View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend
Query
Query hiting target
Query hiting target's complemental strand
Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0226-INSERTION-11 (Length: 467)
Name: NF0226-INSERTION-11
Description: NF0226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0226-INSERTION-11
Alignment Details
Target: chr2 (Bit Score: 412; Significance: 0; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 1 - 416
Target Start/End: Original strand, 41244431 - 41244846
Alignment:
Q
1
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaacctgatcataaaattagggttacaaaat
100
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
41244431
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaacctgatcataaaattagggttacaaaat
41244530
T
Q
101
caaaattagggttccagaaaattgaaaatcaaagattataagaaagaggatatgaaattcacctcagcagcaagatattcaagaacagcggcgaggtaaa
200
Q
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
41244531
caaaattagggttccagaaaattgaaaatcaaagattataagaatgaggatatgaaattcacctcagcagcaagatattcaagaacagcggcgaggtaaa
41244630
T
Q
201
caggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaccgaccgattcttccaactggaaattgaagaccagctctgatggatctggt
300
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
41244631
caggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaccgaccgattcttccaactggaaattgaagaccagctctgatggatctggt
41244730
T
Q
301
cacagacttcttccttggtcctccacctttccttccaccagctcctttcttcgtcttggtgcttgcgtccatttctgagattggaatttggaaccctaac
400
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
41244731
cacagacttcttccttggtcctccacctttccttccaccagctcctttcttcgtcttggtgcttgcgtccatttctgagattggaatttggaaccctaac
41244830
T
Q
401
ttttttgctacgaatt
416
Q
||||||||||||||||
T
41244831
ttttttgctacgaatt
41244846
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 153 - 416
Target Start/End: Complemental strand, 41257722 - 41257462
Alignment:
Q
153
tgaaattcacctcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaccg
252
Q
||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
T
41257722
tgaaattcacctcagcagcaagatattcaagaacagcagctaagtaaacaggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaacg
41257623
T
Q
253
accgattcttccaactggaaattgaagaccagctctgatggatctggtcacagacttcttccttggtcctccacctttccttccaccagctcctttcttc
352
Q
|||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||
T
41257622
accgattcttccgactggaaattgaagaccagctctggtggatcttgtcactgacttcttccttgg---accacctttccttccaccagctcccttcttc
41257526
T
Q
353
gtcttggtgcttgcgtccatttctgagattggaatttggaaccctaacttttttgctacgaatt
416
Q
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
T
41257525
gtcttggtgcttgcgtccatttctgagattggaatttggaactctagattttttgctacgaatt
41257462
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 41244381 - 41244435
Alignment:
Q
413
aattgtaactccagctaataattttcctagctcttcatcattcctcactgccaac
467
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
41244381
aattgtaactccagctaataattttcctagctcttcatcattcctcactgccaac
41244435
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 34622506 - 34622430
Alignment:
Q
161
acctcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagcgtatcttcc
237
Q
|||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||
T
34622506
acctcagcggcgagatattcaagaacagcggcgaggtaaacaggagcaccagcaccaacacgttcagcgtattttcc
34622430
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 34615019 - 34614943
Alignment:
Q
161
acctcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagcgtatcttcc
237
Q
||||||||||| ||||||||||||||||| || ||||||||||||||||||| ||||||||| | ||||||| ||||
T
34615019
acctcagcagcgagatattcaagaacagcagctaggtaaacaggagcaccagcaccaacacgttcagcgtattttcc
34614943
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41257863 - 41257787
Alignment:
Q
1
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaacctga
77
Q
|||||||||||||||| || || ||||| ||||||||||| |||||||| |||||||||||||| ||||||||||||
T
41257863
ccaacaacacgtgcctagggatgatcctgttcttcttgttgtcacgtgctgcatttccagccaactcaagaacctga
41257787
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 121; Significance: 8e-62; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 164 - 375
Target Start/End: Complemental strand, 24298145 - 24297931
Alignment:
Q
164
tcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaccgaccgattcttc
263
Q
