgctcatttgctttatttggtttgcaattatttaacctaaaaaattctatc 44543722  T
Q  365 taaaa 369  Q
    |||||    
T  44543721 taaaa 44543717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 356
Target Start/End: Original strand, 627537 - 627628
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 356  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  627537 ttatttattaattttgttacgtttgcagcaatttaacctaattttttcccgctcatttactttattacatttgcaattatttaacctaacaa 627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 265 - 371
Target Start/End: Original strand, 12898023 - 12898129
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||| || |||| |||||||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  12898023 ttatttattaattttgttagatctgcagcaatttaacctgatatttttccgctcatttactttgttaggtttgcaattatttaatctaacaaattccatc 12898122  T
Q  365 taaaaaa 371  Q
    |||||||    
T  12898123 taaaaaa 12898129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 267 - 392
Target Start/End: Original strand, 29549960 - 29550086
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 365  Q
    |||||||||||||||||  ||||||  ||||||||||||||||||| || ||||||||||||||| |||||  ||||||||||||||||||||| || |     
T  29549960 atttattaattttgttaggtctgcactaatttaacctaattttttctcgttcatttgctttattaggtttgttattatttaacctaacaaattctattta 29550059  T
Q  366 aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||| |||||||||    
T  29550060 aaaaaatgcatcgcaccgatttcattc 29550086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 266 - 359
Target Start/End: Complemental strand, 5013301 - 5013208
Alignment:
Q  266 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||  |||||||||    
T  5013301 tatttattaattttgttacgtctgcagcaatttaacctaaatttttcccgctcatttgctttattaggtttacaattatttaatttaacaaatt 5013208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 265 - 369
Target Start/End: Complemental strand, 44544032 - 44543928
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| || ||| ||||||||| |||||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||||||||    
T  44544032 ttatttattaattttgttacgtccgcaacaatttaacataattttttcccactcatttgcattattaagtttgtaattatttaacctaataaattccatc 44543933  T
Q  365 taaaa 369  Q
    |||||    
T  44543932 taaaa 44543928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 3249688 - 3249561
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||| ||||| |||||||||||||||||| ||||| |||  || | |||||||||||||| || ||||    
T  3249688 ttatttattaattttgttaggtctgcagcaatttaagctaatattttcccgctcatttgctatattaggttaacagtaatttaacctaacaattttcatc 3249589  T
Q  365 taa-aaaatgcatcgcaccaatttcatt 391  Q
    ||| ||||| ||||||||||||||||||    
T  3249588 taaaaaaatacatcgcaccaatttcatt 3249561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 392
Target Start/End: Complemental strand, 5001442 - 5001352
Alignment:
Q  303 taattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcattc 392  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  5001442 taattttttctcgctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattc 5001352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 392
Target Start/End: Complemental strand, 5013112 - 5013022
Alignment:
Q  303 taattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcattc 392  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  5013112 taattttttctcgctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattc 5013022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 29549791 - 29549919
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||| ||||||||||  ||| || | ||||||| || |||||| ||||||||||||||||||| |||| |||||||||||||||| ||||| ||||    
T  29549791 ttatttatgaattttgttaggtctacaaccatttaacttattttttttccgctcatttgctttattaggtttacaattatttaacctaataaatttcatc 29549890  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||| ||||||||||||||||    
T  29549891 taaaaaaatgcaccgcaccaatttcattc 29549919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 627629 - 627706
Alignment:
Q  318 catttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 394  Q
    ||||| |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  627629 catttactttattacgtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcat 627706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 11657474 - 11657576
Alignment:
Q  287 ctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaat 385  Q
    |||||||| ||||||||||||||||| || |||||||||   ||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  11657474 ctgcagcattttaacctaattttttctcgttcatttgct---ttaggtttgcaattatttaa-ctaacaaatttcatctaaaaaaatgcatcgcaccaat 11657569  T
Q  386 ttcattc 392  Q
    |||||||    
T  11657570 ttcattc 11657576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 12896532 - 12896407
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat- 363  Q
    |||||||||||||||||||  ||| || ||||||||| |||| |||| ||||||||||| ||||||| |||||||||||||||| |||| |||||||||     
T  12896532 ttatttattaattttgttatgtctacaacaatttaacttaatctttttccgctcatttgttttattaggtttgcaattatttaatctaataaattccata 12896433  T
Q  364 --ctaaaaaatgcatcgcaccaattt 387  Q
        |||||||||||||||| |||||    
T  12896432 aaaaaaaaaatgcatcgcactaattt 12896407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 392
Target Start/End: Original strand, 6347935 - 6348020
Alignment:
Q  307 tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa-tgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||    
T  6347935 tttttcccgctcatttgctttatta-gtttacaattatttaacctaacaaatttcatctaaaaaattatatcgcaccaatttcattc 6348020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 20708899 - 20708964
Alignment:
Q  328 attatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattc 392  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  20708899 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattc 20708964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 19640327 - 19640414
Alignment:
Q  286 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaat 372  Q
    ||||||||||||||| ||||||||||   || ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  19640327 tctgcagcaatttaatctaatttttttttcgttcatttattttattgggtttgcaattatttaacctaataaattccatctaaaaaat 19640414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 19838920 - 19839007
Alignment:
Q  286 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaat 372  Q
    ||||||||||||||| ||||||||||   || ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  19838920 tctgcagcaatttaatctaatttttttttcgttcatttattttattgggtttgcaattatttaacctaataaattccatctaaaaaat 19839007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 392
Target Start/End: Complemental strand, 44543714 - 44543660
Alignment:
Q  339 aattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  44543714 aattatttaacctaacaaatttcatctaaaagaatgcatcacaccaatttcattc 44543660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 2132309 - 2132238
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 336  Q
    ||||||||||| |||||||  |||||| ||||||||||||||||||  | ||||||||||||| ||| ||||    
T  2132309 ttatttattaagtttgttaggtctgcaacaatttaacctaatttttctctgctcatttgcttttttaggttt 2132238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 966889 - 966929
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  966889 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 966929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 1750459 - 1750419
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  1750459 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 1750419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 11825709 - 11825749
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  11825709 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 11825749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 16804013 - 16803973
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  16804013 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 16803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 16843295 - 16843255
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  16843295 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 16843255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 18491750 - 18491710
