View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0227-INSERTION-7 (Length: 636)

Name: NF0227-INSERTION-7
Description: NF0227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0227-INSERTION-7
NF0227-INSERTION-7
[»] chr7 (27 HSPs)
chr7 (6-376)||(49018472-49018859)
chr7 (264-371)||(12936017-12936123)
chr7 (579-636)||(47250674-47250731)
chr7 (580-636)||(38842234-38842290)
chr7 (579-632)||(18731136-18731189)
chr7 (579-636)||(43726454-43726511)
chr7 (580-636)||(2357185-2357241)
chr7 (579-636)||(8769399-8769456)
chr7 (579-636)||(21522430-21522487)
chr7 (281-371)||(33105918-33106009)
chr7 (579-635)||(10625200-10625256)
chr7 (584-636)||(32706944-32706996)
chr7 (580-636)||(35085857-35085913)
chr7 (497-560)||(38281150-38281213)
chr7 (579-636)||(5238568-5238625)
chr7 (579-636)||(9230889-9230946)
chr7 (579-635)||(34568796-34568853)
chr7 (579-636)||(47251015-47251071)
chr7 (579-636)||(47305244-47305301)
chr7 (581-632)||(26920133-26920184)
chr7 (581-623)||(473308-473350)
chr7 (581-623)||(23472712-23472754)
chr7 (579-621)||(28349608-28349650)
chr7 (579-636)||(23437364-23437421)
chr7 (579-612)||(31715858-31715891)
chr7 (579-623)||(31715750-31715794)
chr7 (580-636)||(44448125-44448180)
[»] chr2 (53 HSPs)
chr2 (380-636)||(14877689-14877949)
chr2 (468-559)||(16604341-16604432)
chr2 (579-636)||(34820491-34820548)
chr2 (579-636)||(39149961-39150018)
chr2 (582-636)||(16655818-16655872)
chr2 (579-636)||(13354294-13354351)
chr2 (579-636)||(28203072-28203129)
chr2 (579-636)||(32933708-32933765)
chr2 (579-636)||(38275667-38275724)
chr2 (579-636)||(39454654-39454711)
chr2 (579-636)||(43183795-43183852)
chr2 (579-636)||(44915856-44915913)
chr2 (580-636)||(16260988-16261044)
chr2 (580-636)||(25642386-25642442)
chr2 (579-636)||(5921598-5921655)
chr2 (583-636)||(11943704-11943757)
chr2 (579-636)||(12303997-12304054)
chr2 (579-636)||(12304366-12304423)
chr2 (579-636)||(21470507-21470564)
chr2 (579-636)||(27132722-27132779)
chr2 (579-636)||(27883585-27883642)
chr2 (579-636)||(28631486-28631543)
chr2 (579-636)||(33819513-33819570)
chr2 (579-636)||(34127777-34127834)
chr2 (580-636)||(5961787-5961843)
chr2 (581-636)||(10833246-10833302)
chr2 (579-623)||(27883682-27883726)
chr2 (580-636)||(36211468-36211524)
chr2 (579-623)||(38275594-38275638)
chr2 (580-635)||(20908724-20908779)
chr2 (580-635)||(27246196-27246251)
chr2 (580-623)||(31450891-31450934)
chr2 (585-636)||(32503669-32503720)
chr2 (580-635)||(36442347-36442402)
chr2 (585-636)||(44612606-44612657)
chr2 (579-621)||(4104386-4104428)
chr2 (582-632)||(15136934-15136984)
chr2 (582-636)||(16736221-16736275)
chr2 (478-564)||(37048655-37048741)
chr2 (579-621)||(41377581-41377623)
chr2 (579-624)||(15137028-15137073)
chr2 (579-624)||(16655723-16655768)
chr2 (579-612)||(18565183-18565216)
chr2 (579-636)||(27476484-27476541)
chr2 (579-612)||(35408757-35408790)
chr2 (579-623)||(17856316-17856360)
chr2 (579-623)||(28202977-28203021)
chr2 (579-623)||(37744613-37744657)
chr2 (579-623)||(40694400-40694444)
chr2 (579-623)||(41377471-41377515)
chr2 (579-623)||(41659862-41659906)
chr2 (580-612)||(41659972-41660004)
chr2 (579-623)||(44612708-44612752)
[»] chr6 (28 HSPs)
chr6 (263-378)||(12084441-12084557)
chr6 (580-636)||(31029736-31029792)
chr6 (468-557)||(10456562-10456651)
chr6 (579-636)||(13156051-13156108)
chr6 (579-636)||(13160907-13160964)
chr6 (579-636)||(14337019-14337076)
chr6 (579-636)||(29999530-29999587)
chr6 (579-636)||(33544939-33544996)
chr6 (580-636)||(33329418-33329474)
chr6 (580-636)||(35132719-35132775)
chr6 (579-634)||(24605088-24605143)
chr6 (580-634)||(7537819-7537873)
chr6 (579-636)||(1158803-1158860)
chr6 (579-636)||(6220173-6220230)
chr6 (579-636)||(12903423-12903480)
chr6 (579-636)||(24548358-24548415)
chr6 (579-623)||(24548466-24548510)
chr6 (580-635)||(9174019-9174074)
chr6 (582-636)||(2949411-2949465)
chr6 (594-636)||(11524898-11524940)
chr6 (580-621)||(1158708-1158749)
chr6 (580-621)||(25551563-25551604)
chr6 (579-623)||(11524991-11525035)
chr6 (579-623)||(12903338-12903382)
chr6 (579-623)||(14337127-14337171)
chr6 (579-623)||(24604991-24605035)
chr6 (579-623)||(29010071-29010115)
chr6 (579-636)||(33972321-33972380)
[»] chr4 (42 HSPs)
chr4 (266-370)||(27897448-27897551)
chr4 (579-634)||(53645568-53645623)
chr4 (579-632)||(4966084-4966137)
chr4 (579-636)||(12381266-12381323)
chr4 (579-636)||(24504057-24504114)
chr4 (579-636)||(33626076-33626133)
chr4 (579-636)||(43316996-43317053)
chr4 (579-636)||(43969739-43969796)
chr4 (579-636)||(45911696-45911753)
chr4 (580-636)||(25218202-25218258)
chr4 (581-636)||(1205589-1205644)
chr4 (581-636)||(27347809-27347864)
chr4 (270-336)||(29711981-29712048)
chr4 (579-636)||(44432836-44432893)
chr4 (579-636)||(46621139-46621196)
chr4 (580-636)||(21218059-21218115)
chr4 (580-636)||(29864294-29864350)
chr4 (580-636)||(44710521-44710577)
chr4 (580-636)||(45683235-45683291)
chr4 (580-623)||(8751405-8751448)
chr4 (501-560)||(28534696-28534755)
chr4 (579-632)||(8246884-8246937)
chr4 (579-636)||(54136208-54136265)
chr4 (580-636)||(1157324-1157380)
chr4 (579-623)||(25218309-25218353)
chr4 (579-623)||(45911799-45911843)
chr4 (512-552)||(46608127-46608167)
chr4 (580-624)||(54191706-54191750)
chr4 (580-635)||(40067466-40067521)
chr4 (579-618)||(42779637-42779676)
chr4 (580-635)||(46535735-46535790)
chr4 (586-636)||(4793723-4793773)
chr4 (579-636)||(9010622-9010679)
chr4 (579-636)||(29970404-29970461)
chr4 (580-621)||(32384771-32384812)
chr4 (579-636)||(34958948-34959005)
chr4 (579-623)||(10014689-10014733)
chr4 (579-623)||(10021830-10021874)
chr4 (579-623)||(25058950-25058994)
chr4 (579-623)||(25593316-25593360)
chr4 (579-623)||(40067573-40067617)
chr4 (579-623)||(44428688-44428732)
[»] chr8 (47 HSPs)
chr8 (264-336)||(32448395-32448467)
chr8 (579-636)||(3869161-3869218)
chr8 (579-636)||(14920528-14920585)
chr8 (579-636)||(36344078-36344135)
chr8 (579-636)||(39912034-39912091)
chr8 (270-336)||(27267092-27267158)
chr8 (579-636)||(119233-119290)
chr8 (579-636)||(23244727-23244784)
chr8 (579-636)||(29027184-29027241)
chr8 (579-636)||(31230730-31230787)
chr8 (579-636)||(35223979-35224036)
chr8 (580-635)||(5416930-5416985)
chr8 (495-557)||(7445896-7445958)
chr8 (579-636)||(40094687-40094744)
chr8 (270-369)||(6580333-6580431)
chr8 (499-559)||(24570392-24570452)
chr8 (580-636)||(33542502-33542558)
chr8 (581-636)||(12873260-12873315)
chr8 (579-636)||(7041841-7041898)
chr8 (579-636)||(8654148-8654205)
chr8 (579-636)||(9495235-9495292)
chr8 (579-636)||(11639263-11639319)
chr8 (579-636)||(18621959-18622016)
chr8 (579-636)||(26736337-26736394)
chr8 (579-636)||(39240147-39240204)
chr8 (579-623)||(18017907-18017951)
chr8 (579-623)||(18018011-18018055)
chr8 (580-636)||(18914378-18914434)
chr8 (579-635)||(37393594-37393650)
chr8 (585-636)||(6843698-6843749)
chr8 (579-636)||(1825926-1825983)
chr8 (579-636)||(1860371-1860428)
chr8 (579-612)||(9495149-9495182)
chr8 (579-612)||(18914487-18914520)
chr8 (579-636)||(21515412-21515469)
chr8 (579-624)||(26217186-26217231)
chr8 (579-636)||(30568488-30568545)
chr8 (579-623)||(8654053-8654097)
chr8 (579-623)||(16645662-16645706)
chr8 (579-615)||(21515328-21515364)
chr8 (579-623)||(24456877-24456921)
chr8 (579-623)||(31230838-31230882)
chr8 (579-623)||(35223891-35223935)
chr8 (580-627)||(35486086-35486131)
chr8 (579-623)||(40040279-40040323)
chr8 (579-623)||(40094592-40094636)
chr8 (579-623)||(44254982-44255026)
[»] chr3 (51 HSPs)
chr3 (579-636)||(7742977-7743034)
chr3 (579-636)||(9028403-9028460)
chr3 (579-636)||(15862387-15862444)
chr3 (579-636)||(28688202-28688259)
chr3 (580-636)||(35753643-35753699)
chr3 (580-636)||(54247380-54247436)
chr3 (497-559)||(31116439-31116501)
chr3 (579-636)||(7937775-7937832)
chr3 (579-636)||(8846193-8846250)
chr3 (579-636)||(12123207-12123264)
chr3 (579-636)||(14353260-14353317)
chr3 (579-636)||(34521383-34521440)
chr3 (579-636)||(40639234-40639291)
chr3 (579-636)||(40926128-40926185)
chr3 (579-636)||(41998031-41998088)
chr3 (579-636)||(45171185-45171242)
chr3 (579-636)||(47891725-47891782)
chr3 (581-636)||(49222239-49222294)
chr3 (580-635)||(52606331-52606386)
chr3 (582-636)||(2829528-2829582)
chr3 (579-636)||(10756919-10756977)
chr3 (581-635)||(44069336-44069390)
chr3 (583-636)||(40969376-40969429)
chr3 (579-636)||(41208518-41208575)
chr3 (579-636)||(43899286-43899343)
chr3 (579-636)||(53678645-53678702)
chr3 (580-636)||(2078684-2078740)
chr3 (581-636)||(29248438-29248491)
chr3 (580-636)||(31513981-31514037)
chr3 (579-623)||(53841251-53841295)
chr3 (579-622)||(5348696-5348739)
chr3 (581-636)||(22444398-22444453)
chr3 (580-623)||(50819442-50819485)
chr3 (580-623)||(50856379-50856422)
chr3 (580-623)||(54081401-54081444)
chr3 (586-636)||(4846719-4846769)
chr3 (579-636)||(52268220-52268278)
chr3 (579-636)||(17102501-17102558)
chr3 (580-621)||(19124307-19124348)
chr3 (579-612)||(19124408-19124441)
chr3 (579-636)||(26332530-26332587)
chr3 (579-636)||(54081495-54081552)
chr3 (579-623)||(4846821-4846865)
chr3 (579-623)||(7950392-7950436)
chr3 (579-623)||(8846301-8846345)
chr3 (579-623)||(9028308-9028352)
chr3 (579-635)||(21169783-21169839)
chr3 (579-623)||(40410829-40410873)
chr3 (579-623)||(45171292-45171336)
chr3 (579-623)||(46766740-46766784)
chr3 (579-623)||(51311707-51311751)
[»] chr1 (61 HSPs)
chr1 (579-636)||(30293130-30293187)
chr1 (581-636)||(52412810-52412865)
chr1 (579-636)||(11787857-11787914)
chr1 (579-636)||(21385053-21385110)
chr1 (579-636)||(24590437-24590494)
chr1 (579-636)||(29257035-29257092)
chr1 (579-636)||(37199133-37199190)
chr1 (579-636)||(50921177-50921234)
chr1 (580-636)||(10923575-10923631)
chr1 (580-632)||(11787957-11788009)
chr1 (580-636)||(24655704-24655760)
chr1 (580-636)||(35986350-35986406)
chr1 (581-636)||(30611339-30611394)
chr1 (579-636)||(18793808-18793866)
chr1 (579-629)||(40534042-40534092)
chr1 (579-636)||(10654241-10654298)
chr1 (579-636)||(16267832-16267889)
chr1 (579-636)||(30792652-30792709)
chr1 (579-636)||(31126141-31126198)
chr1 (579-636)||(34028838-34028895)
chr1 (580-636)||(5463330-5463386)
chr1 (580-636)||(13831234-13831290)
chr1 (579-623)||(14118647-14118691)
chr1 (580-636)||(21036103-21036159)
chr1 (166-206)||(29684352-29684392)
chr1 (580-636)||(49291195-49291251)
chr1 (580-636)||(51810350-51810406)
chr1 (581-636)||(4045311-4045366)
chr1 (581-636)||(6181828-6181883)
chr1 (579-629)||(23281229-23281279)
chr1 (580-626)||(50574739-50574785)
chr1 (579-636)||(9119409-9119466)
chr1 (579-636)||(14775947-14776004)
chr1 (579-636)||(19986334-19986391)
chr1 (579-636)||(36657618-36657675)
chr1 (579-636)||(40703077-40703134)
chr1 (580-636)||(20260591-20260647)
chr1 (579-635)||(25088229-25088285)
chr1 (579-635)||(32564163-32564219)
chr1 (579-623)||(33753342-33753386)
chr1 (581-629)||(34621740-34621788)
chr1 (579-636)||(22584563-22584621)
chr1 (580-622)||(24590344-24590386)
chr1 (594-636)||(36884847-36884889)
chr1 (579-636)||(3569494-3569551)
chr1 (579-636)||(19886099-19886156)
chr1 (581-622)||(36657727-36657768)
chr1 (579-636)||(45305622-45305679)
chr1 (501-558)||(48259060-48259117)
chr1 (579-620)||(51692099-51692140)
chr1 (579-623)||(1831889-1831933)
chr1 (579-623)||(6181733-6181777)
chr1 (579-623)||(11394885-11394929)
chr1 (579-623)||(14775862-14775906)
chr1 (579-619)||(28112867-28112907)
chr1 (580-612)||(29256950-29256982)
chr1 (579-623)||(34028946-34028990)
chr1 (579-623)||(42607727-42607771)
chr1 (579-623)||(46738949-46738993)
chr1 (579-623)||(46949961-46950005)
chr1 (579-623)||(49291110-49291154)
[»] chr5 (44 HSPs)
chr5 (273-336)||(21837407-21837470)
chr5 (579-636)||(7210573-7210630)
chr5 (579-636)||(31656570-31656627)
chr5 (580-636)||(10656306-10656362)
chr5 (580-636)||(40589775-40589831)
chr5 (581-636)||(334415-334470)
chr5 (581-636)||(12593575-12593630)
chr5 (579-632)||(19205060-19205113)
chr5 (579-636)||(31909047-31909104)
chr5 (579-636)||(33763022-33763079)
chr5 (579-636)||(38416346-38416403)
chr5 (166-206)||(8344757-8344797)
chr5 (580-636)||(25923236-25923292)
chr5 (580-636)||(39706263-39706319)
chr5 (580-636)||(40589172-40589228)
chr5 (166-206)||(42824844-42824884)
chr5 (166-217)||(22913656-22913707)
chr5 (581-636)||(43569889-43569944)
chr5 (579-632)||(3878598-3878651)
chr5 (582-635)||(5088020-5088073)
chr5 (579-636)||(17861155-17861212)
chr5 (579-636)||(35263611-35263668)
chr5 (579-636)||(40774549-40774606)
chr5 (579-636)||(41859889-41859946)
chr5 (580-636)||(8418398-8418452)
chr5 (581-621)||(15670378-15670418)
chr5 (579-623)||(39706168-39706212)
chr5 (269-311)||(4807753-4807795)
chr5 (497-559)||(32584311-32584373)
chr5 (579-621)||(41859794-41859836)
chr5 (579-636)||(9693035-9693092)
chr5 (579-636)||(15476471-15476528)
chr5 (580-621)||(16353381-16353422)
chr5 (579-612)||(26289137-26289170)
chr5 (579-623)||(5087924-5087968)
chr5 (580-636)||(5152734-5152790)
chr5 (579-635)||(5624496-5624552)
chr5 (579-623)||(7210670-7210714)
chr5 (579-623)||(12593681-12593725)
chr5 (579-623)||(14143625-14143669)
chr5 (579-623)||(16353271-16353315)
chr5 (579-623)||(36752019-36752063)
chr5 (579-623)||(40774454-40774498)
chr5 (579-611)||(42710587-42710619)
[»] scaffold0051 (1 HSPs)
scaffold0051 (579-636)||(40564-40621)
[»] scaffold0012 (1 HSPs)
scaffold0012 (579-636)||(177277-177334)
[»] scaffold0128 (1 HSPs)
scaffold0128 (579-632)||(45052-45105)
[»] scaffold0045 (2 HSPs)
scaffold0045 (579-635)||(65856-65912)
scaffold0045 (579-635)||(73188-73244)
[»] scaffold0236 (2 HSPs)
scaffold0236 (581-632)||(11430-11481)
scaffold0236 (579-623)||(11330-11374)
[»] scaffold0188 (1 HSPs)
scaffold0188 (581-636)||(13660-13715)
[»] scaffold0168 (1 HSPs)
scaffold0168 (579-636)||(11699-11756)
[»] scaffold0022 (1 HSPs)
scaffold0022 (579-636)||(93307-93364)
[»] scaffold1436 (2 HSPs)
scaffold1436 (579-623)||(1592-1636)
scaffold1436 (580-636)||(1687-1743)
