View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0226-INSERTION-19 (Length: 626)

Name: NF0226-INSERTION-19
Description: NF0226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0226-INSERTION-19
NF0226-INSERTION-19
[»] chr6 (46 HSPs)
chr6 (1-173)||(32831725-32831897)
chr6 (334-514)||(15546628-15546805)
chr6 (335-514)||(21379940-21380116)
chr6 (335-497)||(885397-885557)
chr6 (334-495)||(8091076-8091235)
chr6 (337-497)||(7808621-7808779)
chr6 (335-497)||(11687142-11687302)
chr6 (335-496)||(14393574-14393736)
chr6 (335-497)||(4890479-4890640)
chr6 (348-495)||(20501720-20501865)
chr6 (344-496)||(3368998-3369148)
chr6 (367-497)||(13439707-13439836)
chr6 (336-495)||(18998117-18998274)
chr6 (334-492)||(13172572-13172727)
chr6 (340-497)||(29609013-29609168)
chr6 (349-439)||(4238922-4239012)
chr6 (367-439)||(31764356-31764428)
chr6 (334-389)||(4890599-4890654)
chr6 (334-389)||(21380059-21380114)
chr6 (340-437)||(2599060-2599156)
chr6 (336-389)||(3368985-3369038)
chr6 (336-389)||(11687261-11687314)
chr6 (337-389)||(8091063-8091115)
chr6 (369-433)||(17279601-17279665)
chr6 (366-413)||(6433751-6433798)
chr6 (334-389)||(13439693-13439748)
chr6 (334-389)||(15546630-15546685)
chr6 (336-437)||(17367064-17367158)
chr6 (335-389)||(885384-885438)
chr6 (366-436)||(7187633-7187703)
chr6 (455-497)||(7808726-7808768)
chr6 (456-497)||(4890492-4890533)
chr6 (334-391)||(6433688-6433745)
chr6 (456-497)||(21379953-21379994)
chr6 (373-437)||(30905046-30905110)
chr6 (338-389)||(18998235-18998286)
chr6 (267-306)||(33051546-33051585)
chr6 (455-497)||(11687155-11687197)
chr6 (456-497)||(8091180-8091221)
chr6 (456-497)||(15546750-15546791)
chr6 (336-389)||(20501706-20501759)
chr6 (455-496)||(20501823-20501864)
chr6 (340-389)||(31764443-31764492)
chr6 (398-439)||(34522322-34522363)
chr6 (448-496)||(4179136-4179184)
chr6 (349-389)||(14393574-14393614)
[»] chr4 (56 HSPs)
chr4 (334-497)||(42274490-42274652)
chr4 (335-497)||(1298924-1299084)
chr4 (333-497)||(530666-530828)
chr4 (335-497)||(18417669-18417829)
chr4 (334-439)||(24915792-24915897)
chr4 (334-497)||(55107536-55107697)
chr4 (336-497)||(20435140-20435299)
chr4 (336-439)||(27434678-27434781)
chr4 (334-495)||(13204391-13204550)
chr4 (338-497)||(24969543-24969703)
chr4 (334-438)||(21048703-21048807)
chr4 (337-439)||(32318721-32318823)
chr4 (335-496)||(35360689-35360847)
chr4 (337-497)||(4688248-4688407)
chr4 (334-496)||(23928566-23928725)
chr4 (334-497)||(4552797-4552958)
chr4 (335-497)||(3422428-3422588)
chr4 (336-439)||(55049400-55049503)
chr4 (335-497)||(28809845-28810006)
chr4 (367-437)||(4895042-4895113)
chr4 (334-409)||(43486198-43486273)
chr4 (349-435)||(9355566-9355652)
chr4 (370-436)||(56552132-56552198)
chr4 (367-438)||(24294536-24294607)
chr4 (349-439)||(2272434-2272524)
chr4 (399-497)||(52824251-52824347)
chr4 (367-438)||(16995585-16995656)
chr4 (338-437)||(36030941-36031031)
chr4 (334-389)||(52824237-52824292)
chr4 (336-389)||(530787-530840)
chr4 (337-389)||(18417658-18417710)
chr4 (334-389)||(1298910-1298965)
chr4 (340-435)||(19600944-19601039)
chr4 (334-389)||(20435258-20435313)
chr4 (404-438)||(52587383-52587417)
chr4 (456-497)||(24915806-24915847)
chr4 (336-389)||(24969662-24969715)
chr4 (456-496)||(27434728-27434768)
chr4 (337-389)||(42274611-42274663)
chr4 (334-409)||(11330104-11330179)
chr4 (334-389)||(32318838-32318893)
chr4 (456-515)||(42274487-42274545)
chr4 (335-389)||(13204376-13204430)
chr4 (367-437)||(23481952-23482022)
chr4 (366-436)||(47452840-47452910)
chr4 (456-497)||(530681-530722)
chr4 (456-497)||(1299030-1299071)
chr4 (456-497)||(4688259-4688300)
chr4 (336-389)||(23928685-23928738)
chr4 (456-497)||(24969553-24969594)
chr4 (456-497)||(32318732-32318773)
chr4 (336-389)||(55107524-55107577)
chr4 (337-389)||(4688366-4688418)
chr4 (456-496)||(9355566-9355606)
chr4 (335-387)||(28809967-28810019)
chr4 (456-496)||(55049413-55049453)
[»] chr2 (59 HSPs)
chr2 (334-496)||(24101830-24101990)
chr2 (336-497)||(45408637-45408796)
chr2 (334-497)||(1923978-1924140)
chr2 (336-518)||(16705725-16705904)
chr2 (335-497)||(34490468-34490628)
chr2 (340-493)||(12850546-12850697)
chr2 (334-497)||(3116888-3117049)
chr2 (334-497)||(7737076-7737238)
chr2 (327-497)||(9933561-9933728)
chr2 (334-497)||(42713775-42713937)
chr2 (335-497)||(22269734-22269894)
chr2 (336-497)||(2818678-2818837)
chr2 (365-496)||(23835889-23836019)
chr2 (334-496)||(27920585-27920745)
chr2 (336-497)||(9281347-9281506)
chr2 (335-496)||(43475957-43476118)
chr2 (366-482)||(9850788-9850901)
chr2 (334-497)||(20892896-20893057)
chr2 (334-439)||(6605803-6605907)
chr2 (338-497)||(34455897-34456054)
chr2 (367-437)||(40362553-40362622)
chr2 (349-439)||(7116438-7116528)
chr2 (334-391)||(43858550-43858607)
chr2 (367-496)||(29229394-29229522)
chr2 (367-496)||(29342694-29342822)
chr2 (336-389)||(24101950-24102003)
chr2 (350-439)||(39242997-39243086)
chr2 (334-389)||(9933687-9933742)
chr2 (337-404)||(10552984-10553051)
chr2 (334-389)||(16705731-16705786)
chr2 (335-389)||(9281465-9281519)
chr2 (367-437)||(17500037-17500107)
chr2 (335-389)||(23835875-23835929)
chr2 (348-389)||(29229482-29229523)
chr2 (348-389)||(29342782-29342823)
chr2 (335-389)||(1924099-1924153)
chr2 (367-409)||(17434728-17434770)
chr2 (335-389)||(20892883-20892937)
chr2 (456-514)||(24101828-24101885)
chr2 (455-497)||(34490573-34490615)
chr2 (456-497)||(2818784-2818825)
chr2 (456-497)||(10552999-10553040)
chr2 (336-389)||(34455885-34455938)
chr2 (456-497)||(43476064-43476105)
chr2 (456-492)||(42713794-42713830)
chr2 (456-515)||(1923975-1924033)
chr2 (334-389)||(45408623-45408678)
chr2 (335-389)||(3116875-3116929)
chr2 (335-389)||(34490455-34490509)
chr2 (340-389)||(7116374-7116423)
chr2 (456-497)||(7737183-7737224)
chr2 (336-389)||(12850660-12850713)
chr2 (456-497)||(16705851-16705892)
chr2 (456-497)||(17434799-17434840)
chr2 (455-496)||(22269839-22269880)
chr2 (456-497)||(43858552-43858593)
chr2 (456-497)||(45408743-45408784)
chr2 (349-389)||(2818679-2818719)
chr2 (411-439)||(17434755-17434783)
[»] chr3 (104 HSPs)
chr3 (334-497)||(21969155-21969316)
chr3 (334-497)||(21991591-21991752)
chr3 (335-497)||(4072272-4072433)
chr3 (337-497)||(10254580-10254739)
chr3 (338-497)||(32237396-32237553)
chr3 (335-497)||(45487811-45487971)
chr3 (334-496)||(25446263-25446422)
chr3 (335-497)||(26906466-26906626)
chr3 (335-497)||(36278755-36278915)
chr3 (334-517)||(10441256-10441436)
chr3 (334-497)||(25561023-25561184)
chr3 (335-497)||(36657432-36657592)
chr3 (334-496)||(50099445-50099607)
chr3 (335-497)||(3970490-3970650)
chr3 (335-497)||(36822759-36822919)
chr3 (336-497)||(25488341-25488500)
chr3 (334-495)||(55340291-55340451)
chr3 (337-497)||(8831752-8831911)
chr3 (334-497)||(10117527-10117684)
chr3 (334-497)||(12789618-12789779)
chr3 (338-513)||(12838074-12838246)
chr3 (336-497)||(13078163-13078322)
chr3 (337-497)||(10017126-10017279)
chr3 (334-497)||(39850342-39850504)
chr3 (334-510)||(43639079-43639253)
chr3 (334-497)||(44611380-44611540)
chr3 (336-478)||(22101195-22101336)
chr3 (335-439)||(35368801-35368905)
chr3 (336-478)||(22176139-22176280)
chr3 (338-439)||(44920649-44920749)
chr3 (334-497)||(26976840-26977001)
chr3 (336-497)||(45712903-45713062)
chr3 (335-430)||(26977767-26977862)
chr3 (321-439)||(46679329-46679447)
chr3 (340-497)||(5529903-5530059)
chr3 (337-514)||(13723989-13724163)
chr3 (348-439)||(404113-404204)
chr3 (328-435)||(42105375-42105482)
chr3 (368-493)||(43150496-43150619)
chr3 (373-496)||(37506164-37506284)
chr3 (340-497)||(1476555-1476710)
chr3 (340-437)||(297541-297638)
chr3 (335-495)||(36329187-36329337)
chr3 (376-437)||(157008-157069)
chr3 (359-437)||(49984001-49984079)
chr3 (399-497)||(38125242-38125338)
chr3 (326-497)||(46664188-46664356)
chr3 (373-439)||(32363122-32363188)
chr3 (350-432)||(46222042-46222124)
chr3 (355-436)||(37536941-37537022)
chr3 (374-435)||(39677312-39677373)
chr3 (334-389)||(3970609-3970664)
chr3 (334-389)||(36657551-36657606)
chr3 (334-389)||(45487797-45487852)
chr3 (335-389)||(21969275-21969329)
chr3 (335-389)||(21991711-21991765)
chr3 (335-389)||(26906453-26906507)
chr3 (456-497)||(32237406-32237447)
chr3 (336-389)||(36278874-36278927)
chr3 (334-389)||(4072392-4072447)
chr3 (334-389)||(12789604-12789659)
chr3 (448-495)||(32362875-32362922)
chr3 (334-389)||(35368547-35368602)
chr3 (334-389)||(46664174-46664229)
chr3 (456-514)||(21969153-21969210)
chr3 (456-514)||(21991589-21991646)
chr3 (335-389)||(25488459-25488513)
chr3 (335-389)||(25561010-25561064)
chr3 (335-389)||(32237512-32237566)
chr3 (455-497)||(39850356-39850398)
chr3 (335-389)||(39850463-39850517)
chr3 (456-497)||(10117629-10117670)
chr3 (456-497)||(10254687-10254728)
chr3 (336-389)||(13078281-13078334)
chr3 (456-497)||(45487917-45487958)
chr3 (456-497)||(50099552-50099593)
chr3 (366-438)||(4567250-4567322)
chr3 (337-389)||(5529892-5529944)
chr3 (337-389)||(10017115-10017167)
chr3 (337-389)||(10254569-10254621)
chr3 (325-389)||(12838067-12838130)
chr3 (456-496)||(25446368-25446408)
chr3 (334-389)||(1476669-1476724)
chr3 (334-389)||(10441376-10441431)
chr3 (456-515)||(12838195-12838253)
chr3 (455-514)||(35368545-35368603)
chr3 (338-389)||(43639200-43639251)
chr3 (335-389)||(25446250-25446302)
chr3 (455-497)||(36657445-36657487)
chr3 (455-497)||(36822772-36822814)
chr3 (335-389)||(38125297-38125351)
chr3 (339-389)||(45713021-45713071)
chr3 (456-493)||(3970507-3970544)
chr3 (456-497)||(4072285-4072326)
chr3 (340-389)||(8831744-8831793)
chr3 (456-493)||(13078179-13078216)
chr3 (336-389)||(32362861-32362914)
chr3 (336-389)||(36822878-36822931)
chr3 (373-434)||(51579004-51579065)
chr3 (336-389)||(55340412-55340465)
chr3 (461-497)||(10017232-10017268)
chr3 (337-389)||(10117516-10117568)
chr3 (456-496)||(25488354-25488394)
chr3 (456-496)||(25561129-25561169)
[»] chr1 (87 HSPs)
chr1 (338-497)||(5189481-5189638)
chr1 (334-497)||(47940568-47940730)
chr1 (338-497)||(14387017-14387174)
chr1 (335-497)||(27240923-27241083)
chr1 (336-497)||(9978051-9978211)
chr1 (334-497)||(2854530-2854691)
chr1 (338-497)||(15324638-15324796)
chr1 (334-497)||(23698500-23698661)
chr1 (335-514)||(42561294-42561470)
chr1 (334-497)||(19954909-19955070)
chr1 (334-497)||(48954212-48954373)
chr1 (334-497)||(50627143-50627304)
chr1 (358-497)||(4299414-4299554)
chr1 (337-497)||(3607730-3607888)
chr1 (337-497)||(19796982-19797140)
chr1 (337-495)||(1387793-1387948)
chr1 (335-497)||(50162537-50162698)
chr1 (336-496)||(27926251-27926410)
chr1 (335-495)||(40647130-40647290)
chr1 (366-497)||(6079396-6079525)
chr1 (335-434)||(36880584-36880683)
chr1 (350-496)||(27928312-27928456)
chr1 (334-487)||(26208446-26208598)
chr1 (334-495)||(21930394-21930551)
chr1 (336-497)||(2125070-2125229)
chr1 (350-438)||(957658-957746)
chr1 (335-439)||(49284293-49284397)
chr1 (334-438)||(51789595-51789699)
chr1 (336-497)||(51276695-51276854)
chr1 (366-438)||(48645044-48645116)
chr1 (351-437)||(27670213-27670299)
chr1 (334-402)||(362462-362530)
chr1 (340-439)||(50856325-50856424)
chr1 (349-439)||(22338997-22339087)
chr1 (380-437)||(29598393-29598450)
chr1 (367-436)||(36007851-36007920)
chr1 (378-438)||(5059604-5059664)
chr1 (390-438)||(9895322-9895370)
chr1 (334-389)||(5189467-5189522)
chr1 (334-389)||(19955029-19955084)
chr1 (334-389)||(49285093-49285148)
chr1 (335-389)||(2854650-2854704)
chr1 (335-389)||(19797099-19797153)
chr1 (335-389)||(48954332-48954386)
chr1 (448-514)||(49285085-49285150)
chr1 (335-389)||(50627130-50627184)
chr1 (336-389)||(23698620-23698673)
chr1 (336-389)||(27926370-27926423)
chr1 (377-429)||(2302481-2302533)
chr1 (337-389)||(9978170-9978222)
chr1 (457-497)||(25297966-25298006)
chr1 (335-391)||(29598453-29598509)
chr1 (368-436)||(39015225-39015293)
chr1 (334-389)||(2125188-2125243)
chr1 (334-389)||(3607847-3607902)
chr1 (334-389)||(15324624-15324679)
chr1 (334-389)||(42561413-42561468)
chr1 (334-389)||(47940689-47940744)
chr1 (334-389)||(51789713-51789768)
chr1 (335-389)||(4299513-4299567)
chr1 (335-389)||(9895252-9895306)
chr1 (352-439)||(16518314-16518403)
chr1 (367-437)||(42010431-42010501)
chr1 (456-497)||(1387896-1387937)
chr1 (456-497)||(21930496-21930537)
chr1 (456-497)||(27240936-27240977)
chr1 (336-389)||(27928416-27928469)
chr1 (337-389)||(14387133-14387185)
chr1 (336-388)||(25297966-25298018)
chr1 (407-439)||(28244026-28244058)
chr1 (456-496)||(42561308-42561348)
chr1 (338-394)||(50162652-50162708)
chr1 (456-516)||(51789591-51789650)
chr1 (350-389)||(21930394-21930433)
chr1 (334-389)||(27241042-27241097)
chr1 (340-439)||(28431706-28431805)
chr1 (373-439)||(35547737-35547803)
chr1 (455-497)||(36880628-36880670)
chr1 (456-514)||(47940566-47940623)
chr1 (456-497)||(5189587-5189628)
chr1 (395-436)||(25559214-25559255)
chr1 (340-409)||(28447894-28447963)
chr1 (336-389)||(40647116-40647169)
chr1 (456-496)||(15324745-15324785)
chr1 (396-436)||(18651310-18651350)
chr1 (456-508)||(27670261-27670313)
chr1 (337-389)||(51276813-51276865)
[»] scaffold0122 (3 HSPs)
scaffold0122 (336-514)||(45830-46005)
scaffold0122 (328-389)||(45826-45887)
scaffold0122 (456-497)||(45952-45993)
[»] chr7 (70 HSPs)
chr7 (349-497)||(30594705-30594851)
chr7 (336-514)||(31231614-31231791)
chr7 (336-497)||(24836032-24836191)
chr7 (334-497)||(34052291-34052452)
chr7 (335-497)||(30259065-30259225)
chr7 (336-497)||(20184238-20184398)
chr7 (336-497)||(38883233-38883392)
chr7 (336-497)||(10936470-10936629)
chr7 (334-497)||(35339276-35339437)
chr7 (334-495)||(3953040-3953199)
chr7 (336-478)||(24123755-24123897)
chr7 (337-439)||(31521527-31521628)
chr7 (335-497)||(12142204-12142365)
chr7 (335-496)||(39617840-39618000)
chr7 (336-493)||(45997508-45997663)
chr7 (338-497)||(37093780-37093937)
chr7 (336-497)||(48103380-48103536)
chr7 (337-497)||(39143713-39143865)
chr7 (334-438)||(40358184-40358291)
chr7 (336-497)||(9285714-9285873)
chr7 (336-497)||(9289781-9289940)
chr7 (367-439)||(16876487-16876559)
chr7 (335-493)||(25742434-25742586)
chr7 (349-438)||(38989084-38989173)
chr7 (393-497)||(38528467-38528571)
chr7 (366-436)||(10398390-10398460)
chr7 (335-409)||(35665632-35665706)
chr7 (340-439)||(29277905-29278004)
chr7 (367-438)||(33749713-33749784)
chr7 (325-389)||(38528530-38528594)
chr7 (334-389)||(9285832-9285887)
chr7 (334-389)||(9289899-9289954)
chr7 (334-389)||(31231734-31231789)
chr7 (167-210)||(46144023-46144066)
chr7 (335-389)||(10936588-10936642)
chr7 (334-388)||(33721825-33721879)
chr7 (335-389)||(38883220-38883274)
chr7 (411-497)||(35665691-35665775)
chr7 (335-437)||(47237432-47237526)
chr7 (334-389)||(20184357-20184412)
chr7 (456-497)||(24836138-24836179)
chr7 (336-389)||(29277838-29277891)
chr7 (336-389)||(34052279-34052332)
chr7 (456-497)||(35339290-35339331)
chr7 (334-389)||(24836018-24836073)
chr7 (457-497)||(33721839-33721879)
chr7 (337-389)||(35665734-35665786)
chr7 (334-389)||(30259184-30259239)
chr7 (334-389)||(30594691-30594746)
chr7 (456-507)||(30594811-30594861)
chr7 (338-389)||(35339396-35339447)
chr7 (334-389)||(37093766-37093821)
chr7 (377-432)||(44148722-44148777)
chr7 (334-389)||(47237546-47237601)
chr7 (394-436)||(1402990-1403032)
chr7 (456-498)||(12142311-12142353)
chr7 (394-436)||(25572883-25572925)
chr7 (455-497)||(35665645-35665687)
chr7 (455-497)||(38883338-38883380)
chr7 (336-389)||(3953160-3953213)
chr7 (372-437)||(7955051-7955116)
chr7 (456-497)||(20184250-20184291)
chr7 (373-430)||(21581183-21581240)
chr7 (456-497)||(30259078-30259119)
chr7 (456-497)||(31231626-31231667)
chr7 (367-436)||(32482245-32482314)
chr7 (456-497)||(34052397-34052438)
chr7 (456-496)||(10936483-10936523)
chr7 (456-496)||(25742448-25742488)
chr7 (449-497)||(47237539-47237587)
[»] chr8 (49 HSPs)
chr8 (334-497)||(15882212-15882374)
chr8 (340-493)||(29780963-29781114)
chr8 (338-486)||(40891036-40891182)
chr8 (334-497)||(17426626-17426789)
chr8 (338-497)||(37114250-37114407)
chr8 (335-496)||(38629487-38629646)
chr8 (335-497)||(8210335-8210495)
chr8 (333-497)||(38520030-38520192)
chr8 (333-495)||(23940801-23940962)
chr8 (334-519)||(12234457-12234640)
chr8 (335-498)||(24741822-24741983)
chr8 (336-438)||(33100645-33100747)
chr8 (349-437)||(4261989-4262077)
chr8 (334-497)||(24211276-24211437)
chr8 (367-438)||(11828627-11828698)
chr8 (334-434)||(35467243-35467343)
chr8 (340-437)||(14834676-14834770)
chr8 (367-439)||(38405207-38405279)
chr8 (334-389)||(38520016-38520071)
chr8 (336-426)||(38515585-38515675)
chr8 (335-439)||(40393791-40393894)
chr8 (335-389)||(38629473-38629527)
chr8 (456-497)||(38629592-38629633)
chr8 (373-436)||(7959857-7959920)
chr8 (335-390)||(8210322-8210377)
chr8 (334-389)||(15882198-15882253)
chr8 (334-389)||(29781077-29781132)
chr8 (456-510)||(40891131-40891184)
chr8 (456-497)||(15882319-15882360)
chr8 (456-497)||(24741835-24741876)
chr8 (348-405)||(33940710-33940767)
chr8 (336-384)||(24211401-24211449)
chr8 (456-496)||(33940726-33940766)
chr8 (337-389)||(37114239-37114291)
chr8 (386-433)||(9775250-9775297)
chr8 (386-437)||(25264277-25264328)
chr8 (401-436)||(29869938-29869973)
chr8 (335-389)||(11828721-11828775)
chr8 (335-389)||(17426748-17426802)
chr8 (455-497)||(33100657-33100699)
chr8 (456-493)||(11828612-11828649)
chr8 (456-497)||(17426640-17426681)
chr8 (336-389)||(23940923-23940976)
chr8 (456-497)||(29780971-29781012)
chr8 (355-436)||(33390717-33390798)
chr8 (456-496)||(4261989-4262029)
chr8 (456-496)||(14834685-14834725)
chr8 (325-389)||(35467161-35467224)
chr8 (456-496)||(35467288-35467328)
[»] scaffold0188 (3 HSPs)
scaffold0188 (335-497)||(7098-7258)
scaffold0188 (335-389)||(7085-7139)
scaffold0188 (456-497)||(7204-7245)
[»] chr5 (57 HSPs)
chr5 (334-497)||(33629343-33629506)
chr5 (324-497)||(35420600-35420771)
chr5 (336-515)||(15855838-15856014)
chr5 (334-497)||(1138571-1138732)
chr5 (336-497)||(16472967-16473126)
chr5 (327-496)||(43539120-43539287)
chr5 (334-522)||(4265970-4266155)
chr5 (334-497)||(20476443-20476604)
chr5 (328-496)||(13754283-13754449)
chr5 (372-497)||(24397282-24397405)
chr5 (334-497)||(21259728-21259889)
chr5 (334-495)||(12807925-12808084)
chr5 (334-486)||(12744849-12744999)
chr5 (340-439)||(19976330-19976429)
chr5 (350-478)||(21261974-21262100)
chr5 (340-438)||(32623219-32623317)
chr5 (334-437)||(780792-780895)
chr5 (336-423)||(21591213-21591300)
chr5 (336-423)||(21595330-21595417)
chr5 (349-439)||(1456035-1456125)
chr5 (334-436)||(37552306-37552408)
chr5 (367-438)||(35276323-35276394)
chr5 (366-436)||(37655182-37655252)
chr5 (374-497)||(8364668-8364789)
chr5 (367-439)||(18236536-18236608)
chr5 (340-496)||(35806948-35807102)
chr5 (335-389)||(21259848-21259902)
chr5 (354-420)||(28056179-28056245)
chr5 (349-422)||(2529066-2529139)
chr5 (334-389)||(15855841-15855896)
chr5 (334-389)||(35420730-35420785)
chr5 (386-497)||(1164845-1164955)
chr5 (336-389)||(1164914-1164967)
chr5 (456-497)||(4266100-4266141)
chr5 (456-497)||(32623227-32623268)
chr5 (338-389)||(24397364-24397415)
chr5 (334-389)||(33629465-33629520)
chr5 (334-389)||(35806933-35806988)
chr5 (335-389)||(16472954-16473008)
chr5 (336-389)||(13754409-13754462)
chr5 (456-497)||(20476549-20476590)
chr5 (456-497)||(43539225-43539266)
chr5 (381-429)||(1384373-1384421)
chr5 (396-436)||(2538467-2538507)
chr5 (334-389)||(4265980-4266035)
chr5 (334-389)||(20476429-20476484)
chr5 (455-514)||(35420608-35420666)
chr5 (335-389)||(1138558-1138612)
chr5 (402-436)||(12257580-12257614)
chr5 (455-497)||(15855960-15856002)
chr5 (455-497)||(16473072-16473114)
chr5 (336-409)||(2268703-2268776)
chr5 (340-389)||(8364748-8364797)
chr5 (456-497)||(13754303-13754344)
chr5 (405-437)||(735346-735378)
chr5 (456-496)||(4913267-4913307)
chr5 (457-489)||(10499947-10499979)
[»] scaffold0107 (2 HSPs)
scaffold0107 (334-514)||(51059-51236)
scaffold0107 (334-389)||(51061-51116)
[»] scaffold0137 (1 HSPs)
scaffold0137 (334-514)||(10112-10288)
[»] scaffold0086 (1 HSPs)
scaffold0086 (337-439)||(48194-48296)
[»] scaffold0163 (2 HSPs)
scaffold0163 (334-497)||(1937-2099)
scaffold0163 (336-389)||(2058-2111)
[»] scaffold0118 (1 HSPs)
scaffold0118 (337-497)||(14454-14612)
[»] scaffold0653 (2 HSPs)
scaffold0653 (336-497)||(3393-3552)
scaffold0653 (334-389)||(3511-3566)
[»] scaffold0013 (1 HSPs)
scaffold0013 (373-439)||(94240-94306)
[»] scaffold0595 (3 HSPs)
scaffold0595 (334-415)||(5797-5880)
scaffold0595 (448-497)||(5713-5762)
scaffold0595 (335-389)||(5700-5754)
[»] scaffold0018 (1 HSPs)
scaffold0018 (349-439)||(138290-138380)
[»] scaffold0069 (2 HSPs)
scaffold0069 (334-389)||(26403-26458)
scaffold0069 (450-497)||(26417-26464)
[»] scaffold0006 (1 HSPs)
scaffold0006 (336-407)||(72288-72359)
[»] scaffold0004 (1 HSPs)
scaffold0004 (373-402)||(90738-90767)


Alignment Details
Target: chr6 (Bit Score: 165; Significance: 6e-88; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 32831897 - 32831725
Alignment:
Q  1 tttagctatgcctgaatctcctagatggcttgtaatgaaaggtaattttcagtatgactcatactcatagtcagcacaattataaaactgaaccgaatcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32831897 tttagctatgcctgaatctcctagatggcttgtaatgaaaggtaattttcagtatgactcatactcatagtcagcacaattataaaactgaaccgaatcg 32831798  T
Q  101 tcagaccaaactgaacccgacataaaaacgagttcacgcatggaacaaagcaatttggtctgtttcttgaatt 173  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32831797 tcagaccaaactgaacccgacaaaaaaacgagttcacgtatggaacaaagcaatttggtctgtttcttgaatt 32831725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 334 - 514
Target Start/End: Complemental strand, 15546805 - 15546628
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15546805 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgtt 15546706  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    ||||||        |||||| ||||||||||||||||| | ||||||| ||||||||||||| |||||| ||||| |||||    
T  15546705 atatcc--aaaaaatatgtatttttagttaagaaccatacaaaaaacaactaaggaattgta-cctaagttttctcctttt 15546628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 335 - 514
Target Start/End: Original strand, 21379940 - 21380116
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||    
T  21379940 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgtta 21380039  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    |||||        |||||| ||||||||||||||||| |||||| |||||||||||||||| |||||| ||||| |||||    
T  21380040 tatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta-cctaagttttctcctttt 21380116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 885557 - 885397
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | |||||| |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  885557 aggagaaaacttaggtacaattccttaggtgcttttcctatgattcttaactaaattcatcatgattttctcaaatccataattttctcaaagtttgtta 885458  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| ||||||||||||||||| | |||| ||||||||||||||||||    
T  885457 tatcc--aaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 885397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 334 - 495
Target Start/End: Complemental strand, 8091235 - 8091076
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||| ||||| | |||||||||||||||||||||||||| ||| |||||| || |||||||||||||||||||||||||||    
T  8091235 aaggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgtt 8091136  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    ||||||        |||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  8091135 atatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta 8091076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 337 - 497
Target Start/End: Complemental strand, 7808779 - 7808621
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||    
T  7808779 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatctataattttctcaaagtttgttata 7808680  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||        |||||| |||||||||| |||||  |||||||||||||||||||||||||    
T  7808679 tcc--aaaaaatatgtatttttagttaaaaaccaaacgaaaaacacctaaggaattgtacc 7808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 11687142 - 11687302
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  || |||||||| |||||||||||||||||||||||||||||||    
T  11687142 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtta 11687241  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||         |||||| ||||||||||||||||| |||||| || |||||||||||||||    
T  11687242 tatc--aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 11687302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 335 - 496
Target Start/End: Complemental strand, 14393736 - 14393574
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| ||| |||||||||| | ||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  14393736 aggagaaaacttaggtataattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 14393637  T
Q  435 tatcc-nnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||         |||||| ||||||||||||| ||| |||||| |||||||||||||||||    
T  14393636 tatccaaaaagaaatatgtatttttagttaagaatcatacgaaaagcacctaaggaattgtac 14393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 4890479 - 4890640
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||| ||||| |  |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  4890479 aggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgtta 4890578  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        ||||   ||||||||||||||||| |||||| ||||||||||||||||||    
T  4890579 tatcc-aaaaaaatatgcgtttttagttaagaaccatacgaaaagcacctaaggaattgtacc 4890640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 348 - 495
Target Start/End: Complemental strand, 20501865 - 20501720
Alignment:
Q  348 agtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnn 447  Q
    ||||||||| ||||| | ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |||||||||||||||            
T  20501865 agtacaatttcttaggtgcttttcgtatggttcttaactaaaaataccatgatttcttcaaatccataattttctcgaagtttgttatatcc--aaaaaa 20501768  T
Q  448 tatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  20501767 tatgtatttttagttaagaaccatacgaaaaacacctaaggaattgta 20501720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 344 - 496
Target Start/End: Complemental strand, 3369148 - 3368998
Alignment:
Q  344 tttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnn 443  Q
    |||| ||||||||| |||| | |||||||||| |||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| |        
T  3369148 tttaggtacaattcgttaggtgcttttcgtatcgttcctaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatattc--aa 3369051  T
Q  444 nnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
        |||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  3369050 aaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtac 3368998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 367 - 497
Target Start/End: Complemental strand, 13439836 - 13439707
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaaga 466  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||        |||||| |||||| |||||    
T  13439836 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaaatatgtatttttagctaaga 13439738  T
Q  467 accatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||| ||||||  || ||||||||||||||    
T  13439737 accatacgaaaagtacttaaggaattgtacc 13439707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 336 - 495
