View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0227_high_10 (Length: 259)

Name: NF0227_high_10
Description: NF0227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0227_high_10
NF0227_high_10
[»] chr5 (23 HSPs)
chr5 (135-259)||(32091300-32091426)
chr5 (29-135)||(5348535-5348641)
chr5 (29-135)||(5347723-5347829)
chr5 (29-135)||(36429282-36429388)
chr5 (84-135)||(36430121-36430172)
chr5 (29-135)||(31808277-31808383)
chr5 (29-135)||(19897392-19897498)
chr5 (49-136)||(17641744-17641831)
chr5 (29-136)||(7491247-7491357)
chr5 (29-117)||(38561150-38561238)
chr5 (84-139)||(23093235-23093290)
chr5 (29-135)||(36681880-36681984)
chr5 (29-135)||(17640353-17640459)
chr5 (29-135)||(33136617-33136723)
chr5 (46-119)||(38559587-38559660)
chr5 (29-100)||(29500733-29500805)
chr5 (29-117)||(34088593-34088680)
chr5 (59-110)||(10326904-10326955)
chr5 (75-137)||(19898860-19898922)
chr5 (29-135)||(23094747-23094853)
chr5 (85-135)||(43492543-43492593)
chr5 (29-119)||(43492777-43492867)
chr5 (75-135)||(26626625-26626685)
[»] chr8 (15 HSPs)
chr8 (29-135)||(14791483-14791589)
chr8 (29-139)||(14790668-14790778)
chr8 (29-135)||(20112305-20112411)
chr8 (29-135)||(20111492-20111597)
chr8 (29-135)||(27242999-27243105)
chr8 (29-135)||(27254574-27254680)
chr8 (29-135)||(14864972-14865078)
chr8 (29-135)||(35124634-35124740)
chr8 (46-135)||(11681593-11681682)
chr8 (29-135)||(767613-767719)
chr8 (29-138)||(11680167-11680276)
chr8 (29-138)||(32672288-32672396)
chr8 (29-137)||(14866115-14866224)
chr8 (29-117)||(35123254-35123342)
chr8 (103-139)||(39132729-39132765)
[»] chr3 (28 HSPs)
chr3 (29-135)||(54560846-54560952)
chr3 (29-135)||(1576486-1576592)
chr3 (29-135)||(1577540-1577645)
chr3 (29-139)||(50837456-50837565)
chr3 (29-135)||(47471505-47471611)
chr3 (29-139)||(50838288-50838398)
chr3 (29-135)||(54560033-54560139)
chr3 (29-136)||(52118272-52118379)
chr3 (31-135)||(35942098-35942201)
chr3 (32-135)||(31800396-31800499)
chr3 (29-136)||(52946365-52946472)
chr3 (29-135)||(49725995-49726101)
chr3 (29-139)||(52947796-52947905)
chr3 (46-135)||(1136240-1136329)
chr3 (29-130)||(43546371-43546472)
chr3 (29-135)||(11032387-11032493)
chr3 (29-135)||(1137617-1137723)
chr3 (29-135)||(11033771-11033877)
chr3 (31-135)||(43640786-43640890)
chr3 (29-113)||(50382769-50382853)
chr3 (84-119)||(52116926-52116961)
chr3 (46-136)||(34651407-34651497)
chr3 (29-110)||(35942806-35942887)
chr3 (85-135)||(49724626-49724676)
chr3 (90-135)||(55455882-55455927)
chr3 (92-136)||(1033884-1033928)
chr3 (84-135)||(47470722-47470774)
chr3 (85-117)||(51149983-51150015)
[»] chr4 (26 HSPs)
chr4 (29-135)||(621565-621671)
chr4 (29-135)||(620470-620576)
chr4 (29-137)||(49681262-49681369)
chr4 (84-135)||(27455769-27455820)
chr4 (29-135)||(27454917-27455022)
chr4 (29-136)||(2613630-2613737)
chr4 (29-135)||(16508151-16508257)
chr4 (29-135)||(50662995-50663101)
chr4 (29-135)||(50664430-50664536)
chr4 (29-139)||(56065159-56065268)
chr4 (29-118)||(23102310-23102399)
chr4 (29-135)||(2215785-2215891)
chr4 (29-135)||(2217160-2217266)
chr4 (29-135)||(16506869-16506975)
chr4 (29-135)||(49682061-49682166)
chr4 (29-135)||(55978475-55978581)
chr4 (29-136)||(2615030-2615137)
chr4 (29-116)||(52897722-52897809)
chr4 (29-135)||(56063647-56063754)
chr4 (86-136)||(677045-677095)
chr4 (29-135)||(21225799-21225904)
chr4 (75-135)||(23100938-23100998)
chr4 (84-117)||(3880872-3880905)
chr4 (29-78)||(11147802-11147851)
chr4 (33-114)||(31633645-31633726)
chr4 (29-114)||(31779751-31779838)
[»] chr6 (15 HSPs)
chr6 (29-135)||(17732015-17732121)
chr6 (29-135)||(15348226-15348331)
chr6 (29-139)||(30710308-30710417)
chr6 (30-135)||(6008641-6008746)
chr6 (29-135)||(15347432-15347538)
chr6 (29-135)||(17732845-17732951)
chr6 (29-130)||(6009457-6009558)
chr6 (32-135)||(30709491-30709594)
chr6 (29-136)||(10917858-10917965)
chr6 (29-137)||(1387600-1387708)
chr6 (29-135)||(4138924-4139029)
chr6 (29-135)||(10919280-10919386)