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  18491750 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 18491710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 41282029 - 41282069
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  41282029 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 41282069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 43114602 - 43114562
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  43114602 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 43114562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 17930585 - 17930465
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||  |||||| ||| ||||||||||  || |||  | |  ||||  |||| |||||||   ||||||||||||||||||||||    
T  17930585 ttatttattaattttattaggtctgcaacaacttaacctaataattcccctttaaaatgctgaattaggtttgcagcaatttaacctaacaaattccatc 17930486  T
Q  365 taaaaaatgcatcgcaccaattt 387  Q
    |  |||||||| |||||||||||    
T  17930485 t--aaaatgcaacgcaccaattt 17930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 7070459 - 7070421
Alignment:
Q  224 tacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  7070459 tacaatgggatgtatgaataaagggtgttcatgtaacat 7070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 15256590 - 15256548
Alignment:
Q  343 atttaacctaacaaattccatctaaaaaatgcatcgcaccaattt 387  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  15256590 atttaacctaacaaattccatct--aaaatgcaacgcaccaattt 15256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 17370109 - 17370150
Alignment:
Q  296 tttaacctaattttttcccgctcatttgctttattatgtttg 337  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  17370109 tttaacctaattttctcccgctcatttgttttattaggtttg 17370150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 20641700 - 20641641
Alignment:
Q  265 ttatttattaattttgttacc---tctgcagcaatttaacctaattttttcccgctcatt 321  Q
    |||||||||||||||||||     |||||| ||| |||||||||||||||||||||||||    
T  20641700 ttatttattaattttgttattaggtctgcaacaagttaacctaattttttcccgctcatt 20641641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 4299475 - 4299515
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||| ||||||    
T  4299475 tgtacaatagggtgtatgattaaagggtgttcatataacat 4299515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 394
Target Start/End: Original strand, 11736228 - 11736256
Alignment:
Q  366 aaaaaatgcatcgcaccaatttcattcat 394  Q
    |||||||||||||||||||||||||||||    
T  11736228 aaaaaatgcatcgcaccaatttcattcat 11736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 12302308 - 12302348
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  12302308 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 12302348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 12415515 - 12415555
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  12415515 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 12415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 12427575 - 12427615
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  12427575 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 12427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 16096792 - 16096752
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||| ||||||||||| || |||||||||||||||||||||    
T  16096792 tgtataatggggtgtaggaataaagggtgttcatgtaacat 16096752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 34817831 - 34817871
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| ||||| ||| |||||||||||||||||||||    
T  34817831 tgtacaatgaggtgtgtgaataaagggtgttcatgtaacat 34817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 43490456 - 43490496
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  43490456 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 43490496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 1197878 - 1198005
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  1197878 ttatttattaattttgttaggtctgcagcaatttaacctaatcttttcccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatc 1197977  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||| |||||||||||    
T  1197978 taaaaaatgcatcgcatcaatttcattc 1198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 268 - 392
Target Start/End: Complemental strand, 27853773 - 27853648
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa 367  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27853773 tttattaattttgttatgtctgtagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaa 27853674  T
Q  368 -aaaatgcatcgcaccaatttcattc 392  Q
     |||||||||||||||||||||||||    
T  27853673 aaaaatgcatcgcaccaatttcattc 27853648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 23828233 - 23828127
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23828233 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23828134  T
Q  365 taaaaaa 371  Q
    |||||||    
T  23828133 taaaaaa 23828127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 263 - 392
Target Start/End: Complemental strand, 23838451 - 23838321
Alignment:
Q  263 ctttatttattaattttgttacctctgcagcaatttaacct-aattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 361  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |    
T  23838451 ctttatttattaattttgttaggtctgcagcaatttaaccttaattttttcccgctcatttgctttattagttttgcaattatttaacctaacaaattgc 23838352  T
Q  362 atctaaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||| ||||| ||||||||||||||    
T  23838351 atctaaaaaaagcatctcaccaatttcattc 23838321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 3459241 - 3459113
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  3459241 ttatttactaattttgttacgtctgcagcaatttaacataattttttcccgctcatttgctttattaggtttgcaattatttaatctaacaaatttcatc 3459142  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| ||||||||||||| |||||||||||    
T  3459141 taaaaaaatgcatcgcatcaatttcattc 3459113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 260 - 392
Target Start/End: Original strand, 23085855 - 23085989
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    |||| |||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  23085855 catcattatttattaattttgttaggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaataaatt 23085954  T
Q  360 ccatct--aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||  ||||||| |||||||||||||||||||    
T  23085955 ccatctaaaaaaaatacatcgcaccaatttcattc 23085989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 29580144 - 29580017
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| ||| ||||    
T  29580144 ttatttattaattttgttacgtatgcatcaatttaacctaattttttcccgctcatttgttttattaggtttgcaattatttaaactaacacatttcatc 29580045  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    |||||| |||||||||||||||||||||    
T  29580044 taaaaattgcatcgcaccaatttcattc 29580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 261 - 392
Target Start/End: Complemental strand, 23960909 - 23960778
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||    
T  23960909 atctttatttaataattttgttacgtctgcagcaatttaacctaattttttcca-ctcatttgctttattaggtttgtaattatttaacctaacaaattc 23960811  T
Q  361 catctaaaaaatg-catcgcaccaatttcattc 392  Q
    ||||||||||| | ||||||| |||||||||||    
T  23960810 catctaaaaaaagacatcgcatcaatttcattc 23960778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 391
Target Start/End: Original strand, 32062815 - 32062945
Alignment:
Q  265 ttatttattaattttgttacct--ctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 362  Q
    |||||||||||||||||||| |  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  32062815 ttatttattaattttgttacgttgctgcagcaatttaaactaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 32062914  T
Q  363 tct--aaaaaatgcatcgcaccaatttcatt 391  Q
    |||  ||||||||||| ||||||||||||||    
T  32062915 tctaaaaaaaatgcattgcaccaatttcatt 32062945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 37198404 - 37198276
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||  |||| ||||| |||||||||||||||||||||    
T  37198404 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattcggttttcaattgtttaacctaacaaattccatc 37198305  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| ||||||||| |||||||||||||||    