Target Start/End: Original strand, 18998117 - 18998274
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| |  |||||||| | |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  18998117 ggagaaaacttaggtacaattccttaggtgtttttcgtacg-ttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttat 18998215  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    || |        |||||| ||||| ||||||||||| |||||| ||||||||||||||||    
T  18998216 at-caaaaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgta 18998274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 334 - 492
Target Start/End: Original strand, 13172572 - 13172727
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||  ||| |  ||||||||||||||||||||||||| |  || |||| ||||||||||||||||||||||||||||||    
T  13172572 aaggagaaaacttaggtacaattctctagatgtttttcgtatggttcttaactaaattcat-atcatttcctcaaatccataattttctcaaagtttgtt 13172670  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaatt 492  Q
    ||||||        |||||| ||||| ||||||||||| |||||||||| |||||||||    
T  13172671 atatcc--aaaaaatatgtatttttacttaagaaccatacgaaaaacacttaaggaatt 13172727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 340 - 497
Target Start/End: Complemental strand, 29609168 - 29609013
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||| ||| |||||||||||||| | |||||||||||||| ||||||||||| ||| |||||| || ||||||||||||||||||||||||||||| |||    
T  29609168 aaaacttacgtacaattccttagatgcttttcgtatggtttttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttatctcc 29609069  T
Q  440 nnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
             ||||| ||||||||||||||||  |||||| ||| ||| ||||||||||    
T  29609068 aaaaaag--atgtatttttagttaagaaccacacgaaaagcacttaaagaattgtacc 29609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 439
Target Start/End: Complemental strand, 4239012 - 4238922
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||||||||||   | ||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  4239012 gtacaattccttctgtgctttttgtatggttcttaattaaattcaccatgattttctcaaatccttaattttctcaaagtttgttatatcc 4238922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 367 - 439
Target Start/End: Original strand, 31764356 - 31764428
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||| |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| |||||    
T  31764356 tttttgtatggttcttaactaaattcaccattattttctcaaattcataattttctcaaagtttgttgtatcc 31764428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 4890654 - 4890599
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  4890654 aaggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 4890599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 21380114 - 21380059
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  21380114 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21380059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 437
Target Start/End: Original strand, 2599060 - 2599156
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||||| || || || ||||| ||||||| ||||  |||||||||||||| ||||||||||  |||||| ||||||||| |||||| |||||||||    
T  2599060 aaaatttatgtgcattttcttaggtactttttgtatcattcttaactaaattaaccatgatttgttcaaattcataatttt-tcaaagcttgttatat 2599156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 3368985 - 3369038
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| || ||||||||||||||| | ||||||||||||||||||||||||    
T  3368985 ggagaaaacttgagtacaattccttaggtgcttttcgtatggttcttaactaaa 3369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 11687314 - 11687261
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  11687314 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 11687261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 8091063 - 8091115
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  8091063 gagaaaatttagatacaattccttaggtgcttttcgtatggttcttaactaaa 8091115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 17279665 - 17279601
Alignment:
Q  369 ttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    ||||||| ||||||||||||||| | ||||||||  |||||| ||||||||| ||||||||||||    
T  17279665 ttcgtatagttcttaactaaattcatcatgatttcttcaaattcataattttatcaaagtttgtt 17279601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 413
Target Start/End: Complemental strand, 6433798 - 6433751
Alignment:
Q  366 cttttcgtatggttcttaactaaatttaccatgattttctcaaatcca 413  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||    
T  6433798 cttttcgtatggttcttaactaaattcactatgatttcctcaaatcca 6433751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 13439693 - 13439748
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||  |||||||||||||||||||| |||||    
T  13439693 aaggagaaaacttaggtacaattccttaagtacttttcgtatggttcttagctaaa 13439748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 15546630 - 15546685
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| ||||||||||||||||  |||| ||||||||||||||||||    
T  15546630 aaggagaaaacttaggtacaattccttagttgttttttgtatggttcttaactaaa 15546685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 336 - 437
Target Start/End: Original strand, 17367064 - 17367158
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||  | ||||||||||| |||||||||| ||       |||||  |||||| ||||||||||||||||||||||||    
T  17367064 ggagaaaacttaggtacaattccttatgttcttttcgtatgattcttaactagat-------gatttcatcaaattcataattttctcaaagtttgttat 17367156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 885384 - 885438
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  885384 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 885438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 7187703 - 7187633
Alignment:
Q  366 cttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||| |||| ||| ||||||||||  |||||||||| ||||||| |||| |||||||||||||| |||||    
T  7187703 ctttttgtatagttattaactaaataaaccatgatttactcaaattcatatttttctcaaagtttattata 7187633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 497
Target Start/End: Original strand, 7808726 - 7808768
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  7808726 ttttagttaagaaccatacgaaaagcacctaaggaattgtacc 7808768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 4890533 - 4890492
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  4890533 tttagttaagaaccatacgaaaaacacctaagaaattgtacc 4890492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 6433688 - 6433745
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatt 391  Q
    |||||||||| ||| ||| |||| ||||| | ||||||||||||||||||||||||||    
T  6433688 aaggagaaaacttaggtataatttcttaggtgcttttcgtatggttcttaactaaatt 6433745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 21379994 - 21379953
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  21379994 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 21379953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 437
Target Start/End: Complemental strand, 30905110 - 30905046
Alignment:
Q  373 tatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    ||||||| ||||||||||| | | |||| | |||||||| |||||||||||||||||| ||||||    
T  30905110 tatggtttttaactaaattcatcgtgatctactcaaatctataattttctcaaagttttttatat 30905046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 18998286 - 18998235
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||||  ||||||||||||| | ||||||||||||||||||| ||||    
T  18998286 agaaaatttagctacaattccttaggtgcttttcgtatggttcttaattaaa 18998235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 306
Target Start/End: Complemental strand, 33051585 - 33051546
Alignment:
Q  267 gctactttaactagcttttcattttgaggttaaaaatgac 306  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  33051585 gctactttaactagcttttcattttgagactaaaaatgac 33051546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 497
Target Start/End: Complemental strand, 11687197 - 11687155
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  11687197 ttttagttaagaaccatacgaaaagcatctaaggaattgtacc 11687155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 8091180 - 8091221
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  8091180 tttagttaagaaccatacgaaaagcacctaagcaattgtacc 8091221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 15546750 - 15546791
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||| ||||||||||| |||||| ||||||||||||||||||    
T  15546750 tttaattaagaaccatacgaaaagcacctaaggaattgtacc 15546791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 20501706 - 20501759
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| |||  ||||||||||||| |  |||||||||||||||||||||||    
T  20501706 ggagaaaacttagttacaattccttaggtgtttttcgtatggttcttaactaaa 20501759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 496
Target Start/End: Original strand, 20501823 - 20501864
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||||||||||||| |||||| |||||||| ||||||||    
T  20501823 ttttagttaagaaccatacgaaaagcacctaagaaattgtac 20501864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 31764492 - 31764443
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||| ||| |||||||| ||||| |||||||||||| |||||||||||||    
T  31764492 aaaacttaggtacaatttcttagatacttttcgtatagttcttaactaaa 31764443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 439
Target Start/End: Original strand, 34522322 - 34522363
Alignment:
Q  398 gattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||| |||| ||||||||||| ||||||||||||||||    
T  34522322 gattttcttaaattcataattttcttaaagtttgttatatcc 34522363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 448 - 496
Target Start/End: Original strand, 4179136 - 4179184
Alignment:
Q  448 tatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||| ||||||||||||||||| |||||||||  ||| |||||||||    
T  4179136 tatgtagttttagttaagaaccatacgaaaaacatttaaagaattgtac 4179184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 14393574 - 14393614
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  14393574 gtacaattccttaggtgcttttcgtatgattcttaactaaa 14393614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 1e-48; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 42274490 - 42274652
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  42274490 aaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 42274589  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        ||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  42274590 atatcc-aaaaaaatatatatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 42274652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 1299084 - 1298924
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1299084 aggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgtta 1298985  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| ||||||||||||||||| | |||| ||||||||||||||||||    
T  1298984 tatcc--aaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 1298924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 333 - 497
Target Start/End: Original strand, 530666 - 530828
Alignment:
Q  333 caaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgt 432  Q
    ||||||||||| ||| |||||||||||||| | ||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||    
T  530666 caaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatcatttcctcaaatccataattttctcaaagtttgt 530765  T
Q  433 tatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||        |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  530766 tatatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 530828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 18417829 - 18417669
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | ||||| ||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||    
T  18417829 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 18417730  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        ||| || ||||||||||||||||| |||||| ||||||||||||||||||    
T  18417729 tatcc--aaaaaatatatatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 18417669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 334 - 439
Target Start/End: Original strand, 24915792 - 24915897
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24915792 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgtt 24915891  T
Q  434 atatcc 439  Q
    ||||||    
T  24915892 atatcc 24915897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 55107697 - 55107536
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | ||||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  55107697 aaggagaaaacttaggtacaattccttaggtgctttttgtatggttctttactaaatttaccatgatttcctcaaatgcataattttctcaaagtttgtt 55107598  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| |||||||||||||||||  ||||| ||| ||||||||||||||    
T  55107597 atatcc--aaataatatgtatttttagttaagaaccatatgaaaagcacataaggaattgtacc 55107536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 20435140 - 20435299
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| |||  ||||||||||||| | |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||| |||||||||||    
T  20435140 ggagaaaacttatatacaattccttagatgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcgaagtttgttat 20435239  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||||||||||||||| |||||| ||||||| ||||||||||    
T  20435240 atcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtacc 20435299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 336 - 439
Target Start/End: Complemental strand, 27434781 - 27434678
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  27434781 ggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaatttaccataatttcctcaaattcataattttctcaaagtttgttat 27434682  T
Q  436 atcc 439  Q
    ||||    
T  27434681 atcc 27434678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 334 - 495
Target Start/End: Complemental strand, 13204550 - 13204391
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||  |||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  13204550 aaggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgtt 13204451  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    ||||||        |||||| ||||||||||||||||| | ||||  ||||||| |||||||    
T  13204450 atatcc--aaaaaatatgtatttttagttaagaaccatacaaaaagtacctaagtaattgta 13204391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 497
Target Start/End: Original strand, 24969543 - 24969703
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||| ||| ||||||||| |||| | |||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  24969543 agaaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatat 24969642  T
Q  438 cc-nnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||          ||||| |||||||||||||| || |||||| ||||||||||||||||||    
T  24969643 ccaaaaaaaaaaatgtatttttagttaagaactatacgaaaagcacctaaggaattgtacc 24969703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 334 - 438
Target Start/End: Original strand, 21048703 - 21048807
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||||||||| |||| | |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  21048703 aaggagaaaacttaggtacaattcgttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcgaagtttgtt 21048802  T
Q  434 atatc 438  Q
    |||||    
T  21048803 atatc 21048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 337 - 439
Target Start/End: Original strand, 32318721 - 32318823
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| ||| |||||||||||||  | |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  32318721 gagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaattcaccatgatttcctcagatccataattttctcaaagtttgttata 32318820  T
Q  437 tcc 439  Q
    |||    
T  32318821 tcc 32318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 335 - 496
Target Start/End: Complemental strand, 35360847 - 35360689
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| ||||||||  ||||||  ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||    
T  35360847 aggagaaaactta-gtacaattttttagttgtttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgtta 35360749  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||         |||||| ||||||||||||||||| ||||||| ||||||  ||||||||    
T  35360748 tatc--taaaaaatatgtatttttagttaagaaccatacgaaaaatacctaataaattgtac 35360689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 337 - 497
Target Start/End: Original strand, 4688248 - 4688407
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| ||| |||||||| ||||| | |||||||||||||||||||||||||| ||  |||||| ||||||| || ||||||||||||||||||||||    
T  4688248 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcactgtgatttcctcaaattcacaattttctcaaagtttgttata 4688347  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||        |||||| ||||| ||||||||||| |||||| || |||||||||||||||    
T  4688348 tcc-aaaaaaatatgtatttttaattaagaaccatacgaaaatcatctaaggaattgtacc 4688407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 23928566 - 23928725
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||||   |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  23928566 aaggagaaaacttaggtacaattccttagtgt-ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaaatttgtt 23928664  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||        ||  || ||||||||||||| ||| || ||| |||||||||||||||||    
T  23928665 atatccaaaaaaaata--tatttttagttaagaatcatacgcaaagcacctaaggaattgtac 23928725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 4552958 - 4552797
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||  | ||||  |||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  4552958 aaggagaaaacttaggtacaattccttatatgctttctgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgtt 4552859  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        ||| || |||||||||| ||||||  ||||| ||| ||||||||||||||    
T  4552858 atatcc--aaaaaatatttatttttagttaaaaaccatatgaaaagcacttaaggaattgtacc 4552797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 3422428 - 3422588
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||| ||||| | |||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||| ||     
T  3422428 aggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagtttattg 3422527  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||         ||  || |||||||||| |||||| |||||||||||||| ||||||||||    
T  3422528 tatcgtaaaaagata--tatttttagttaaaaaccatacgaaaaacacctaaagaattgtacc 3422588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 336 - 439
Target Start/End: Original strand, 55049400 - 55049503
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | |||||||||| ||||||||||||||| || ||||||| |||||| |||||||||| ||||||||||||||    
T  55049400 ggagaaaacttatgtacaattccttaggtgcttttcgtatagttcttaactaaattcactatgatttcctcaaacccataattttttcaaagtttgttat 55049499  T
Q  436 atcc 439  Q
    ||||    
T  55049500 atcc 55049503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 28809845 - 28810006
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaattt-accatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    ||||||||| ||| |||||||| ||||| | ||||| |||| ||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  28809845 aggagaaaacttaggtacaatttcttaggtgcttttggtattgtttttaactaaatttcaccatgattttctcaaatccataattttctcaaaatttgtt 28809944  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| || |||||||||||||| | |||| || ||||| |||||||||    
T  28809945 atatcc--aaaaaatatgtatttctagttaagaaccataccaaaagcagctaagaaattgtacc 28810006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 367 - 437
Target Start/End: Complemental strand, 4895113 - 4895042
Alignment:
Q  367 ttttcgtatggtt-cttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  4895113 ttttcgtatggtttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttatat 4895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 43486198 - 43486273
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaa 409  Q
    |||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  43486198 aaggagaaaacttaggtacaattccttaggtacttttcctatggttcttaactaaattcaccatgattttctcaaa 43486273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 349 - 435
Target Start/End: Original strand, 9355566 - 9355652
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||||||||| | |||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||| | ||||||||    
T  9355566 gtacaattccttaggtgcttttcatatggttcttaactaaattcaccatgatttccttaaatccataattttctcagaatttgttat 9355652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 56552198 - 56552132
Alignment:
Q  370 tcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  56552198 tcgtatggttcttaaataaattaaccatgatttcctcaaatccataattttctcaaagtttgttata 56552132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 438
Target Start/End: Complemental strand, 24294607 - 24294536
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||| | |||||||||||||||||||||||||    
T  24294607 ttttcgtatggttcttaactaaattcaccataatttcctcaaattcgtaattttctcaaagtttgttatatc 24294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 349 - 439
Target Start/End: Complemental strand, 2272524 - 2272434
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||||||| |||  | |||||||||||||||||| ||||||| |||||||||| || |||||||||||||| |||||||||||| |||||    
T  2272524 gtacaattcattatgtgcttttcgtatggttcttagctaaattcaccatgatttccttaaatccataattttatcaaagtttgttctatcc 2272434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 52824347 - 52824251
Alignment:
Q  399 attttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||| ||||||||||||||||||||||||||| |||||||         |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  52824347 atttcctcaaatccataattttctcaaagtttattatatc--taaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 52824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 16995585 - 16995656
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    ||||||||||||| |||| |||||| | ||||||||||||||| |||| ||||| ||| |||||||||||||    
T  16995585 ttttcgtatggtttttaattaaattcaacatgattttctcaaacccatcattttttcagagtttgttatatc 16995656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 437
Target Start/End: Original strand, 36030941 - 36031031
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||| ||| |||||||||||||  | ||||||||||| |||||||||||||| |||         |||||||||||||||||||||||||||||||||    
T  36030941 agaaaagttaggtacaattccttacgtgcttttcgtatgtttcttaactaaattcacc---------tcaaatccataattttctcaaagtttgttatat 36031031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 52824237 - 52824292
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  52824237 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 52824292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 530840 - 530787
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  530840 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 530787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 18417658 - 18417710
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  18417658 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 18417710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 1298910 - 1298965
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  1298910 aaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 1298965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 435
Target Start/End: Original strand, 19600944 - 19601039
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    ||||||||  |||||||| |||| || ||||  ||||||| |||| ||||||  |||||||||| | ||||||||||| || ||||||||||||||    
T  19600944 aaaatttagatacaattctttaggtaatttttatatggtttttaattaaattcgccatgattttgttaaatccataatattttcaaagtttgttat 19601039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 20435313 - 20435258
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| ||||||||| |||| | ||||||||||||||||||||||||    
T  20435313 aaggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaa 20435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 438
Target Start/End: Original strand, 52587383 - 52587417
Alignment:
Q  404 ctcaaatccataattttctcaaagtttgttatatc 438  Q
    |||||||||||||||||||||||||||||||||||    
T  52587383 ctcaaatccataattttctcaaagtttgttatatc 52587417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 24915847 - 24915806
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  24915847 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 24915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 24969715 - 24969662
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| | |||||||||| |||||||||||||    
T  24969715 ggagaaaacttaggtacaattccttaggtgcttttcgtatagttcttaactaaa 24969662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 27434728 - 27434768
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  27434728 tttagttaagaaccatacgaaaagcacctaaggaattgtac 27434768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 42274663 - 42274611
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||||||||| |  |||||||||||||||||||||||    
T  42274663 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 42274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 409
Target Start/End: Original strand, 11330104 - 11330179
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaa 409  Q
    |||||||||| |||  ||||||| ||||| | |||||| |||| ||||||||| ||  ||||||||||||||||||    
T  11330104 aaggagaaaacttagatacaatttcttagatgcttttcatatgattcttaactgaaaataccatgattttctcaaa 11330179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 32318893 - 32318838
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||||||||||||| |||| | |||||| |||| ||||||| ||||    
T  32318893 aaggagaaaatttaagtacaattctttaggtgcttttcatatgattcttaattaaa 32318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 515
Target Start/End: Complemental strand, 42274545 - 42274487
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttcttttt 515  Q
    |||||||||||||||| |||||| || ||||||||||||| |||||| ||||| ||||||    
T  42274545 tttagttaagaaccatacgaaaagcatctaaggaattgta-cctaagttttctccttttt 42274487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 13204376 - 13204430
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| |||  ||||||| ||||| ||||||| ||||||||||||||||||    
T  13204376 aggagaaaacttagatacaattacttaggtactttttgtatggttcttaactaaa 13204430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 23481952 - 23482022
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||| |||| |||||||| ||||||||  ||||| || | ||||| |||||||||||||| ||||||||||    
T  23481952 tttttgtatagttcttaattaaatttattatgatgtttttaaatctataattttctcaaaatttgttatat 23482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 47452840 - 47452910
Alignment:
Q  366 cttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    |||||| |||||||||||||| || |  ||||| ||| |||||||||| ||||||| | ||||||||||||    
T  47452840 cttttcatatggttcttaacttaactacccatgttttcctcaaatccacaattttcccgaagtttgttata 47452910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 530722 - 530681
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| | |||| ||||||||||||||||||    
T  530722 tttagttaagaaccatacaaaaagcacctaaggaattgtacc 530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 1299030 - 1299071
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||  ||||| ||||||||||||||||||    