[»] scaffold0809 (2 HSPs)
scaffold0809 (579-619)||(4455-4495)
scaffold0809 (579-623)||(4543-4587)
[»] scaffold0444 (1 HSPs)
scaffold0444 (579-623)||(11785-11829)


Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 6 - 376
Target Start/End: Complemental strand, 49018859 - 49018472
Alignment:
Q  6 catgcataactcttgaaggttgaatttgattaaatctcaataatggtgag------------gttcagtcaggaacaagaaaggggaagattnnnnnnnn 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||| || ||||||||||||||||||            
T  49018859 catgcataactcttgaaggttgaatttgattaaatctcaataatggtgagaatggtggtgaggttcagtctgggacaagaaaggggaagattaaaaaaaa 49018760  T
Q  94 -taaaacttgcataagataattgaggctacatgggtcatgatttttgaattgcatgctgctttgtgaatcaaatttgagtgaaaagggagaaagatttgg 192  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49018759 ataaaacttgcataagataattgaggctacatgggtcatgatctttgaattgcatgctgctttgtgaatcaaatttgagtgaaaagggagaaagatttgg 49018660  T
Q  193 agaagatggtgaatggtggtg-ggggacgatgcatttttagaaagagcaggg--nnnnnnnttctgaaattgtaactacac--atatatataggtgaaaa 287  Q
    |||||||||||||| |||| | |||||||||||||||||||||| |||||||         ||||||||||||||||||||  |||||||||||||||||    
T  49018659 agaagatggtgaatagtggggaggggacgatgcatttttagaaaaagcaggggaaaaaaaattctgaaattgtaactacacatatatatataggtgaaaa 49018560  T
Q  288 ggagaaattactaatttacgaaaatgccctcctataagggcaaaatggtnnnnnnnnngggacaaagattgtcctatatagttagtaga 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||| ||||||    
T  49018559 ggagaaattactaatttacgaaaatgccctcctataagggcaaaatggt-caaaaaaagggacaaagattgtcctatatagtaagtaga 49018472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 264 - 371
Target Start/End: Complemental strand, 12936123 - 12936017
Alignment:
Q  264 actacacatatatataggtgaaaaggagaaattactaatttacgaaaatgccctcctataagggcaaaatggtnnnnnnnnngggacaaagattgtccta 363  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||||         ||||||||||||||||||    
T  12936123 actaaacatatatataggtgaaaaggaggaatttctaatttacgaaaatgcccttccataagggcaaaatggt-caaaaaaagggacaaagattgtccta 12936025  T
Q  364 tatagtta 371  Q
    ||||||||    
T  12936024 tatagtta 12936017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 47250674 - 47250731
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  47250674 cgttagttttaattcaaaaacgttagattttcttcatcttcttctcctctttttcatc 47250731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 38842290 - 38842234
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  38842290 gttagttttaattcaaaaacgttagattttcttcatcttcttctcctctttttcatc 38842234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 632
Target Start/End: Original strand, 18731136 - 18731189
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  18731136 cgttagttttaattcaaaaacgttagattttcttcatcttcttctcctcttttt 18731189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 43726511 - 43726454
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||||| |||||| |||||||||| ||||||||||||    
T  43726511 cgttagttttaattcaaaaacgttagagtttcttcatcttcttctcctctttttcatc 43726454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 2357185 - 2357241
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  2357185 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 2357241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 8769399 - 8769456
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||| ||||||| ||||||||||| |||||||||| ||||||| ||||||||||||    
T  8769399 cgttagatttaattcaaaaacgttaggttttctttattttcttctcctctttttcatc 8769456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 21522487 - 21522430
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||    
T  21522487 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctttttttcatc 21522430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 281 - 371
Target Start/End: Original strand, 33105918 - 33106009
Alignment:
Q  281 gtgaaaaggagaaattactaatttacgaaaatg--ccctcctataagggcaaaatggtnnnnnnnnngggacaaagattgtcctatatagtta 371  Q
    |||||||| ||||||||||||||||||||||||  |||| | ||||||||||||||||         ||||||||||||||||||||||||||    
T  33105918 gtgaaaagcagaaattactaatttacgaaaatgcccccttccataagggcaaaatggt-caacaaaagggacaaagattgtcctatatagtta 33106009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 579 - 635
Target Start/End: Original strand, 10625200 - 10625256
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| | |||||||||    
T  10625200 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctccactttttcat 10625256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 636
Target Start/End: Complemental strand, 32706996 - 32706944
Alignment:
Q  584 gttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  32706996 gttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 32706944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 35085857 - 35085913
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  35085857 gttagttttaattcaaaaatgttaggttttcttcatcttcttctcctctttttcatc 35085913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 497 - 560
Target Start/End: Original strand, 38281150 - 38281213
Alignment:
Q  497 gaagaaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtagaaga 560  Q
    ||||||||||||||||||||||||| |||| | |||||||| || |||||||| | ||||||||    
T  38281150 gaagaaggtggagtatctcaccttggaaacgatgacacttgcaatttgacctttacgtagaaga 38281213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 5238568 - 5238625
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||| || ||||||||||  ||||||| |||||||||| ||||||||||||    
T  5238568 cgttagttttacttcaaaaacgttaagttttcttcatcttcttctcctctttttcatc 5238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 9230946 - 9230889
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||  ||||||| |||||||||| ||||| ||||||    
T  9230946 cgttagttttaattcaaaaacgttatgttttcttcatcttcttctcctcttattcatc 9230889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 635
Target Start/End: Complemental strand, 34568853 - 34568796
Alignment:
Q  579 cgttagttttaattgaaaaacgtta-gattttctttatcttcttcttctctttttcat 635  Q
    |||||||||||||| |||||||||| | ||||||| |||||||||| |||||||||||    
T  34568853 cgttagttttaattcaaaaacgttaggtttttcttcatcttcttctcctctttttcat 34568796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 47251015 - 47251071
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||  |||||||||| |||||||| |||||||||| ||||||||||||    
T  47251015 cgttagttttaatc-aaaaacgttaaattttcttcatcttcttctcctctttttcatc 47251071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 47305244 - 47305301
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||| ||||||| ||||||| |||||||||| ||||| ||||||    
T  47305244 cgttagttttaattcaaagacgttaggttttcttcatcttcttctactcttcttcatc 47305301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 581 - 632
Target Start/End: Complemental strand, 26920184 - 26920133
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    |||||||||||| ||||||||||  ||||||| |||||||||| ||||||||    
T  26920184 ttagttttaattcaaaaacgttaagttttcttcatcttcttctcctcttttt 26920133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 623
Target Start/End: Original strand, 473308 - 473350
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||| | ||||||||||||||||||| ||||||||||    
T  473308 ttagttttaagtcaaaaacgttagattttcttcatcttcttct 473350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 623
Target Start/End: Original strand, 23472712 - 23472754
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||| ||||||||||||||||||| || |||||||    
T  23472712 ttagttttaattcaaaaacgttagattttcttcattttcttct 23472754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 621
Target Start/End: Complemental strand, 28349650 - 28349608
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    |||||||||||||| ||||||||||||||||||| || |||||    
T  28349650 cgttagttttaattcaaaaacgttagattttcttcattttctt 28349608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 23437421 - 23437364
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| ||| | |||| ||||||||||||    
T  23437421 cgttagttttaattcaaaaatgttaggttttcttcatcattttctcctctttttcatc 23437364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 612
Target Start/End: Complemental strand, 31715891 - 31715858
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctt 612  Q
    |||||||||||||| |||||||||||||||||||    
T  31715891 cgttagttttaattcaaaaacgttagattttctt 31715858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 31715750 - 31715794
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  31715750 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 31715794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 44448180 - 44448125
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||| ||||||| |||||| ||| ||||||||||||    
T  44448180 gttagttttaattcaaaaatgttaggttttcttcatcttc-tctcctctttttcatc 44448125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 380 - 636
Target Start/End: Complemental strand, 14877949 - 14877689
Alignment:
Q  380 acttacttgtgaggtaagacacatcactc----ttacaatgtttgtatgttcagagtgtgtgggatatgacaagccttggcgagcaatatgggtgcactg 475  Q
    |||||||||||||||||||||||||||||    ||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||    
T  14877949 acttacttgtgaggtaagacacatcactcactcttacaatgtttgtatgttcagtgtgtgttggatatgacaagtcttggcgagcaatatgggtgcactg 14877850  T
Q  476 gtggtgtcttgtcgggagcatgaagaaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtagaagaaatgttcatttagaa 575  Q
    || |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  14877849 gttgtgtcttgtcgggagcatgaagaaggtggagtatttcaccttggaaacaacgacacttgtaagttgaccttcatgtagaagaaatgttcgtctagaa 14877750  T
Q  576 aggcgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  14877749 aggcgttagttttaattgaaaaacgttagatttttttcatcttcttctcctctttttcatc 14877689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 468 - 559
Target Start/End: Original strand, 16604341 - 16604432
Alignment:
Q  468 gtgcactggtggtgtcttgtcgggagcatgaagaaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtagaag 559  Q
    |||| ||| |||||||  || ||||||| ||||||||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  16604341 gtgctctgatggtgtcaagttgggagcaagaagaaggttgagtatctgaccttgaaaacaatgacacttgcaagttgaccttcatgtagaag 16604432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 34820548 - 34820491
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||||    
T  34820548 cgttagttttaatttaaaaacgttagattttcttcatcttcctctcctctttttcatc 34820491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 39149961 - 39150018
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  39149961 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 39150018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 582 - 636
Target Start/End: Complemental strand, 16655872 - 16655818
Alignment:
Q  582 tagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  16655872 tagttttaattaaaaaacgttaggttttcttcatcttcttctcctctttttcatc 16655818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 13354294 - 13354351
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||| ||| |||||||||| ||||||||||||    
T  13354294 cgttagttttaattcaaaaacgttaggtttacttcatcttcttctcctctttttcatc 13354351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 28203129 - 28203072
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  28203129 cgttaattttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 28203072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 32933708 - 32933765
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||| || ||||||| |||||||||| ||||||||||||    
T  32933708 cgttagttttaattcaaaaacgtcaggttttcttcatcttcttctcctctttttcatc 32933765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 38275724 - 38275667
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| || ||||||| ||||||||||||    
T  38275724 cgttagttttaattcaaaaacgttaggttttcttcattttcttctcctctttttcatc 38275667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 39454711 - 39454654
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||||  |||||| |||||||||| ||||||||||||    
T  39454711 cgttagttttaattcaaaaacgttagggtttcttcatcttcttctcctctttttcatc 39454654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 43183852 - 43183795
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||| ||||||| ||||||||||| |||||||||| ||||||| ||||||||||||    
T  43183852 cgttagatttaattcaaaaacgttaggttttctttattttcttctcctctttttcatc 43183795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 44915856 - 44915913
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||| |||||||| |||||||||| ||||| ||||||    
T  44915856 cgttagttttaattcaaaaacgttaaattttcttcatcttcttctcctcttcttcatc 44915913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 16260988 - 16261044
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||| ||||||||    
T  16260988 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctccttttcatc 16261044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 25642386 - 25642442
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  25642386 gttagttttaattcaaaaatgttaggttttcttcatcttcttctcctctttttcatc 25642442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 5921655 - 5921598
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||| ||||||||| ||| || ||| ||||||||||||    
T  5921655 cgttagttttaattcaaaaacgttggattttcttcatcgtcctctcctctttttcatc 5921598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 583 - 636
Target Start/End: Complemental strand, 11943757 - 11943704
Alignment:
Q  583 agttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||| | ||| ||||||||||||| |||||||||| ||||||||||||    
T  11943757 agttttaattcataaaagttagattttcttcatcttcttctcctctttttcatc 11943704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 12304054 - 12303997
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| ||||| |||| ||||||||||||    
T  12304054 cgttagttttaattcaaaaatgttaggttttcttcatcttattctcctctttttcatc 12303997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 12304423 - 12304366