T  37198304 taaaaaaatgcattgcaccaatttcattc 37198276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 33198833 - 33198960
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||| ||||| |||  || | ||||||||||||||||||||||    
T  33198833 ttatttattaattttgttaggtctgcagcaatttaacctaatatttttccgctcatttgctgtattaggttaacagtgatttaacctaacaaattccatc 33198932  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||||||||||    
T  33198933 taaaaaatgcatcgcaccaatttcattc 33198960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 35617681 - 35617811
Alignment:
Q  265 ttatttattaattttgttacctctgca-gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||    
T  35617681 ttatttattaattttgttacgtctgcaagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattctat 35617780  T
Q  364 ct--aaaaaatgcatcgcaccaatttcattc 392  Q
    ||  |||||||||||||||| ||||||||||    
T  35617781 ctaaaaaaaatgcatcgcactaatttcattc 35617811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 37410178 - 37410051
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  37410178 ttatttattaattttattacgtttgcagcaatttaacttaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 37410079  T
Q  365 taaaaa-atgcatcgcaccaatttcatt 391  Q
    |||||| ||||||||||| |||||||||    
T  37410078 taaaaagatgcatcgcacaaatttcatt 37410051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 267 - 392
Target Start/End: Complemental strand, 39922192 - 39922066
Alignment:
Q  267 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 366  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  39922192 atttattaactttgttacgtctgcagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattccatcta 39922093  T
Q  367 a-aaaatgcatcgcaccaatttcattc 392  Q
    | |||||| || |||||||||| ||||    
T  39922092 aaaaaatgtattgcaccaattttattc 39922066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 260 - 392
Target Start/End: Complemental strand, 40399605 - 40399472
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    |||| |||| |||||||||| |||  | || ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  40399605 catccttatgtattaatttttttatgtatgtagcaatttaacctaattttttcccgctcatttgttttattaggtttgtaattatttaacctaacaaatt 40399506  T
Q  360 ccatctaa-aaaatgcatcgcaccaatttcattc 392  Q
    |||||||| |||||||||||||||||||||||||    
T  40399505 ccatctaaaaaaatgcatcgcaccaatttcattc 40399472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 293 - 392
Target Start/End: Original strand, 38111372 - 38111472
Alignment:
Q  293 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 391  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  38111372 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacccaacaaattccatctgaaaaaatgcatcgcaccaatttcatt 38111471  T
Q  392 c 392  Q
    |    
T  38111472 c 38111472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 44429050 - 44429177
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||| || ||| |||||||||| ||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  44429050 ttatttattaattttgttaggtctccaacaacttaacctaatattttccctctcatttgctttattaggtaagcaataatttaacctaacaaattccatc 44429149  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||||||||||    
T  44429150 taaaaaatgcatcgcaccaatttcattc 44429177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 23831051 - 23830945
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  23831051 ttatttattaattttgttaggtgtgcagaaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattgcatc 23830952  T
Q  365 taaaaaa 371  Q
    |||||||    
T  23830951 taaaaaa 23830945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 23960687 - 23960560
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| | ||||||| ||||||||| |||| |||||||||||||||||||||| ||||    
T  23960687 ttatttattaattttgttacgtctgcaacaatttaacttaatttttttctgctcatt-gctttattaggtttacaattatttaacctaacaaatttcatc 23960589  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  23960588 taaaaaaatgcatcgcaccaatttcattc 23960560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 392
Target Start/End: Original strand, 34947504 - 34947603
Alignment:
Q  293 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  34947504 caatttaacctaatttttttccgctcatttgctttattaggtttgaaattatttaacctaacaaatttcatctaaaaaatgcatcgcacaaatttcattc 34947603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 30439151 - 30439021
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc---ccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 361  Q
    |||||||||||||||||||  |||||| |||||||| ||||||||||    | | ||||||||||||||| ||||||||||||||||||||||||||| |    
T  30439151 ttatttattaattttgttaggtctgcaacaatttaatctaattttttttttctgttcatttgctttattaggtttgcaattatttaacctaacaaatttc 30439052  T
Q  362 atctaaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||||||| ||||    
T  30439051 atctaaaaaatgcatcgcaccaattttattc 30439021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 37198018 - 37197884
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat--------gtttgcaattatttaacctaacaa 356  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||         ||||||||||||||||||||||||    
T  37198018 ttatttattaattttgttacgtctgcagcaatttaacctaattttt--ccgctcattttctttattaatttattaggtttgcaattatttaacctaacaa 37197921  T
Q  357 attccatctaa-aaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||| |||||||||||||||||||||||||    
T  37197920 attccatctaaaaaaatgcatcgcaccaatttcattc 37197884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 37198220 - 37198113
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||| ||    
T  37198220 ttattttttaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattctat 37198121  T
Q  364 ctaaaaaa 371  Q
    ||||||||    
T  37198120 ctaaaaaa 37198113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 265 - 387
Target Start/End: Complemental strand, 37197783 - 37197662
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||  | |  ||||||||||||||||||||| ||||    
T  37197783 ttatttattaattttgttacctctgcagcaatttaacctaa--ttttcctgctcatttgctttattaaatataaaattatttaacctaacaaatttcatc 37197686  T
Q  365 t-aaaaaatgcatcgcaccaattt 387  Q
    | ||||||||||| ||||||||||    
T  37197685 taaaaaaatgcatggcaccaattt 37197662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 13797442 - 13797570
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | |||| ||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||     
T  13797442 ttatttattaattttgttaggtttgcatcaacttaacctagttttttcctgctcatttgctttattaggtttgcaattatttaacttaacaaattcaatt 13797541  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||| || |||||||||||||||    
T  13797542 taaaaaaatgtatggcaccaatttcattc 13797570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 2084876 - 2085005
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | |||||||| |||| ||||| ||||||| |||||||||| ||||| ||| | | | ||||||||||||||||||||||    
T  2084876 ttatttattaattttgttaggtttgcagcaacttaatctaatattttccctctcatttgctgtattaggttagtagtaatttaacctaacaaattccatc 2084975  T
Q  365 ta--aaaaatgcatcgcaccaatttcattc 392  Q
    ||  ||||||||||||||||||||||||||    
T  2084976 taagaaaaatgcatcgcaccaatttcattc 2085005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 261 - 371
Target Start/End: Original strand, 37426112 - 37426222
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||||||| | |||||||| |||  |||||||||| | |||||||| |||||||| |||||||||| |||||| ||||||||||    
T  37426112 atctttatttattaattttgttacgtttgcagcaagttagtctaatttttttcagctcatttactttattaggtttgcaattgtttaacataacaaattc 37426211  T
Q  361 catctaaaaaa 371  Q
    |||||||||||    
T  37426212 catctaaaaaa 37426222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 44433629 - 44433757
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||| ||||||||||  |||||||||| || || |||| ||||||| | |||||||| ||||||||| ||| | ||||||||||||||||| ||||    
T  44433629 ttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgctgtattatgttagcagtaatttaacctaacaaatttcatc 44433728  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  44433729 taaaaaaatgcatcgcaccaatttcattc 44433757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 44429894 - 44430024