T  1299030 tttagttaagaaccataagaaaagcacctaaggaattgtacc 1299071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 4688300 - 4688259
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  4688300 tttagttaagaaccatacgaaaagcacctaagaaattgtacc 4688259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 23928738 - 23928685
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| | |||| |||||| ||||||||||||    
T  23928738 ggagaaaacttatgtacaattccttaggtgctttgcgtatgattcttaactaaa 23928685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 24969594 - 24969553
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  24969594 tttagttaagaaccatacgaaaagcacctaaagaattgtacc 24969553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 32318773 - 32318732
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||| ||||||||||||||    
T  32318773 tttagttaagaaccatacgaaaagcacataaggaattgtacc 32318732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 55107524 - 55107577
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||  | |||||| |||||||||||||||||    
T  55107524 ggagaaaacttaggtacaattccttatgtgcttttcatatggttcttaactaaa 55107577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 4688418 - 4688366
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||||||||| |  |||||||||||||||||| ||||    
T  4688418 gagaaaacttaggtacaattccttagatgattttcgtatggttcttaattaaa 4688366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 9355606 - 9355566
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||||||||||||  ||||| |||||||||||||||||    
T  9355606 tttagttaagaaccatatgaaaagcacctaaggaattgtac 9355566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 28810019 - 28809967
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaacta 387  Q
    ||||||||| ||| |||||||| ||||| | ||||| ||||||||||||||||    
T  28810019 aggagaaaacttaggtacaatttcttagctgcttttggtatggttcttaacta 28809967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 55049453 - 55049413
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||||||||| || |||||| |||||||||||||||||    
T  55049453 tttagttaagaactatacgaaaagcacctaaggaattgtac 55049413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 6e-48; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 24101830 - 24101990
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  24101830 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatataccatgatttcctcaaatccataattttctcaaagtttgtt 24101929  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||        |||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  24101930 atatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtac 24101990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 336 - 497
Target Start/End: Complemental strand, 45408796 - 45408637
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45408796 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttat 45408697  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  45408696 atcc--aaaaaatatgtatttttagttaagaaccatacaaaaaacacctaaggaattgtacc 45408637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 1923978 - 1924140
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||| ||||| | |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  1923978 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgtt 1924077  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  1924078 atatcc-aaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 1924140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 336 - 518
Target Start/End: Complemental strand, 16705904 - 16705725
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||||||| |||||||||||||| | |||||||||||||| ||||||||||| || |||||||||||||| |||||||||| ||||||||||||||    
T  16705904 ggagaaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaattcactatgattttctcaaagccataattttatcaaagtttgttat 16705805  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttttata 518  Q
    ||||        |||||| ||||||||||||||||| |||||| |||||||||||||||| |||||| ||||| ||| |||||    
T  16705804 atcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta-cctaagttttctccttattata 16705725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 34490628 - 34490468
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||    
T  34490628 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgtta 34490529  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  34490528 tatcc--aaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtacc 34490468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 340 - 493
Target Start/End: Original strand, 12850546 - 12850697
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||| |||||||||||||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12850546 aaaatttaggtacaattccttaggtactttttgtatggtttttaactaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 12850645  T
Q  440 nnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattg 493  Q
            |||||| ||||||||||||||||| |||||| || || ||||||||    
T  12850646 --aaaaaatatgtatttttagttaagaaccatacgaaaagcatctgaggaattg 12850697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 3117049 - 3116888
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||| ||| | |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  3117049 aaggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgtt 3116950  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||| |||| || ||||||||||    
T  3116949 atatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtacc 3116888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 7737238 - 7737076
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  7737238 aaggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaatttaccatgatttcctcaaagccataattttctcaaagtttgtt 7737139  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||| ||| | |||| |||||||| |||||||||    
T  7737138 atatcc-aaaaaaatatgtatttttagttaagaatcataccaaaagcacctaagaaattgtacc 7737076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 327 - 497
Target Start/End: Original strand, 9933561 - 9933728
Alignment:
Q  327 tttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaa 426  Q
    |||||| |||||||||| ||| ||||||||| |||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9933561 tttttaaaaggagaaaacttaggtacaattcattagtg-cttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaa 9933659  T
Q  427 gtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||| |||||||         |||||| ||||||||||||||||| |||||| |||||||| |||||||||    
T  9933660 gtttattatatc--taaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacc 9933728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 42713775 - 42713937
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    ||||||||||||||  || |||||||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  42713775 aaggagaaaatttagatataattccttaggtgtttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttatt 42713874  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||| |||||||||| ||| |||| |||||||||    
T  42713875 atatcc-aaaaaaatatgtatttttagttaagaatcatgcgaaaagcacttaagaaattgtacc 42713937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 22269894 - 22269734
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||   | |||||||| |||||||||||||||||||||||||||||||    
T  22269894 aggagaaaacttacgtacaattccttagatgcttttcgtatggttcttaactaaaaaaaacatgatttcctcaaatccataattttctcaaagtttgtta 22269795  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| |||||||||| || ||| |||||||||||||||||||||||||    
T  22269794 tatcc--aaaaaatatgtatttttagttaaaaatcatacgaaaaacacctaaggaattgtacc 22269734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 336 - 497
Target Start/End: Complemental strand, 2818837 - 2818678
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| ||||||||| |||| |  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||    
T  2818837 ggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgatat 2818738  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||||||||||| ||| |||||| ||||||||||||||||||    
T  2818737 atcc--aaaaaatatgtatttttagttaagaatcatacgaaaagcacctaaggaattgtacc 2818678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 365 - 496
Target Start/End: Complemental strand, 23836019 - 23835889
Alignment:
Q  365 acttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaa 464  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||        |||||| ||||||||||    
T  23836019 acttttcgtatggtttttaacaaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaaatatgtatttttagttaa 23835921  T
Q  465 gaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||| |||||| |||||||||||||||||    
T  23835920 gaaccatacgaaaagcacctaaggaattgtac 23835889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 27920745 - 27920585
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||||||||  |||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  27920745 aaggagaaaacttaggtacaattttttagctgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttttcaaagtttgtt 27920646  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||        |||||| |||||||||||| |||| |||||| |||||||| ||||||||    
T  27920645 atatcc--aaaaaatatgtagttttagttaagacccatacgaaaagcacctaagaaattgtac 27920585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 9281347 - 9281506
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||  |||||||||||||| |||||||| ||||||||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||    
T  9281347 ggagaaaactttggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 9281446  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        ||| || ||||||||||||||||| ||||||  |||||||||||||||||    
T  9281447 atcc--aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 9281506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 335 - 496
Target Start/End: Complemental strand, 43476118 - 43475957
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||||||| ||| |||||||||| |  ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||    
T  43476118 aggagaaaatttaggtataattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttatta 43476019  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||        ||| || |||||||| | |||||| |||||| ||||| |||||||||||    
T  43476018 tatccaaaaaaaatatatatttttagtttaaaaccatacgaaaatcacctgaggaattgtac 43475957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 366 - 482
Target Start/End: Original strand, 9850788 - 9850901
Alignment:
Q  366 cttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaag 465  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||         |||||| |||||||||||    
T  9850788 cttttcgtatggttcttaactaaatttaccatgattttcttaaatccataattttctcaaaatttgttatatc---aaaaaatatgtatttttagttaag 9850884  T
Q  466 aaccatgcgaaaaacac 482  Q
    |||||| ||||||||||    
T  9850885 aaccatacgaaaaacac 9850901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 20893057 - 20892896
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||| |||||||||| | ||||||||||| ||||||||||||  ||| || ||||  |||||||||||||||||||||||||||||    
T  20893057 aaggagaaaactta-gtataattccttaggtgcttttcgtatgattcttaactaaaaatacaataatttcatcaaatccataattttctcaaagtttgtt 20892959  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||| |||||||| |||||||||    
T  20892958 atatcc-ataaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacc 20892896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 334 - 439
Target Start/End: Complemental strand, 6605907 - 6605803
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||||||||| |||| | ||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  6605907 aaggagaaaacttaggtacaattctttaggtgctttttgtatggttctta-ctaaatttaccatgatttcctcaaatgcataattttctcaaagtttgtt 6605809  T
Q  434 atatcc 439  Q
    ||||||    
T  6605808 atatcc 6605803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 338 - 497
Target Start/End: Complemental strand, 34456054 - 34455897
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||||||| |||||||| ||||  |  |||||||||||||| ||| |||||| | ||| |||| |||||||| |||||||||||||||||||||||||    
T  34456054 agaaaatttaggtacaatttcttatgtgtttttcgtatggttcctaattaaattcatcataatttcctcaaatctataattttctcaaagtttgttatat 34455955  T
Q  438 ccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||        |||||| ||||| ||||||||||| |||||| ||||||||||||||||||    
T  34455954 cc--aaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacc 34455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 367 - 437
Target Start/End: Complemental strand, 40362622 - 40362553
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||    
T  40362622 ttttcgtatggttcttaactaaattcaccatgattttctcaaat-cataattttctcatagtttgttatat 40362553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 349 - 439
Target Start/End: Complemental strand, 7116528 - 7116438
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||| ||||| |  |||||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||| ||||| |||||    
T  7116528 gtacaatttcttagatgtttttcgtatggttcttaaataaatttaccataatttcatcaaatccataattttctcaaagattgttctatcc 7116438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 43858607 - 43858550
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatt 391  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  43858607 aaggagaaaatttaggtacaattccttaggtacttttcgtatggttcttaactaaatt 43858550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 367 - 496
Target Start/End: Original strand, 29229394 - 29229522
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctc-aaagtttgttatatccnnnnnnnntatgtacttttagttaag 465  Q
    |||||||||| |||||||||| ||| | |||||||| |||||||||||||||||||| ||||||| ||||||||        |||||| |||||||||||    
T  29229394 ttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttattatatcc--aaaaaatatgtatttttagttaag 29229491  T
Q  466 aaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||| ||||||  | |||| |||||||||    
T  29229492 aaccatacgaaaagtaactaaagaattgtac 29229522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 367 - 496
Target Start/End: Original strand, 29342694 - 29342822
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctc-aaagtttgttatatccnnnnnnnntatgtacttttagttaag 465  Q
    |||||||||| |||||||||| ||| | |||||||| |||||||||||||||||||| ||||||| ||||||||        |||||| |||||||||||    
T  29342694 ttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttattatatcc--aaaaaatatgtatttttagttaag 29342791  T
Q  466 aaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||| ||||||  | |||| |||||||||    
T  29342792 aaccatacgaaaagtaactaaagaattgtac 29342822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 24102003 - 24101950
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  24102003 ggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaa 24101950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 39242997 - 39243086
Alignment:
Q  350 tacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||||| ||||| || |||||||||| |||||||||||||||| | ||||||  ||||||  || ||||| ||||||||||||||||||    
T  39242997 tacaatttcttaggtatttttcgtatgattcttaactaaatttatcgtgatttcatcaaatttatgattttatcaaagtttgttatatcc 39243086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 9933742 - 9933687
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||    
T  9933742 aaggagaaaatttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 9933687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 404
Target Start/End: Complemental strand, 10553051 - 10552984
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttc 404  Q
    ||||||| ||| |||||||||||||| |  |||||||||| |||||||||||||| ||||||||||||    
T  10553051 gagaaaacttaggtacaattccttaggtgtttttcgtatgattcttaactaaattcaccatgattttc 10552984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 16705731 - 16705786
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  16705731 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 16705786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 9281519 - 9281465
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  9281519 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 9281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 17500037 - 17500107
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    ||||||||||||||||||||||||| ||  | || ||||||||||| | ||||| ||||||||||||||||    
T  17500037 ttttcgtatggttcttaactaaattcacggtaatcttctcaaatcctttattttttcaaagtttgttatat 17500107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 23835875 - 23835929
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  23835875 aggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 23835929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 29229523 - 29229482
Alignment:
Q  348 agtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  29229523 agtacaattctttagttacttttcgtatggttcttaactaaa 29229482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 29342823 - 29342782
Alignment:
Q  348 agtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  29342823 agtacaattctttagttacttttcgtatggttcttaactaaa 29342782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 1924153 - 1924099
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| |  |||||||||||||||||||||||    
T  1924153 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 1924099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 409
Target Start/End: Original strand, 17434728 - 17434770
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaa 409  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  17434728 ttttcgtatggttcttaactaaattcaccataattttctcaaa 17434770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 20892883 - 20892937
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||| ||||| | ||||||||||||||||||||||||    
T  20892883 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 20892937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 24101885 - 24101828
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||| ||||| |||||    
T  24101885 tttagttaagaaccatacgaaaagcacctaaggaattgta-cctaagttttctcctttt 24101828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 497
Target Start/End: Original strand, 34490573 - 34490615
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  34490573 ttttagttaagaaccatacgaaaagcacctaaggaattgtacc 34490615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 2818784 - 2818825
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  2818784 tttagttaagaaccatacgaaaaacacctaaagaattgtacc 2818825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 10552999 - 10553040
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  10552999 tttagttaagaatcatacgaaaaacacctaaggaattgtacc 10553040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 34455885 - 34455938
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||| ||||    
T  34455885 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 34455938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 43476064 - 43476105
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  43476064 tttagttaagaaccatacgaaaaacacctaaggaattatacc 43476105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 492
Target Start/End: Complemental strand, 42713830 - 42713794
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaatt 492  Q
    |||||||||||||||| ||||||||||||||||||||    
T  42713830 tttagttaagaaccatacgaaaaacacctaaggaatt 42713794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 515
Target Start/End: Complemental strand, 1924033 - 1923975
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttcttttt 515  Q
    |||||||||||||||| |||||| |||||||| ||||||| |||||| ||||| ||||||    
T  1924033 tttagttaagaaccatacgaaaagcacctaagaaattgta-cctaagttttctccttttt 1923975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 45408623 - 45408678
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| |  |||| ||||||||||||||||||    
T  45408623 aaggagaaaacttaggtacaattccttaggtgttttttgtatggttcttaactaaa 45408678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 3116875 - 3116929
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| ||||||||| || | | ||||||||||||||||||||||||    
T  3116875 aggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 3116929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 34490455 - 34490509
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| ||||||||| |||| |  |||||||||||||||||||||||    
T  34490455 aggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaa 34490509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 7116374 - 7116423
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||| ||| ||||||||| |||| |||||||||||||||||| |||||||    
T  7116374 aaaacttaggtacaattctttagatacttttcgtatggttctcaactaaa 7116423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 7737183 - 7737224
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||| ||| |||||| ||||||||||||||||||    
T  7737183 tttagttaagaatcatacgaaaagcacctaaggaattgtacc 7737224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 12850713 - 12850660
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| || |||||||| || | ||||||||||||||||||||||||    
T  12850713 ggagaaaacttaggtccaattcctcagatgcttttcgtatggttcttaactaaa 12850660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 16705851 - 16705892
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||| |||||| |||||| ||||||||||||||||||    
T  16705851 tttagttaaaaaccatacgaaaagcacctaaggaattgtacc 16705892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 17434799 - 17434840
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||| ||| ||||||||| |||||||||||||||    
T  17434799 tttagttaagaatcatacgaaaaacatctaaggaattgtacc 17434840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 496
Target Start/End: Original strand, 22269839 - 22269880
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||||||||||||| |||||| || ||||||||||||||    
T  22269839 ttttagttaagaaccatacgaaaagcatctaaggaattgtac 22269880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 43858552 - 43858593
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| ||||||  |||||||||||||||||    
T  43858552 tttagttaagaaccatacgaaaagtacctaaggaattgtacc 43858593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 45408743 - 45408784
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||| ||||||||||| |||||| ||||||||||||||||||    
T  45408743 tttaattaagaaccatacgaaaagcacctaaggaattgtacc 45408784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 2818679 - 2818719
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  2818679 gtacaattccttaggtgcttttcgtatgattcttaactaaa 2818719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 439
Target Start/End: Original strand, 17434755 - 17434783
Alignment:
Q  411 ccataattttctcaaagtttgttatatcc 439  Q
    |||||||||||||||||||||||||||||    
T  17434755 ccataattttctcaaagtttgttatatcc 17434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 4e-46; HSPs: 104)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 21969155 - 21969316
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  21969155 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgtt 21969254  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  21969255 atatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 21969316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 21991591 - 21991752
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||    
T  21991591 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgtt 21991690  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  21991691 atatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 21991752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 4072272 - 4072433
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||| ||||| | |||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  4072272 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgtta 4072371  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  4072372 tatcc-aaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 4072433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 337 - 497
Target Start/End: Complemental strand, 10254739 - 10254580
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  10254739 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgattttctcaaatccataattttttcaaagtttgttata 10254640  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||        |||||| |||||||||||||||||  ||||| ||||||||||||||||||    
T  10254639 tcc-aaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacc 10254580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 338 - 497
Target Start/End: Original strand, 32237396 - 32237553
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||| ||| |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32237396 agaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaatttaccatgattttctcagatccataattttctcaaagtttgttatat 32237495  T
Q  438 ccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||        |||||| ||||| ||||||||||| |||||| ||||||||||||||||||    
T  32237496 cc--aaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacc 32237553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 45487971 - 45487811
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||    
T  45487971 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgtta 45487872  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  45487871 tatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 45487811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 25446422 - 25446263
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  25446422 aaggagaaaactta-gtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 25446324  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||        |||||| ||||||||||||||||| |||||| || ||||||||||||||    
T  25446323 atatcc-aaaaaaatatgtatttttagttaagaaccatacgaaaagca-ctaaggaattgtac 25446263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 26906626 - 26906466
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| || ||||||| ||||||| |||||||||||||||||||||||    
T  26906626 aggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgtta 26906527  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        ||| || ||||||||||||||||| ||||||  |||||||||||||||||    
T  26906526 tatcc--aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 26906466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 36278755 - 36278915
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| || ||||||| ||||||| |||||||||||||||||||||||    
T  36278755 aggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgtta 36278854  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        ||| || ||||||||||||||||| ||||||  |||||||||||||||||    
T  36278855 tatcc--aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 36278915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 517
Target Start/End: Original strand, 10441256 - 10441436
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| |||||||||||||||||| | ||||| ||||| ||||||||||||  || |||||||| ||||||||||||||||||||||||||||||    
T  10441256 aaggagaaaacttaagtacaattccttaggtgcttttggtatgattcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtt 10441355  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttttat 517  Q