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| ||||| |||| ||||||||||||    
T  12304423 cgttagttttaattcaaaaatgttaggttttcttcatcttattctcctctttttcatc 12304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 21470564 - 21470507
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||  |||||||||| ||| ||||||||    
T  21470564 cgttagttttaattaaaaaacgttaggttttctccatcttcttctcctcattttcatc 21470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 27132779 - 27132722
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||||| |||| |||||||    
T  27132779 cgttagttttaattcaaaaatgttaggttttcttcatcttcttctcctctatttcatc 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 27883585 - 27883642
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| || ||||||| || |||||||||    
T  27883585 cgttagttttaattcaaaaacgttaggttttcttcattttcttctcctttttttcatc 27883642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 28631543 - 28631486
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| |||||   |||||||||| ||||||||||||    
T  28631543 cgttagttttaattcaaaaacgttaggttttcgccatcttcttctcctctttttcatc 28631486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 33819513 - 33819570
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||||| ||||| ||||||    
T  33819513 cgttagttttaattcaaaaatgttaggttttcttcatcttcttctcctcttattcatc 33819570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 34127834 - 34127777
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||  ||||||| ||||| |||| ||||||||||||    
T  34127834 cgttagttttaattcaaaaacgttatgttttcttcatctttttctcctctttttcatc 34127777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 5961787 - 5961843
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||| ||||||| ||||| |||| ||||||||||||    
T  5961787 gttagttttaattcaaaaatgttaggttttcttcatctttttctcctctttttcatc 5961843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 10833302 - 10833246
Alignment:
Q  581 ttagttttaattgaaaaa-cgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||| |||||| ||||||| |||||||||| ||||||||||||    
T  10833302 ttagttttaattaaaaaaacgttaggttttcttcatcttcttctcctctttttcatc 10833246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 27883726 - 27883682
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||||||||||| || |||||||    
T  27883726 cgttagttttaattcaaaaacgttagattttcttcattttcttct 27883682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 36211468 - 36211524
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| ||| |||||| || |||||||||    
T  36211468 gttagttttaattcaaaaacgttaggttttcttcatcatcttctcctttttttcatc 36211524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 38275594 - 38275638
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||| |||||||||||||||||| |||||||    
T  38275594 cgttagttttaattcaaagacgttagattttctttattttcttct 38275638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 635
Target Start/End: Complemental strand, 20908779 - 20908724
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||||| |||||| |||| ||||||| |||||||| | |||||||||||    
T  20908779 gttagttttaattcaaaaactttaggttttcttcatcttcttttcctctttttcat 20908724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 635
Target Start/End: Complemental strand, 27246251 - 27246196
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    |||| |||||||| ||||||||||| ||||||| |||||||||| ||||| |||||    
T  27246251 gttatttttaattcaaaaacgttaggttttcttcatcttcttctcctcttcttcat 27246196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 623
Target Start/End: Complemental strand, 31450934 - 31450891
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||    
T  31450934 gttagttttaattcaaaaacgttaggttttcttcatcttcttct 31450891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 585 - 636
Target Start/End: Original strand, 32503669 - 32503720
Alignment:
Q  585 ttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||| | ||||||||||||||||||| ||||| |||| ||||||||||||    
T  32503669 ttttaagtcaaaaacgttagattttcttcatctttttctcctctttttcatc 32503720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 635
Target Start/End: Complemental strand, 36442402 - 36442347
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||||| |||||| |||| ||||||| |||||||| | |||||||||||    
T  36442402 gttagttttaattcaaaaacattaggttttcttcatcttcttttcctctttttcat 36442347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 585 - 636
Target Start/End: Original strand, 44612606 - 44612657
Alignment:
Q  585 ttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||| ||||| ||||||||||||| || ||||||| ||||||||||||    
T  44612606 ttttaattcaaaaatgttagattttcttcattttcttctcctctttttcatc 44612657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 621
Target Start/End: Complemental strand, 4104428 - 4104386
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    |||||||||||||| ||||||||||||||||||| || |||||    
T  4104428 cgttagttttaattcaaaaacgttagattttcttcattttctt 4104386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 582 - 632
Target Start/End: Original strand, 15136934 - 15136984
Alignment:
Q  582 tagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    ||||||||||| ||||| ||||||||||||| ||| |||||| ||||||||    
T  15136934 tagttttaattaaaaaatgttagattttcttcatcatcttctcctcttttt 15136984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 582 - 636
Target Start/End: Original strand, 16736221 - 16736275
Alignment:
Q  582 tagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||  |||||||||| ||||||| ||||| |||| ||||||||||||    
T  16736221 tagttttaatttgaaaacgttaggttttcttcatcttattctcctctttttcatc 16736275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 564
Target Start/End: Complemental strand, 37048741 - 37048655
Alignment:
Q  478 ggtgtcttgtcgggagcatgaagaaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtagaagaaatg 564  Q
    |||||||| | ||||| | |||||| | || ||||||||| | |||||  | |||||||  ||||||||||||||||||||||||||    
T  37048741 ggtgtcttattgggagaaggaagaaaggggggtatctcacatcgaaaatgatgacactttcaagttgaccttcatgtagaagaaatg 37048655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 621
Target Start/End: Complemental strand, 41377623 - 41377581
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||    
T  41377623 cgttagttttaattcaaaaacgttaggttttcttcatcttctt 41377581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 624
Target Start/End: Complemental strand, 15137073 - 15137028
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttctt 624  Q
    |||||||||||||| ||||||||||| ||||||| || ||||||||    
T  15137073 cgttagttttaattcaaaaacgttaggttttcttcattttcttctt 15137028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 624
Target Start/End: Original strand, 16655723 - 16655768
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttctt 624  Q
    |||||||||||||| ||||||||||| ||||||| || ||||||||    
T  16655723 cgttagttttaattcaaaaacgttaggttttcttcattttcttctt 16655768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 612
Target Start/End: Original strand, 18565183 - 18565216
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctt 612  Q
    |||||||||||||| |||||||||||||||||||    
T  18565183 cgttagttttaattcaaaaacgttagattttctt 18565216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 27476484 - 27476541
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||| ||| || || |||| ||||||||||||    
T  27476484 cgttagttttaattcaaaaacgttaggtttacttcatatttttctcctctttttcatc 27476541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 612
Target Start/End: Complemental strand, 35408790 - 35408757
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctt 612  Q
    |||||||||||||| |||||||||||||||||||    
T  35408790 cgttagttttaattcaaaaacgttagattttctt 35408757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 17856316 - 17856360
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  17856316 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 17856360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 28202977 - 28203021
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| || |||||||| ||||||| ||||||||||    
T  28202977 cgttagttttaattcaataacgttaggttttcttcatcttcttct 28203021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 37744657 - 37744613
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  37744657 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 37744613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 40694444 - 40694400
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  40694444 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 40694400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 41377471 - 41377515
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  41377471 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 41377515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 41659862 - 41659906
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  41659862 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 41659906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 612
Target Start/End: Complemental strand, 41660004 - 41659972
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctt 612  Q
    ||||||||||||| |||||||||||||||||||    
T  41660004 gttagttttaattcaaaaacgttagattttctt 41659972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 44612752 - 44612708
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  44612752 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 44612708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 12084441 - 12084557
Alignment:
Q  263 aactacacatatatataggtgaaaaggagaaattactaatttacgaaaatgccctcctataagggcaaaatggtnnnnnnnnngggacaaagattgtcct 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||           ||||||||||||||||    
T  12084441 aactacacatatatataggtgaaaaggagaaattactaatttacgaaaatgcctttccataagggcaaaatgggaaaaaaaaaaggacaaagattgtcct 12084540  T
Q  363 atatag-ttagtagatt 378  Q
    |||||| ||||||||||    
T  12084541 atatagtttagtagatt 12084557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 31029792 - 31029736
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  31029792 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 31029736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 557
Target Start/End: Complemental strand, 10456651 - 10456562
Alignment:
Q  468 gtgcactggtggtgtcttgtcgggagcatgaagaaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtaga 557  Q
    |||| ||||||||||| ||| |||   |||||||||||| ||| |||||||||| |||| | |||||||| ||||||||| |||||||||    
T  10456651 gtgctctggtggtgtcatgttggggtgatgaagaaggtgaagtttctcaccttggaaacgatgacacttgcaagttgaccctcatgtaga 10456562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 13156108 - 13156051
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| ||||| |||| ||||||||||||    
T  13156108 cgttagttttaattcaaaaacgttaggttttcttcatctttttctcctctttttcatc 13156051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 13160964 - 13160907
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| ||||| |||| ||||||||||||    
T  13160964 cgttagttttaattcaaaaacgttaggttttcttcatctttttctcctctttttcatc 13160907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 14337019 - 14337076
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| | ||||||||||||    
T  14337019 cgttagttttaattcaaaaacgttaggttttcttcatcttcttatcctctttttcatc 14337076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 29999530 - 29999587
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||| ||||||    
T  29999530 cgttagttttaattaaaaaacgttaggttttcttcatcttcttctcctcttcttcatc 29999587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 33544939 - 33544996
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  33544939 cgttagttttaattcaaaaaggttaggttttcttcatcttcttctcctctttttcatc 33544996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 33329474 - 33329418
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||| ||| ||||||||||||    
T  33329474 gttagttttaattcaaaaacgttaggttttcttaatcttcgtctcctctttttcatc 33329418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 35132719 - 35132775
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||| ||| ||||||||||||    
T  35132719 gttagttttaattcaaaaacgttaggttttcttcatcttcgtctcctctttttcatc 35132775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 579 - 634
Target Start/End: Complemental strand, 24605143 - 24605088
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttca 634  Q
    |||||||||||||| |||||| |||| ||||||| |||||||||| ||||||||||    
T  24605143 cgttagttttaattcaaaaacattaggttttcttcatcttcttctcctctttttca 24605088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 580 - 634
Target Start/End: Complemental strand, 7537873 - 7537819
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttca 634  Q
    ||||||||||||| |||||| |||| ||||||| |||||||||| ||||||||||    
T  7537873 gttagttttaattcaaaaacattaggttttcttcatcttcttctcctctttttca 7537819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 1158860 - 1158803
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||   ||||||| |||||||||| ||||||||||||    
T  1158860 cgttagttttaattcaaaaacgtttcgttttcttcatcttcttctcctctttttcatc 1158803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 6220173 - 6220230
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||| ||| |||||||||| |||||| | |||||||||| ||||||||||||    
T  6220173 cgttagttttcattcaaaaacgttaaattttcctcatcttcttctcctctttttcatc 6220230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 12903480 - 12903423
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||||||||||| || ||||||| || |||||||||    
T  12903480 cgttagttttaattcaaaaatgttagattttcttcattttcttctcctttttttcatc 12903423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 24548358 - 24548415
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||| ||| | ||||||    
