View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0226_low_40 (Length: 265)
Name: NF0226_low_40
Description: NF0226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0226_low_40
Alignment Details
Target: chr7 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 74 - 203
Target Start/End: Original strand, 6351924 - 6352053
Alignment:
Q
74
aagaatatacaaaggtgtagctaaaatgtgatggctcaggagtagggctccgtaattttgtgtgaattacttcaaataatttagaatgaatagtaatgga
173
Q
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
6351924
aagaatatacaaaggtgtaactaaaatgtgatggctcaggagtagggctccgtaattttgtgtgaattacttcaaataatttagaatgaatagtaatgga
6352023
T
Q
174
aagtggagtatgtaatcgatgtgatttacc
203
Q
||||||||||||||||||||||||||||||
T
6352024
aagtggagtatgtaatcgatgtgatttacc
6352053
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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