View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0227-Insertion-15 (Length: 289)
Name: NF0227-Insertion-15
Description: NF0227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0227-Insertion-15 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 41545161 - 41545443
Alignment:
| Q |
7 |
agaaccaacagtatacaagaagaaagactaaacgtacagagaattcatgaaaagcattgcaatatacgtttgctagatccatttggcatcacaataattg |
106 |
Q |
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| T |
41545161 |
agaaccaacagtatacaagaagaaagactaaacgtacagagaattcatgaaaagcattgcaatatacgtttgctagatccatttggcatcacaataattg |
41545260 |
T |
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| Q |
107 |
gttgtgttcaaatctggcacatggagcataacttaaactagctacttcgagtgtgtatgcattttcagcacagtgctatgtgtccactcacactaccttt |
206 |
Q |
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| T |
41545261 |
gttgtgttcaaatctggcacatggagcataacttaaactagctacttcgagtgtgtatgcattttcagcacagtgctatgtgtccactcacactaccttt |
41545360 |
T |
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| Q |
207 |
tatccacattgccttgaagtaactcctaagacacaatcaatgaattaccaaaagtggaagaaaaaactacacaacaattcgtg |
289 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
41545361 |
tatccacattgccttgaagtaactcctaagacacactcaatgaattaccaaaagtggaaaaaaaaactacacaacaattcgtg |
41545443 |
T |
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