T  24548358 cgttagttttaattcaaaaacgttagattttcttcatcctcttctcctcctcttcatc 24548415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 24548510 - 24548466
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| |||||||||||||||||||| | |||||||    
T  24548510 cgttagttttaattcaaaaacgttagattttctttcttttcttct 24548466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 635
Target Start/End: Original strand, 9174019 - 9174074
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||||| ||||||||||| ||||| | |||||||| | |||||||||||    
T  9174019 gttagttttaattcaaaaacgttaggttttcatcatcttcttttcctctttttcat 9174074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 582 - 636
Target Start/End: Original strand, 2949411 - 2949465
Alignment:
Q  582 tagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||| ||||||||||| ||||||| ||||| || | ||||||||||||    
T  2949411 tagttttaattcaaaaacgttaggttttcttcatctttttttcctctttttcatc 2949465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 636
Target Start/End: Original strand, 11524898 - 11524940
Alignment:
Q  594 aaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||    
T  11524898 aaaaatgttagattttcttcatcttcttctcctctttttcatc 11524940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 621
Target Start/End: Original strand, 1158708 - 1158749
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    ||||||||||||| ||||||||||||||||||| || |||||    
T  1158708 gttagttttaattcaaaaacgttagattttcttcattttctt 1158749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 621
Target Start/End: Complemental strand, 25551604 - 25551563
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||    
T  25551604 gttagttttaattcaaaaacgttaggttttcttgatcttctt 25551563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 11525035 - 11524991
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  11525035 cgttagttttaattaaaaaacgttaggttttcttcattttcttct 11524991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 12903338 - 12903382
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| ||| ||||||    
T  12903338 cgttagttttaattcaaaaacgttaggttttcttcatcatcttct 12903382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 14337171 - 14337127
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    ||||| |||||||| ||||||||||||||||||| || |||||||    
T  14337171 cgttaattttaattcaaaaacgttagattttcttcattttcttct 14337127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 24604991 - 24605035
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  24604991 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 24605035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 29010071 - 29010115
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  29010071 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 29010115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 33972321 - 33972380
Alignment:
Q  579 cgttagttttaattgaaaaacgtt--agattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||  || | ||||| |||||||||| ||||||||||||    
T  33972321 cgttagttttaattcaaaaacgttttaggtcttcttcatcttcttctcctctttttcatc 33972380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 266 - 370
Target Start/End: Original strand, 27897448 - 27897551
Alignment:
Q  266 tacacatatatataggtgaaaaggagaaattactaatttacgaaaatgccctcctataagggcaaaatggtnnnnnnnnngggacaaagattgtcctata 365  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||    
T  27897448 tacacatatatataggtcaaagtgagaaattactaatttacgaaaatgcccttctataagggcaaaatggt-ccaaaaaagggacaaagattgtcctata 27897546  T
Q  366 tagtt 370  Q
    |||||    
T  27897547 tagtt 27897551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 579 - 634
Target Start/End: Original strand, 53645568 - 53645623
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttca 634  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  53645568 cgttagttttaattcaaaaacgttagattttctttatcttcttctcctctttttca 53645623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 632
Target Start/End: Complemental strand, 4966137 - 4966084
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  4966137 cgttagttttaattcaaaaacgttaggttttcttcatcttcttcttctcttttt 4966084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 12381323 - 12381266
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||||||||| || |||||||||| ||||||||||||    
T  12381323 cgttagttttaattcaaaaacgttagatttttttcatcttcttctcctctttttcatc 12381266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 24504057 - 24504114
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| || |||||||||    
T  24504057 cgttagttttaattcaaaaacgttagattttctttatcctcttctcctttttttcatc 24504114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 33626133 - 33626076
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  33626133 cgttagttttaattaaaaaacgttaggttttcttcatcttcttctcctctttttcatc 33626076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 43316996 - 43317053
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  43316996 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 43317053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 43969796 - 43969739
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||||    
T  43969796 cgttagttttaattcaaaaatgttaggttttctttatcttcttctcctctttttcatc 43969739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 45911696 - 45911753
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  45911696 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 45911753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 25218202 - 25218258
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  25218202 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 25218258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 1205644 - 1205589
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  1205644 ttagttttaattcaaaaacgttatgttttctttatcttcttctcctctttttcatc 1205589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 27347864 - 27347809
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||    
T  27347864 ttagttttaattcaaaaacgttagattttcttcatcttcttcacctctttttcatc 27347809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 29711981 - 29712048
Alignment:
Q  270 catatatataggtgaaaagg-agaaattactaatttacgaaaatgccctcctataagggcaaaatggt 336  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||||||   ||||||||||||||||    
T  29711981 catatatatagggggaaaggcagaaattactaatttacgaaaatgccctttcataagggcaaaatggt 29712048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 44432893 - 44432836
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| |||||||| |||||||||| |||||||||| ||||||||||||    
T  44432893 cgttaattttaattcaaaaacgtcagattttcttcatcttcttctcctctttttcatc 44432836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 46621196 - 46621139
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| || ||||||| ||||||||||||    
T  46621196 cgttagttttaattaaaaaacgttaggttttcttcattttcttctcctctttttcatc 46621139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 21218115 - 21218059
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||||| || || |||||||||| ||||||||||||    
T  21218115 gttagttttaattcaaaaacgttagatatttttcatcttcttctcctctttttcatc 21218059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 29864294 - 29864350
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  29864294 gttagttttaattcaaaaaggttaggttttcttcatcttcttctcctctttttcatc 29864350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 44710521 - 44710577
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||| |||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  44710521 gttaattttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 44710577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 45683235 - 45683291
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| |||||| |||| ||||||| |||||||||| ||||||||||||    
T  45683235 gttagttttaattcaaaaacattaggttttcttcatcttcttctcctctttttcatc 45683291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 623
Target Start/End: Original strand, 8751405 - 8751448
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||    
T  8751405 gttagttttaattaaaaaacgttagattttcttcatcttcttct 8751448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 501 - 560
Target Start/End: Complemental strand, 28534755 - 28534696
Alignment:
Q  501 aaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtagaaga 560  Q
    |||||| | ||| ||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  28534755 aaggtgaactatatcaccttaaaaataacgacacttgcaagttgaccttcatgtagaaga 28534696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 632
Target Start/End: Original strand, 8246884 - 8246937
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    |||||||||||||| ||||||||||| |||| || |||||||||| ||||||||    
T  8246884 cgttagttttaattcaaaaacgttaggtttttttcatcttcttctcctcttttt 8246937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 54136208 - 54136265
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| | |||||||| ||||||||||||    
T  54136208 cgttagttttaattcaaaaatgttaggttttcttcaccttcttctcctctttttcatc 54136265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 1157324 - 1157380
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||| |||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  1157324 gttaattttaattcaaaaatgttaggttttcttcatcttcttctcctctttttcatc 1157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 25218353 - 25218309
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||||||||||| || |||||||    
T  25218353 cgttagttttaattcaaaaacgttagattttcttcattttcttct 25218309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 45911843 - 45911799
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||||||||||| || |||||||    
T  45911843 cgttagttttaatttaaaaacgttagattttcttcattttcttct 45911799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 552
Target Start/End: Original strand, 46608127 - 46608167
Alignment:
Q  512 tctcaccttgaaaacaacgacacttgtaagttgaccttcat 552  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  46608127 tctcaccttggaaacaacgacacttgcaagttgaccttcat 46608167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 624
Target Start/End: Original strand, 54191706 - 54191750
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttctt 624  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||    
T  54191706 gttagttttaattcaaaaacgttaggttttcttcatcttcttctt 54191750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 635
Target Start/End: Original strand, 40067466 - 40067521
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||||| ||||||||||  ||||||| |||||||| | |||||||||||    
T  40067466 gttagttttaattcaaaaacgttatgttttcttcatcttcttttcctctttttcat 40067521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 579 - 618
Target Start/End: Original strand, 42779637 - 42779676
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatctt 618  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  42779637 cgttagttttaattcaaaaacgttagattttcttcatctt 42779676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 635
Target Start/End: Complemental strand, 46535790 - 46535735
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||||| |||||| |||| ||||||| ||||| || |||||||||||||    
T  46535790 gttagttttaattaaaaaacattaggttttcttcatcttttttttctctttttcat 46535735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 586 - 636
Target Start/End: Original strand, 4793723 - 4793773
Alignment:
Q  586 tttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||| ||||||||||| ||||||| ||||| |||| ||||||||||||    
T  4793723 tttaattcaaaaacgttaggttttcttcatctttttctcctctttttcatc 4793773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 9010622 - 9010679
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||| |||| ||| ||| |||||||||| || |||||||||    
T  9010622 cgttagttttaattcaaaaacattaggtttgcttcatcttcttctcctatttttcatc 9010679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 29970461 - 29970404
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||| |||||  ||||||| ||||| |||| ||||||||||||    
T  29970461 cgttagttttaattcaaaatcgttaagttttcttcatcttgttctcctctttttcatc 29970404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 621
Target Start/End: Original strand, 32384771 - 32384812
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||    
T  32384771 gttagttttaattcaaaaacgttaggttttcttcatcttctt 32384812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 34958948 - 34959005
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| |||| || || ||||||| ||||||||||||    
T  34958948 cgttagttttaattcaaaaatgttaggtttttttcattttcttctcctctttttcatc 34959005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 10014733 - 10014689
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||| ||||||| |||||||||| |||||||    
T  10014733 cgttagttttaattcaaacacgttagcttttctttattttcttct 10014689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 10021874 - 10021830
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||| ||||||| |||||||||| |||||||    
T  10021874 cgttagttttaattcaaacacgttagcttttctttattttcttct 10021830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 25058950 - 25058994
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  25058950 cgttagttttaattcaaaaacgttagcttttcttcattttcttct 25058994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 25593360 - 25593316
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  25593360 cgttagttttaatttaaaaacgttaggttttcttcattttcttct 25593316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 40067617 - 40067573
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  40067617 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 40067573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 44428688 - 44428732
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  44428688 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 44428732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 32448395 - 32448467