chr6 (29-117)||(4137673-4137761)
chr6 (29-135)||(1378455-1378560)
chr6 (29-135)||(1386203-1386308)
[»] chr2 (8 HSPs)
chr2 (29-136)||(4592626-4592733)
chr2 (29-135)||(4593433-4593539)
chr2 (29-135)||(10256519-10256625)
chr2 (29-115)||(22539141-22539226)
chr2 (84-136)||(39618027-39618079)
chr2 (75-135)||(39619328-39619388)
chr2 (29-113)||(45114922-45115006)
chr2 (46-135)||(28780081-28780170)
[»] chr1 (18 HSPs)
chr1 (29-135)||(47444988-47445094)
chr1 (29-135)||(47445804-47445912)
chr1 (29-135)||(11343363-11343469)
chr1 (29-135)||(11501383-11501489)
chr1 (29-136)||(42813804-42813911)
chr1 (29-135)||(14282780-14282886)
chr1 (29-135)||(14284202-14284308)
chr1 (29-135)||(36476000-36476106)
chr1 (29-112)||(36475295-36475379)
chr1 (33-114)||(27585312-27585391)
chr1 (29-116)||(42813248-42813335)
chr1 (29-100)||(45575964-45576034)
chr1 (29-135)||(11341969-11342075)
chr1 (29-135)||(11499988-11500094)
chr1 (29-117)||(4564160-4564248)
chr1 (29-135)||(786735-786842)
chr1 (75-117)||(38482521-38482563)
chr1 (29-135)||(41729864-41729970)
[»] chr7 (13 HSPs)
chr7 (29-113)||(36068136-36068220)
chr7 (48-140)||(36067291-36067383)
chr7 (29-135)||(3987265-3987371)
chr7 (29-112)||(30480725-30480808)
chr7 (29-135)||(6733017-6733122)
chr7 (29-135)||(32390920-32391024)
chr7 (29-137)||(31286874-31286982)
chr7 (31-135)||(34894195-34894299)
chr7 (29-118)||(31285487-31285576)
chr7 (29-112)||(24240589-24240672)
chr7 (29-136)||(35393162-35393269)
chr7 (46-135)||(35394737-35394826)
chr7 (29-140)||(6733167-6733277)
[»] scaffold0102 (2 HSPs)
scaffold0102 (29-135)||(33173-33280)
scaffold0102 (30-135)||(32351-32457)
[»] scaffold0096 (1 HSPs)
scaffold0096 (103-135)||(35100-35132)
[»] scaffold0006 (1 HSPs)
scaffold0006 (92-136)||(43458-43502)


Alignment Details
Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 135 - 259
Target Start/End: Complemental strand, 32091426 - 32091300
Alignment:
Q  135 cttttggatatatatgtttctaaaatattttctta--gtttttcgactcattatatcccattaaattaagacgtatttaattttaacttttatcatcaaa 232  Q
    |||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32091426 cttttgtatatatatgtttctaaaatattttcttatagtttttcgactcattatatcccattaaattaagacgtatttaattttaacttttatcatcaaa 32091327  T
Q  233 tcatatagcaatattataagagtaata 259  Q
    |||||||||||||||||||||||||||    
T  32091326 tcatatagcaatattataagagtaata 32091300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 5348535 - 5348641
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5348535 aattgactaacgtttgtcaatttcagggggttttttgaagtttcctaaaaatcaggggggtttttgacgaaagctacaatttcaggggggtttttgccta 5348634  T
Q  129 tttactc 135  Q
    |||||||    
T  5348635 tttactc 5348641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 5347829 - 5347723
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||  |||||||||||  |||||||| |||| ||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  5347829 aattgactaacgtttgataatttcaggggggtttttgaagtttcttaaaaatcaggggggtttttgacgaaagttacaatttcagaggggtttttgccta 5347730  T
Q  129 tttactc 135  Q
    || ||||    
T  5347729 ttcactc 5347723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 36429388 - 36429282
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||| |||||||  |||||||||||  |||||||| |||| ||||||||| |||| ||||||||||||| ||||||||||||||| |||| |||||    
T  36429388 aattgactgacgtttgataatttcaggggcgtttttgaagtttcttaaaaatcagggggatttttgacgaaagttacaatttcagggggtttttggccta 36429289  T
Q  129 tttactc 135  Q
    || ||||    
T  36429288 ttcactc 36429282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 36430121 - 36430172
Alignment:
Q  84 gggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36430121 gggggtttttgacgaaagctacaatttcaagggggtttttgcctatttactc 36430172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 31808383 - 31808277
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||  |||||||||| || |||||||| |||| ||||||||| ||   ||||||||||||| ||||| ||||||| | ||||||||||    