    ||||||        |||||| ||||||||||||||| | | |||| |||||||||||||||| |||||| ||||| ||||||||    
T  10441356 atatcc--aaaaaatatgtatttttagttaagaaccgtaccaaaagcacctaaggaattgta-cctaagttttctcctttttat 10441436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 25561184 - 25561023
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||  |||||||||||||||||| | |||||||||| ||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||||    
T  25561184 aaggagaaatcttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgtt 25561085  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| | |||| ||||||||||||||||||    
T  25561084 atatcc--aaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 25561023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 36657432 - 36657592
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  || |||||||| |||||||||||||||||||||||||||||||    
T  36657432 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtta 36657531  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||         |||||| ||||||||||||||||| |||||| || |||||||||||||||    
T  36657532 tatc--aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 36657592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 50099607 - 50099445
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| ||||| |||| ||||||| ||||||||||||||||||||||    
T  50099607 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgtt 50099508  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||        |||||| ||||| |||| |||||| |||||| ||||||| |||||||||    
T  50099507 atatccaaaaaaaatatgtatttttaattaaaaaccatacgaaaagcacctaacgaattgtac 50099445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 3970490 - 3970650
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| || ||||||||||| | |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||    
T  3970490 aggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgtta 3970589  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| ||||||||||||||||| ||||||  ||||||| |||||||||    
T  3970590 tatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagtacctaagaaattgtacc 3970650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 36822759 - 36822919
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||    
T  36822759 aggagaaaacttaggtacaattccttagctgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgtta 36822858  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| ||||||||||||||||| |||||| |||||||  |||||||||    
T  36822859 tatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaaaaattgtacc 36822919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 25488341 - 25488500
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||  |||||||||||||||||| | |||||||||| ||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||||||    
T  25488341 ggagaaatcttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttat 25488440  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||||||||||||||| | |||| ||||||||||||||||||    
T  25488441 atcc--aaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 25488500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 334 - 495
Target Start/End: Original strand, 55340291 - 55340451
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||||||| |||||||| ||||  |  |||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  55340291 aaggagaaaatttaggtacaatttcttatgtgtttttcgtatgattcttaactatattcaccatgattttctcaaatccataattttctcaaagtttgtt 55340390  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    ||||||        |||||| |||||||||||||||||  |||||| |||||||||||||||    
T  55340391 atatcc-aaaaaaatatgtatttttagttaagaaccatatgaaaaatacctaaggaattgta 55340451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 337 - 497
Target Start/End: Complemental strand, 8831911 - 8831752
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| ||| ||||||||  |||| | |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  8831911 gagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcaaatccataattttctcaaagtttgttata 8831812  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||        |||||| |||||||| |||||||| |||||| ||||||||||||||||||    
T  8831811 tcc-aaaaaaatatgtatttttagtttagaaccatacgaaaagcacctaaggaattgtacc 8831752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 10117684 - 10117527
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| |     |||||||||||||||||||||||||||||||||||    
T  10117684 aaggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca-----attttctcaaatccataattttctcaaagtttgtt 10117590  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| |||||||||||||||||  ||||| ||||||||||| ||||||    
T  10117589 atatcc-aaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaactgtacc 10117527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 12789779 - 12789618
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||  ||| |||||||||| | ||||| ||||||||||||| |||||| |||||||||| ||||||| ||||||||| ||||||||||||    
T  12789779 aaggagaaaactttggtagaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaattcataattttttcaaagtttgtt 12789680  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  12789679 atatcc--aaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 12789618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 338 - 513
Target Start/End: Complemental strand, 12838246 - 12838074
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||| ||| ||||||||| |||| |  ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  12838246 agaaaacttatgtacaattctttaggtgtttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 12838147  T
Q  438 ccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttcttt 513  Q
    ||        |||||| ||||||||||||||||| | |||| |||||||||||||||| | |||| ||||||||||    
T  12838146 cc--aaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta-cataagttttcttcttt 12838074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 13078163 - 13078322
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| || ||||||||||| | |||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  13078163 ggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 13078262  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||||||||||| ||| ||||||  ||||||| |||||||||    
T  13078263 atcc--aaaaaatatgtatttttagttaagaatcatacgaaaagtacctaagaaattgtacc 13078322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 337 - 497
Target Start/End: Complemental strand, 10017279 - 10017126
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||     || | |||||||||||||||||||||||||| |||||||||||||||    
T  10017279 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaa-----ttcatcatgattttctcaaatccataattttttcaaagtttgttata 10017185  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||        |||||| |||||||||||||||||  ||||| ||||||||||||||||||    
T  10017184 tcc--aaaaaatatgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacc 10017126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 39850342 - 39850504
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctca-aagtttgt 432  Q
    |||||||||| ||| |||| ||||||||| |  |||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||||    
T  39850342 aaggagaaaacttaggtactattccttaggtgtttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcacaagtttgt 39850441  T
Q  433 tatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||        ||| || ||||||||||||| ||| |||||| ||||||||||||||||||    
T  39850442 tatatcc--aaaaaatatatatttttagttaagaatcatacgaaaagcacctaaggaattgtacc 39850504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 334 - 510
Target Start/End: Original strand, 43639079 - 43639253
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| |||  || |||||||||| | ||||||||||| |||||||| ||||| ||||||||||  |||||||||||||||||||||||||||||    
T  43639079 aaggagaaaacttagttataattccttaggtgcttttcgtatgattcttaaccaaattcaccatgatttcttcaaatccataattttctcaaagtttgtt 43639178  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttc 510  Q
    ||||||        ||| || ||||||||||||| ||| |||||| |||||||||||||||| |||||| |||||||    
T  43639179 atatcc-aaaaaaatatatatttttagttaagaatcatacgaaaagcacctaaggaattgta-cctaagttttcttc 43639253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 44611380 - 44611540
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||    
T  44611380 aaggagaaaactta-gtacaattccttaggtactttttgtatagttcttaactaaattcaccatgatttcttcaaattcataattttctcaaagtttgtt 44611478  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||         ||| || |||||||||| |||||| | |||||||||||||||||||||||    
T  44611479 atatc--aaaaaaatatatatttttagttaaaaaccatacaaaaaacacctaaggaattgtacc 44611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 336 - 478
Target Start/End: Complemental strand, 22101336 - 22101195
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||    |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  22101336 ggagaaaacttaggtacaattccttatgagcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttat 22101237  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaa 478  Q
    ||||        |||||| ||||||||||||||||| ||||||    
T  22101236 atcc-aacaaaatatgtatttttagttaagaaccatacgaaaa 22101195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 35368905 - 35368801
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||| ||||  |  ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35368905 aggagaaaacttaggtacaatttcttatgtgtttttcgtatggtttttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgtta 35368806  T
Q  435 tatcc 439  Q
    |||||    
T  35368805 tatcc 35368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 336 - 478
Target Start/End: Complemental strand, 22176280 - 22176139
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||  | ||||| |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||    
T  22176280 ggagaaaacttaggtacaattccttatgtgctttttgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgtaat 22176181  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaa 478  Q
    ||||        |||||| ||||||||||||||||| ||||||    
T  22176180 atcc-aacaaaatatgtatttttagttaagaaccatacgaaaa 22176139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 338 - 439
Target Start/End: Original strand, 44920649 - 44920749
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    ||||||||||| ||||||||||||||  |||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||    
T  44920649 agaaaatttaaatacaattccttagtg-cttttcttatggttcttaactaaatttacaatgattttctcaaatttataattttctcaaagtttattatat 44920747  T
Q  438 cc 439  Q
    ||    
T  44920748 cc 44920749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 26976840 - 26977001
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||| ||||| | |||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||| ||    
T  26976840 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagtttatt 26976939  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
     ||||         ||  || |||||||||| |||||| |||||||||||||| ||||||||||    
T  26976940 gtatcgtaaaaagata--tatttttagttaaaaaccatacgaaaaacacctaaagaattgtacc 26977001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 45712903 - 45713062
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | |||||  | |  |||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||    
T  45712903 ggagaaaacttaggtacaattccttaggtgctttttttttttttcttaactaaattcaccatgatttcctcaaagccataattttatcaaagtttgttat 45713002  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| |||||||| |||||||| |||||| ||||||||||||||||||    
T  45713003 atcc--aaaaaatatgtatttttagtttagaaccatacgaaaagcacctaaggaattgtacc 45713062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 335 - 430
Target Start/End: Complemental strand, 26977862 - 26977767
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagttt 430  Q
    ||||||||| ||| |||||||| ||||| |||||||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  26977862 aggagaaaacttaggtacaatttcttagatacttttcatatggttcttaactaaatttagtatgatttcctcaaatccataattttctcaaagttt 26977767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 321 - 439
Target Start/End: Complemental strand, 46679447 - 46679329
Alignment:
Q  321 aaggattttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataatttt 420  Q
    ||||| || ||| |||||||||| |||||||||||||||| | | |||||  || |||||||||||||||| ||||| |||| |||||||||||||||||    
T  46679447 aaggaattattaaaaggagaaaacttaagtacaattccttggatgctttttatacggttcttaactaaattcaccataatttcctcaaatccataatttt 46679348  T
Q  421 ctcaaagtttgttatatcc 439  Q
    |||||||||||||| ||||    
T  46679347 ctcaaagtttgttaaatcc 46679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 340 - 497
Target Start/End: Complemental strand, 5530059 - 5529903
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||| |||||||| ||||  | |||||||||||||| |||||||||  |||||||||||  | ||||| ||||||||||||||||||| |||||||    
T  5530059 aaaatttaggtacaatttcttaagtgcttttcgtatggttattaactaaaaataccatgatttctttaaatctataattttctcaaagtttgatatatcc 5529960  T
Q  440 nnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
            |||||| ||||||||||||||||| |||||| |||||||| |||||||||    
T  5529959 -aaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacc 5529903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 337 - 514
Target Start/End: Original strand, 13723989 - 13724163
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| ||| |||||||| ||||| | ||||| |||||||||||| ||||||| ||||||||||  |||||| |||||||||||||||||||||||||    
T  13723989 gagaaaacttaggtacaatttcttaggtgctttttgtatggttctta-ctaaattcaccatgatttcttcaaattcataattttctcaaagtttgttata 13724087  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    |||        |||||| |||||||||| ||  || ||||||||| ||||||||||||| |||||| ||||| |||||    
T  13724088 tcc-aaaaaaatatgtatttttagttaaaaattatacgaaaaacatctaaggaattgta-cctaagatttctcctttt 13724163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 348 - 439
Target Start/End: Complemental strand, 404204 - 404113
Alignment:
Q  348 agtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||||| |||| | |||| ||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||||||||||||||    
T  404204 agtacaattctttagatgctttccgtatggttcttaactaaattcaccatgatttcctcaagtctataattttctcaaagtttgttatatcc 404113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 328 - 435
Target Start/End: Original strand, 42105375 - 42105482
Alignment:
Q  328 ttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaag 427  Q
    ||||| ||||| |||| ||| |||||||| | ||| |||||||| ||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||||    
T  42105375 ttttaaaaggaaaaaacttaggtacaatttcataggtacttttcttatggttcttaactaaattcaccgtgattttcttaaatccataattctctcaaag 42105474  T
Q  428 tttgttat 435  Q
    ||||||||    
T  42105475 tttgttat 42105482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 43150619 - 43150496
Alignment:
Q  368 tttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaagaa 467  Q
    ||||||||| |||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||        |||||| |||||||||| ||    
T  43150619 tttcgtatgattcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatcc--aaaaaatatgtatttttagttaaaaa 43150522  T
Q  468 ccatgcgaaaaacacctaaggaattg 493  Q
    |||| |||||| ||||| ||||||||    
T  43150521 ccatacgaaaagcacctgaggaattg 43150496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 373 - 496
Target Start/End: Original strand, 37506164 - 37506284
Alignment:
Q  373 tatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaagaaccatg 472  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| |||         ||||| ||||||||||||||||      
T  37506164 tatggttcttaactaaatttac-atgattttcttaaattcataattttctcaaagtttgttatctccaaaaaaa--atgtatttttagttaagaaccaca 37506260  T
Q  473 cgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||| |||||||||    
T  37506261 cgaaaaacacctaaagaattgtac 37506284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 340 - 497
Target Start/End: Original strand, 1476555 - 1476710
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||| ||| |||||||||||||| | ||||| |||||||||| | ||||||| |||||||||| || |||||||||||| |||||||||||||||| ||     
T  1476555 aaaacttaggtacaattccttaggtgcttttggtatggttctaacctaaattcaccatgatttccttaaatccataattctctcaaagtttgttatctct 1476654  T
Q  440 nnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
              |||| |||||||||||||||||  ||||| ||||||||||||||||||    
T  1476655 aaaaaaat--tgtatttttagttaagaaccatatgaaaagcacctaaggaattgtacc 1476710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 340 - 437
Target Start/End: Original strand, 297541 - 297638
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||| ||| |||||||||||| | | |||||||||||||||||| |||||||||| |  ||||||| |||||||||||||||||| ||||||||||||    
T  297541 aaaacttaggtacaattcctttggtgcttttcgtatggttcttagctaaatttactacaattttctgaaatccataattttctcatagtttgttatat 297638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 335 - 495
Target Start/End: Original strand, 36329187 - 36329337
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||| ||||| ||||||| |||| |||||||| ||||||         || |||||||||||||||||||||||||||||||    
T  36329187 aggagaaaacttaggtacaatttcttagatactttttgtattgttcttaaataaattc--------ttcctcaaatccataattttctcaaagtttgtta 36329278  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    |||||        |||||| ||||||||||||||||| |||||| ||||||| ||||||||    
T  36329279 tatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaagaattgta 36329337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 157008 - 157069
Alignment:
Q  376 ggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  157008 ggttcttaactaaatttatcataatttcctcaaatccataattttctcaaagtttgttatat 157069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 49984079 - 49984001
Alignment:
Q  359 ttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||| ||||||||||| | |||||||||||||| ||||||||||||| |||||||||||||| ||||| ||| ||||||    
T  49984079 ttaggtacttttcgtacgattcttaactaaattcaccatgattttcttaaatccataattttttcaaaatttattatat 49984001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 38125242 - 38125338
Alignment:
Q  399 attttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||| |||||||||||||||| |||||||||||||| |        |||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  38125242 attttcttaaatccataattttcttaaagtttgttatatacaaaaaa--tatgtatttttagttaagaaccatacgaaaaacacctaatgaattgtacc 38125338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 497
Target Start/End: Complemental strand, 46664356 - 46664188
Alignment:
Q  326 ttttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaa 425  Q
    ||||||| ||||||||| || | ||||||||| |||| | ||||||||||| || ||||  |||  || ||| |||| ||||||| ||||||||||||||    
T  46664356 ttttttaaaaggagaaactt-atgtacaattctttaggtgcttttcgtatgatttttaataaaaaatatcataatttcctcaaattcataattttctcaa 46664258  T
Q  426 agtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||          |||||| |||||||||||||| || ||||||| ||||||| |||||||||    
T  46664257 agtttgttatat--taaaaaaatatgtatttttagttaagaactatacgaaaaatacctaagaaattgtacc 46664188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 439
Target Start/End: Complemental strand, 32363188 - 32363122
Alignment:
Q  373 tatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||||| |||||||||||||| || |||||||||||||||||||||| | ||| ||||||||||||    
T  32363188 tatggttattaactaaatttacaataattttctcaaatccataattttttaaaaatttgttatatcc 32363122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 46222042 - 46222124
Alignment:
Q  350 tacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgt 432  Q
    ||||||| ||||| |  ||||||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||  |||||||    
T  46222042 tacaatttcttaggtgtttttcgtatggtttttaactaaattcaccatgattttcttaaattcataattttctcttagtttgt 46222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 37537022 - 37536941
Alignment:
Q  355 ttccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    |||||||  ||||||| ||||||||||||||||||||    || |||| ||| |||||||||||||||||||||||||||||    
T  37537022 ttccttaaatactttttgtatggttcttaactaaattatttataatttcctctaatccataattttctcaaagtttgttata 37536941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 39677312 - 39677373
Alignment:
Q  374 atggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    ||||||||||| |||||| || ||||||||||||||| ||||||||| ||||||||||||||    
T  39677312 atggttcttaattaaattcactatgattttctcaaattcataattttttcaaagtttgttat 39677373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 3970664 - 3970609
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||    
T  3970664 aaggagaaaacttaggtacaatttcttaggtacttttcgtatggttcttaactaaa 3970609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 36657606 - 36657551
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  36657606 aaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 36657551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 45487797 - 45487852
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  45487797 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 45487852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 21969329 - 21969275
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  21969329 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21969275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 21991765 - 21991711
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  21991765 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21991711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 26906453 - 26906507
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  26906453 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 26906507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 32237447 - 32237406
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  32237447 tttagttaagaaccatacgaaaaacacctaaggaattgtacc 32237406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 36278927 - 36278874
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  36278927 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 36278874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 4072447 - 4072392
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| |  |||||||||||||||||||||||    
T  4072447 aaggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4072392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 12789604 - 12789659
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| |  |||||||||||||||||||||||    
T  12789604 aaggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 12789659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 448 - 495
Target Start/End: Complemental strand, 32362922 - 32362875
Alignment:
Q  448 tatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  32362922 tatgtatttttagttaagaaccatacgaaaaacacctaaagaattgta 32362875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 35368547 - 35368602
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||  | ||||||||||||||||||||||||    
T  35368547 aaggagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaa 35368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 46664174 - 46664229
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| |||||||| ||||| || ||||||||| |||||||||||||    
T  46664174 aaggagaaaatttaggtacaatttcttaggtatttttcgtatagttcttaactaaa 46664229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 21969210 - 21969153
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||| ||||| |||||    
T  21969210 tttagttaagaaccatacgaaaagcacctaaggaattgta-cctaagttttctcctttt 21969153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 21991646 - 21991589
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||| ||||| |||||    
T  21991646 tttagttaagaaccatacgaaaagcacctaaggaattgta-cctaagttttctcctttt 21991589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 25488513 - 25488459
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  25488513 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25488459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 25561010 - 25561064
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  25561010 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25561064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 32237566 - 32237512
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||| ||||    
T  32237566 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 32237512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 455 - 497
Target Start/End: Complemental strand, 39850398 - 39850356
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  39850398 ttttagttaagaaccatacgaaaaacacctaaggaatagtacc 39850356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 39850517 - 39850463
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||| ||||||||||||    
T  39850517 aggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 39850463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 10117629 - 10117670
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  10117629 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 10117670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 10254687 - 10254728
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  10254687 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 10254728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 13078334 - 13078281
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||| ||||| ||||||||||||| ||||||||||||    
T  13078334 ggagaaaacttaggtacaatttcttaggtacttttcgtatgattcttaactaaa 13078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 45487917 - 45487958
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  45487917 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 45487958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 50099552 - 50099593
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  50099552 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 50099593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 438
Target Start/End: Complemental strand, 4567322 - 4567250
Alignment:
Q  366 cttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    |||||||||||||||||| ||||||| | || | ||| ||||||| |||  ||||||||| ||||||||||||    
T  4567322 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 4567250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 5529892 - 5529944
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||| ||||| | ||||||||||||||||||||||||    
T  5529892 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 5529944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 10017115 - 10017167
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||||||||| | |||||| |||||||||||||||||    
T  10017115 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10017167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 10254569 - 10254621
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||||||||| | |||||| |||||||||||||||||    
T  10254569 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 12838067 - 12838130
Alignment:
Q  325 attttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  12838067 atttttta-aagaagaaaacttatgtacaattccttaggtgctttttgtatggttcttaactaaa 12838130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 25446368 - 25446408