Alignment:
Q  264 actacacatatatataggtgaaaaggagaaattactaatttacgaaaatgccctcctataagggcaaaatggt 336  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||||    
T  32448395 actaaacatatatataggtgaaaaggaggaatttctaatttacgaaaatgcccttccataagggcaaaatggt 32448467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 3869218 - 3869161
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  3869218 cgttagttttaattcaaaaacgttagattttcttcatcttcttctcctctttttcatc 3869161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 14920528 - 14920585
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  14920528 cgttagttttaattcaaaaacgttagattttcttcatcctcttcttctctttttcatc 14920585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 36344078 - 36344135
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  36344078 cgttagttttaattcaaaaacgttagattttcttcatcttcttcttctttttttcatc 36344135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 39912034 - 39912091
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  39912034 cgttagttttaattcaaaaacgttagattttcttcatcttcttctcctctttttcatc 39912091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 27267158 - 27267092
Alignment:
Q  270 catatatataggtgaaaaggagaaattactaatttacgaaaatgccctcctataagggcaaaatggt 336  Q
    |||||||||| | |||| | |||||||||||||||||||||||||||| | ||||||||||||||||    
T  27267158 catatatatatgggaaaggcagaaattactaatttacgaaaatgcccttccataagggcaaaatggt 27267092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 119233 - 119290
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  119233 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 119290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 23244784 - 23244727
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  23244784 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 23244727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 29027241 - 29027184
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||    
T  29027241 cgttagttttaattcaaaaacgttagattttcgtcatcttcttctcctctttttcatc 29027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 31230730 - 31230787
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||    
T  31230730 cgttagttttaattcaaaaacgttatattttcttcatcttcttctcctctttttcatc 31230787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 35224036 - 35223979
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  35224036 cgttagttttaattcaaaaacgttagtttttcttcatcttcttctcctctttttcatc 35223979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 580 - 635
Target Start/End: Original strand, 5416930 - 5416985
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||||| ||||||||||||||||||| |||||||| | |||||||||||    
T  5416930 gttagttttaattcaaaaacgttagattttcttcatcttcttttcctctttttcat 5416985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 495 - 557
Target Start/End: Complemental strand, 7445958 - 7445896
Alignment:
Q  495 atgaagaaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtaga 557  Q
    |||||||||||||||| |||||||||||||| ||||||||||| | ||||||  |||||||||    
T  7445958 atgaagaaggtggagtttctcaccttgaaaaaaacgacacttggatgttgactctcatgtaga 7445896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 40094744 - 40094687
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||| |||||| | |||||||||| ||||||||||||    
T  40094744 cgttagttttaattcaaaaacgttaaattttcctcatcttcttctcctctttttcatc 40094687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 270 - 369
Target Start/End: Original strand, 6580333 - 6580431
Alignment:
Q  270 catatatataggtgaaaagg-agaaattactaatttacgaaaatgccctcctataagggcaaaatggtnnnnnnnnngggacaaagattgtcctatatag 368  Q
    |||||||||||| | ||||  ||||||||||||||||||||||||||||   ||||||||||||||||         |||||||||||||||||||||||    
T  6580333 catatatatagggggaaagacagaaattactaatttacgaaaatgccctttcataagggcaaaatggt--aaaaaaagggacaaagattgtcctatatag 6580430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 559
Target Start/End: Original strand, 24570392 - 24570452
Alignment:
Q  499 agaaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtagaag 559  Q
    |||||||||| |||||||||||  ||||||| ||||||| || ||||||||||||||||||    
T  24570392 agaaggtggaatatctcacctttgaaacaacaacacttgcaaattgaccttcatgtagaag 24570452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 33542502 - 33542558
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||||||||||| || ||||||| ||||| ||||||    
T  33542502 gttagttttaattcaaaaacgttagattttcttcattttcttctcctcttcttcatc 33542558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 12873315 - 12873260
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| ||||| ||||||    
T  12873315 ttagttttaattcaaaaacgttaggttttcttcatcttcttctcctcttcttcatc 12873260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 7041898 - 7041841
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| ||||||||||| ||||||| |||||||||| | ||||||||||    
T  7041898 cgttaattttaattcaaaaacgttaggttttcttcatcttcttctccactttttcatc 7041841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 8654205 - 8654148
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||  ||||||| ||||| |||| ||||||||||||    
T  8654205 cgttagttttaattcaaaaacgttatgttttcttcatctttttctcctctttttcatc 8654148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 9495292 - 9495235
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||  || ||||||||    
T  9495292 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcgtccttttcatc 9495235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 11639319 - 11639263
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||  |||||||||||||    
T  11639319 cgttaattttaattcaaaaacgttagattttcttcatcttctt-atctctttttcatc 11639263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 18622016 - 18621959
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||||||  |||||||||||    
T  18622016 cgttagttttaattcaaaaatgttaggttttcttcatcttcttctcatctttttcatc 18621959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 26736394 - 26736337
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||| || |||||| ||||| |||| ||||||||||||    
T  26736394 cgttagttttaattcaaaaacgtttgagtttcttcatctttttctcctctttttcatc 26736337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 39240147 - 39240204
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| ||||| |||| ||||||||||||    
T  39240147 cgttagttttaattcaaaaatgttaggttttcttcatcttattctcctctttttcatc 39240204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 18017907 - 18017951
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||    
T  18017907 cgttagttttaattcaaaaacgttagtttttctttattttcttct 18017951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 18018055 - 18018011
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||    
T  18018055 cgttagttttaatttaaaaacgttaggttttcttcatcttcttct 18018011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 18914378 - 18914434
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||| |||| || |||||||||| ||||||||||||    
T  18914378 gttagttttaattcaaaaatgttaggtttttttcatcttcttctcctctttttcatc 18914434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 635
Target Start/End: Original strand, 37393594 - 37393650
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    |||||||||||||| ||||||||||| ||||||| || || |||| |||||||||||    
T  37393594 cgttagttttaattcaaaaacgttagtttttcttcatatttttctcctctttttcat 37393650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 585 - 636
Target Start/End: Complemental strand, 6843749 - 6843698
Alignment:
Q  585 ttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||| |||||| |||| ||||||| |||||||||| ||||||||||||    
T  6843749 ttttaattcaaaaacattaggttttcttcatcttcttctcctctttttcatc 6843698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 1825926 - 1825983
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||  |||||||| ||| |||||||||| ||| ||||||||    
T  1825926 cgttagttttaattcaaaaatattagatttccttcatcttcttctcctccttttcatc 1825983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 1860371 - 1860428
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||  |||||||| ||| |||||||||| ||| ||||||||    
T  1860371 cgttagttttaattcaaaaatattagatttccttcatcttcttctcctccttttcatc 1860428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 612
Target Start/End: Original strand, 9495149 - 9495182
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctt 612  Q
    |||||||||||||| |||||||||||||||||||    
T  9495149 cgttagttttaattcaaaaacgttagattttctt 9495182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 612
Target Start/End: Complemental strand, 18914520 - 18914487
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctt 612  Q
    |||||||||||||| |||||||||||||||||||    
T  18914520 cgttagttttaattcaaaaacgttagattttctt 18914487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 21515469 - 21515412
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||| ||||||| ||||||||||  || |||| |||||||||| ||||||||||||    
T  21515469 cgttagctttaattcaaaaacgttacgttgtcttcatcttcttctcctctttttcatc 21515412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 624
Target Start/End: Original strand, 26217186 - 26217231
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttctt 624  Q
    |||||||||||||| ||||||||| ||||||||| || ||||||||    
T  26217186 cgttagttttaatttaaaaacgttggattttcttcattttcttctt 26217231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 30568545 - 30568488
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||| |||| ||||||| | ||||||||  |||||||||||    
T  30568545 cgttagttttaattcaaaaacattaggttttcttcaccttcttctcatctttttcatc 30568488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 8654053 - 8654097
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  8654053 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 8654097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 16645662 - 16645706
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  16645662 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 16645706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 615
Target Start/End: Original strand, 21515328 - 21515364
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttat 615  Q
    |||||||||||||| |||||| |||||||||||||||    
T  21515328 cgttagttttaattcaaaaacattagattttctttat 21515364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 24456921 - 24456877
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  24456921 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 24456877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 31230882 - 31230838
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  31230882 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 31230838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 35223891 - 35223935
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||| ||||||||| ||||||||||||||||||| || |||||||    
T  35223891 cgtttgttttaattcaaaaacgttagattttcttcattttcttct 35223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 627
Target Start/End: Complemental strand, 35486131 - 35486086
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctc 627  Q
    ||||||||||||| |||||||||||||||  ||| |||||||||||||    
T  35486131 gttagttttaattcaaaaacgttagattt--tttttcttcttcttctc 35486086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 40040279 - 40040323
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  40040279 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 40040323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 40094592 - 40094636
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| || |||||||||||||||| || |||||||    
T  40094592 cgttagttttaattcaagaacgttagattttcttcattttcttct 40094636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 44254982 - 44255026
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||| ||||| |||||||||| |||||||    
T  44254982 cgttagttttaattcaaaaatgttaggttttctttattttcttct 44255026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 7743034 - 7742977
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  7743034 cgttagttttaattcaaaaacgttagattttcttcatcttcttctcctctttttcatc 7742977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 9028460 - 9028403
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  9028460 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 9028403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 15862444 - 15862387
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  15862444 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 15862387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 28688259 - 28688202
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  28688259 cgttaattttaattcaaaaacgttagattttcttcatcttcttctcctctttttcatc 28688202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 35753699 - 35753643
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  35753699 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 35753643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 54247380 - 54247436
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  54247380 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 54247436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 559
Target Start/End: Original strand, 31116439 - 31116501
Alignment:
Q  497 gaagaaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtagaag 559  Q
    |||||| || |||||||||| ||| ||||||||||| |||| |||||||||||||||||||||    
T  31116439 gaagaaagttgagtatctcaactttaaaacaacgactcttgcaagttgaccttcatgtagaag 31116501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 7937832 - 7937775
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||  ||||||| |||||||||| ||||||||||||    
T  7937832 cgttagttttaattcaaaaacgttaagttttcttcatcttcttctcctctttttcatc 7937775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 8846193 - 8846250
