View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0227-INSERTION-17 (Length: 89)
Name: NF0227-INSERTION-17
Description: NF0227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0227-INSERTION-17 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 74; Significance: 1e-34; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-34
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 5674332 - 5674251
Alignment:
| Q |
8 |
gaaataccggcaataactcatcaacaagagcctctttccattggaacaacggtcttcaccatactatgccagttgctcaaga |
89 |
Q |
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| T |
5674332 |
gaaataccggcaataactcatcaacaagagcctcttcccattggaacaacggtcttcaccatactatgccaattgctcaaga |
5674251 |
T |
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