View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0226_low_37 (Length: 269)
Name: NF0226_low_37
Description: NF0226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0226_low_37
Alignment Details
Target: chr7 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 6352053 - 6351924
Alignment:
Q
53
ggtaaatcacatcgattacatactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccctactcctgagccat
152
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
6352053
ggtaaatcacatcgattacatactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccctactcctgagccat
6351954
T
Q
153
cacattttagctacacctttgtatattctt
182
Q
|||||||||| |||||||||||||||||||
T
6351953
cacattttagttacacctttgtatattctt
6351924
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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