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  25446368 tttagttaagaaccatacgaaaagcacctaaggaattgtac 25446408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 1476724 - 1476669
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||| |||| ||| |||||||||||||| | |||||| |||||||||||||||||    
T  1476724 aaggataaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 1476669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 10441431 - 10441376
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||| ||| ||||||||||||||    
T  10441431 aaggagaaaacttaggtacaattccttaggtgcttttggtacggttcttaactaaa 10441376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 515
Target Start/End: Original strand, 12838195 - 12838253
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttcttttt 515  Q
    ||||||||| |||||| |||||||||||||| |||||||| | |||| ||||||||||||    
T  12838195 tttagttaaaaaccatacgaaaaacacctaaagaattgta-cataagttttcttcttttt 12838253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 514
Target Start/End: Complemental strand, 35368603 - 35368545
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    ||||||||||||||||| |||||| ||| |||||||||||| |||||| ||||| |||||    
T  35368603 ttttagttaagaaccatacgaaaagcacataaggaattgta-cctaagttttctcctttt 35368545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 43639251 - 43639200
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||| ||| |||||||||||||| | ||||||||||| ||||||||||||    
T  43639251 agaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 43639200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 25446250 - 25446302
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||    
T  25446250 aggagaaaactta-gtacaattccttagtg-cttttcgtatggttcttaactaaa 25446302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 497
Target Start/End: Complemental strand, 36657487 - 36657445
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  36657487 ttttagttaagaaccatacgaaaagcatctaaggaattgtacc 36657445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 497
Target Start/End: Complemental strand, 36822814 - 36822772
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  36822814 ttttagttaagaaccatacgaaaagcagctaaggaattgtacc 36822772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 38125351 - 38125297
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| ||||||||| |||| |  |||||||||||||||||||||||    
T  38125351 aggagaaaacttaggtacaattcattaggtgtttttcgtatggttcttaactaaa 38125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 45713071 - 45713021
Alignment:
Q  339 gaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||| ||| |||||||||||||| | |||||||||||||||| |||||||    
T  45713071 gaaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 45713021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 3970544 - 3970507
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattg 493  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  3970544 tttagttaagaaccatacgaaaagcacctaaggaattg 3970507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 4072326 - 4072285
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  4072326 tttagttaagaaccatacgaaaagcacctaagaaattgtacc 4072285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 8831744 - 8831793
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||| ||| |||||||||||||| | |||||||||||||||| |||||||    
T  8831744 aaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 8831793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 13078216 - 13078179
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattg 493  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  13078216 tttagttaagaaccatacgaaaagcacctaaggaattg 13078179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 32362861 - 32362914
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| |||| |||||||| |||| |  |||||||||||||||||||||||    
T  32362861 ggagaaaacttaactacaattctttaggtgtttttcgtatggttcttaactaaa 32362914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 36822931 - 36822878
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| ||||||||  |||| | ||||||||||||||||||||||||    
T  36822931 ggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 36822878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 434
Target Start/End: Original strand, 51579004 - 51579065
Alignment:
Q  373 tatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||||||||||| |   ||| |||||||||||||||||||||| |  ||||||||||    
T  51579004 tatggttcttaactaaactatacataattttctcaaatccataatttttttgaagtttgtta 51579065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 55340465 - 55340412
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| |||  ||||||||||||| || ||||| |||||||||||||||||    
T  55340465 ggagaaaacttagatacaattccttaggtatttttcatatggttcttaactaaa 55340412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 497
Target Start/End: Original strand, 10017232 - 10017268
Alignment:
Q  461 ttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  10017232 ttaagaaccatacgaaaagcacctaaggaattgtacc 10017268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 10117516 - 10117568
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| ||||| |||||||| | |||||| |||||||||||||||||    
T  10117516 gagaaaacttaggtacagttccttaggtgcttttcatatggttcttaactaaa 10117568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 25488394 - 25488354
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||||||||| || |||||| |||||||||||||||||    
T  25488394 tttagttaagaactatacgaaaagcacctaaggaattgtac 25488354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 25561129 - 25561169
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||||||||| || |||||| |||||||||||||||||    
T  25561129 tttagttaagaactatacgaaaagcacctaaggaattgtac 25561169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 4e-46; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 338 - 497
Target Start/End: Complemental strand, 5189638 - 5189481
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||    
T  5189638 agaaaatttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatat 5189539  T
Q  438 ccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||        |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  5189538 cc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 5189481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 47940568 - 47940730
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||| ||||| | |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  47940568 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgtt 47940667  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  47940668 atatcc-aaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 47940730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 338 - 497
Target Start/End: Original strand, 14387017 - 14387174
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||| ||| |||||||||||||| | | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||    
T  14387017 agaaaacttaggtacaattccttagatgcatttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatat 14387116  T
Q  438 ccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||        |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  14387117 cc--aaaaaatatgtatttttagttaagaaccatacgaaaaacacctaaggaattgtacc 14387174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 27240923 - 27241083
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27240923 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgtta 27241022  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        ||| || ||||||||||||||||| || ||| ||||||| ||||||||||    
T  27241023 tatcc--aaaaaatatatatttttagttaagaaccatacgcaaagcacctaacgaattgtacc 27241083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 9978051 - 9978211
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||||||| |||||||||||||  | ||||||||||| |||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  9978051 ggagaaaatttaggtacaattccttatgtgcttttcgtatgattcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttat 9978150  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  9978151 atcc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 9978211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 2854530 - 2854691
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||    
T  2854530 aaggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgtt 2854629  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        ||| || ||||||||||||||||| ||||||  |||||||||||||||||    
T  2854630 atatcc--aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 2854691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 338 - 497
Target Start/End: Complemental strand, 15324796 - 15324638
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||||||| |||||||||||||  | |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||    
T  15324796 agaaaatttatgtacaattccttatgtgcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatat 15324697  T
Q  438 ccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||        |||||| ||||||||||||||||| |||||| |||||||| |||||||||    
T  15324696 cc-aaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacc 15324638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 23698500 - 23698661
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||    
T  23698500 aaggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgtt 23698599  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        ||| || ||||||||||||||||| ||||||  |||||||||||||||||    
T  23698600 atatcc--aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 23698661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 335 - 514
Target Start/End: Original strand, 42561294 - 42561470
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||  |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||    
T  42561294 aggagaaatcttaagtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgtta 42561393  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    |||||        |||||| ||||||||||||||||| | |||| |||||||||||||||| |||||| ||||| |||||    
T  42561394 tatcc--aaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta-cctaagttttctcctttt 42561470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 19954909 - 19955070
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||  | |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  19954909 aaggagaaaacttaggtacaattccttatgtgcttttcgtatagttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 19955008  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| | ||||  |||||||||||||||||    
T  19955009 atatcc--aaaaaatatgtatttttagttaagaaccatacaaaaagtacctaaggaattgtacc 19955070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 48954212 - 48954373
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||    
T  48954212 aaggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgtt 48954311  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        ||| || ||||||||||||||||| ||||||  |||||||||||||||||    
T  48954312 atatcc--aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgtacc 48954373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 50627304 - 50627143
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||  | ||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||||    
T  50627304 aaggagaaaacttaggtacaattccttatatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtt 50627205  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||| || |||||||||||||||    
T  50627204 atatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 50627143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 358 - 497
Target Start/End: Original strand, 4299414 - 4299554
Alignment:
Q  358 cttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc-nnnnnnnntatgtactt 456  Q
    ||||| |||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||         |||||| ||    
T  4299414 cttaggtacttttcgtatggctcttaactaaattcaccattatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaaatatgtattt 4299513  T
Q  457 ttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  4299514 ttagttaagaaccatacgaaaaacacctaaggaattgtacc 4299554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 337 - 497
Target Start/End: Original strand, 3607730 - 3607888
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||||| ||| |||| ||||| | ||||| |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  3607730 gagaaaatttaggtagaatttcttaggtgctttttgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttata 3607829  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||        |||||| ||||||||||||||||| |||||| |||||||| |||||||||    
T  3607830 tcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagaaattgtacc 3607888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 337 - 497
Target Start/End: Original strand, 19796982 - 19797140
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| ||| |||||||| ||||| | |||||||||||||| |||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||    
T  19796982 gagaaaacttaggtacaatttcttaggtgcttttcgtatggtttttaactaaaaataccatgatttcctcaaatccataattttttcaaagtttgttata 19797081  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||        |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  19797082 tcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 19797140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 337 - 495
Target Start/End: Complemental strand, 1387948 - 1387793
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||    
T  1387948 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaagataccatgatttcctcaaattcataattttctcaaagtttattata 1387849  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    |||        |||||| ||||||||||||||||| |||||| || |||||||||||||    
T  1387848 tcc--aaaaaatatgtatttttagttaagaaccatacgaaaagca-ctaaggaattgta 1387793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 50162537 - 50162698
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| || |||| |||||||| |||| |||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  50162537 aggagaaaacttaggtacaattccttaggtattttttgtatggtttttaattaaattcaccgtgattttctcaaatctataattttctcaaagtttgtta 50162636  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| ||||||||||||||||| | |||| ||||||||||||||||||    
T  50162637 tatcc-aaaaaaatatgtaattttagttaagaaccatacaaaaagcacctaaggaattgtacc 50162698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 336 - 496
Target Start/End: Original strand, 27926251 - 27926410
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| ||| |||||||||  | |||||||||||||||||||||||||| ||  |||||| ||| ||||||||||||||||||||||||||||    
T  27926251 ggagaaaacttaggtataattccttatgtgcttttcgtatggttcttaactaaattcactgtgatttcctc-aatccataattttctcaaagtttgttat 27926349  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||        |||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  27926350 atccaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtac 27926410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 335 - 495
Target Start/End: Complemental strand, 40647290 - 40647130
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | ||||||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  40647290 aggagaaaacttaggtacaattccttaggtgcttttcgtatgatttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 40647191  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    |||          |||||| ||||||||||||||||  |||||| || |||||||||||||    
T  40647190 tataaaaaaaaaatatgtatttttagttaagaaccacacgaaaagcagctaaggaattgta 40647130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 366 - 497
Target Start/End: Complemental strand, 6079525 - 6079396
Alignment:
Q  366 cttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaag 465  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||        |||||| ||||||| |||    
T  6079525 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc--aaaaaatatgtatttttagtgaag 6079428  T
Q  466 aaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||| | ||||||||| |||||||||||||||    
T  6079427 aaccgtacgaaaaacatctaaggaattgtacc 6079396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 335 - 434
Target Start/End: Complemental strand, 36880683 - 36880584
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  36880683 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcaaagtttgtta 36880584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 350 - 496
Target Start/End: Original strand, 27928312 - 27928456
Alignment:
Q  350 tacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnnta 449  Q
    ||||||||||||  | ||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||||||        ||    
T  27928312 tacaattccttatgtgctttttgtatggttcttaactaaattcactgtgatttcctcaa-tccataattttctcaaagtttgttatatcc-aaaaaaata 27928409  T
Q  450 tgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  27928410 tgtatttttagttaagaaccatacgaaaaacacctaaggaattgtac 27928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 334 - 487
Target Start/End: Complemental strand, 26208598 - 26208446
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||| |||||||||| | |||||||||||||||| ||||||||| ||||| ||||  |||||||||||||||||||||||||||||    
T  26208598 aaggagaaaacttatgtataattccttaggtgcttttcgtatggttctgaactaaattcaccataatttcttcaaatccataattttctcaaagtttgtt 26208499  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaag 487  Q
    ||||||        |||||| |||||||| |||||||| |||||| ||||||||    
T  26208498 atatcc-aaaaaaatatgtatttttagttgagaaccatacgaaaagcacctaag 26208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 334 - 495
Target Start/End: Complemental strand, 21930551 - 21930394
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||||||| |||||||| ||||| |  ||||||||||||||||||||||||| |||||   |||   |||||||||||||||| ||||||||||    
T  21930551 aaggagaaaatttaggtacaattacttaggtgtttttcgtatggttcttaactaaattcaccatttcttt---aaatccataattttcttaaagtttgtt 21930455  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    ||||||        |||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  21930454 atatcc-aaaaaaatatgtatttttagttaagaaccatacgaaaaacaactaaggaattgta 21930394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 2125070 - 2125229
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    ||||||||||||  ||||||| ||||  | |||||||||||||||||||||||||| ||||||||||| | ||||  |||||||||||||||||||||||    
T  2125070 ggagaaaatttagttacaatttcttatgtgcttttcgtatggttcttaactaaattcaccatgatttttttaaatttataattttctcaaagtttgttat 2125169  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||         |||||| |||||||||||||| || |||||| |||||||| |||||||||    
T  2125170 atc--aaaaaaatatgtatttttagttaagaactatacgaaaagcacctaagaaattgtacc 2125229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 957746 - 957658
Alignment:
Q  350 tacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    ||||||| ||||| |  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  957746 tacaatttcttaggtgtttttcgtatgattcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatc 957658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 49284293 - 49284397
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    |||| |||| ||| |||||||| |||||||  |||| |||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  49284293 aggaaaaaacttaggtacaatttcttagttgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttttcaaagtttgtta 49284392  T
Q  435 tatcc 439  Q
    |||||    
T  49284393 tatcc 49284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 334 - 438
Target Start/End: Original strand, 51789595 - 51789699
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| |  ||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||| ||||    
T  51789595 aaggagaaaacttaggtacaattccttaggtgattttcgtatggtttttaactaaattcaccatgatttcctcaattccataattttctcaaagtatgtt 51789694  T
Q  434 atatc 438  Q
    |||||    
T  51789695 atatc 51789699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 51276695 - 51276854
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||||||| ||| |||| | ||| | |||||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||| ||||    
T  51276695 ggagaaaatttaggtataatttcataggtgcttttcgtatggttcttaactaaattcattatgatttcctcaaatccataattttctcaaagtttattat 51276794  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||           ||||| |||||| |||||||||| |||||| |||||||| |||||||||    
T  51276795 at--aaaaaaaaaatgtatttttagctaagaaccatacgaaaagcacctaagaaattgtacc 51276854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 366 - 438
Target Start/End: Original strand, 48645044 - 48645116
Alignment:
Q  366 cttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    ||||||||||| ||||||||||||  || |||||||| |||||||||||||||||||||||||||||||||||    
T  48645044 cttttcgtatgcttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 48645116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 351 - 437
Target Start/End: Complemental strand, 27670299 - 27670213
Alignment:
Q  351 acaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||||||||  | |||||||||||||| ||||||||||| | |||||||| || |||||||||||||||||||||||| ||||||    
T  27670299 acaattccttatgtgcttttcgtatggtttttaactaaattcatcatgatttccttaaatccataattttctcaaagttttttatat 27670213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 362530 - 362462
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattt 402  Q
    |||||||||||||| ||||||||| |||| | ||||||||||| |||||||||||||||||||||||||    
T  362530 aaggagaaaatttaggtacaattctttaggtgcttttcgtatgattcttaactaaatttaccatgattt 362462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 340 - 439
Target Start/End: Original strand, 50856325 - 50856424
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||| ||| ||| ||||| |||| | ||||||||||| |||||| ||||||| ||||| |||| ||||| ||||||||||||||||| ||||||||||||    
T  50856325 aaaacttaggtaaaattctttaggtgcttttcgtatgattcttagctaaattcaccattatttcctcaagtccataattttctcaaaatttgttatatcc 50856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 349 - 439
Target Start/End: Original strand, 22338997 - 22339087
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||||||||| |||| |||||||  ||||||||||||||| | ||||||||||  |||||||||| ||||||||||||| |||| |||||    
T  22338997 gtacaattcctaagttgcttttcgattggttcttaactaaactcaccatgatttcatcaaatccatcattttctcaaagtctgttctatcc 22339087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 29598450 - 29598393
Alignment:
Q  380 cttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||||||||| || ||||||| || |||||||||||||||||||||||||||||||    
T  29598450 cttaactaaattcactatgatttccttaaatccataattttctcaaagtttgttatat 29598393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 367 - 436
Target Start/End: Original strand, 36007851 - 36007920
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    |||| ||| |||||||||||||| |  ||||||||| ||||||| |||||||||||||||||||||||||    
T  36007851 ttttggtacggttcttaactaaactatccatgatttcctcaaatacataattttctcaaagtttgttata 36007920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 378 - 438
Target Start/End: Original strand, 5059604 - 5059664
Alignment:
Q  378 ttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    ||||||| |||||||||||| ||||| | |||||||||||||| |||||||||||||||||    
T  5059604 ttcttaattaaatttaccataatttttttaaatccataattttatcaaagtttgttatatc 5059664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 9895370 - 9895322
Alignment:
Q  390 tttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  9895370 tttaccatgatttcctcaaatacataattttctcaaagtttgttatatc 9895322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 5189467 - 5189522
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  5189467 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 5189522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 19955084 - 19955029
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| ||||||| ||||||||||||||||||    
T  19955084 aaggagaaaacttaggtacaattccttaggtactttttgtatggttcttaactaaa 19955029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 49285148 - 49285093
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  49285148 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 49285093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 2854704 - 2854650
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  2854704 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 2854650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 19797153 - 19797099
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  19797153 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 19797099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 48954386 - 48954332
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  48954386 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 48954332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 448 - 514
Target Start/End: Original strand, 49285085 - 49285150
Alignment:
Q  448 tatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||| |||||| ||||| |||||    
T  49285085 tatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta-cctaagttttctcctttt 49285150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 50627130 - 50627184
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  50627130 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 50627184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 23698673 - 23698620
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  23698673 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 23698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 27926423 - 27926370
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  27926423 ggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 27926370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 2302533 - 2302481
Alignment:
Q  377 gttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtt 429  Q
    ||||||||| ||||| |||||||||| ||||||| ||||||||||||||||||    
T  2302533 gttcttaacaaaattcaccatgatttcctcaaattcataattttctcaaagtt 2302481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 9978222 - 9978170
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  9978222 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 9978170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 25297966 - 25298006
Alignment:
Q  457 ttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacc 25298006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 29598509 - 29598453
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatt 391  Q
    ||||||||| ||| ||||||||| |||| ||||||| ||||||||||||||||||||    
T  29598509 aggagaaaacttaggtacaattcgttaggtactttttgtatggttcttaactaaatt 29598453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 436
Target Start/End: Original strand, 39015225 - 39015293
Alignment:
Q  368 tttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||||||||| | | || | ||||||||||  ||||||||||||||||||||||||| ||||||    
T  39015225 tttcgtatggttctttaattaactaaccatgatttcttcaaatccataattttctcaaagttcgttata 39015293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 2125243 - 2125188
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| |||||||| ||||| | |||||||||| |||||||||||||    