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||| ||||||||||  |||||||||| || || |||| ||||||| | |||||| | ||||||||| ||| | ||||||||||||||||| ||||    
T  44429894 ttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgttgtattatgttagcagtaatttaacctaacaaatttcatc 44429993  T
Q  365 t-aaaaaatgcatcgcaccaatttcattcat 394  Q
    | |||||||||||||||||||||||||||||    
T  44429994 taaaaaaatgcatcgcaccaatttcattcat 44430024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 273 - 391
Target Start/End: Original strand, 42045644 - 42045764
Alignment:
Q  273 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttatta--tgtttgcaattatttaacctaacaaattccatct-aaaa 369  Q
    |||||||||||| ||||||||||||||||||||||||||   |||||||| |||| |||   ||||||||||||||||||||||||||| ||||| ||||    
T  42045644 taattttgttacgtctgcagcaatttaacctaatttttt-ttgctcatttactttgttaagagtttgcaattatttaacctaacaaatttcatctaaaaa 42045742  T
Q  370 aatgcatcgcaccaatttcatt 391  Q
    |||||||| || ||||||||||    
T  42045743 aatgcatcacatcaatttcatt 42045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 273 - 358
Target Start/End: Complemental strand, 18308343 - 18308258
Alignment:
Q  273 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 358  Q
    |||||||||||| ||||||  || |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  18308343 taattttgttacatctgcaataacttaacctaattttttcccactcatttgctttattaggttcgcaattatttaacctaacaaat 18308258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 43419138 - 43419032
Alignment:
Q  259 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 358  Q
    ||||| |||||||||||||||||||| |||||| ||| |||| |||| ||||||||||||||||||||||||| ||||   | |||||||||||||||||    
T  43419138 acatccttatttattaattttgttacatctgcatcaacttaatctaa-tttttcccgctcatttgctttattaggttt---actatttaacctaacaaat 43419043  T
Q  359 tccatctaaaa 369  Q
    | |||||||||    
T  43419042 ttcatctaaaa 43419032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 23838242 - 23838176
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttatta 331  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  23838242 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttatta 23838176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 33198603 - 33198729
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  || |||| ||||||||||||||||||    |||||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  33198603 ttatttattaattttgttaggtcagcagtaatttaacctaatttttt--tactcatttgctgtattaggttagcactaatttaacctaacaaatttcatc 33198700  T
Q  365 taaaa-aatgcatcgcaccaatttcattc 392  Q
    ||||| |||||||||| | ||||||||||    
T  33198701 taaaacaatgcatcgcgcaaatttcattc 33198729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 604781 - 604652
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||||||| |||| | ||| ||| ||  || ||||||||||||| ||  ||| | ||||||||||||||||| ||||    
T  604781 ttatttattaattttgttaggtctgcagcaacttaatcgaatatttccctcct-atttgctttattaggtaagcagtaatttaacctaacaaatttcatc 604683  T
Q  365 taa-aaaatgcatcgcaccaatttcattcat 394  Q
    ||| ||||||||||||| |||||||||||||    
T  604682 taaaaaaatgcatcgcaacaatttcattcat 604652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 44430067 - 44430196
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 363  Q
    |||||||||||||||||||  |||||| ||| ||||| |||| ||||||| | |||||||||||||| ||  ||| | |||||||| ||| |||||||||    
T  44430067 ttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacccaacaaaattccat 44430166  T
Q  364 c-taaaaaatgcatcgcaccaatttcattc 392  Q
    | | |||||||| |||||||||||||||||    
T  44430167 ctttaaaaatgcttcgcaccaatttcattc 44430196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 44430418 - 44430547
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 363  Q
    |||||||||||||||||||  |||||||||| |||||||| | ||||||| |||||||||||||| | ||  ||| | |||||||| ||| ||||| |||    
T  44430418 ttatttattaattttgttagatctgcagcaacttaacctactattttccctctcatttgctttatcaggtaagcagtaatttaacccaacaaaatttcat 44430517  T
Q  364 c-taaaaaatgcatcgcaccaatttcattc 392  Q
    | | |||||||| |||||||||||||||||    
T  44430518 cttgaaaaatgcttcgcaccaatttcattc 44430547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 44433802 - 44433931
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 363  Q
    |||||||||||||||||||  |||||| ||| ||||| |||| ||||||| | |||||||||||||| ||  ||| | |||||||| ||| |||||||||    
T  44433802 ttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacccaacaaaattccat 44433901  T
Q  364 c-taaaaaatgcatcgcaccaatttcattc 392  Q
    | | |||||||| |||||||||||||||||    
T  44433902 ctttaaaaatgcttcgcaccaatttcattc 44433931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 44014524 - 44014572
Alignment:
Q  344 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44014524 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 44014572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 387
Target Start/End: Complemental strand, 604606 - 604485
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctc-atttgctttattatgtttgcaattatttaacctaacaaattccatcta 366  Q
    ||||||||||||||||  |||| ||||| |||||||||| ||||||| ||| ||||||| ||||| ||| ||| | ||||||| ||||||||| ||||||    
T  604606 tttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgctgtattaggttagcagtaatttaacataacaaatttcatcta 604507  T
Q  367 aaa-aatgcatcgcaccaattt 387  Q
    ||| || ||||| |||||||||    
T  604506 aaacaaagcatcacaccaattt 604485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 1276574 - 1276501
Alignment:
Q  320 tttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 392  Q
    |||||||||||| |||||||||||||||||||||||||||  |||||||| ||| ||| |||||||||||||||    
T  1276574 tttgctttattaggtttgcaattatttaacctaacaaattgtatctaaaataattcattgcaccaatttcattc 1276501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 392
Target Start/End: Original strand, 3990184 - 3990273
Alignment:
Q  304 aattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||  ||  ||| ||||||||||||||||||||| ||||| ||||| |||||||| || |||||||||||||||    
T  3990184 aattttttcccgctcatttatttgtttaggtttgcaattatttaacctaataaattacatctaaaaaaatgaattgcaccaatttcattc 3990273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 44429224 - 44429353
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 363  Q
    |||||||||||||||||||  |||||| ||| |||||||||| |||| || |||||||||||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44429224 ttatttattaattttgttaggtctgcaacaacttaacctaatatttttcctctcatttgctttattaggtaagcagtaatttaacccaacaaaatttcat 44429323  T
Q  364 c-taaaaaatgcatcgcaccaatttcattc 392  Q
    | | |||||||| ||||| |||||||||||    
T  44429324 cttgaaaaatgcttcgcatcaatttcattc 44429353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 44433976 - 44434105
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 363  Q
    |||||||||||||||||||  |||||| ||| ||||||||||  |||||| | |||||||||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44433976 ttatttattaattttgttaggtctgcaacaacttaacctaatactttccctcccatttgctttattaggtaagcagtaatttaacccaacaaaatttcat 44434075  T
Q  364 c-taaaaaatgcatcgcaccaatttcattc 392  Q
    | | |||||||| |||||||||||||||||    
T  44434076 cttgaaaaatgcttcgcaccaatttcattc 44434105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 39922016 - 39921960
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatt 321  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  39922016 ttatttattaattttgttacgtctgcaacaatttaacctaattttttcctgctcatt 39921960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 37197834 - 37197788
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 311  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  37197834 ttatttattaattttgttacgtctgcagcaatttaacctaatttttt 37197788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 44430241 - 44430370
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 363  Q
    |||||||||||||||||||  |||||| ||| |||||||||| |||| || | ||||| |||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44430241 ttatttattaattttgttaggtctgcaacaacttaacctaatatttttcctcccatttactttattaggtaagcagtaatttaacccaacaaaatttcat 44430340  T
Q  364 c-taaaaaatgcatcgcaccaatttcattc 392  Q
    | | |||||||| |||||||||||||||||    