T  31808383 aattgactaacgtttaacaatttcaggagagtttttgaagtttcttaaaaatcagggaaatttttgacgaaagttacaaattcagggagatttttgccta 31808284  T
Q  129 tttactc 135  Q
    || ||||    
T  31808283 ttcactc 31808277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 19897498 - 19897392
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  19897498 aattgacagacgcttgacaatttcaggggggtttttgacattttacaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 19897399  T
Q  129 tttactc 135  Q
    |||||||    
T  19897398 tttactc 19897392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 17641744 - 17641831
Alignment:
Q  49 tttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactct 136  Q
    |||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||||||||||    
T  17641744 tttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgactatttactct 17641831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 7491357 - 7491247
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttg---aaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgc 125  Q
    |||||||||||||||  |||||||||||| ||||||    || |||| ||||| ||| || | ||||||||||||| |||||||| ||| |||| |||||    
T  7491357 aattgactaacgtttcacaatttcaggggtttttttttttaagtttcttaaaagtcagggtgatttttgacgaaagttacaattttaggagggtgtttgc 7491258  T
Q  126 ctatttactct 136  Q
    ||||| |||||    
T  7491257 ctattcactct 7491247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 38561150 - 38561238
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggg 117  Q
    |||||||  ||| ||| |||||||||||| |||||||| ||||   |||| |||  ||||||||||||||||| |||||||||||||||    
T  38561150 aattgacagacgcttgacaatttcagggggttttttgacattttgcaaaattcagaggggtttttgacgaaagttacaatttcaggggg 38561238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 23093290 - 23093235
Alignment:
Q  84 gggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactctttt 139  Q
    |||| ||||||||||||| |||||||||||||||||  ||| ||||||||||||||    
T  23093290 ggggttttttgacgaaagttacaatttcaggggggtaattgactatttactctttt 23093235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 36681880 - 36681984
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||| |||||||| |||    |||||| |||  ||||||||| |||| ||||| ||||||| |||||||||| |||| |||||| |||    
T  36681880 aattgactaacgtttgacaatttcatggg--ggtttgaagttttttaaaaatcagggggatttttaacgaaagttacaatttcaaggggatttttgtcta 36681977  T
Q  129 tttactc 135  Q
    || ||||    
T  36681978 ttcactc 36681984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 17640459 - 17640353
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||    ||| ||| |||| ||||||||||||| |||||||||||||||||  ||| |||    
T  17640459 aattgacagacgcttgacaatttcaggggggtttttgacattttaccaaattcagggggatttttgacgaaagttacaatttcaggggggtaattgacta 17640360  T
Q  129 tttactc 135  Q
    |||||||    
T  17640359 tttactc 17640353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 33136617 - 33136723
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||  ||||||||||||| |||||||| |||   |||||| | || | |||||||| |||| |||| |||||  ||| ||||||||||    
T  33136617 aattgactaacgtttaacaatttcaggggagtttttgaagttttgcaaaaattagggagttttttgacaaaagttacactttcaaagggatttttgccta 33136716  T
Q  129 tttactc 135  Q
    || ||||    
T  33136717 ttcactc 33136723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 38559660 - 38559587
Alignment:
Q  46 caatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggt 119  Q
    ||||||||||||  ||||||| ||||   |||| ||| ||| |||||||||||||| |||||||||||||||||    
T  38559660 caatttcaggggggtttttgacattttgcaaaattcaggggagtttttgacgaaagttacaatttcaggggggt 38559587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 29500733 - 29500805
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggg-gtttttgacgaaa 100  Q
    |||||||||||||||| |||||||| ||  ||||||||| |||| ||||| | |||||| |||||||||||||    
T  29500733 aattgactaacgtttgacaatttcaaggatttttttgaactttcttaaaagttatggggagtttttgacgaaa 29500805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 34088680 - 34088593