T  2125243 aaggagaaaatttaggtacaatttcttaggtgcttttcgtatagttcttaactaaa 2125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 3607902 - 3607847
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||| ||||| | ||||||||||||||||||||||||    
T  3607902 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 3607847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 15324624 - 15324679
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||| ||||| | ||||||||||||||||||||||||    
T  15324624 aaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 15324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 42561468 - 42561413
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  42561468 aaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 42561413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 47940744 - 47940689
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| |  |||||||||||||||||||||||    
T  47940744 aaggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 47940689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 51789768 - 51789713
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||  | ||||||||||||||||||||||||    
T  51789768 aaggagaaaacttaggtacaattccttaaatgcttttcgtatggttcttaactaaa 51789713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 4299567 - 4299513
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| |  |||||||||||||||||||||||    
T  4299567 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4299513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 9895252 - 9895306
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||||||| ||| ||||  |||| ||||||||||||||||||||||||||    
T  9895252 aggagaaaatttaggtataattttttaggtacttttcgtatggttcttaactaaa 9895306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 439
Target Start/End: Original strand, 16518314 - 16518403
Alignment:
Q  352 caattccttagttacttttcgtatggttcttaactaaattt--accatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||| ||||| | ||||| |||||||| |||||||||| |  ||||| |||||||||| | ||||||||||||| |||||||| |||||    
T  16518314 caatttcttaggtgcttttggtatggtttttaactaaatattcaccataattttctcaattacataattttctcatagtttgttgtatcc 16518403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 42010431 - 42010501
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||| |||||||| |||| |||||||||||||||||||| |||  |||||||||   ||||||||||||||    
T  42010431 tttttgtatggtttttaattaaatttaccatgattttcttaaaatcataatttttcgaaagtttgttatat 42010501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 1387896 - 1387937
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  1387896 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 1387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 21930496 - 21930537
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  21930496 tttagttaagaaccatacgaaaaacacctaagtaattgtacc 21930537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 27240977 - 27240936
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  27240977 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 27240936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 27928469 - 27928416
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| |  |||||||||||||||||||||||    
T  27928469 ggagaaaacttatgtacaattccttaggtgtttttcgtatggttcttaactaaa 27928416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 14387185 - 14387133
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||||||||| |  |||||||||||||||||||||||    
T  14387185 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 14387133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 25298018 - 25297966
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaa 388  Q
    |||||||| ||| |||||||||||||| |  ||||||||||||||||||||||    
T  25298018 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaa 25297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 439
Target Start/End: Complemental strand, 28244058 - 28244026
Alignment:
Q  407 aaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||||||||||||||||||||||||||||    
T  28244058 aaatccataattttctcaaagtttgttatatcc 28244026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 42561348 - 42561308
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  42561348 tttagttaagaaccatacgaaaagcacctaaggaattgtac 42561308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 394
Target Start/End: Complemental strand, 50162708 - 50162652
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttac 394  Q
    |||||| ||| |||||||||||||| | ||||| |||||||||||||||||| ||||    
T  50162708 agaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaattac 50162652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 516
Target Start/End: Complemental strand, 51789650 - 51789591
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttcttttta 516  Q
    ||||||||| |||||| |||||| |||||||||||||||| |||||| ||||| |||||||    
T  51789650 tttagttaaaaaccatacgaaaatcacctaaggaattgta-cctaagttttctccttttta 51789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 389
Target Start/End: Original strand, 21930394 - 21930433
Alignment:
Q  350 tacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  21930394 tacaattccttagttgtttttcgtatggttcttaactaaa 21930433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 27241097 - 27241042
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| ||||||||| |||| | |||| |||||||||||||||||||    
T  27241097 aaggagaaaacttaggtacaattcgttaggtgctttgcgtatggttcttaactaaa 27241042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 439
Target Start/End: Original strand, 28431706 - 28431805
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||||||  |||||||  |||| || |||||||||| || ||||||||||| | ||||||||  ||||||| |||||||| | ||| ||| ||||||||    
T  28431706 aaaatttagatacaattttttagatatttttcgtatgatttttaactaaattcatcatgatttcttcaaatctataatttttttaaaatttattatatcc 28431805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 439
Target Start/End: Original strand, 35547737 - 35547803
Alignment:
Q  373 tatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||||||||||||||| | ||||| ||||  | ||||||||||||||||  ||||||| |||||||    
T  35547737 tatggttcttaactaaaatcaccataatttctttaaatccataattttctataagtttgatatatcc 35547803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 497
Target Start/End: Original strand, 36880628 - 36880670
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  36880628 ttttagttaagaaccatacgaaaagcatctaaggaattgtacc 36880670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 47940623 - 47940566
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    |||||||||||||||| |||||| |||||||| ||||||| |||||| ||||| |||||    
T  47940623 tttagttaagaaccatacgaaaagcacctaagaaattgta-cctaagttttctcctttt 47940566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 5189587 - 5189628
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| || |||||||||||||||    
T  5189587 tttagttaagaaccatacgaaaagcatctaaggaattgtacc 5189628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 25559214 - 25559255
Alignment:
Q  395 catgattttctcaaatccataattttctcaaagtttgttata 436  Q
    |||||||||||||||| ||||||||| ||| |||||||||||    
T  25559214 catgattttctcaaatacataattttttcagagtttgttata 25559255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 409
Target Start/End: Original strand, 28447894 - 28447963
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaa 409  Q
    |||||||| ||||||||  ||||||  | ||  |||||||||||| ||||||||| ||||||||||||||    
T  28447894 aaaatttaggtacaattttttagttgttctttttatggttcttaattaaatttactatgattttctcaaa 28447963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 40647116 - 40647169
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| |||  ||||||||||||| | |||||||| |||||||||||||||    
T  40647116 ggagaaaacttagttacaattccttagctgcttttcgtgtggttcttaactaaa 40647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 15324745 - 15324785
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||||| |||||| ||| |||||||||||||    
T  15324745 tttagttaagaaccatacgaaaagcacataaggaattgtac 15324785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 18651310 - 18651350
Alignment:
Q  396 atgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| | ||||||||||||||||||||| |||||||||    
T  18651310 atgatttccccaaatccataattttctcaaaatttgttata 18651350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 508
Target Start/End: Original strand, 27670261 - 27670313
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttct 508  Q
    ||||||||| |||||| |||||| ||| ||||||||||| ||||||| |||||    
T  27670261 tttagttaaaaaccatacgaaaagcacataaggaattgtgccctaagttttct 27670313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 51276865 - 51276813
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||| ||||| | |||||||||||||||||| |||||    
T  51276865 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttagctaaa 51276813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 94; Significance: 1e-45; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 336 - 514
Target Start/End: Complemental strand, 46005 - 45830
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46005 ggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttat 45906  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    ||||        |||||| ||||||||||||||||| | |||| |||||||||||||||| |||||| ||||| |||||    
T  45905 atcc--aaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgta-cctaagttttctcctttt 45830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 45826 - 45887
Alignment:
Q  328 ttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||| |||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  45826 ttttaaaaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 45887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 45952 - 45993
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||  ||||| ||||||||||||||||||    
T  45952 tttagttaagaaccataagaaaagcacctaaggaattgtacc 45993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 349 - 497
Target Start/End: Complemental strand, 30594851 - 30594705
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnnt 448  Q
    |||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||        |    
T  30594851 gtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc--aaaaaat 30594754  T
Q  449 atgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  30594753 atgtatttttagttaagaactatgcgaaaagcacctaaggaattgtacc 30594705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 336 - 514
Target Start/End: Original strand, 31231614 - 31231791
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  31231614 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 31231713  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    ||          |||||| ||||||||||||||||| |||||| |||||||||||||||| |||||| ||||| |||||    
T  31231714 atgtccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgta-cctaagttttctcctttt 31231791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 336 - 497
Target Start/End: Complemental strand, 24836191 - 24836032
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  24836191 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 24836092  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| |||||||| |||||||| |||||| |||||||| |||||||||    
T  24836091 atcc--aaaaaatatgtatttttagttnagaaccatacgaaaagcacctaagcaattgtacc 24836032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 34052452 - 34052291
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  34052452 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttagctaaattcaccatgatttcctcaaattcataattttctcaaagtttgtt 34052353  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||| ||||||||||| ||||||    
T  34052352 atatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaaatgtacc 34052291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 335 - 497
Target Start/End: Original strand, 30259065 - 30259225
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    |||| |||| ||| |||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30259065 aggataaaacttaggtacaattccttaggtgcttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgtta 30259164  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        |||||| ||||||||||||||||| | |||| |||| |||||||||||||    
T  30259165 tatcc--aaaaaatatgtatttttagttaagaaccatacaaaaagcacccaaggaattgtacc 30259225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 20184238 - 20184398
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  20184238 ggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 20184337  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||||||||||| ||| |||||| || |||||||||||||||    
T  20184338 atcc-aaaaaaatatgtatttttagttaagaatcatacgaaaagcagctaaggaattgtacc 20184398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 336 - 497
Target Start/End: Complemental strand, 38883392 - 38883233
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||||||    
T  38883392 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 38883293  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||||||||||||||| |||||| || |||||||||||||||    
T  38883292 atcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 38883233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 10936470 - 10936629
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | ||||||||| |||||||||||||||| ||||||| || |||||||| |||||||||||||||||||||||    
T  10936470 ggagaaaacttatgtacaattccttaggtgcttttcgtacggttcttaactaaattcaccatgacttcctcaaatctataattttctcaaagtttgttat 10936569  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    | ||        |||||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  10936570 aacc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacc 10936629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 35339276 - 35339437
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||    
T  35339276 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcttcaaatccataattttctcaaagtttgtt 35339375  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||| ||||||||||| ||||||  || ||||||||||||||    
T  35339376 atatcc--aaaaaatatgtatttttatttaagaaccatacgaaaagtacataaggaattgtacc 35339437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 334 - 495
Target Start/End: Original strand, 3953040 - 3953199
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||  |||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  3953040 aaggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgtt 3953139  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    ||||||        |||||| ||||||||||||||||| | ||||  ||||||| |||||||    
T  3953140 atatcc--aaaaaatatgtatttttagttaagaaccatacaaaaagtacctaagtaattgta 3953199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 336 - 478
Target Start/End: Original strand, 24123755 - 24123897
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||||||| |||||||||||||  ||||||| ||||||||| ||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  24123755 ggagaaaatttaggtacaattccttatgtactttttgtatggttcctaactaaaaatactatgatttcctcaaatccataattttctcaaagtttgttat 24123854  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaa 478  Q
    ||||        |||||| ||||| ||||||||||| ||||||    
T  24123855 atccaaaaaaaatatgtatttttaattaagaaccatacgaaaa 24123897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 337 - 439
Target Start/End: Original strand, 31521527 - 31521628
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  31521527 gagaaaattta-gtacaatttcttagatgcttttcgtatggttcttaactaaatttaccatgattttctcaaattcataattttttcaaagtttattata 31521625  T
Q  437 tcc 439  Q
    |||    
T  31521626 tcc 31521628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 12142365 - 12142204
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||||||  |||||||||||||  |  ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  12142365 aggagaaaatttgggtacaattccttatgtgtttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagattgtta 12142266  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        ||| || ||||||||||||||||| |  ||| ||| ||||||||||||||    
T  12142265 tatcc-aaaaatatatatatttttagttaagaaccatacccaaagcacgtaaggaattgtacc 12142204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 335 - 496
Target Start/End: Original strand, 39617840 - 39618000
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||| ||||| |  | ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  39617840 aggagaaaacttaggtacaatttcttagatgttcttcgtatggttcttaactaaattcaccatgatttcctccaatccataattttctcaaagtttgtta 39617939  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||        ||| || |||||||||||||| || |||||| ||||||| |||||||||    
T  39617940 tatcc-aaaaaaatatttatttttagttaagaactatacgaaaagcacctaaagaattgtac 39618000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 336 - 493
Target Start/End: Original strand, 45997508 - 45997663
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||| | ||  | ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  45997508 ggagaaaacttaggtacaatttcatatgtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattat 45997607  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattg 493  Q
    ||||        |||||| ||||||||||||||||| |  ||||||||||||||||||    
T  45997608 atcc--aaaaaatatgtatttttagttaagaaccatacctaaaacacctaaggaattg 45997663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 338 - 497
Target Start/End: Complemental strand, 37093937 - 37093780
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    ||||||||||  ||||||| ||||| |||||||||||||||| ||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||    
T  37093937 agaaaatttagatacaatttcttaggtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatttataattttctcaaagtttgttatat 37093838  T
Q  438 ccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||        ||| || ||||| ||||||| ||| ||||||| ||||||| |||||||||    
T  37093837 cc--aaaaaatatatatttttaattaagaatcatacgaaaaatacctaagaaattgtacc 37093780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 336 - 497
Target Start/End: Complemental strand, 48103536 - 48103380
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| |||  |||||||| |||| | ||||| ||||||||||||||||||||   | |||||| ||||||||||||||  ||||||||||||||||    
T  48103536 ggagaaaacttatctacaattctttaggtgctttttgtatggttcttaactaaatt---cgtgatttcctcaaatccataataatctcaaagtttgttat 48103440  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||||||||||| ||| ||||||||||||||| |||||||||    
T  48103439 atcc--aaaaaatatgtatttttagttaagaatcatacgaaaaacacctaagaaattgtacc 48103380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 337 - 497
Target Start/End: Original strand, 39143713 - 39143865
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| ||| ||||||||| || | | ||||||||||||||||| |||||||| ||||| |||| |||||||||||||| ||||||||||||||||||    
T  39143713 gagaaaacttaggtacaattcattggatgcttttcgtatggttcttgactaaattcaccataatttcctcaaatccataatattctcaaagtttgttata 39143812  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |          ||| ||  | |||||||||||||| |||||||||||||| ||||||||||    
T  39143813 t--------aatatatatatatagttaagaaccatacgaaaaacacctaatgaattgtacc 39143865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 438
Target Start/End: Complemental strand, 40358291 - 40358184
Alignment:
Q  334 aaggagaaaatttaagtacaattcct---tagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagttt 430  Q
    |||||||||| ||| |||||||||||   ||| | |||||| |||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  40358291 aaggagaaaacttaggtacaattcctccttaggtgcttttcctatgattcttaactaaattcaccatgatttcctcaaattcataattttctcaaagttt 40358192  T
Q  431 gttatatc 438  Q
    ||||||||    
T  40358191 gttatatc 40358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 9285714 - 9285873
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| ||||||||| || | | ||||| ||||||||||||| |||||| |||||||||| |||||||  |||||||| ||||||||||||||    
T  9285714 ggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttat 9285813  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||| ||||||||||| ||||||  |||||| ||||||||||    
T  9285814 atcc--aaaaaatatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacc 9285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 9289781 - 9289940
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| ||||||||| || | | ||||| ||||||||||||| |||||| |||||||||| |||||||  |||||||| ||||||||||||||    
T  9289781 ggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttat 9289880  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||| ||||||||||| ||||||  |||||| ||||||||||    
T  9289881 atcc--aaaaaatatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacc 9289940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 367 - 439
Target Start/End: Original strand, 16876487 - 16876559
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  16876487 ttttcgtatggttcttacttaaatttaccatgattttctcaaatccgtaattttcttagagtttgttatatcc 16876559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 493
Target Start/End: Original strand, 25742434 - 25742586
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||| ||||| |  ||||| |||||||||||||||||||   ||| |||| |||||||||||||||||||||||||||||||    
T  25742434 aggagaaaacttatgtacaatttcttaggtgtttttcctatggttcttaactaaatt---cat-atttcctcaaatccataattttctcaaagtttgtta 25742529  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattg 493  Q
    |||||        |||||| |||||||||| |||||| |||||| ||| |||| |||||    
T  25742530 tatcc--aaaaaatatgtatttttagttaacaaccatacgaaaagcacttaagaaattg 25742586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 349 - 438
Target Start/End: Original strand, 38989084 - 38989173
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    |||||||| ||||  || ||||||||| ||| ||||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||||    
T  38989084 gtacaatttcttatgtatttttcgtatagtttttaactaaatttatcataattttcttaaatctataattttctcaaagtttgttatatc 38989173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 393 - 497
Target Start/End: Original strand, 38528467 - 38528571
Alignment:
Q  393 accatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaatt 492  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||          |||||| ||||||||||||||||| |||||| |||||||||||||    
T  38528467 accatgaattcctcgaatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaatt 38528566  T
Q  493 gtacc 497  Q
    |||||    
T  38528567 gtacc 38528571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 10398460 - 10398390
Alignment:
Q  366 cttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||| ||||||||||||||||||||  ||||||||| ||||||| |||||| ||||||||||||||||||    
T  10398460 ctttttgtatggttcttaactaaattatccatgatttcctcaaatacataatcttctcaaagtttgttata 10398390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 409
Target Start/End: Original strand, 35665632 - 35665706
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaa 409  Q
    ||||||||| ||| |||||||| ||||| | ||||||||||||||||||||||||  ||||||||||||||||||    
T  35665632 aggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaaaataccatgattttctcaaa 35665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 29278004 - 29277905
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||| ||| |||||||||||||  || ||| |||||| || ||||||||||| |||||||||| || ||||||| |||||||||||| |||||| |||||    
T  29278004 aaaacttaggtacaattccttatatattttccgtatgatttttaactaaattcaccatgatttccttaaatccaaaattttctcaaactttgttgtatcc 29277905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 367 - 438
Target Start/End: Complemental strand, 33749784 - 33749713
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    |||| |||||||||||||||||||| | |||||||| || |||| ||||||||||||||||||| |||||||    
T  33749784 tttttgtatggttcttaactaaattcatcatgatttccttaaattcataattttctcaaagtttattatatc 33749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 38528594 - 38528530
Alignment:
Q  325 attttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||  |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  38528594 atttttttaaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 38528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 9285887 - 9285832
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||    
T  9285887 aaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 9285832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 9289954 - 9289899
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||    
T  9289954 aaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 9289899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 31231789 - 31231734
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  31231789 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 31231734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 46144066 - 46144023
Alignment:
Q  167 ttgaattcaagctagagaaataaagggtataatgggaaagaatt 210  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  46144066 ttgaattcaacctagagaaataaagggtataatgggaaagaatt 46144023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 10936642 - 10936588
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  10936642 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 10936588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 334 - 388
Target Start/End: Original strand, 33721825 - 33721879
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaa 388  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||    
T  33721825 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 33721879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 38883220 - 38883274
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  38883220 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 38883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 497
Target Start/End: Original strand, 35665691 - 35665775
Alignment:
Q  411 ccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||| ||||||||||||||||||||||||        |||||| |||||||||| |||||| |||||| ||||||||||||||||||    
T  35665691 ccatgattttctcaaagtttgttatatccaaaaaa--tatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtacc 35665775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 437
Target Start/End: Original strand, 47237432 - 47237526
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| ||| ||||||| || | |||||| |||||||||||||||||||       |||| ||| |||||||||||||||||||||||||||    
T  47237432 aggagaaaacttaggtataattcct-aggtgcttttcctatggttcttaactaaatt-------atttcctcgaatccataattttctcaaagtttgtta 47237523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 20184412 - 20184357
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||| ||||||||||||    
T  20184412 aaggagaaaacttaggtacaattccttagctgcttttcgtatgattcttaactaaa 20184357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 24836138 - 24836179
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  24836138 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 24836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 29277838 - 29277891
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| ||||||||| |||| ||||||| ||||||||||||||||||    
T  29277838 ggagaaaacttaggtacaattctttaggtactttttgtatggttcttaactaaa 29277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 34052279 - 34052332