T  44430341 cttgaaaaatgcttcgcaccaatttcattc 44430370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 34345139 - 34345193
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttccc 314  Q
    |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  34345139 catccttatttattaattttattaggtctgcagcaatttaacctaattttttccc 34345193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 39922272 - 39922226
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 311  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  39922272 ttatttattaattttgttacgtcttcagcaatttaacctaatttttt 39922226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 44434153 - 44434211
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttg 323  Q
    |||||||||||||||||||  |||||||||| |||||||||| ||||||| ||||||||    
T  44434153 ttatttattaattttgttagatctgcagcaacttaacctaatattttccctctcatttg 44434211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 38111190 - 38111249
Alignment:
Q  334 tttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||| |||||||||||||| ||||||| |||||||| ||||| ||||||||||||    
T  38111190 tttgcaattgtttaacctaacaaaatccatctaaaaaaatgtatcgcgccaatttcattc 38111249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 604875 - 604825
Alignment:
Q  343 atttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  604875 atttaacctaacaaatttcatctaaaaaaatgcatcgcacaaatttcattc 604825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 30912617 - 30912657
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  30912617 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 30912657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 35181561 - 35181521
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35181561 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 35181521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 42699302 - 42699262
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  42699302 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 42699262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 394
Target Start/End: Complemental strand, 605020 - 604969
Alignment:
Q  344 tttaacctaacaaattccatctaaaaaa-tgcatcgcaccaatttcattcat 394  Q
    |||||||||| |||||| |||||||||| || ||||||||||||||||||||    
T  605020 tttaacctaataaattcaatctaaaaaaatgtatcgcaccaatttcattcat 604969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 354
Target Start/End: Complemental strand, 604434 - 604344
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctc-atttgctttattatgtttgcaattatttaacctaac 354  Q
    |||||||||||||||||||  |||| ||||| |||||||||| ||||||| ||| ||||| | ||||| |||  || | ||||||||||||    
T  604434 ttatttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgttgtattaggttaacagtaatttaacctaac 604344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 23831193 - 23831131
Alignment:
Q  333 gtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattcat 394  Q
    ||||||||||| |||||||| |||||| ||||||||  |||| ||| ||||||||||||||||    
T  23831193 gtttgcaattacttaacctatcaaattgcatctaaattaatgtatctcaccaatttcattcat 23831131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 11582811 - 11582771
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  11582811 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 11582771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 20148805 - 20148765
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  20148805 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 20148765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 29705407 - 29705367
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  29705407 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 29705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 33630048 - 33630088
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| ||||||||| |||||||||||| ||||||||    
T  33630048 tgtacaatgaggtgtatgattaaagggtgttcgtgtaacat 33630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 34304833 - 34304793
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  34304833 tgtacaatagggtgtatgattaaaggatgttcatgtaacat 34304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 36743538 - 36743578
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  36743538 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 36743578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 42295240 - 42295200
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  42295240 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 42295200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 264 - 394
Target Start/End: Complemental strand, 12442259 - 12442128
Alignment:
Q  264 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||    
T  12442259 tttatttattaattatgttaggtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaattatttaacctaacaaattacat 12442160  T
Q  364 cta-aaaaatgcatcgcaccaatttcattcat 394  Q
    ||| ||||||||||||||||||||||||||||    
T  12442159 ctacaaaaatgcatcgcaccaatttcattcat 12442128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 11313979 - 11314108
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  11313979 ttatttattaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaaaaaattccat 11314078  T
Q  364 ct-aaaaaatgcatcgcaccaatttcattc 392  Q
    || |||||||||||||||||||||||||||    
T  11314079 ctaaaaaaatgcatcgcaccaatttcattc 11314108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 35159704 - 35159831
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  35159704 ttatttattaattttgttacgtctgcagcaatttaaccta-ttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattttatc 35159802  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  35159803 taaaaaaatgcatcgcaccaatttcattc 35159831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 260 - 392
Target Start/End: Original strand, 7127554 - 7127687
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  7127554 catccttatttattaattttgttacgtttgcagcaatttaacctaattttttcctgctcatttgcttgattaggtttgcaattatttaaactaacaaatt 7127653  T
Q  360 ccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||| |||||||| ||||||||||||||||||    
T  7127654 ccatctaaaaaaatgtatcgcaccaatttcattc 7127687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 261 - 394
Target Start/End: Complemental strand, 7673329 - 7673193
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 359  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  7673329 atctttatttattaattttgttacgtctgcagcaatttaacctaatttttttcccgttcatttgttttattaggtttgcaattatttaacctaacaaatt 7673230  T
Q  360 ccatctaa--aaaatgcatcgcaccaatttcattcat 394  Q
     |||||||  ||||||||||||| |||||||||||||    
T  7673229 tcatctaaaaaaaatgcatcgcatcaatttcattcat 7673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 16528600 - 16528728
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||| || |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  16528600 ttatttattaattttgttacgtctacaacaatttaacctaacattttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattctatc 16528699  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||||||||||||||||||    
T  16528700 taaaaaaatgcatcgcaccaatttcattc 16528728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 26523265 - 26523137
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  26523265 ttatttattaattttgttatgtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttgatctaacaaattccatc 26523166  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  26523165 taaaaaaatgcatcgcaccaatttcattc 26523137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 43395058 - 43394931
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  43395058 ttatttattaattt-gttacgtttgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 43394960  T
Q  365 taa-aaaatgcatcgcaccaatttcattc 392  Q
    ||| |||||||||||||||||||||||||    
T  43394959 taaaaaaatgcatcgcaccaatttcattc 43394931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 257 - 394
Target Start/End: Original strand, 19121899 - 19122037
Alignment:
Q  257 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 356  Q
    ||||||| |||||||||||||||||||  |||||| ||||||||||||||||||| |  |||||||||||||||| |||||||||| |||||||||||||    