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  8846193 cgttaattttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 8846250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 12123207 - 12123264
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  12123207 cgttagttttaattcaaaaatgttaggttttcttcatcttcttctcctctttttcatc 12123264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 14353317 - 14353260
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  14353317 cgttagttttaattcaaaaatgttaggttttcttcatcttcttctcctctttttcatc 14353260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 34521383 - 34521440
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| |||||||||| || |||||||||| ||||||||||||    
T  34521383 cgttagttttaattcaaaaatgttagatttttttcatcttcttctcctctttttcatc 34521440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 40639234 - 40639291
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||    
T  40639234 cgttggttttaattcaaaaacgttagattttcttcatcttcttctcctcttcttcatc 40639291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 40926128 - 40926185
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||||||||||||||| ||||||| |  ||||||| ||||||||||||    
T  40926128 cgttagttttaattgaaaaacgttaggttttcttcactttcttctcctctttttcatc 40926185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 41998088 - 41998031
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| |||||||  ||||||||| ||||||||||||    
T  41998088 cgttagttttaattcaaaaacgttaggttttcttcgtcttcttctcctctttttcatc 41998031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 45171185 - 45171242
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||  ||||||| |||||||||| ||||||||||||    
T  45171185 cgttagttttaattcaaaaacgttatgttttcttcatcttcttctcctctttttcatc 45171242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 47891782 - 47891725
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||| ||||||    
T  47891782 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctcttcttcatc 47891725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 49222294 - 49222239
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| |||||||||||||||||||  ||||||||| ||| ||||||||    
T  49222294 ttagttttaattcaaaaacgttagattttcttcgtcttcttctcctcattttcatc 49222239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 580 - 635
Target Start/End: Complemental strand, 52606386 - 52606331
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||||| ||||||||||||||||||| |||||  ||| |||||||||||    
T  52606386 gttagttttaattcaaaaacgttagattttcttcatctttatctcctctttttcat 52606331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 582 - 636
Target Start/End: Original strand, 2829528 - 2829582
Alignment:
Q  582 tagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||| |||||| |||| ||||||| |||||||||| ||||||||||||    
T  2829528 tagttttaattcaaaaacattaggttttcttcatcttcttctcctctttttcatc 2829582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 10756977 - 10756919
Alignment:
Q  579 cgttagttttaattgaaaaacgttagatttt-ctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| |||||||||||||||| ||| |||||||||| ||||||||||||    
T  10756977 cgttaattttaattcaaaaacgttagatttttcttcatcttcttctcctctttttcatc 10756919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 581 - 635
Target Start/End: Complemental strand, 44069390 - 44069336
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    |||||||||||| ||||||||||| ||||||| |||||||| | |||||||||||    
T  44069390 ttagttttaattcaaaaacgttaggttttcttcatcttcttttcctctttttcat 44069336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 583 - 636
Target Start/End: Original strand, 40969376 - 40969429
Alignment:
Q  583 agttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||| ||||||||||| ||||||| |||||||||| ||||| ||||||    
T  40969376 agttttaattcaaaaacgttaggttttcttcatcttcttctcctcttcttcatc 40969429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 41208518 - 41208575
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||| ||||||| ||||||||||| ||||||| || ||||||| ||||||||||||    
T  41208518 cgttagatttaattcaaaaacgttaggttttcttcattttcttctcctctttttcatc 41208575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 43899343 - 43899286
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| || |||||||| ||||||| |||||||||| || |||||||||    
T  43899343 cgttagttttaattaaacaacgttaggttttcttcatcttcttctcctttttttcatc 43899286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 53678702 - 53678645
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||| |||||| || ||||||||||| ||||||| |||||||||||||||| ||||||    
T  53678702 cgttggttttagttcaaaaacgttaggttttcttcatcttcttcttctcttcttcatc 53678645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 2078740 - 2078684
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||| ||||| ||||||    
T  2078740 gttagttttaattcaaacacgttaaattttcttcatcttcttctcctcttcttcatc 2078684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 636
Target Start/End: Original strand, 29248438 - 29248491
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||||||||  ||||||| |||||||||| ||||||||||||    
T  29248438 ttagttttaattcaaaaacgtta--ttttcttcatcttcttctcctctttttcatc 29248491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 31513981 - 31514037
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||| ||||||| ||||| |||| ||||||||||||    
T  31513981 gttagttttaattcaaaaatgttaggttttcttcatctttttctcctctttttcatc 31514037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 53841295 - 53841251
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||    
T  53841295 cgttagttttaattcaaaaacgttaggttttcttcatcttcttct 53841251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 579 - 622
Target Start/End: Original strand, 5348696 - 5348739
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttc 622  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||    
T  5348696 cgttaattttaattcaaaaacgttagattttcttcatcttcttc 5348739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 22444453 - 22444398
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||  ||||| |||||||||||| |||||||||| || |||||||||    
T  22444453 ttagttttaattcgaaaacattagattttcttcatcttcttctcctatttttcatc 22444398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 623
Target Start/End: Complemental strand, 50819485 - 50819442
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    ||||||||||||| ||||||||||||||||||| || |||||||    
T  50819485 gttagttttaattcaaaaacgttagattttcttcattttcttct 50819442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 623
Target Start/End: Original strand, 50856379 - 50856422
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    ||||||||||||| ||||||||||||||||||| || |||||||    
T  50856379 gttagttttaattcaaaaacgttagattttcttcattttcttct 50856422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 580 - 623
Target Start/End: Original strand, 54081401 - 54081444
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    ||||||||||||| ||||||||||||||||||| || |||||||    
T  54081401 gttagttttaatttaaaaacgttagattttcttcattttcttct 54081444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 586 - 636
Target Start/End: Original strand, 4846719 - 4846769
Alignment:
Q  586 tttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||| |||||||||  |||||||| |||||||||| ||||||||||||    
T  4846719 tttaattcaaaaacgttgaattttcttcatcttcttctcctctttttcatc 4846769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 52268220 - 52268278
Alignment:
Q  579 cgttagttttaattga-aaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| | |||||||||| ||||||| ||||| |||| ||||||||||||    
T  52268220 cgttagttttaatttataaaacgttagtttttcttcatctttttctcctctttttcatc 52268278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 17102501 - 17102558
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| ||||||||||| ||||||| || ||||||  ||||||||||||    
T  17102501 cgttaattttaattcaaaaacgttaggttttcttcatattcttcacctctttttcatc 17102558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 621
Target Start/End: Original strand, 19124307 - 19124348
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||    
T  19124307 gttagttttaattcaaaaacgttaggttttcttcatcttctt 19124348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 612
Target Start/End: Complemental strand, 19124441 - 19124408
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctt 612  Q
    |||||||||||||| |||||||||||||||||||    
T  19124441 cgttagttttaattcaaaaacgttagattttctt 19124408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 26332587 - 26332530
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||| |||| ||||| | ||||||||||  |||||||||||    
T  26332587 cgttagttttaattcaaaaacattaggttttcatcatcttcttctcatctttttcatc 26332530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 54081552 - 54081495
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| ||||| ||||| ||||||| || ||||||| ||||||||||||    
T  54081552 cgttatttttaattcaaaaatgttaggttttcttcattttcttctcctctttttcatc 54081495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 4846865 - 4846821
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  4846865 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 4846821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 7950392 - 7950436
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  7950392 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 7950436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 8846345 - 8846301
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||| ||||||||||||| || |||||||    
T  8846345 cgttagttttaattcaaaaatgttagattttcttcattttcttct 8846301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 9028308 - 9028352
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  9028308 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 9028352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 635
Target Start/End: Original strand, 21169783 - 21169839
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    |||||||||||||| ||||||||||| ||||||| | |||| ||| || ||||||||    
T  21169783 cgttagttttaattcaaaaacgttaggttttcttcaccttcgtctcctatttttcat 21169839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 40410829 - 40410873
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  40410829 cgttagttttaattaaaaaacgttaggttttcttcattttcttct 40410873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 45171336 - 45171292
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  45171336 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 45171292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 46766740 - 46766784
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  46766740 cgttagttttaattaaaaaacgttaggttttcttcattttcttct 46766784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 51311707 - 51311751
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| |||||||||||| |||||| || |||||||    
T  51311707 cgttagttttaattcaaaaacgttagagtttcttcattttcttct 51311751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 30293130 - 30293187
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  30293130 cgttagttttaattcaaaaacgttaggttttctttatcttattcttctctttttcatc 30293187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 52412865 - 52412810
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  52412865 ttagttttaattcaaaaacgttagattttcttcatcttcttcttttctttttcatc 52412810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 11787857 - 11787914
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| || ||||||| ||||||||||||    
T  11787857 cgttagttttaattcaaaaacgttagattttcttcattttcttctcctctttttcatc 11787914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 21385053 - 21385110
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||    
T  21385053 cgttagttttaattcaaaaacgatagattttcttcatcttcttctcctctttttcatc 21385110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 24590494 - 24590437
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||    
T  24590494 cgttagttttaattcaaaaacgttagattttcttcaccttcttctcctctttttcatc 24590437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 29257092 - 29257035
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  29257092 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 29257035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 37199190 - 37199133
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  37199190 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 37199133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 50921177 - 50921234
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||  |||||||||||    
T  50921177 cgttagttttaattcaaaaacgttagattttcttcatcttcttctcttctttttcatc 50921234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 10923631 - 10923575
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  10923631 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 10923575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 632
Target Start/End: Complemental strand, 11788009 - 11787957
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  11788009 gttagttttaattcaaaaacgttagattttcttcatcttcttctcctcttttt 11787957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 24655704 - 24655760
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  24655704 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 24655760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 35986350 - 35986406
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  35986350 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 35986406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 636
Target Start/End: Original strand, 30611339 - 30611394
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  30611339 ttagttttaattaaaaaacgttaggttttcttcatcttcttctcctctttttcatc 30611394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 18793808 - 18793866