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| ||||| |||||||| | ||||||||||||||||||||||||    
T  34052279 ggagaaaacttaggtacatttccttaggtgcttttcgtatggttcttaactaaa 34052332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 35339331 - 35339290
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  35339331 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 35339290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 24836018 - 24836073
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||| ||||| | |||||||||||||||| |||||||    
T  24836018 aaggagaaaacttaggtacaattgcttaggtgcttttcgtatggttctnaactaaa 24836073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 497
Target Start/End: Complemental strand, 33721879 - 33721839
Alignment:
Q  457 ttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacc 33721839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 35665786 - 35665734
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||||||||| | |||||||||||||| |||||||||    
T  35665786 gagaaaacttaggtacaattccttaggtgcttttcgtatggtttttaactaaa 35665734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 30259239 - 30259184
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||| | | ||||| ||||||||||||||||||    
T  30259239 aaggagaaaacttaggtacaattccttgggtgctttttgtatggttcttaactaaa 30259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 30594691 - 30594746
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||| || |||||||||||||    
T  30594691 aaggagaaaacttaggtacaattccttaggtgcttttcgcatagttcttaactaaa 30594746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 507
Target Start/End: Original strand, 30594811 - 30594861
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttc 507  Q
    |||||||||||||||| |||||| || ||||||||||||| |||||||||||    
T  30594811 tttagttaagaaccatacgaaaagcatctaaggaattgta-cctaagctttc 30594861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 35339447 - 35339396
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||| ||| |||||||||||||  ||||||||||||||||||||| ||||    
T  35339447 agaaaacttaggtacaattccttatgtacttttcgtatggttcttaaataaa 35339396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 37093766 - 37093821
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| |||||||| ||||| || |||||||||| ||||||| ||||    
T  37093766 aaggagaaaatttaggtacaatttcttaggtatttttcgtatgattcttaattaaa 37093821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Complemental strand, 44148777 - 44148722
Alignment:
Q  377 gttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgt 432  Q
    |||||||| |||||| ||  |||||| || ||||||||||||||||||||||||||    
T  44148777 gttcttaattaaattcactgtgatttccttaaatccataattttctcaaagtttgt 44148722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 47237601 - 47237546
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||| || || | ||||||||||||||||||||||||    
T  47237601 aaggagaaaacttaggtacaatttctaaggtgcttttcgtatggttcttaactaaa 47237546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 436
Target Start/End: Complemental strand, 1403032 - 1402990
Alignment:
Q  394 ccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||| |||||||| |||||||||||||| |||||||||    
T  1403032 ccatgatttcctcaaatctataattttctcaaaatttgttata 1402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 498
Target Start/End: Original strand, 12142311 - 12142353
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccc 498  Q
    ||||||||||||| || |||||||||| |||||||||||||||    
T  12142311 tttagttaagaactatacgaaaaacacataaggaattgtaccc 12142353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 436
Target Start/End: Complemental strand, 25572925 - 25572883
Alignment:
Q  394 ccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    |||||||||  ||||| ||||||||||||||||||||||||||    
T  25572925 ccatgatttcttcaaaaccataattttctcaaagtttgttata 25572883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 497
Target Start/End: Complemental strand, 35665687 - 35665645
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| |||||||| |||||||||    
T  35665687 ttttagttaagaaccatacgaaaagcacctaagcaattgtacc 35665645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 497
Target Start/End: Original strand, 38883338 - 38883380
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  38883338 ttttagttaagaaccatacgaaaagcatctaaggaattgtacc 38883380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 3953213 - 3953160
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| |||  ||||||| ||||| ||||||| ||||||||||||||||||    
T  3953213 ggagaaaacttagatacaattacttaggtactttttgtatggttcttaactaaa 3953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 7955116 - 7955051
Alignment:
Q  372 gtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    ||||||||| |||||||||||| |||||||| | |||||| ||||| |||||  ||||| ||||||    
T  7955116 gtatggttcataactaaatttatcatgatttccacaaatctataatcttctctgagttttttatat 7955051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 20184291 - 20184250
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||| ||| |||||| ||||||||||||||||||    
T  20184291 tttagttaagaatcatacgaaaagcacctaaggaattgtacc 20184250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 430
Target Start/End: Original strand, 21581183 - 21581240
Alignment:
Q  373 tatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagttt 430  Q
    ||||||||||||||||||| | ||||||||| | |||||||| |||||  ||||||||    
T  21581183 tatggttcttaactaaattcatcatgatttttttaaatccatgatttttgcaaagttt 21581240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 30259119 - 30259078
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||  ||||| ||||||||||||||||||    
T  30259119 tttagttaagaaccataggaaaagcacctaaggaattgtacc 30259078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 31231667 - 31231626
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| | |||| ||||||||||||||||||    
T  31231667 tttagttaagaaccatacaaaaagcacctaaggaattgtacc 31231626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 436
Target Start/End: Original strand, 32482245 - 32482314
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    |||| ||||| ||| ||||||||||   ||||||||||||||||||| |||||| | |||| ||||||||    
T  32482245 tttttgtatgattcctaactaaattactcatgattttctcaaatccacaatttttttaaaggttgttata 32482314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 34052397 - 34052438
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||| |||||||||| |||||| ||||||||||||||||||    
T  34052397 tttagctaagaaccatacgaaaagcacctaaggaattgtacc 34052438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 10936523 - 10936483
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||| | |||||| |||||||||||||||||    
T  10936523 tttagttaagaaccgtacgaaaagcacctaaggaattgtac 10936483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 25742488 - 25742448
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||||||||||||  |||||||||||||| ||||||||    
T  25742488 tttagttaagaaccataggaaaaacacctaagaaattgtac 25742448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 497
Target Start/End: Original strand, 47237539 - 47237587
Alignment:
Q  449 atgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||| ||||||||||||||||| |||||| ||||| || |||||||||    
T  47237539 atgtatttttagttaagaaccatacgaaaagcaccttagaaattgtacc 47237587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 9e-44; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 15882374 - 15882212
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||    
T  15882374 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataatattctcaaagttagtt 15882275  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| | |||| ||||||||||||||||||    
T  15882274 atatcc-aaaaaaatatgtatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 15882212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 340 - 493
Target Start/End: Original strand, 29780963 - 29781114
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||| |||||||||||||| | |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  29780963 aaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaatttaccataatttcctcaaatccataattttctcaaagtttgttatatcc 29781062  T
Q  440 nnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattg 493  Q
            |||||| ||||||||||||||||| |||||| || |||||||||||    
T  29781063 --aaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattg 29781114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 338 - 486
Target Start/End: Complemental strand, 40891182 - 40891036
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  40891182 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 40891083  T
Q  438 ccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaa 486  Q
    ||        |||||| ||||||||||||||| | ||||||||||||||    
T  40891082 cc--aaaaaatatgtatttttagttaagaaccgtacgaaaaacacctaa 40891036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 17426626 - 17426789
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||||||||| |||| | |||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  17426626 aaggagaaaacttaggtacaattcattaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatctataattttctcaaagtttgtt 17426725  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||  | ||||||||||||||||| |||||| |||||||  |||||||||    
T  17426726 atatccaaaaaaaatatacatttttagttaagaaccatacgaaaagcacctaaaaaattgtacc 17426789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 338 - 497
Target Start/End: Complemental strand, 37114407 - 37114250
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||||||| ||||||||| |||| |  |||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  37114407 agaaaatttaggtacaattctttagatgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttctcaaagtttattatat 37114308  T
Q  438 ccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||        |||||| ||||| ||||||||||| |||||| ||||||||||||||||||    
T  37114307 cc--aaaaaatatgtatttttaattaagaaccatacgaaaagcacctaaggaattgtacc 37114250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 335 - 496
Target Start/End: Complemental strand, 38629646 - 38629487
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||| |||||||||||||| |  ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||    
T  38629646 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttatta 38629547  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||        |||||| ||||||||||||||||| |||||| ||  ||| |||||||||    
T  38629546 tatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcatttaaagaattgtac 38629487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 8210495 - 8210335
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| |||||||||||||||||| |  |||| ||||| |||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||    
T  8210495 aggagaaaacttaagtacaattccttagatgttttttgtatgattcttaaccaaattcatcatgatttcctcaaatccataattttctcaaagtttgtta 8210396  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        ||| ||  |||||||||||| ||| |||||| ||||||||||||||||||    
T  8210395 tatccaaaaaatatatata--tttagttaagaatcatacgaaaagcacctaaggaattgtacc 8210335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 333 - 497
Target Start/End: Complemental strand, 38520192 - 38520030
Alignment:
Q  333 caaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgt 432  Q
    ||||||||||| ||| |||||||||||||  | ||||||||||| || ||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  38520192 caaggagaaaacttaggtacaattccttaagtgcttttcgtatgttttttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgt 38520093  T
Q  433 tatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||        ||| || ||||||||||||||||| |||||| || |||||||||| ||||    
T  38520092 tatatcc--aaaaaatatatatttttagttaagaaccatacgaaaagcaactaaggaattatacc 38520030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 333 - 495
Target Start/End: Original strand, 23940801 - 23940962
Alignment:
Q  333 caaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgt 432  Q
    ||||||||||| ||  |||||||| ||||  | ||||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  23940801 caaggagaaaacttcggtacaatttcttaagtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgt 23940900  T
Q  433 tatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    |||||          |||||| |||||||||| |||||| |||||| ||||||||||||||||    
T  23940901 tatat-ttaaaaaaatatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgta 23940962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 334 - 519
Target Start/End: Complemental strand, 12234640 - 12234457
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaag-tttgt 432  Q
    |||||||||| ||| |||||||| ||||| | |||||||||||||| ||||||||||| || ||||||| ||||||| |||||||||||||||| |||||    
T  12234640 aaggagaaaacttaggtacaatttcttagatgcttttcgtatggttattaactaaattcacgatgatttcctcaaattcataattttctcaaagttttgt 12234541  T
Q  433 tatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttttataa 519  Q
    |||||||        |||||| ||||||||||||||||| |||||| |||| || ||||| || |||||| ||||| ||||| ||||    
T  12234540 tatatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcacccaaagaattata-cctaagttttctccttttaataa 12234457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 335 - 498
Target Start/End: Original strand, 24741822 - 24741983
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    |||| |||| ||| |||||||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||| |||    
T  24741822 aggaaaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccatgattttctcagagtttatta 24741921  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccc 498  Q
    ||| |          |||| ||||||||||||||||| |||||| ||||| | |||||||||||    
T  24741922 tatgcaacatagg--tgtatttttagttaagaaccatacgaaaatcacctcaagaattgtaccc 24741983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 336 - 438
Target Start/End: Original strand, 33100645 - 33100747
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||| ||||| | ||||||||||||||||||||||||  |||| | |||| ||||||||||||||||||||||||||||||||    
T  33100645 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaataccgttatttcctcaaatccataattttctcaaagtttgttat 33100744  T
Q  436 atc 438  Q
    |||    
T  33100745 atc 33100747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 349 - 437
Target Start/End: Original strand, 4261989 - 4262077
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    ||||||||| |||| | |||||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||||    
T  4261989 gtacaattctttaggtgcttttcgtatggttcttaactaaattcactatgatttcctcaagtccataattttctcaaagtttgttatat 4262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 24211276 - 24211437
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||||||||| |||| | ||||||||||||||||||| |||||| ||| | |||| || || ||||||||||||||| ||||||||    
T  24211276 aaggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaattaaattcaccgtaatttccttaattccataattttctcatagtttgtt 24211375  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||         |||||| || || ||||||||||| |||||| ||||||||||||||||||    
T  24211376 atatc--taaaaaatatgtatttctatttaagaaccatacgaaaagcacctaaggaattgtacc 24211437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 11828627 - 11828698
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||    
T  11828627 ttttcgtatggttcttaactaaattcaccataatttcctcaaatccattattttctcaaagtttgttatatc 11828698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 35467343 - 35467243
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    ||||| |||| ||| |||||||||||||  | |||||||||||||||||||||||||| | ||||||||  | |||||||||||||||| ||||||||||    
T  35467343 aaggaaaaaacttacgtacaattccttatgtgcttttcgtatggttcttaactaaattcatcatgatttctttaaatccataattttcttaaagtttgtt 35467244  T
Q  434 a 434  Q
    |    
T  35467243 a 35467243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 340 - 437
Target Start/End: Original strand, 14834676 - 14834770
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||| ||| |||||||||||||  | |||||||||||||||||||||||||| ||||||||||||| |||| |||||||   ||||||||||||||||    
T  14834676 aaaacttacgtacaattccttacgtgcttttcgtatggttcttaactaaattcaccatgattttcttaaattcataatt---tcaaagtttgttatat 14834770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 439
Target Start/End: Complemental strand, 38405279 - 38405207
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||| |||||||||||||||||||| |  |||||||||| |||| | ||||||||||||||||||||||||||    
T  38405279 tttttgtatggttcttaactaaattcataatgattttcttaaattcgtaattttctcaaagtttgttatatcc 38405207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 38520016 - 38520071
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  38520016 aaggagaaaatttaggtataattccttagttgcttttcgtatggttcttaactaaa 38520071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 336 - 426
Target Start/End: Complemental strand, 38515675 - 38515585
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaa 426  Q
    |||||||| ||| |||||||||||||| | | |||||| ||||| |||| ||||  ||| ||||||| |||||||||||||||||||||||    
T  38515675 ggagaaaacttaggtacaattccttagatgcatttcgtgtggtttttaattaaaaatacaatgatttcctcaaatccataattttctcaaa 38515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 40393894 - 40393791
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||| ||||| |||||| ||||| | |||||  ||||||||||| ||||||| ||||| |||| |||||||   ||||||||||||| |||||||    
T  40393894 aggagaaaacttaagcacaatttcttaggtgcttttattatggttcttagctaaattcaccataatttcctcaaat-tttaattttctcaaaatttgtta 40393796  T
Q  435 tatcc 439  Q
    |||||    
T  40393795 tatcc 40393791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 38629473 - 38629527
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||||||||||||||||| |||  | ||||||||||||||||||||||||    
T  38629473 aggagaaaatttaagtacaattctttaaatgcttttcgtatggttcttaactaaa 38629527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 38629592 - 38629633
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  38629592 tttagttaagaaccatacgaaaaacacctaaggaattgtacc 38629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 373 - 436
Target Start/End: Original strand, 7959857 - 7959920
Alignment:
Q  373 tatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    |||||||||||||||||||| | ||||||| || ||||| ||| || |||||||||||||||||    
T  7959857 tatggttcttaactaaatttgctatgatttcctaaaatctatagttgtctcaaagtttgttata 7959920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 390
Target Start/End: Original strand, 8210322 - 8210377
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaat 390  Q
    ||||||||| ||| |||||||||||||| | ||||||||||| |||||||||||||    
T  8210322 aggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaat 8210377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 15882198 - 15882253
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  15882198 aaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 15882253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 29781132 - 29781077
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| || ||||||||||| | ||||||||||||||||||||||||    
T  29781132 aaggagaaaacttaggtccaattccttagatgcttttcgtatggttcttaactaaa 29781077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 510
Target Start/End: Original strand, 40891131 - 40891184
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttc 510  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||| |||||||    
T  40891131 tttagttaagaaccatacgaaaagcacctaaggaattgta-cctaagttttcttc 40891184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 15882319 - 15882360
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  15882319 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 15882360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 24741876 - 24741835
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  24741876 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 24741835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 33940767 - 33940710
Alignment:
Q  348 agtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttct 405  Q
    ||||||||||||||| |  || ||  ||||||||||||||||||||||||||||||||    
T  33940767 agtacaattccttaggtgtttgtcacatggttcttaactaaatttaccatgattttct 33940710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 24211449 - 24211401
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaa 384  Q
    |||||||| ||| |||||||||||||| | |||||||||||||||||||    
T  24211449 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 24211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 33940726 - 33940766
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  33940726 tttagttaagaaccatgtgacaaacacctaaggaattgtac 33940766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 37114239 - 37114291
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||| ||| |||||||||||||| | ||||||||||||||||||| ||||    
T  37114239 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 37114291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 433
Target Start/End: Original strand, 9775250 - 9775297
Alignment:
Q  386 taaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||| ||||  |||||||||||| ||||||||||||||||||||||    
T  9775250 taaattcaccaaaattttctcaaattcataattttctcaaagtttgtt 9775297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 25264277 - 25264328
Alignment:
Q  386 taaatttaccatgattttctcaaatccataattttctcaaagtttgttatat 437  Q
    |||||| || ||||||| ||||||| ||||||||||| ||||||||||||||    
T  25264277 taaattcacaatgatttcctcaaattcataattttcttaaagtttgttatat 25264328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 436
Target Start/End: Original strand, 29869938 - 29869973
Alignment:
Q  401 tttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||||||| ||||||||||||||||||||||    
T  29869938 tttctcaaatccacaattttctcaaagtttgttata 29869973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 11828775 - 11828721
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| ||||||||||||| || |||||| ||| |||||||||||||    
T  11828775 aggagaaaacttaggtacaattccttacttgcttttcatatcgttcttaactaaa 11828721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 17426802 - 17426748
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| ||||||||  |||| | ||||||||||||||||||||||||    
T  17426802 aggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 17426748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 497
Target Start/End: Complemental strand, 33100699 - 33100657
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| |||||||| |||||||||    
T  33100699 ttttagttaagaaccatacgaaaagcacctaagaaattgtacc 33100657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 493
Target Start/End: Complemental strand, 11828649 - 11828612
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattg 493  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  11828649 tttagttaagaaccatacgaaaaacacctaagaaattg 11828612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 17426681 - 17426640
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  17426681 tttagttaagaaccatacgaaaagcacctaatgaattgtacc 17426640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 23940976 - 23940923
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| |||  ||||||||||||| | |||||||||||||| |||||||||    
T  23940976 ggagaaaacttagttacaattccttaggtgcttttcgtatggtttttaactaaa 23940923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 29781012 - 29780971
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||| |||||| |||||| ||||||||||||||||||    
T  29781012 tttagttaaaaaccatacgaaaagcacctaaggaattgtacc 29780971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 33390798 - 33390717
Alignment:
Q  355 ttccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    |||||||| | |||||| ||||||| ||| |||||||   || ||||| ||||||| || ||||||||||||||| ||||||    
T  33390798 ttccttaggtgcttttcatatggtttttagctaaattactcacgatttcctcaaattcacaattttctcaaagttcgttata 33390717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 4262029 - 4261989
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||||| |||||| ||||||| |||||||||    
T  4262029 tttagttaagaaccatacgaaaagcacctaaagaattgtac 4261989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 14834725 - 14834685
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||||| |||||| ||| |||||||||||||    
T  14834725 tttagttaagaaccatacgaaaagcacgtaaggaattgtac 14834685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 35467161 - 35467224
Alignment:
Q  325 attttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||||| |||| ||| ||||||||| |||| ||||||| || |||||||||||||||    
T  35467161 atttttta-aaggacaaaacttaggtacaattctttagatactttttgtgtggttcttaactaaa 35467224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 35467288 - 35467328
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||||| |||||| ||| |||||||||||||    
T  35467288 tttagttaagaaccatacgaaaagcacataaggaattgtac 35467328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 90; Significance: 3e-43; HSPs: 3)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 335 - 497
Target Start/End: Complemental strand, 7258 - 7098
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtta 434  Q
    ||||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  7258 aggagaaaatttaggtacgattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgtta 7159  T
Q  435 tatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||        ||| || ||||||||||||| ||| |||||||||||||||||||||||||    
T  7158 tatcc--aaaatatatatatttttagttaagaatcatacgaaaaacacctaaggaattgtacc 7098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 7085 - 7139
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||||||| |||||||||||||| |  |||||||||| ||||||||||||    
T  7085 aggagaaaatttaggtacaattccttaggtgtttttcgtatgattcttaactaaa 7139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 7204 - 7245
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| |||||||||||| |||||    
T  7204 tttagttaagaaccatacgaaaagcacctaaggaatcgtacc 7245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 5e-42; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 33629343 - 33629506
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||  | ||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  33629343 aaggagaaaacttaggtacaattccttatgtgcttttggtatggttcttaactaaattcactatgattttctcaaatccataattttctcaaagtttgtt 33629442  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        ||| || ||||||||||||| ||| ||||||||| |||||||||||||||    
T  33629443 atatccaaaaaatatatatatttttagttaagaatcatacgaaaaacatctaaggaattgtacc 33629506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 324 - 497
Target Start/End: Original strand, 35420600 - 35420771
Alignment:
Q  324 gattttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctc 423  Q
    |||||| || |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||    
T  35420600 gattttataaaaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctc 35420699  T
Q  424 aaagtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||         |||||| ||||||||||||||||| |||||| || |||||||||||||||    
T  35420700 aaagtttgttatatc--aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 35420771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 336 - 515