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggg 117  Q
    |||||||  ||| ||| |||||||||||| ||||| || ||||   |||| ||| |||||||||||||||||| |||||||||||||||    
T  34088680 aattgacagacgcttgacaatttcagggggttttt-gacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggg 34088593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 10326904 - 10326955
Alignment:
Q  59 ttttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaattt 110  Q
    |||||| || |||| |||||||||||| ||||||||||||||| ||||||||    
T  10326904 tttttttaagtttcttaaaaatcatggaggtttttgacgaaagttacaattt 10326955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 19898860 - 19898922
Alignment:
Q  75 aaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactctt 137  Q
    |||| ||| ||||||||||||| |||| |||||||| ||||||||  ||| ||||||||||||    
T  19898860 aaaattcaggggggtttttgacaaaagttacaattttaggggggtaattgactatttactctt 19898922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 23094747 - 23094853
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| | || ||||||||||||| |||||||||| ||||||  ||| |||    
T  23094747 aattgacatacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggaggttttttgacgaaagttacaatttcaagggggtaattgacta 23094846  T
Q  129 tttactc 135  Q
    |||||||    
T  23094847 tttactc 23094853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 43492593 - 43492543
Alignment:
Q  85 ggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    ||||||||||||||||| ||||||||||||| |||  ||| ||||||||||    
T  43492593 ggggtttttgacgaaagttacaatttcagggaggtaattgactatttactc 43492543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 43492777 - 43492867
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggt 119  Q
    |||||||  ||| ||| ||||||||||||  |||||||  |||   |||| ||| ||||| |||||||||||| |||||||||||||||||    
T  43492777 aattgacagacgcttgacaatttcagggggatttttgatgttttgcaaaattcagggggggttttgacgaaagttacaatttcaggggggt 43492867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 26626625 - 26626685
Alignment:
Q  75 aaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    |||| ||| ||| |||||||||||||| ||||||||||||||| |  ||| ||||||||||    
T  26626625 aaaattcaggggagtttttgacgaaagttacaatttcagggggataattgactatttactc 26626685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 14791483 - 14791589
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14791483 aattgactaacgtttgtcaatttcagggggttttttgaagtttcctaaaaatcaggggggtttttgacgaaagctacaatttcaggggggtttttgccta 14791582  T
Q  129 tttactc 135  Q
    |||||||    
T  14791583 tttactc 14791589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 14790778 - 14790668
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||  |||||||||||  |||||||| |||| ||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  14790778 aattgactaacgtttgataatttcaggggggtttttgaagtttcttaaaaatcaggggggtttttgacgaaagttacaatttcagggggttttttgccta 14790679  T
Q  129 tttactctttt 139  Q
    |||||||||||    
T  14790678 tttactctttt 14790668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 20112305 - 20112411
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||  |||||||| ||  |||||||| |||| ||||||||| |||  ||||| ||||||| ||||||||||| ||||||||||||||    
T  20112305 aattgactaacgtttgataatttcagtggggtttttgaagtttcttaaaaatcaggggttttttttacgaaagttacaatttcagaggggtttttgccta 20112404  T
Q  129 tttactc 135  Q
    || ||||    
T  20112405 ttcactc 20112411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 20111597 - 20111492
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttc-aggggggtttttgcct 127  Q
    |||||||||| ||||| |||||| ||| |  |||||||||||||||||||||  | |||| |||||||||||||||||||| | ||||| ||||||||||    
T  20111597 aattgactaatgtttgacaattttaggaggatttttgaaatttcctaaaaat--tagggggttttgacgaaagctacaattacaaggggagtttttgcct 20111500  T
Q  128 atttactc 135  Q
    ||||||||    
T  20111499 atttactc 20111492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 27242999 - 27243105