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttcttt-atcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||    
T  18793808 cgttagttttaattcaaaaacgttagattttttttcatcttcttctcctctttttcatc 18793866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 629
Target Start/End: Original strand, 40534042 - 40534092
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctt 629  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  40534042 cgttagttttaatttaaaaacgttaggttttctttatcttcttctcctctt 40534092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 10654298 - 10654241
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| | ||||||||||||    
T  10654298 cgttagttttaattcaaaaacgttaggttttcttcatcttcttttcctctttttcatc 10654241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 16267832 - 16267889
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||| ||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  16267832 cgttggttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 16267889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 30792709 - 30792652
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||| ||| |||||||||| ||||||||||||    
T  30792709 cgttagttttaattcaaaaacgttaggtttacttcatcttcttctcctctttttcatc 30792652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 31126198 - 31126141
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||||||||| || |||| |||||||||    
T  31126198 cgttagttttaattcaaaaacgttagtttttctttatcttttttttctatttttcatc 31126141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 34028838 - 34028895
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||  |||||||||||    
T  34028838 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcatctttttcatc 34028895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 5463386 - 5463330
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  5463386 gttagttttaattcaaaaatgttaggttttcttcatcttcttctcctctttttcatc 5463330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 13831290 - 13831234
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  13831290 gttagttttaattcaaaaatgttaggttttcttcatcttcttctcctctttttcatc 13831234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 14118647 - 14118691
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  14118647 cgttagttttaattcaaaaacgttaggttttctttatcttcttct 14118691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 21036103 - 21036159
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| | ||||||||||||    
T  21036103 gttagttttaattaaaaaacgttaggttttcttcatcttcttttcctctttttcatc 21036159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 29684392 - 29684352
Alignment:
Q  166 tttgagtgaaaagggagaaagatttggagaagatggtgaat 206  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  29684392 tttgagtgaaaagggagaaagatttggagaagatgatgaat 29684352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 49291251 - 49291195
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||  |||||||||||    
T  49291251 gttagttttgattcaaaaacgttagattttcttcatcttcttctcatctttttcatc 49291195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 51810406 - 51810350
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||| ||||||||||||| ||| |||||| ||||||||||||    
T  51810406 gttagttttaattcaaaaatgttagattttcttcatcctcttctcctctttttcatc 51810350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 4045366 - 4045311
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| ||||| ||||||    
T  4045366 ttagttttaattcaaaaacgttaggttttcttcatcttcttctcctcttattcatc 4045311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 6181883 - 6181828
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| |||||||| || ||||||| |||||||||| ||||||||||||    
T  6181883 ttagttttaattcaaaaacgtaaggttttcttcatcttcttctcctctttttcatc 6181828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 579 - 629
Target Start/End: Complemental strand, 23281279 - 23281229
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctt 629  Q
    |||||||||||||| |||||||||||||||| || |||||||||| |||||    
T  23281279 cgttagttttaattcaaaaacgttagatttttttcatcttcttctcctctt 23281229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 580 - 626
Target Start/End: Complemental strand, 50574785 - 50574739
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttct 626  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  50574785 gttagttttaattaaaaaacgttaggttttcttcatcttcttcttct 50574739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 9119409 - 9119466
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||| |||| |||||||||||||||||||  | ||||||| ||||||||||||    
T  9119409 cgttagtttcaattcaaaaacgttagattttcttcgtgttcttctcctctttttcatc 9119466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 14776004 - 14775947
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| ||||||||||| ||||||| |||||||||| ||| ||||||||    
T  14776004 cgttaattttaattcaaaaacgttaggttttcttcatcttcttctcctccttttcatc 14775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 19986391 - 19986334
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||| || ||||||||||||    
T  19986391 cgttagttttaattcaaaaatgttaggttttcttcatcttctcctcctctttttcatc 19986334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 36657618 - 36657675
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||  |||||||||||    
T  36657618 cgttagttttaattcaaaaacgttaggttttcttcattttcttctcatctttttcatc 36657675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 40703134 - 40703077
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| ||| | |||| ||||| ||||||    
T  40703134 cgttagttttaatttaaaaacgttagattttcttcatcatgttctcctcttcttcatc 40703077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 20260647 - 20260591
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||| ||||| ||||||    
T  20260647 gttagttttaatttaaaaacgttatgttttcttcatcttcttctcctcttcttcatc 20260591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 635
Target Start/End: Complemental strand, 25088285 - 25088229
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    |||||||||||||| ||||||||||  ||||||| |||||||||| | |||||||||    
T  25088285 cgttagttttaattcaaaaacgttaagttttcttcatcttcttctccactttttcat 25088229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 635
Target Start/End: Complemental strand, 32564219 - 32564163
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    |||||||||||||| |||||  |||| ||||||| |||||||||| |||||||||||    
T  32564219 cgttagttttaattcaaaaatattaggttttcttcatcttcttctcctctttttcat 32564163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 33753342 - 33753386
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||    
T  33753342 cgttagttttaattcaaaaacgttagcttttcttcatcttcttct 33753386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 629
Target Start/End: Original strand, 34621740 - 34621788
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctt 629  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| |||||    
T  34621740 ttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctt 34621788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 22584621 - 22584563
Alignment:
Q  579 cgttagttttaattgaaaaac-gttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||  |||||||||| || |||||||||| ||||||||||||    
T  22584621 cgttagttttaattaaaaaaatgttagatttttttcatcttcttctcctctttttcatc 22584563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 580 - 622
Target Start/End: Original strand, 24590344 - 24590386
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttc 622  Q
    ||||||||||||| ||||||||||||||||||| || ||||||    
T  24590344 gttagttttaattcaaaaacgttagattttcttcattttcttc 24590386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 636
Target Start/End: Original strand, 36884847 - 36884889
Alignment:
Q  594 aaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||    
T  36884847 aaaaacgttaggttttcttcatcttcttctcctctttttcatc 36884889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 3569494 - 3569551
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||||  |||||  |||||||||| ||||| ||||||    
T  3569494 cgttagttttaattcaaaaacgttaggatttctccatcttcttctcctcttcttcatc 3569551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 19886156 - 19886099
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||  |||||||  | ||||||| ||||||||||||    
T  19886156 cgttagttttaatttaaaaacgttatgttttcttccttttcttctcctctttttcatc 19886099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 581 - 622
Target Start/End: Complemental strand, 36657768 - 36657727
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttc 622  Q
    |||||||||||| ||||||||||||||||||| || ||||||    
T  36657768 ttagttttaattcaaaaacgttagattttcttcattttcttc 36657727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 45305679 - 45305622
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||||| ||| || || ||||||| || |||||||||    
T  45305679 cgttagttttaattaaaaaacgttagagttttttcattttcttctcctgtttttcatc 45305622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 48259060 - 48259117
Alignment:
Q  501 aaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtagaa 558  Q
    |||||||||||||||||||| |||| ||||| || |  |||||||||||||| |||||    
T  48259060 aaggtggagtatctcaccttaaaaataacgatacattcaagttgaccttcatctagaa 48259117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 620
Target Start/End: Complemental strand, 51692140 - 51692099
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttct 620  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  51692140 cgttagttttaattcaaaaacgttaggttttcttcatcttct 51692099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 1831933 - 1831889
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  1831933 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 1831889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 6181733 - 6181777
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  6181733 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 6181777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 11394929 - 11394885
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||| ||||||||||||| || |||||||    
T  11394929 cgttagttttaattcaaaaatgttagattttcttcattttcttct 11394885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 14775862 - 14775906
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  14775862 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 14775906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Original strand, 28112867 - 28112907
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttc 619  Q
    |||||||||||||| ||||||||||| ||||||| ||||||    
T  28112867 cgttagttttaattcaaaaacgttaggttttcttcatcttc 28112907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 612
Target Start/End: Original strand, 29256950 - 29256982
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctt 612  Q
    ||||||||||||| |||||||||||||||||||    
T  29256950 gttagttttaattcaaaaacgttagattttctt 29256982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 34028990 - 34028946
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  34028990 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 34028946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 42607771 - 42607727
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||| ||||||||||||| || |||||||    
T  42607771 cgttagttttaattcaaaaaggttagattttcttcattttcttct 42607727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 46738993 - 46738949
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| |||||| |||||||||||| || |||||||    
T  46738993 cgttagttttaattcaaaaacattagattttcttcattttcttct 46738949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 46950005 - 46949961
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  46950005 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 46949961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 49291110 - 49291154
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  49291110 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 49291154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 21837470 - 21837407
Alignment:
Q  273 atatataggtgaaaaggagaaattactaatttacgaaaatgccctcctataagggcaaaatggt 336  Q
    |||||||||||||||||| |||| | ||||||||||||||||||| | ||||||||||||||||    
T  21837470 atatataggtgaaaaggataaataagtaatttacgaaaatgcccttccataagggcaaaatggt 21837407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 7210573 - 7210630
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||    
T  7210573 cgttagttttaattcaaaaacgttaggttttcatcatcttcttcttctctttttcatc 7210630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 31656627 - 31656570
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  31656627 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 31656570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 10656362 - 10656306
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  10656362 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 10656306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 40589775 - 40589831
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||| ||||||||||||    
T  40589775 gttagttttaattcaaaaacgttagattttcttcatcatcttctcctctttttcatc 40589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 636
Target Start/End: Original strand, 334415 - 334470
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  334415 ttagttttaattcaaaaacgttaggttttcttcatcttcttctcctctttttcatc 334470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 636
Target Start/End: Original strand, 12593575 - 12593630
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||| | ||||||||||||||||||| |||||||||| ||||||||||||    
T  12593575 ttagttttaagtcaaaaacgttagattttcttcatcttcttctcctctttttcatc 12593630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 632
Target Start/End: Original strand, 19205060 - 19205113