||||||||||||||||||||||| || || ||||| || |||||||| || || |||||||||||||||||||||||||||||||| | |||||||||||
T
24298145
tcagcagcaagatattcaagaactgctgctaggtataccggagcacctgttccgacacgctgagcgtatcttcctttcttcaagtatctaccgattcttc
24298046
T
Q
264
caactggaaattgaagaccagctctgatggatctggtcacagacttcttccttggtcctccacctttccttccaccagctcctttcttcgt---cttggt
360
Q
| ||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||| ||| |
T
24298045
ccactggaaattgaagaccggctctgattgatcttgtcaccgacttcttccttggtcctcctcctttccttccaccggctcccttcttcgttgcctttgg
24297946
T
Q
361
gcttgcgtccatttc
375
Q
|||||||||||||||
T
24297945
gcttgcgtccatttc
24297931
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 161 - 375
Target Start/End: Original strand, 23423596 - 23423813
Alignment:
Q
161
acctcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaccgaccgattc
260
Q
||||||||||| |||||||||||||| || || ||||| || |||||||| || || |||||||||||||||||||||||||||||||| | ||||||||
T
23423596
acctcagcagcgagatattcaagaactgctgctaggtatactggagcacctgtgcctacacgctgagcgtatcttcctttcttcaagtatctaccgattc
23423695
T
Q
261
ttccaactggaaattgaagaccagctctgatggatctggtcacagacttcttccttggtcctccacctttccttccaccagctcctttct---tcgtctt
357
Q
||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||| || ||||| |||| | |||||
T
23423696
ttccaaccggaaattgaagaccagctctgatggatcttgtcaccgacttcttccttggtcctcctcccttccttcctcctgctcccttctttgttgtctt
23423795
T
Q
358
ggtgcttgcgtccatttc
375
Q
||||||||| ||||||||
T
23423796
ggtgcttgcctccatttc
23423813
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 161 - 375
Target Start/End: Complemental strand, 23875357 - 23875140
Alignment:
Q
161
acctcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaccgaccgattc
260
Q
||||||||||| |||||||||||||| || || ||||| || |||||||| || || |||||||||||||||||||||||||||||||| | ||||||||
T
23875357
acctcagcagcgagatattcaagaactgctgctaggtatactggagcacctgtgcctacacgctgagcgtatcttcctttcttcaagtatctaccgattc
23875258
T
Q
261
ttccaactggaaattgaagaccagctctgatggatctggtcacagacttcttccttggtcctccacctttccttccaccagctcctttct---tcgtctt
357
Q
|||| ||||||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||| |||| | |||||
T
23875257
ttcccactggaaattgaagaccggctctgattgatcttgtcaccgacttcttccttggacctcctcctttccttccaccggctcccttctttgttgtctt
23875158
T
Q
358
ggtgcttgcgtccatttc
375
Q
||||||||| ||||||||
T
23875157
ggtgcttgcctccatttc
23875140
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 161 - 351
Target Start/End: Original strand, 23448096 - 23448286
Alignment:
Q
161
acctcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaccgaccgattc
260
Q
||||||||||| |||||||||||||| || || ||||| || |||||||| || || |||||||||||||||||||||||||||||||| | ||||||||
T
23448096
acctcagcagcgagatattcaagaactgctgctaggtatactggagcacctgtgcctacacgctgagcgtatcttcctttcttcaagtatctaccgattc
23448195
T
Q
261
ttccaactggaaattgaagaccagctctgatggatctggtcacagacttcttccttggtcctccacctttccttccaccagctcctttctt
351
Q
|||| ||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||| |||| || ||||||||||| |||||||||||
T
23448196
ttcccactggaaattgaagaccggctctgattgatcttgtcaccgacttcttccttggttctcctcccttccttccaccggctcctttctt
23448286
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 161 - 374
Target Start/End: Complemental strand, 26827909 - 26827693
Alignment:
Q
161
acctcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaccgaccgattc
260
Q
||||||||||| || ||||||||||| || || |||||||| |||||||| || || ||||||||||| |||| |||||||||| ||| || |||||||
T
26827909
acctcagcagcgaggtattcaagaactgcagctaggtaaaccggagcaccggtgccgacacgctgagcatatcgacctttcttcaggtaacggccgattc
26827810
T
Q
261
ttccaactggaaattgaagaccagctctgatggatctggtcacagacttcttccttggtcctccacctttccttccaccagctcctttct---tcgtctt
357
Q
|||| ||||| ||||| || || |||||||||||||| ||||| |||||||||||||| ||||| || ||||||||||| |||||||||| | |||||
T
26827809
ttccgactgggaattggagtccggctctgatggatcttgtcaccgacttcttccttggacctcctcccttccttccaccggctcctttctttgttgtctt
26827710
T
Q
358
ggtgcttgcgtccattt
374
Q
|||||||||||||||||
T
26827709
ggtgcttgcgtccattt
26827693
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23423525 - 23423599
Alignment:
Q
1
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaacct
75
Q
|||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||
T
23423525
ccaacaacacatgccttggaatgattctattcttcttgttatcacgtgctgcatttccagccaactcaagaacct
23423599
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23448025 - 23448099