Target Start/End: Complemental strand, 15856014 - 15855838
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||||||    
T  15856014 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 15855915  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttcttttt 515  Q
    |||         |||||| ||||||||||||||||| |||||| || ||||||||||||| |||||| ||||| ||||||    
T  15855914 atc--aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgta-cctaagttttctccttttt 15855838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 1138732 - 1138571
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||| ||| | |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  1138732 aaggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgtt 1138633  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| ||||||||||||||||| |||||| |||| || ||||||||||    
T  1138632 atatcc--aaaaaatatgtatttttagttaagaaccatacgaaaagcaccaaaagaattgtacc 1138571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 336 - 497
Target Start/End: Complemental strand, 16473126 - 16472967
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| |||||||||||||| | ||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||||||||||||||    
T  16473126 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 16473027  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||         |||||| ||||||||||||||||| |||||| || |||||||||||||||    
T  16473026 atc--aaaaaaatatgtatttttagttaagaaccatacgaaaagcatctaaggaattgtacc 16472967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 327 - 496
Target Start/End: Complemental strand, 43539287 - 43539120
Alignment:
Q  327 tttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaa 426  Q
    |||| |||||||||||||||| |||||||||||||| |  |||||||||||| |||||||||||| | | ||||||||| ||||||||||||||||||||    
T  43539287 ttttgacaaggagaaaatttaggtacaattccttaggtgtttttcgtatggtccttaactaaattcatcgtgattttcttaaatccataattttctcaaa 43539188  T
Q  427 gtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||        |||||| || ||||| |||||||| ||||||| ||||||| ||||||||    
T  43539187 gtttgttatatcc--aaaaaatatgtatttatagttcagaaccatacgaaaaatacctaagaaattgtac 43539120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 334 - 522
Target Start/End: Complemental strand, 4266155 - 4265970
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||  |||||||||||||| |  ||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||| ||||||||||    
T  4266155 aaggagaaaacttcggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccgtgatttcttcaaatccataattttcttaaagtttgtt 4266056  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttttataaatc 522  Q
    | ||||        |||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||| ||||| ||| || ||||||    
T  4266055 acatcc--aaaaaatatgtatttttagttaagaaccatacgaaaaacacctaagaaattgta-cctaagttttctccttattttaaatc 4265970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 334 - 497
Target Start/End: Complemental strand, 20476604 - 20476443
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||    
T  20476604 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaaatttgtt 20476505  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||         |||||| ||||||||||||||||| |||||| || |||  ||||||||||    
T  20476504 atatc--acaaaaatatgtatttttagttaagaaccatacgaaaagcatctagagaattgtacc 20476443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 328 - 496
Target Start/End: Original strand, 13754283 - 13754449
Alignment:
Q  328 ttttacaaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaag 427  Q
    ||||| |||||||||| ||| |||||||||||||  |  |||||||||| |||||||||||||| ||||| |||| ||||||| ||||||||||||||||    
T  13754283 ttttataaggagaaaacttaggtacaattccttatgtgtttttcgtatgattcttaactaaattcaccataatttcctcaaattcataattttctcaaag 13754382  T
Q  428 tttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||| ||||||         |||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  13754383 tttgctatatc--aaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaagtaattgtac 13754449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 372 - 497
Target Start/End: Original strand, 24397282 - 24397405
Alignment:
Q  372 gtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaagaaccat 471  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||        |||||| |||||||||||||||||    
T  24397282 gtatggttcttaactaaattcac-atgatttcctcaaatccataattttctcaaagtttgttatatcc-aaaaaaatatgtatttttagttaagaaccat 24397379  T
Q  472 gcgaaaaacacctaaggaattgtacc 497  Q
     |||||| ||||||||||||||||||    
T  24397380 acgaaaagcacctaaggaattgtacc 24397405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 21259728 - 21259889
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||||||||| |||  | ||||||||||||||||||  |||||| |||||||||| ||||||  ||||||||||||||||||||||    
T  21259728 aaggagaaaacttacgtacaattctttatgtgcttttcgtatggttcttagttaaattcaccatgatttcctcaaaatcataattttctcaaagtttgtt 21259827  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||        |||||| |||||||||||||||||  |||||  |||||||||||||||||    
T  21259828 atatcc--aaaaaatatgtatttttagttaagaaccataagaaaagtacctaaggaattgtacc 21259889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 334 - 495
Target Start/End: Complemental strand, 12808084 - 12807925
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||| ||||| ||| |||||||||||||  |  |||||||||| ||||| |||||||| |||||||||| || |||||||||||||| ||||||||||||    
T  12808084 aaggtgaaaacttaggtacaattccttaagtgtttttcgtatgattcttgactaaattcaccatgatttccttaaatccataattttttcaaagtttgtt 12807985  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgta 495  Q
    |||||         |||||| |||||||||| |||||| ||||||||||||||| |||||||    
T  12807984 atatc--taaaaaatatgtatttttagttaaaaaccatacgaaaaacacctaagaaattgta 12807925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 486
Target Start/End: Complemental strand, 12744999 - 12744849
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||| ||||| ||| |||||||||||||| |  |||||||||| || || |||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  12744999 aaggtgaaaacttaggtacaattccttaggtgtttttcgtatgatttttgactaaattcaccatgatttcctcaaattcataattttctcaaagtttgtt 12744900  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaa 486  Q
    ||||||        |||||| |||||||||| |||||| | ||||||||||||    
T  12744899 atatcc--aaaaaatatgtatttttagttaaaaaccatacaaaaaacacctaa 12744849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 340 - 439
Target Start/End: Complemental strand, 19976429 - 19976330
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||| |||||||||||||| | |||||||||| ||| || | ||||||||||||||||| ||||||||||||||||||||||||||| | ||||||    
T  19976429 aaaatttaggtacaattccttaggtgcttttcgtatagttattgattaaatttaccatgatttcctcaaatccataattttctcaaagtttatcatatcc 19976330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 350 - 478
Target Start/End: Complemental strand, 21262100 - 21261974
Alignment:
Q  350 tacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnnta 449  Q
    |||||||||||||   ||||| |||||||||||||||||||| | |||||||| |||||||||| |||||||||||||||||||||||||        ||    
T  21262100 tacaattccttagcagctttttgtatggttcttaactaaattcatcatgatttcctcaaatccacaattttctcaaagtttgttatatcc--aaaaaata 21262003  T
Q  450 tgtacttttagttaagaaccatgcgaaaa 478  Q
    |||| ||||||||||||||||| ||||||    
T  21262002 tgtatttttagttaagaaccatacgaaaa 21261974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 340 - 438
Target Start/End: Original strand, 32623219 - 32623317
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    |||| ||| |||||||||||||| |  ||||||||||||||||||||||||| || |||||||    ||||||||||||||||||||||||||||||||    
T  32623219 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcactatgatttctgtaaatccataattttctcaaagtttgttatatc 32623317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 334 - 437
Target Start/End: Original strand, 780792 - 780895
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||| |||||||||| | |||||||||||  |||| | |||||| |||||||||| || |||||||||||||||| ||||||||||    
T  780792 aaggagaaaagttaggtagaattccttagattcttttcgtatgactcttgattaaattcaccatgatttccttaaatccataattttcttaaagtttgtt 780891  T
Q  434 atat 437  Q
    ||||    
T  780892 atat 780895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 21591213 - 21591300
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctc 423  Q
    |||||||| ||| |||||||||||||  | |||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||    
T  21591213 ggagaaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21591300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 21595330 - 21595417
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctc 423  Q
    |||||||| ||| |||||||||||||  | |||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||    
T  21595330 ggagaaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21595417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 349 - 439
Target Start/End: Original strand, 1456035 - 1456125
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||||||||  | |||||  |||||||| |||||||||| ||  | |||||||||||||||||||||||||||||||||||||||||    
T  1456035 gtacaattccttacctgctttttatatggttcataactaaattcactgtaattttctcaaatccataattttctcaaagtttgttatatcc 1456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 334 - 436
Target Start/End: Original strand, 37552306 - 37552408
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| ||||||||| ||   | ||||| ||| |||||||||||||||| ||||||| || ||||||| ||||||||||||||||||||||    
T  37552306 aaggagaaaacttaggtacaattcattccgtgctttttgtacggttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgtt 37552405  T
Q  434 ata 436  Q
    |||    
T  37552406 ata 37552408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 35276323 - 35276394
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatc 438  Q
    |||| ||||||||  |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  35276323 tttttgtatggtttataactaaatttaccatgattttatcaaatccataattttcttaaagtttattatatc 35276394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 37655182 - 37655252
Alignment:
Q  366 cttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||| ||| |||||||||||||||| ||||||| || ||||||| |||||||||||||||||||||||||    
T  37655182 ctttttgtacggttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttata 37655252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 497
Target Start/End: Original strand, 8364668 - 8364789
Alignment:
Q  374 atggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgc 473  Q
    |||||||||||||||||| ||||||||||||| ||||  |||||| |||||||||||||||| ||         ||  || ||||||||||||||||| |    
T  8364668 atggttcttaactaaattcaccatgattttcttaaatttataattctctcaaagtttgttatgtctaaaaaaatta--tatttttagttaagaaccatac 8364765  T
Q  474 gaaaaacacctaaggaattgtacc 497  Q
     |||| ||||||||||||||||||    
T  8364766 aaaaagcacctaaggaattgtacc 8364789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 439
Target Start/End: Complemental strand, 18236608 - 18236536
Alignment:
Q  367 ttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||||||||||||||||||||   | ||||||||| |||| ||||||||| ||||||||||||||||||    
T  18236608 ttttcgtatggttcttaactaaattcgtcgtgattttcttaaatacataattttttcaaagtttgttatatcc 18236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 496
Target Start/End: Complemental strand, 35807102 - 35806948
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    |||||||| ||| |||| ||||| |  |||| |||||||||| | ||||||| |||||||||||||||||||  ||||||| | |||||||||||||| |    
T  35807102 aaaatttaggtaaaatttcttagatgatttttgtatggttctaacctaaattcaccatgattttctcaaatctttaatttttttaaagtttgttatattc 35807003  T
Q  440 nnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
             ||||| |||||||||||||||||  ||||| ||||||| |||||||||    
T  35807002 aaaaaag--atgtatttttagttaagaaccatatgaaaagcacctaaagaattgtac 35806948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 21259902 - 21259848
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  21259902 aggagaaaatttaggtacaattccttaggtacttttcttatggttcttaactaaa 21259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 420
Target Start/End: Complemental strand, 28056245 - 28056179
Alignment:
Q  354 attccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataatttt 420  Q
    ||||||| | || |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  28056245 attcctttggtattttttgtatggttcttaactaaatttatcatgattttcttaaatccataatttt 28056179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 2529139 - 2529066
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttct 422  Q
    |||||||| ||||| | |||||||| ||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  2529139 gtacaatttcttaggtgcttttcgtgtggttcttaactaaattcaccgtgatttccttaaatccataattttct 2529066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 15855841 - 15855896
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  15855841 aaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 15855896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 35420785 - 35420730
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  35420785 aaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 35420730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 386 - 497
Target Start/End: Original strand, 1164845 - 1164955
Alignment:
Q  386 taaatttaccatgattttctcaaatccataattttctcaaagtttgttatatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacaccta 485  Q
    |||||||||||||||||| | |||||||||||||| | ||||||| ||||||||        ||| || ||||| ||||||||||| |||||| || |||    
T  1164845 taaatttaccatgatttttttaaatccataattttttaaaagtttattatatcc-aaaaaaatatttatttttaattaagaaccatacgaaaagcagcta 1164943  T
Q  486 aggaattgtacc 497  Q
    ||||||||||||    
T  1164944 aggaattgtacc 1164955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 1164967 - 1164914
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||||| ||||    
T  1164967 ggagaaaatttaggtacaattccttagctgcttttcgtatggttcttaattaaa 1164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 4266100 - 4266141
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  4266100 tttagttaagaaccatacgaaaaacacctaaggaattgtacc 4266141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 32623268 - 32623227
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  32623268 tttagttaagaaccatacgaaaaacacctaaggaattgtacc 32623227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 24397415 - 24397364
Alignment:
Q  338 agaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  24397415 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 24397364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 33629520 - 33629465
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| |||||||||||||| |  |||||||||| ||||||||||||    
T  33629520 aaggagaaaatttaggtacaattccttagatgtttttcgtatgattcttaactaaa 33629465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 35806933 - 35806988
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||| |||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  35806933 aaggacaaaatttaagtacaattctttaggtgcttttcatatggttcttaactaaa 35806988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 16472954 - 16473008
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||| |||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  16472954 aggaaaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 16473008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 13754462 - 13754409
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||| |||||||| ||||| |  |||||||||||||||||||||||    
T  13754462 ggagaaaatttatgtacaattacttaggtgtttttcgtatggttcttaactaaa 13754409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 20476549 - 20476590
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  20476549 tttagttaagaaccatacgaaaagcacctaaggaattgtacc 20476590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 43539225 - 43539266
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  43539225 tttagttaaggaccatacgaaaaacacctaaggaattgtacc 43539266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 429
Target Start/End: Original strand, 1384373 - 1384421
Alignment:
Q  381 ttaactaaatttaccatgattttctcaaatccataattttctcaaagtt 429  Q
    |||||||||||||  ||||||| |||||||| |||||||||||||||||    
T  1384373 ttaactaaatttattatgatttcctcaaatctataattttctcaaagtt 1384421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 2538507 - 2538467
Alignment:
Q  396 atgattttctcaaatccataattttctcaaagtttgttata 436  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  2538507 atgattttttcaaatccataattttctcagagtttgttata 2538467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 4265980 - 4266035
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||| ||||| |  |||||||||||||||||||||||    
T  4265980 aaggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaa 4266035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 20476429 - 20476484
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||  ||| | ||||||||||||||||||||||||    
T  20476429 aaggagaaaacttaggtacaattctctagatgcttttcgtatggttcttaactaaa 20476484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 514
Target Start/End: Complemental strand, 35420666 - 35420608
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    ||||||||||||||||| |||||| || ||||||||||||| |||||| ||||| |||||    
T  35420666 ttttagttaagaaccatacgaaaagcatctaaggaattgta-cctaagttttctcctttt 35420608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 1138558 - 1138612
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| ||| ||||||||| || | | ||||||||||||||||||||||||    
T  1138558 aggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 1138612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 436
Target Start/End: Original strand, 12257580 - 12257614
Alignment:
Q  402 ttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||||||||||||||| |||||||||||||||    
T  12257580 ttctcaaatccataattttttcaaagtttgttata 12257614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 497
Target Start/End: Original strand, 15855960 - 15856002
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  15855960 ttttagttaagaaccatacgaaaagcatctaaggaattgtacc 15856002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 497
Target Start/End: Original strand, 16473072 - 16473114
Alignment:
Q  455 ttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  16473072 ttttagttaagaaccatacgaaaagcatctaaggaattgtacc 16473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 409
Target Start/End: Complemental strand, 2268776 - 2268703
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaa 409  Q
    |||||||| ||| ||| |||| ||||| | ||||| |||||||||||||||||||| ||  |||||| ||||||    
T  2268776 ggagaaaacttaggtataatttcttagatgctttttgtatggttcttaactaaattcactgtgatttcctcaaa 2268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 8364797 - 8364748
Alignment:
Q  340 aaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||| ||| |||||||||||||| | ||||| ||||||||||||||||||    
T  8364797 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 8364748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 13754344 - 13754303
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||||||||| ||| |||||||||| ||||||||||||||    
T  13754344 tttagttaagaatcatacgaaaaacacataaggaattgtacc 13754303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 437
Target Start/End: Complemental strand, 735378 - 735346
Alignment:
Q  405 tcaaatccataattttctcaaagtttgttatat 437  Q
    |||||| ||||||||||||||||||||||||||    
T  735378 tcaaattcataattttctcaaagtttgttatat 735346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 4913267 - 4913307
Alignment:
Q  456 tttagttaagaaccatgcgaaaaacacctaaggaattgtac 496  Q
    |||||||||||||||| | ||||||||||||| ||||||||    
T  4913267 tttagttaagaaccatacaaaaaacacctaagaaattgtac 4913307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 489
Target Start/End: Original strand, 10499947 - 10499979
Alignment:
Q  457 ttagttaagaaccatgcgaaaaacacctaagga 489  Q
    ||||||||||||||| |||||||||||||||||    
T  10499947 ttagttaagaaccatacgaaaaacacctaagga 10499979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 334 - 514
Target Start/End: Complemental strand, 51236 - 51059
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||| ||| |||||||||||||| |||||||| ||||||||||||||||||| || ||||||| || |||| ||||||||||||||||||||||    
T  51236 aaggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttccttaaattcataattttctcaaagtttgtt 51137  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    ||||||        ||| || ||||||||||||||||| ||||||  ||||||||||||||| |||||| ||||| |||||    
T  51136 atatcc--aaaaaatatatatttttagttaagaaccatacgaaaaggacctaaggaattgta-cctaagttttctcctttt 51059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 51061 - 51116
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | ||||||||||||||||||||||||    
T  51061 aaggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 51116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 334 - 514
Target Start/End: Complemental strand, 10288 - 10112
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||||||| |||||||| ||||  | ||||||||||  ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  10288 aaggagaaaatttaggtacaatttcttatgtgcttttcgtataattcttaagtaaattcaccatgattttctcacatccataattttctcaaagtttgtt 10189  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtaccctaagctttcttctttt 514  Q
    ||||||        ||| || ||||||||||||||||| || ||||||||||||||||| || |||||| ||||| |||||    
T  10188 atatcc---aaaaatatatatttttagttaagaaccatacgcaaaacacctaaggaattata-cctaagttttctactttt 10112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 337 - 439
Target Start/End: Complemental strand, 48296 - 48194
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| |||  ||||||||||||| | |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48296 gagaaaacttagatacaattccttagatgcttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttata 48197  T
Q  437 tcc 439  Q
    |||    
T  48196 tcc 48194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 334 - 497
Target Start/End: Original strand, 1937 - 2099
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgtt 433  Q
    |||||||||||||| ||| ||||  |||| | ||||| |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  1937 aaggagaaaatttaggtataattgtttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgtt 2036  T
Q  434 atatccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||| |        || ||| |||||||||||||||||   |||| ||||||||||||||||||    
T  2037 atat-ctaaaaaaatacgtatttttagttaagaaccatataaaaagcacctaaggaattgtacc 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 2111 - 2058
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||| ||| |||||||||||||| | |||||  |||||||||||||||||    
T  2111 ggagaaaacttaggtacaattccttaggtgctttttatatggttcttaactaaa 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 337 - 497
Target Start/End: Complemental strand, 14612 - 14454
Alignment:
Q  337 gagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttata 436  Q
    ||||||| ||| |||||||||||| | | |||||||||| ||||||||||||||| ||||| | ||  ||| |||||||||||||||||||| |||||||    
T  14612 gagaaaacttaggtacaattccttgggtgcttttcgtatcgttcttaactaaattcaccattacttcgtcatatccataattttctcaaagtctgttata 14513  T
Q  437 tccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||        |||||| ||||||||||| |||||  |||||||||||||| |||||||||    
T  14512 tcc--aaataatatgtatttttagttaagtaccataggaaaaacacctaagaaattgtacc 14454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 497
Target Start/End: Original strand, 3393 - 3552
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttat 435  Q
    |||||||| ||| ||||||||| || | | ||||| ||||||||||||| |||||| |||||||||| |||||||  |||||||| ||||||||||||||    
T  3393 ggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttat 3492  T
Q  436 atccnnnnnnnntatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    ||||        |||||| ||||| ||||||||||| ||||||  |||||| ||||||||||    
T  3493 atcc--aaaaaatatgtatttttatttaagaaccatacgaaaagtacctaaagaattgtacc 3552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 3566 - 3511
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||    
T  3566 aaggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 3511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 439
Target Start/End: Complemental strand, 94306 - 94240
Alignment:
Q  373 tatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  94306 tatggttcttaactaaattcaccatgattttatcaaatccaaaattttctcatagtttgttatatcc 94240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 334 - 415
Target Start/End: Complemental strand, 5880 - 5797
Alignment:
Q  334 aaggagaaaatttaagtacaatt--ccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccata 415  Q
    |||||||||| ||| ||||||||  |||||| | |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  5880 aaggagaaaacttaggtacaattttccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccata 5797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 497
Target Start/End: Complemental strand, 5762 - 5713
Alignment:
Q  448 tatgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||||| ||||||||||||||||| |||||| ||||||| ||||||||||    
T  5762 tatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtacc 5713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 5700 - 5754
Alignment:
Q  335 aggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    ||||||||| | | ||||||||| |||| | ||||||||||||||||||||||||    
T  5700 aggagaaaactaaggtacaattctttaggtgcttttcgtatggttcttaactaaa 5754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 349 - 439
Target Start/End: Original strand, 138290 - 138380
Alignment:
Q  349 gtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctcaaatccataattttctcaaagtttgttatatcc 439  Q
    ||||||||||||||   ||||||||||| |||||||||||||| | ||||||||||| ||||||||| |||| | ||||||| ||||||||    
T  138290 gtacaattccttaggagcttttcgtatgattcttaactaaattcatcatgattttcttaaatccatattttttttaaagtttattatatcc 138380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 26403 - 26458
Alignment:
Q  334 aaggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaa 389  Q
    |||||||||| ||| |||||||||||||| | |||||||||||||| |||||||||    
T  26403 aaggagaaaacttaggtacaattccttaggtgcttttcgtatggttattaactaaa 26458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 497
Target Start/End: Complemental strand, 26464 - 26417
Alignment:
Q  450 tgtacttttagttaagaaccatgcgaaaaacacctaaggaattgtacc 497  Q
    |||| |||||||||| |||||| |||||| ||||||||||||||||||    
T  26464 tgtatttttagttaataaccatacgaaaagcacctaaggaattgtacc 26417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 72288 - 72359
Alignment:
Q  336 ggagaaaatttaagtacaattccttagttacttttcgtatggttcttaactaaatttaccatgattttctca 407  Q
    ||||| || ||| |||||||||||||| | ||||| ||||| |||||| ||||||| ||||| |||||||||    
T  72288 ggagagaacttaggtacaattccttagatgctttttgtatgattcttagctaaattcaccataattttctca 72359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 402
Target Start/End: Original strand, 90738 - 90767
Alignment:
Q  373 tatggttcttaactaaatttaccatgattt 402  Q
    ||||||||||||||||||||||||||||||    
T  90738 tatggttcttaactaaatttaccatgattt 90767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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