T  19121899 taacatccttatttattaattttgttaggtctgcatcaatttaacctaatttttttcaactcatttgctttattaggtttgcaattgtttaacctaacaa 19121998  T
Q  357 attccatct-aaaaaatgcatcgcaccaatttcattcat 394  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  19121999 attctatctaaaaaaatgcatcgcaccaatttcattcat 19122037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 270 - 392
Target Start/End: Original strand, 11313807 - 11313930
Alignment:
Q  270 tattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaa 368  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| |||    
T  11313807 tattaattttgttacgtctgcaacaatttaacctaattttttcccgcacattttctttattaggtttgcaattatttaacctaacaaattccatctaaaa 11313906  T
Q  369 aaatgcatcgcaccaatttcattc 392  Q
    ||||| ||| ||||||||||||||    
T  11313907 aaatgtatcccaccaatttcattc 11313930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 24351577 - 24351450
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  24351577 ttatttattaatttttttaggtctgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatc 24351478  T
Q  365 taa-aaaatgcatcgcaccaatttcatt 391  Q
    ||| ||||||||||||||||||||||||    
T  24351477 taaaaaaatgcatcgcaccaatttcatt 24351450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 31487189 - 31487062
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  31487189 ttatttattaattttgttaggtctgcagtaatttaacctaatattttcccgctcatttgctgtattaggttagcagtaatttaacctaacaaatttcatc 31487090  T
Q  365 taaaaaatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||||||||||    
T  31487089 taaaaaatgcatcgcaccaatttcattc 31487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 265 - 371
Target Start/End: Original strand, 16529135 - 16529241
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  16529135 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcgcgctcatttgctttattagatttgcaattatttaacgtaacaaattccatc 16529234  T
Q  365 taaaaaa 371  Q
    |||||||    
T  16529235 taaaaaa 16529241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 277 - 392
Target Start/End: Original strand, 16528793 - 16528909
Alignment:
Q  277 tttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgca 375  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||| ||||||| ||    
T  16528793 tttgttacgtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaaatatttaacctaacaacttccatctaaaaaaattca 16528892  T
Q  376 tcgcaccaatttcattc 392  Q
    |||||||||||||||||    
T  16528893 tcgcaccaatttcattc 16528909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 16528959 - 16529087
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  || |||||||||| |||||| |||||||||||||||||||||||||||  |||    
T  16528959 ttatttattaattttgttacgtctgcagcaatttaacctaatttt--cctgctcatttgccttattaggtttgcaattatttaacctaacaaatttaatc 16529056  T
Q  365 t-aaaaaatgcatcgcaccaatttcattcat 394  Q
    | ||||||| |||||||||||||||||||||    
T  16529057 taaaaaaattcatcgcaccaatttcattcat 16529087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 261 - 391
Target Start/End: Original strand, 35159415 - 35159545
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||| |||| || |||||||||||| |||||||||||||||||||||| |||||    
T  35159415 atctttatttattaattttgttacgt-tgcaacaatttaacctaattttt-cccgttcttttgctttattaggtttgcaattatttaacctaaccaattc 35159512  T
Q  361 catct--aaaaaatgcatcgcaccaatttcatt 391  Q
    |||||  ||||||||||||||||||||||||||    
T  35159513 catctaaaaaaaatgcatcgcaccaatttcatt 35159545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 11313640 - 11313770
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    ||||||||||||||| |||| ||| || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||    
T  11313640 ttatttattaatttttttacgtctacaacaatttaacctaattttttcccgctcattttctttattaggtttgcaattatttaacctaacaaattctatc 11313739  T
Q  365 t---aaaaaatgcatcgcaccaatttcattc 392  Q
    |   ||||||||||| ||| |||||||||||    
T  11313740 taaaaaaaaatgcattgcatcaatttcattc 11313770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 257 - 392
Target Start/End: Original strand, 19122235 - 19122371
Alignment:
Q  257 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 356  Q
    ||||||| |||||||||||||||||||  | |||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||    
T  19122235 taacatccttatttattaattttgttaggtttgcatcaatttaacctaatttttttccactcatttgctttattaggtttgcaattgtttaacctaacaa 19122334  T
Q  357 attccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    |||| |||| |||||||||||| || |||||||||||    
T  19122335 attctatctaaaaaaatgcatcacatcaatttcattc 19122371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 265 - 391
Target Start/End: Complemental strand, 41093175 - 41093047
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc--ca 362  Q
    |||||||||||||||||||  |||||| |||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||||||  |     
T  41093175 ttatttattaattttgttaggtctgcatcaatttaacctaatttattcctgctgatttgctttattaggtttgcaattatttaacctaacaaattcttcc 41093076  T
Q  363 tctaaaaaatgcatcgcaccaatttcatt 391  Q
    |  ||||||||||||||||||||||||||    
T  41093075 taaaaaaaatgcatcgcaccaatttcatt 41093047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 288 - 391
Target Start/End: Complemental strand, 24351001 - 24350897
Alignment:
Q  288 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatt 386  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  24351001 tgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatt 24350902  T
Q  387 tcatt 391  Q
    |||||    
T  24350901 tcatt 24350897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 265 - 371
Target Start/End: Complemental strand, 9488175 - 9488069
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||| | |||||||||||||  |||||||||||||||||||||||||| ||||    
T  9488175 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgtttatttgctttattagatttgcaattatttaacctaacaaatttcatc 9488076  T
Q  365 taaaaaa 371  Q
    |||||||    
T  9488075 taaaaaa 9488069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 10409525 - 10409655
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||| ||| | ||  |||||||||||||||||||||||||| |||     
T  10409525 ttatttattaattttgttacgtctccagtaatttaatctaattttttcccgctcattttcttcactagatttgcaattatttaacctaacaaatttcatt 10409624  T
Q  365 t-aaaaaatgcatcgcaccaatttcattcat 394  Q
    | ||||||||||||||| |||||||||||||    
T  10409625 taaaaaaatgcatcgcatcaatttcattcat 10409655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 263 - 392
Target Start/End: Complemental strand, 31486943 - 31486813
Alignment:
Q  263 ctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 362  Q
    ||||||||||||||||| |||  |||||| |||||||||||||| |||||||| ||||||||| ||||| |||  || | ||||||||||||||||||||    
T  31486943 ctttatttattaatttttttaggtctgcaacaatttaacctaatattttcccgttcatttgctgtattaggttaacagtaatttaacctaacaaattcca 31486844  T
Q  363 tctaa-aaaatgcatcgcaccaatttcattc 392  Q
    ||||| |||||||||||||||||||||||||    
T  31486843 tctaaaaaaatgcatcgcaccaatttcattc 31486813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 41092995 - 41092869
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  |||||| |||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  41092995 ttatttattaattttgttaggtctgcatcaatttaacctaatttattcc-gctcttttgctttattaggtttgcaattatttaacctaacaaatt-catc 41092898  T
Q  365 t-aaaaaatgcatcgcaccaatttcattc 392  Q
    | |||||||||||| | ||||||||||||    
T  41092897 taaaaaaatgcatcaccccaatttcattc 41092869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 14166289 - 14166159
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||   |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  14166289 ttatttattaattttgttaggtctgcagtaatttaacttaatttttttttcagtcatttgctttattatgtttgcaattatttaacctaacaaattccat 14166190  T
Q  364 ct--aaaaaatgcatcgcaccaatttcattc 392  Q
     |  ||||||||||||||| |||||||||||    
T  14166189 ttaaaaaaaatgcatcgcatcaatttcattc 14166159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 371
Target Start/End: Original strand, 16526197 - 16526304
Alignment:
Q  265 ttatttattaa-ttttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16526197 ttatttattaaattttgttacgtctgcatcaatttaacctaattttttttcactcatttgctttattaggtttgcaattatttaacctaacaaattccat 16526296  T