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||| ||||||| ||||   |||| |||||||||||||||||||||| || ||||||||||||||  ||| |||    
T  27242999 aattgacggacgcttgacaatttcaggggagtttttgacattttgcaaaattcatgggggtttttgacgaaagttataatttcaggggggtaattgacta 27243098  T
Q  129 tttactc 135  Q
    |||||||    
T  27243099 tttactc 27243105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 27254574 - 27254680
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||| ||||||| ||||   |||| |||||||||||||||||||||| || ||||||||||||||  ||| |||    
T  27254574 aattgacggacgcttgacaatttcaggggagtttttgacattttgcaaaattcatgggggtttttgacgaaagttataatttcaggggggtaattgacta 27254673  T
Q  129 tttactc 135  Q
    |||||||    
T  27254674 tttactc 27254680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 14865078 - 14864972
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  14865078 aattgacagacgcttgacaatttcaggggggtttttgacattttacaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 14864979  T
Q  129 tttactc 135  Q
    |||||||    
T  14864978 tttactc 14864972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 35124634 - 35124740
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  35124634 aattgacagacgcttgacaatttcagggggatttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 35124733  T
Q  129 tttactc 135  Q
    |||||||    
T  35124734 tttactc 35124740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 11681593 - 11681682
Alignment:
Q  46 caatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| ||||||||||    
T  11681593 caatttcaggggggtttttgacattttgcaaaattcaagggggtttttgacgaaagttacaatttcaggggggtaattgactatttactc 11681682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 767613 - 767719
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||| ||  ||| |||    
T  767613 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggagtaattgacta 767712  T
Q  129 tttactc 135  Q
    |||||||    
T  767713 tttactc 767719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 11680276 - 11680167
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||| ||||||||||||| |||||||||||| ||||  ||| |||    
T  11680276 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcagggggatttttgacgaaagttacaatttcaggagggtaattgacta 11680177  T
Q  129 tttactcttt 138  Q
    ||||||||||    
T  11680176 tttactcttt 11680167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 32672396 - 32672288
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| ||||||||||| |||||  ||| |||    
T  32672396 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcag-ggggtaattgacta 32672298  T
Q  129 tttactcttt 138  Q
    ||||||||||    
T  32672297 tttactcttt 32672288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 14866115 - 14866224
Alignment:
Q  29 aattgactaacgtttgtcaatttcag-gggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcct 127  Q
    |||||||  ||| ||| ||||||||| |||| ||||||| ||||   |||| ||| |||| ||||||| ||||| |||||||||||||||||  ||| ||    
T  14866115 aattgacagacgcttgacaatttcagagggagtttttgacattttgcaaaattcagggggatttttgaagaaagttacaatttcaggggggtaattgact 14866214  T
Q  128 atttactctt 137  Q
    ||||||||||    
T  14866215 atttactctt 14866224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 35123342 - 35123254
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggg 117  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||| ||||||||||||| |||||||||||||||    
T  35123342 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcagggggatttttgacgaaagttacaatttcaggggg 35123254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 39132765 - 39132729
Alignment:
Q  103 tacaatttcaggggggtttttgcctatttactctttt 139  Q
    |||||||||||||||||  ||||||||||||||||||    
T  39132765 tacaatttcaggggggtaattgcctatttactctttt 39132729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 54560846 - 54560952
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  54560846 aattgactaacgtttgtcaatttcagggggttttttgaagtttcctaaaaatcaggggggtttttgacgaaagctacaatttcaggggggtttttgccta 54560945  T
Q  129 tttactc 135  Q