Alignment:
Q
1
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaacct
75
Q
|||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||
T
23448025
ccaacaacacatgccttggaatgattctattcttcttgttatcacgtgctgcatttccagccaactcaagaacct
23448099
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 23875428 - 23875354
Alignment:
Q
1
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaacct
75
Q
|||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||
T
23875428
ccaacaacacatgccttggaatgattctattcttcttgttatcacgtgctgcatttccagccaactcaagaacct
23875354
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24298219 - 24298147
Alignment:
Q
1
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaac
73
Q
|||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||
T
24298219
ccaacaacacatgccttggaatgattctattcttcttgttatcacgtgctgcatttccagccaactcaagaac
24298147
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 23446673 - 23446743
Alignment:
Q
3
aacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaac
73
Q
||||||| ||||||||||| || |||||||||||||||||||| || |||||||||||||| ||||||||
T
23446673
aacaacaaatgccttggaataattctattcttcttgttatcacgagctgcatttccagccaactcaagaac
23446743
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26827980 - 26827906
Alignment:
Q
1
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaacct
75
Q
||||||||| ||||||||||| || |||||||||||||||||||| || || ||||| ||||||||||||||||
T
26827980
ccaacaacaaatgccttggaatgattctattcttcttgttatcacgagcagcgtttcctgccaattcaagaacct
26827906
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 23446745 - 23446809
Alignment:
Q
164
tcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagc
228
Q
||||||||||||||||||||||| || || ||||| || |||||||| || || |||||||||||
T
23446745
tcagcagcaagatattcaagaactgctgccaggtatactggagcaccggttccgacacgctgagc
23446809
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 164 - 374
Target Start/End: Complemental strand, 35961688 - 35961475
Alignment:
Q
164
tcagcagcaagatattcaagaacagcggcgaggtaaacaggagcaccagtaccaacacgctgagcgtatcttcctttcttcaagtaccgaccgattcttc
263
Q
||||||||||||||||||||||||||||| | ||||||||||||||| || || ||||| ||||| |||| |||||||||||||| || ||||||||||
T
35961688
tcagcagcaagatattcaagaacagcggctaagtaaacaggagcaccggtgccgacacgttgagcatatcgacctttcttcaagtaacggccgattcttc
35961589
T
Q
264
caactggaaattgaagaccagctctgatggatctggtcacagacttcttccttggtcctccacctttccttccaccagctcctttcttcgt---cttggt
360
Q
| ||||| |||||||| || |||||||| ||||| || || |||||||||||||||||||| ||||| ||||| || |||||||||||||| ||| ||
T
35961588
ccactgggaattgaagtccggctctgattgatcttgttaccgacttcttccttggtcctccgccttttcttcctcctgctcctttcttcgttgcctttgt
35961489
T
Q
361
gcttgcgtccattt
374
Q
||||||||||||||
T
35961488
gcttgcgtccattt
35961475
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35961762 - 35961690
Alignment:
Q
1
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaac
73
Q
|||||||||| ||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||
T
35961762
ccaacaacacatgccttggaataatcctattcttcttgttatcacgagcagcattaccagccaattcaagaac
35961690
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12165178 - 12165104
Alignment:
Q
1
ccaacaacacgtgccttggaattatcctattcttcttgttatcacgtgccgcatttccagccaattcaagaacct
75
Q
|||||||||| ||||||||||| || |||||||||||||||||||| || |||||||||||||| ||||||||||
T
12165178
ccaacaacacatgccttggaatgattctattcttcttgttatcacgagctgcatttccagccaactcaagaacct
12165104
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 46584569 - 46584524
Alignment:
Q
30
ttcttcttgttatcacgtgccgcatttccagccaattcaagaacct
75
Q
|||||||||||||| | ||| ||||| |||||||||||||||||||
T
46584569
ttcttcttgttatctcttgcagcattcccagccaattcaagaacct
46584524
T
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
SLOT GACOR - FITUR MAXWIN GAMPANG SCATTER HITAM DI LINK SLOT MAXWIN HARI INI
SLOT GACOR - FITUR MAXWIN GAMPANG SCATTER HITAM DI LINK SLOT MAXWIN HARI INI
Main Slot gacor sambil tembak langit pasti di link slot maxwin hari ini , daftar yuk id mu sekarang !!
Auroratoto & Situs Gacor Terpercaya
Maxi188, Hanomantoto, Togeljackpot, Wukong778
Auroratoto2 kami jamin akan bayar kemenangan Anda! Bergabung sekarang di Auroratoto, Maxi188, Hanomantoto, Togeljackpot, dan Wukong778 untuk pengalaman slot dan togel gacor dengan jackpot besar!
>
Rp.10.000 100% Tanpa Potongan
Visitors: 7067