Q  364 ctaaaaaa 371  Q
     |||||||    
T  16526297 ttaaaaaa 16526304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 265 - 392
Target Start/End: Original strand, 23138032 - 23138161
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||| |||||||    
T  23138032 ttatttattaatttcgttaggtctgcagcattttaacctaattttttcc-gctcatttgctttattaggtttgcaattatataacgtaacaagttccatc 23138130  T
Q  365 t-aaaaaatgcatcg--caccaatttcattc 392  Q
    | |||||||||||||  ||||||||||||||    
T  23138131 taaaaaaatgcatcgcacaccaatttcattc 23138161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 265 - 394
Target Start/End: Complemental strand, 13105284 - 13105150
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta----tttaacctaacaaattc 360  Q
    |||||||||||||||||    ||||||||| |||||||||||||||| ||||||||| | ||||||| |||||||||||    ||||||||||||||||     
T  13105284 ttatttattaattttgtatggtctgcagcagtttaacctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaattt 13105185  T
Q  361 catct-aaaaaatgcatcgcaccaatttcattcat 394  Q
    ||||| |||||||||||||||||||||||||||||    
T  13105184 catctaaaaaaatgcatcgcaccaatttcattcat 13105150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 265 - 358
Target Start/End: Complemental strand, 26523361 - 26523268
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 358  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  26523361 ttatttattaattttgttatgtctgcatcaatttaacctaattttttcccgcttatttgctttattaggtttgcaattatttgacctaacaaat 26523268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 13035309 - 13035177
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta----tttaacctaacaaattc 360  Q
    |||||||||||||||||    ||||||||||||||| |||||||||| ||||||||| | ||||||| |||||||||||    ||||||||||||||||     
T  13035309 ttatttattaattttgtatggtctgcagcaatttaatctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaattt 13035210  T
Q  361 catct-aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||| |||||||||||||||||||||||||||    
T  13035209 catctaaaaaaatgcatcgcaccaatttcattc 13035177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 43395207 - 43395106
Alignment:
Q  294 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaa---atgcatcgcaccaatttcat 390  Q
    |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||   ||||||||||||||||||||    
T  43395207 aatttaacttgattttttcccgctcatttgctttattaggtttccaattatttaacctaacaaattacatgtaaaaaaatatgcatcgcaccaatttcat 43395108  T
Q  391 tc 392  Q
    ||    
T  43395107 tc 43395106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 16305348 - 16305476
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  | || |  ||||||| ||||||||  |||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  16305348 ttatttattaattttgttaggtttgtaataatttaaactaatttt--cccgctcatttgctttattaggtttgcaattatttaatctaataaattccatc 16305445  T
Q  365 t-aaaaaatgcatcgcaccaatttcattcat 394  Q
    | ||||||||||  ||| |||||||||||||    
T  16305446 taaaaaaatgcacagcatcaatttcattcat 16305476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 24326546 - 24326609
Alignment:
Q  286 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24326546 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 24350795 - 24350732
Alignment:
Q  286 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24350795 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 24351349 - 24351286
Alignment:
Q  286 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 349  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24351349 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24351286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 38004744 - 38004643
Alignment:
Q  292 gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 391  Q
    |||||||||| ||||||||| | | |||||||||||| || ||||| |||||||||| |||| ||||| |||||||||||||||||||| ||||||||||    
T  38004744 gcaatttaacttaatttttttc-gttcatttgctttaataggtttgtaattatttaatctaataaatttcatctaaaaaatgcatcgcatcaatttcatt 38004646  T
Q  392 cat 394  Q
    |||    
T  38004645 cat 38004643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 392
Target Start/End: Complemental strand, 26523542 - 26523413
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc---gctcatttgctttattatgtttgcaattatttaacctaacaaattcc 361  Q
    |||||||||||||||||||  | |||| || |||||| |||||||||  |   ||||||||||||||||||  ||||||||||||||| ||||||||| |    
T  26523542 ttatttattaattttgttaggtgtgcaccattttaacttaattttttttctttgctcatttgctttattat--ttgcaattatttaacataacaaatttc 26523445  T
Q  362 atctaa-aaaatgcatcgcaccaatttcattc 392  Q
    |||||| |||||||||| || |||||||||||    
T  26523444 atctaaaaaaatgcatcacatcaatttcattc 26523413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 7673145 - 7673100
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttt 310  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  7673145 ttatttattaattttgttacgtctgcagcaatttaacctaattttt 7673100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 312
Target Start/End: Original strand, 38109886 - 38109933
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 312  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  38109886 ttatttattaattttgttacgtctgcagcaatttaacctatttttttc 38109933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 394
Target Start/End: Original strand, 38109946 - 38109997
Alignment:
Q  344 tttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattcat 394  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  38109946 tttaatctaacaaattccatctaaaaaaatgcatcgcaccaatttcattcat 38109997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 22431585 - 22431634
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 314  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  22431585 ttatttattaattttgttaagtctgcagcaacttaacctaattttttccc 22431634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 33855098 - 33855138
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  33855098 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 33855138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 38268880 - 38268924
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaatttt 309  Q
    |||||||||||||||||||  |||||| |||||||||||||||||    
T  38268880 ttatttattaattttgttaggtctgcaacaatttaacctaatttt 38268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 392
Target Start/End: Complemental strand, 24271164 - 24271122
Alignment:
Q  351 taacaaattccatctaaaaaa-tgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  24271164 taacaaattccatctaaaaaaatgcatcgcacccatttcattc 24271122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 392
Target Start/End: Original strand, 24325983 - 24326025
Alignment:
Q  351 taacaaattccatctaaaa-aatgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  24325983 taacaaattccatctaaaaaaatgcatcgcacccatttcattc 24326025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 392
Target Start/End: Complemental strand, 24347786 - 24347744
Alignment:
Q  351 taacaaattccatctaaaaaa-tgcatcgcaccaatttcattc 392  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  24347786 taacaaattccatctaaaaaaatgcatcgcacccatttcattc 24347744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 2614704 - 2614744
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  2614704 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 2614744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 7617178 - 7617138
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  7617178 tgtataatggagtgtatgaataaagggtgttcatgtaacat 7617138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 394
Target Start/End: Complemental strand, 14165974 - 14165946
Alignment:
Q  366 aaaaaatgcatcgcaccaatttcattcat 394  Q
    |||||||||||||||||||||||||||||    
T  14165974 aaaaaatgcatcgcaccaatttcattcat 14165946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 18034027 - 18033987
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  18034027 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 18033987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 22512350 - 22512310
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  22512350 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 22512310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 25915042 - 25915082