    |||||||    
T  54560946 tttactc 54560952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 1576592 - 1576486
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1576592 aattgactaacgtttgtcaatttcaggggggtttttgaagtttcctaaaaatcaggggggtttttgacgaaagctacaatttcaggggggtttttgccta 1576493  T
Q  129 tttactc 135  Q
    |||||||    
T  1576492 tttactc 1576486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 1577540 - 1577645
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  1577540 aattgactaacgtttgtcaatttcagggggttttt-gaagtttcctaaaaatcaggggggtttttgacgaaagctacaatttcaggggggtttttgacta 1577638  T
Q  129 tttactc 135  Q
    |||||||    
T  1577639 tttactc 1577645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 50837565 - 50837456
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  50837565 aattgactaacgtttgtcaatttcagggggttttt-gaaattttctaaaaatcaggggggtttttgacgaaagttacaatttcagggggatttttgccta 50837467  T
Q  129 tttactctttt 139  Q
    || ||||||||    
T  50837466 ttcactctttt 50837456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 47471505 - 47471611
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||| ||||||||||||  |||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||| ||||||||||    
T  47471505 aattgactaacgtttggcaatttcaggggggtttttgaagtttcctaaaaatcagggggggttttgacgaaagctacaatttcaaggggttttttgccta 47471604  T
Q  129 tttactc 135  Q
    |||||||    
T  47471605 tttactc 47471611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 50838288 - 50838398
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||  |||||||||||| |||||||| |||| ||||||| | |||||||||||||||||| ||||||||||||||| ||||||||||    
T  50838288 aattgactaacgtttgataatttcaggggagtttttgaagtttcttaaaaattaggggggtttttgacgaaagttacaatttcagggggatttttgccta 50838387  T
Q  129 tttactctttt 139  Q
    || ||||||||    
T  50838388 ttcactctttt 50838398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 54560139 - 54560033
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||  ||||||| |||  |||||||| |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  54560139 aattgactaacgtttgataatttcatgggggtttttgaagtttcttaaaaatcaggggggtttttgacgaaagttacaatttcaggggggtttttgccta 54560040  T
Q  129 tttactc 135  Q
    || ||||    
T  54560039 ttcactc 54560033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 52118272 - 52118379
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| |||||||||||||||||||||| |||||||||||||||||  ||| |||    
T  52118272 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcatgggggtttttgacgaaagttacaatttcaggggggtaattgacta 52118371  T
Q  129 tttactct 136  Q
    ||||||||    
T  52118372 tttactct 52118379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 35942201 - 35942098
Alignment:
Q  31 ttgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatt 130  Q
    |||||||||||||| ||||||||||||| ||||  || |||| ||||||||| | | |||||||||||||| |||||||| ||||||  |||||||||||    
T  35942201 ttgactaacgtttgacaatttcaggggagtttta-aagtttcttaaaaatcaggagagtttttgacgaaagttacaattttagggggagttttgcctatt 35942103  T
Q  131 tactc 135  Q
     ||||    
T  35942102 cactc 35942098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 31800396 - 31800499
Alignment:
Q  32 tgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctattt 131  Q
    ||||||||||||  |||||| |  ||| |||| ||| |||| |||||||||||||  ||||||||||||| ||||||||| |||| |||||||||||||     
T  31800396 tgactaacgtttcacaattttataggagttttagaagtttcttaaaaatcatgggattttttgacgaaagttacaatttcgggggagtttttgcctattc 31800495  T
Q  132 actc 135  Q
    ||||    
T  31800496 actc 31800499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 52946472 - 52946365
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  52946472 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 52946373  T
Q  129 tttactct 136  Q
    ||||||||    
T  52946372 tttactct 52946365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 49725995 - 49726101
