View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0226-INSERTION-4 (Length: 265)
Name: NF0226-INSERTION-4
Description: NF0226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0226-INSERTION-4
Alignment Details
Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 92 - 239
Target Start/End: Complemental strand, 666951 - 666803
Alignment:
Q
92
ccctatgattttaatcatataaacttataaagtataagtaaaaaatgcatcttgtcaaacatagtcataatgctaacacgtttgcatatacaaatcagtc
191
Q
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
T
666951
ccctatgattttaatcatatgaacttataaagtataagtaaaaaatgtatcttgtcaaacatagtcataatgctaacacgtttgcatatacagatcagtc
666852
T
Q
192
aacaagtgatggcaaagttcagt-catttccctttcaaataaaaaattc
239
Q
||||||| ||||||||||||||| |||||||||||||||||||||||||
T
666851
aacaagtaatggcaaagttcagtccatttccctttcaaataaaaaattc
666803
T
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