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  25915042 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 25915082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 32473449 - 32473489
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  32473449 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 32473489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 41334718 - 41334758
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||| |||| ||||||||| |||||||||||||||||||||    
T  41334718 tgtataatgaggtgtatgaataaagggtgttcatgtaacat 41334758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 388
Target Start/End: Complemental strand, 163908 - 163784
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  163908 ttatttattaattttgttaggtctgcagcaatttaacctactttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattccatc 163809  T
Q  365 t-aaaaaatgcatcgcaccaatttc 388  Q
    | |||||||||||||||||||||||    
T  163808 tgaaaaaatgcatcgcaccaatttc 163784  T

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Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 163270 - 163228
Alignment:
Q  268 tttattaattttgttacctctgcagcaatttaacctaattttt 310  Q
    ||||||||||||||||  |||||||||| ||||||||||||||    
T  163270 tttattaattttgttaagtctgcagcaacttaacctaattttt 163228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 1640 - 1526
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  1640 ttatttattaattttgttacgtctgcagcaatttaatctaaattttttcccactcatttgctttattaagtttgcaattatttaacctaataaattccat 1541  T
Q  364 ctaaaaaatgcatcg 378  Q
    |||||||||||||||    
T  1540 ctaaaaaatgcatcg 1526  T

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Target: scaffold0013 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 261 - 392
Target Start/End: Original strand, 102701 - 102831
Alignment:
Q  261 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 360  Q
    |||||||||||||||||||||||  | ||||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  102701 atctttatttattaattttgttagatatgcaataatt--acctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaattc 102798  T
Q  361 catct-aaaaaatgcatcgcaccaatttcattc 392  Q
    ||||| ||||||||||||||| |||||||||||    
T  102799 catctaaaaaaatgcatcgcatcaatttcattc 102831  T

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Target: scaffold0240 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 265 - 394
Target Start/End: Original strand, 13092 - 13224
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 364  Q
    |||||||||||||| |||   |||||| ||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  13092 ttatttattaatttcgtttggtctgcaacaatttaacctaatttttttccgctcatttggtttattaggtttgccattatttaacctaacaaattccatc 13191  T
Q  365 taaa---aaatgcatcgcaccaatttcattcat 394  Q
    ||||   ||||||||||||||||||||||||||    
T  13192 taaaaacaaatgcatcgcaccaatttcattcat 13224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 13285 - 13379
Alignment:
Q  299 aacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  13285 aacctaattttttccctctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattc 13379  T

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Target: scaffold0294 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 12496 - 12386
Alignment:
Q  260 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac--aaa 357  Q
    |||| |||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||  |||    
T  12496 catccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaaaa 12397  T
Q  358 ttccatctaaa 368  Q
    |||||||||||    
T  12396 ttccatctaaa 12386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 388
Target Start/End: Complemental strand, 14692 - 14562
Alignment:
Q  259 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 358  Q
    ||||| |||||||||||||||||||| | |||| ||||||||| |||||| ||| |||||||||| |||||||  |||||||||||||||||||||||||    
T  14692 acatccttatttattaattttgttacatttgcatcaatttaacttaatttattctcgctcatttgttttattagatttgcaattatttaacctaacaaat 14593  T
Q  359 tccatct-aaaaaatgcatcgcaccaatttc 388  Q
    || |||| |||||||||||| || |||||||    
T  14592 tctatctaaaaaaatgcatcccatcaatttc 14562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 389
Target Start/End: Complemental strand, 196803 - 196680
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaat-tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 363  Q
    |||||||||||||||||||  |   |||| |||||||||||| ||||| ||||||||||||| ||||| ||| |   | |||||||||||||||||||||    
T  196803 ttatttattaattttgttagat---cagccatttaacctaatattttttccgctcatttgctgtattaggttaggtgtaatttaacctaacaaattccat 196707  T
Q  364 ct-aaaaaatgcatcgcaccaatttca 389  Q
    || ||||||||||||||||||||||||    
T  196706 ctaaaaaaatgcatcgcaccaatttca 196680  T

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Target: scaffold0097 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 12735 - 12800
Alignment:
Q  328 attatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattc 392  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  12735 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattc 12800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 1152 - 1104
Alignment:
Q  344 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1152 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 357
Target Start/End: Complemental strand, 1018 - 958
Alignment:
Q  297 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 357  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  1018 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 29915 - 29867
Alignment:
Q  344 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29915 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 29867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 357
Target Start/End: Complemental strand, 29781 - 29721
Alignment:
Q  297 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 357  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  29781 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 29721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 9064 - 9113
Alignment:
Q  344 tttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 392  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9064 tttaacctaacaaattccatctaaaaaaatgcatcgcaccaatttcattc 9113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 9199 - 9259
Alignment:
Q  297 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 357  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  9199 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 9259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 45774 - 45814
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  45774 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 45814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 5415 - 5370
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttt 310  Q
    ||||||||||||||| |||  |||||||||| ||||||||||||||    
T  5415 ttatttattaattttattaggtctgcagcaacttaacctaattttt 5370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 5996 - 6045
Alignment:
Q  265 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 314  Q
    ||||||||||||||| |||  ||||| || ||||||||||||||||||||    
T  5996 ttatttattaattttattaggtctgcggcgatttaacctaattttttccc 6045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 11296 - 11256
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||||||||||| ||||| |||||||||| ||||    
T  11296 tgtacaatggggtgtatgaataaagtgtgttcatgtgacat 11256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 14243 - 14283
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  14243 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 24571 - 24611
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  24571 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 24611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 730 - 690
Alignment:
Q  222 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 262  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  730 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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