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  49725995 aattgacagacgcttgacaatttcagggggatttttgacattttacaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 49726094  T
Q  129 tttactc 135  Q
    |||||||    
T  49726095 tttactc 49726101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 52947796 - 52947905
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||||||||||| ||||| || ||||  ||||| |||  ||||||||||||||||| |||||||||||||||||  ||| |||    
T  52947796 aattgacagacgcttgacaatttcagggggttttt-gacattttgtaaaattcagaggggtttttgacgaaagttacaatttcaggggggtaattgacta 52947894  T
Q  129 tttactctttt 139  Q
    |||||||||||    
T  52947895 tttactctttt 52947905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 1136329 - 1136240
Alignment:
Q  46 caatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| ||||||||||    
T  1136329 caatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgactatttactc 1136240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 43546472 - 43546371
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||| |||||||  |||||||| ||  |||||||| |||| ||||||||| |  | ||||||||||||| ||||||||||| || |||||||||||    
T  43546472 aattgactgacgtttgataatttcagaggggtttttgaagtttcttaaaaatcaggaagatttttgacgaaagttacaatttcagaggagtttttgccta 43546373  T
Q  129 tt 130  Q
    ||    
T  43546372 tt 43546371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 11032493 - 11032387
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| || ||||||||||||||  ||| |||    
T  11032493 aattgacagacgcttgacaatttcaggggggtttttgacattttacaaaattcaggggggtttttgacgaaagttaaaatttcaggggggtaattgacta 11032394  T
Q  129 tttactc 135  Q
    |||||||    
T  11032393 tttactc 11032387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 1137617 - 1137723
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||   |||||| ||||   |||| ||| |||||||||||||||||| |||||||||| ||||||  ||| |||    
T  1137617 aattgacagacgcttgacaatttcagggggggttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaagggggtaattgacta 1137716  T
Q  129 tttactc 135  Q
    |||||||    
T  1137717 tttactc 1137723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 11033771 - 11033877
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||||||||||| |||||||| ||||   |||| ||| |||  ||||||||||||| |||||||||| ||||||  ||| |||    
T  11033771 aattgacagacgcttgacaatttcaggggtttttttgacattttacaaaattcaggggattttttgacgaaagttacaatttcaagggggtaattgacta 11033870  T
Q  129 tttactc 135  Q
    |||||||    
T  11033871 tttactc 11033877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 43640890 - 43640786
Alignment:
Q  31 ttgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatt 130  Q
    |||||| ||||||| |||||||||||   |||||||| |||   |||| ||| |||  |||||||||||||||||||||| || |||||  ||| |||||    
T  43640890 ttgactgacgtttgacaatttcagggttctttttgaagttttgcaaaattcaggggtttttttgacgaaagctacaattttagtggggtaattgactatt 43640791  T
Q  131 tactc 135  Q
    |||||    
T  43640790 tactc 43640786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 50382769 - 50382853
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcag 113  Q
    |||||||||||||||| | |||||| |||  | |||||| |||| ||||| ||| ||| |||||||||||||| ||| |||||||    
T  50382769 aattgactaacgtttgaccatttcatgggggtgtttgaagtttcttaaaagtcaggggagtttttgacgaaagttacgatttcag 50382853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 119
Target Start/End: Complemental strand, 52116961 - 52116926
Alignment:
Q  84 gggggtttttgacgaaagctacaatttcaggggggt 119  Q
    |||||||||||||||||| |||||||||||||||||    
T  52116961 gggggtttttgacgaaagttacaatttcaggggggt 52116926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 34651407 - 34651497
Alignment:
Q  46 caatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactct 136  Q
    ||||||||||||  ||||||| ||||   |||| ||| ||||||||||||  |||| ||||||||||||| |||  ||| |||||||||||    
T  34651407 caatttcaggggggtttttgacattttgcaaaattcaggggggtttttgataaaagttacaatttcagggaggtaattgactatttactct 34651497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 35942806 - 35942887
