View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0226_low_34 (Length: 277)
Name: NF0226_low_34
Description: NF0226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0226_low_34
Alignment Details
Target: chr4 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 19344762 - 19344918
Alignment:
Q
91
attacttcccataaatgatgatttatcactcctgtttttggttaaacatatatagcattatggcattgaataggatgatggagttgaagttagacacggg
190
Q
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
19344762
attacttcccataattgatgatttatcactcctgtttttggttaaacatatatagcattatggcattgaataggatgatggagttgaagttagacacggg
19344861
T
Q
191
gcattaggtcttcgacagctggggatagcagcgacacactgtaaacttgagcctatg
247
Q
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
T
19344862
gcattaggtcttcggcagctggggatagcagcgacacactgtaaacttgagcctatg
19344918
T
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