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  19205060 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctcttttt 19205113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 31909047 - 31909104
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||| |||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  31909047 cgttagtttcaattcaaaaacgttaggttttcttcatcttcttcttctatttttcatc 31909104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 33763022 - 33763079
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| |||||||||| ||||||| ||||||||||||    
T  33763022 cgttagttttaattcaaaaatgttaggttttctttattttcttctcctctttttcatc 33763079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 38416403 - 38416346
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| ||||| |||| ||||||||||||    
T  38416403 cgttagttttaattcaaaaacgttaggttttcttcatcttgttctcctctttttcatc 38416346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 8344797 - 8344757
Alignment:
Q  166 tttgagtgaaaagggagaaagatttggagaagatggtgaat 206  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  8344797 tttgagtgaaaagggagaaacatttggagaagatggtgaat 8344757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 25923236 - 25923292
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||| ||||||| ||||    
T  25923236 gttagttttaattcaaaaacgttaggttttcttcatcttcttctcctcttttccatc 25923292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 39706319 - 39706263
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||| |||| ||||||||| ||||||||| |||||||||| ||||||||||||    
T  39706319 gttagtttcaattcaaaaacgttggattttcttcatcttcttctcctctttttcatc 39706263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 40589172 - 40589228
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| ||||||||||||||||||| ||  |||||| ||||||||||||    
T  40589172 gttagttttaattcaaaaacgttagattttcttcattatcttctcctctttttcatc 40589228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 42824844 - 42824884
Alignment:
Q  166 tttgagtgaaaagggagaaagatttggagaagatggtgaat 206  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  42824844 tttgagtgaaaagggagaaacatttggagaagatggtgaat 42824884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 22913707 - 22913656
Alignment:
Q  166 tttgagtgaaaagggagaaagatttggagaagatggtgaatggtggtggggg 217  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  22913707 tttgagtgaaaatggagaaatatttggagaagatggtgaatagtgggggggg 22913656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 636
Target Start/End: Original strand, 43569889 - 43569944
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  43569889 ttagttttaatttaaaaatgttaggttttcttcatcttcttctcctctttttcatc 43569944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 632
Target Start/End: Original strand, 3878598 - 3878651
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||  |||||||    
T  3878598 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcttcttttt 3878651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 582 - 635
Target Start/End: Complemental strand, 5088073 - 5088020
Alignment:
Q  582 tagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||| ||||||||||| ||||||| |||||||| | |||||||||||    
T  5088073 tagttttaattcaaaaacgttaggttttcttcatcttcttttcctctttttcat 5088020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 17861155 - 17861212
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||  ||||||| |||||||| | ||||||||||||    
T  17861155 cgttagttttaattcaaaaacgttaagttttcttcatcttcttatcctctttttcatc 17861212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 35263611 - 35263668
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||| |||||||| |||||| |||| ||||||| |||||||||| ||||||||||||    
T  35263611 cgttaattttaattaaaaaacattaggttttcttcatcttcttctcctctttttcatc 35263668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 40774606 - 40774549
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||  |||||||||| || |||||||||    
T  40774606 cgttagttttaattcaaaaacgttaggttttctccatcttcttctcctatttttcatc 40774549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 41859946 - 41859889
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||| |||||| ||||| ||||| ||||||| |||||||||| ||||||||||||    
T  41859946 cgttagtattaattcaaaaaggttaggttttcttcatcttcttctcctctttttcatc 41859889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 8418452 - 8418398
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||    
T  8418452 gttagttttaatt-aaaaacgt-aggttttctttatcttcttctcctctttttcatc 8418398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 621
Target Start/End: Complemental strand, 15670418 - 15670378
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  15670418 ttagttttaattcaaaaacgttagattttctttattttctt 15670378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 39706168 - 39706212
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||    
T  39706168 cgttagttttaattcaaaaacgttaggttttctttattttcttct 39706212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 4807753 - 4807795
Alignment:
Q  269 acatatatataggtgaaaaggagaaattactaatttacgaaaa 311  Q
    |||||||||||||||||||||| |||| | |||||||||||||    
T  4807753 acatatatataggtgaaaaggataaataagtaatttacgaaaa 4807795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 559
Target Start/End: Complemental strand, 32584373 - 32584311
Alignment:
Q  497 gaagaaggtggagtatctcaccttgaaaacaacgacacttgtaagttgaccttcatgtagaag 559  Q
    |||||||||||||| | |||||||| |||  |  ||||||| |||||||||||||||||||||    
T  32584373 gaagaaggtggagtttttcaccttggaaatgataacacttgcaagttgaccttcatgtagaag 32584311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 621
Target Start/End: Original strand, 41859794 - 41859836
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    |||||||||||||| ||||||||||||||||||| || |||||    
T  41859794 cgttagttttaattcaaaaacgttagattttcttcattttctt 41859836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 9693035 - 9693092
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| || |||||||| |||||||  ||||||| | ||||||||||||    
T  9693035 cgttagttttaattcaataacgttaggttttcttcctcttcttttcctctttttcatc 9693092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 15476528 - 15476471
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||| ||||| ||| ||| ||||| |||| ||||||||||||    
T  15476528 cgttagttttaattcaaaaatgttagttttccttcatctttttctcctctttttcatc 15476471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 580 - 621
Target Start/End: Complemental strand, 16353422 - 16353381
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttctt 621  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||    
T  16353422 gttagttttaattaaaaaacgttaggttttcttcatcttctt 16353381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 612
Target Start/End: Original strand, 26289137 - 26289170
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctt 612  Q
    |||||||||||||| |||||||||||||||||||    
T  26289137 cgttagttttaatttaaaaacgttagattttctt 26289170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 5087924 - 5087968
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  5087924 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 5087968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 636
Target Start/End: Original strand, 5152734 - 5152790
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    ||||||||||||| |||||| |||| ||||||| ||||||||||  |||| ||||||    
T  5152734 gttagttttaattcaaaaactttaggttttcttgatcttcttctcttcttcttcatc 5152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 635
Target Start/End: Original strand, 5624496 - 5624552
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    |||||||||||||| ||||||||||| ||||||| | |||| ||| || ||||||||    
T  5624496 cgttagttttaattcaaaaacgttaggttttcttcaccttcgtctcctatttttcat 5624552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 7210714 - 7210670
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  7210714 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 7210670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 12593725 - 12593681
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  12593725 cgttagttttaatttaaaaacgttaggttttcttcattttcttct 12593681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 14143625 - 14143669
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| |||||| |||| ||||||| ||||||||||    
T  14143625 cgttagttttaattcaaaaacattaggttttcttcatcttcttct 14143669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 16353271 - 16353315
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  16353271 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 16353315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 36752019 - 36752063
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  36752019 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 36752063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 40774454 - 40774498
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| |||||| |||||||||||| || |||||||    
T  40774454 cgttagttttaattcaaaaacattagattttcttcattttcttct 40774498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 611
Target Start/End: Complemental strand, 42710619 - 42710587
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttct 611  Q
    |||||||||||||| ||||||||||||||||||    
T  42710619 cgttagttttaattcaaaaacgttagattttct 42710587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 40621 - 40564
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||  |||||||||||    
T  40621 cgttagttttaattcaaaaacgttagattttcttcatcttcttctcttctttttcatc 40564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 177334 - 177277
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  177334 cgttagttttaattcaaaaacgttaggttttcttcatcttcttcttctttttttcatc 177277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 579 - 632
Target Start/End: Complemental strand, 45105 - 45052
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  45105 cgttagttttaattcaaaaacgttaggttttcttcatcttcttctcctcttttt 45052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 635
Target Start/End: Original strand, 65856 - 65912
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||||||  |||||||||| |||||||  ||||||||| |||||||||||    
T  65856 cgttagttttaattccaaaacgttaggttttcttcgtcttcttctcctctttttcat 65912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 635
Target Start/End: Original strand, 73188 - 73244
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcat 635  Q
    ||||||||||||||  |||||||||| |||||||  ||||||||| |||||||||||    
T  73188 cgttagttttaattccaaaacgttaggttttcttcgtcttcttctcctctttttcat 73244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 581 - 632
Target Start/End: Complemental strand, 11481 - 11430
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctcttttt 632  Q
    |||||||||||| ||||||||||| ||||||| ||||| |||| ||||||||    
T  11481 ttagttttaattcaaaaacgttaggttttcttcatcttattctcctcttttt 11430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 11330 - 11374
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  11330 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 11374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 581 - 636
Target Start/End: Original strand, 13660 - 13715
Alignment:
Q  581 ttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||| ||||||||||| ||||||  ||||||||||  |||||||||||    
T  13660 ttagttttaattcaaaaacgttaggttttctccatcttcttctcatctttttcatc 13715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 11756 - 11699
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| ||||||||||| |||||||||| || ||||  |||||| ||||    
T  11756 cgttagttttaattcaaaaacgttaggttttctttatatttttctcatcttttgcatc 11699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 93307 - 93364
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||||||||||||| |||||||||||  ||| || |||||||||| ||||| ||||||    
T  93307 cgttagttttaattcaaaaacgttagggttttttcatcttcttctcctcttcttcatc 93364  T

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Target: scaffold1436 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold1436
Description:

Target: scaffold1436; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 1592 - 1636
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||| ||||||| |||||||||| |||||||    
T  1592 cgttagttttaattcaaacacgttagcttttctttattttcttct 1636  T

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Target: scaffold1436; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 580 - 636
Target Start/End: Complemental strand, 1743 - 1687
Alignment:
Q  580 gttagttttaattgaaaaacgttagattttctttatcttcttcttctctttttcatc 636  Q
    |||| |||||||| ||||||||||| ||||||| ||||  |||| ||||||||||||    
T  1743 gttaattttaattcaaaaacgttaggttttcttcatctaattctcctctttttcatc 1687  T

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Target: scaffold0809 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 619
Target Start/End: Original strand, 4455 - 4495
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttc 619  Q
    |||||||||||||| ||||||||||| ||||||| ||||||    
T  4455 cgttagttttaattcaaaaacgttaggttttcttcatcttc 4495  T

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Target: scaffold0809; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Complemental strand, 4587 - 4543
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  4587 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 4543  T

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Target: scaffold0444 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 623
Target Start/End: Original strand, 11785 - 11829
Alignment:
Q  579 cgttagttttaattgaaaaacgttagattttctttatcttcttct 623  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||    
T  11785 cgttagttttaattcaaaaacgttaggttttcttcattttcttct 11829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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