View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0225_low_52 (Length: 237)
Name: NF0225_low_52
Description: NF0225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0225_low_52 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 81 - 237
Target Start/End: Original strand, 49082847 - 49083003
Alignment:
| Q |
81 |
acagattatcatgcctcctcaaaaaataacatttccacagaataaactttatgttgctgcagaaaacaatgctgcaagcaatcattctagtggttccgtg |
180 |
Q |
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| T |
49082847 |
acagattaccatgcctcctcaaaatataacatttccacagaataaacttgatgttgctgcagaaaacaatgctgcaagcaatcattctagtggttctgtg |
49082946 |
T |
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| Q |
181 |
gcttccacacacaaaaatattgaatgcagtgnnnnnnntagtgagcctcatgtaagt |
237 |
Q |
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| T |
49082947 |
gcttccacacacaaaaatattgaatgcagtgaaaaaaatagtgagcctcatgtaagt |
49083003 |
T |
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