Alignment:
Q  29 aattgactaacgtttgtcaatttc-aggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaattt 110  Q
    |||||||||||||||  ||||||| ||||| ||||||||| |||| ||||| ||| |||| ||||||||||||  ||||||||    
T  35942806 aattgactaacgtttaacaatttcaaggggtttttttgaagtttcataaaagtca-ggggatttttgacgaaaattacaattt 35942887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 49724676 - 49724626
Alignment:
Q  85 ggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    ||||||||||||||||  |||||||||||||||||  ||| ||||||||||    
T  49724676 ggggtttttgacgaaaattacaatttcaggggggtaattgactatttactc 49724626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 55455927 - 55455882
Alignment:
Q  90 ttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    ||||| ||||||||||||||||||||||||  ||| ||||||||||    
T  55455927 ttttggcgaaagctacaatttcaggggggtaattgactatttactc 55455882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 1033884 - 1033928
Alignment:
Q  92 ttgacgaaagctacaatttcaggggggtttttgcctatttactct 136  Q
    |||||||||  |||||||||||||||||  |||||||||||||||    
T  1033884 ttgacgaaacttacaatttcaggggggtaattgcctatttactct 1033928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 47470774 - 47470722
Alignment:
Q  84 gggggtttttgacgaaagctacaatttcagggggg-tttttgcctatttactc 135  Q
    |||| ||||||||||||| |||||||||||||||| |||||||| ||| ||||    
T  47470774 ggggatttttgacgaaagttacaatttcaggggggatttttgcccattcactc 47470722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Complemental strand, 51150015 - 51149983
Alignment:
Q  85 ggggtttttgacgaaagctacaatttcaggggg 117  Q
    ||||||||||||||||| |||||||||||||||    
T  51150015 ggggtttttgacgaaagttacaatttcaggggg 51149983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 621565 - 621671
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  621565 aattgactaacgtttgtcaatttcaggggggtttttgaagtttcctaaaaatcaggggggtttttgacgaaagctacaatttcaggggggtttttgccta 621664  T
Q  129 tttactc 135  Q
    |||||||    
T  621665 tttactc 621671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 620576 - 620470
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||| |||| |||||||||||| |||||||||||| ||||||||||||||    
T  620576 aattgactaacgtttgtcaatttcaggggggtttttgaagtttcctaaaaatcagggggatttttgacgaaaactacaatttcagaggggtttttgccta 620477  T
Q  129 tttactc 135  Q
    |||||||    
T  620476 tttactc 620470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 49681369 - 49681262
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||| |||| |||||| ||||||||| ||  |||||||| ||| |||||||||| ||| ||||||||| ||||||||||||| ||||| |||||||||||    
T  49681369 aattaactagcgtttgacaatttcagaggggtttttgaagttttctaaaaatcaggggagtttttgacaaaagctacaattt-aggggagtttttgccta 49681271  T
Q  129 tttactctt 137  Q
    |||||||||    
T  49681270 tttactctt 49681262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 27455769 - 27455820
Alignment:
Q  84 gggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27455769 gggggtttttgacgaaagctacaatttcaagggggtttttgcctatttactc 27455820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 27455022 - 27454917
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||| |||||||  |||||||  ||  ||||| || |||| ||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  27455022 aattgactgacgtttgataatttcaaaggggtttttcaagtttcttaaaaatcaggggggtttttgacgaaagttacaatttcag-ggggtttttgccta 27454924  T
Q  129 tttactc 135  Q
    || ||||    
T  27454923 ttcactc 27454917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 2613737 - 2613630
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  2613737 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 2613638  T
Q  129 tttactct 136  Q
    ||||||||    
T  2613637 tttactct 2613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 16508151 - 16508257
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  16508151 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 16508250  T
Q  129 tttactc 135  Q
    |||||||    
T  16508251 tttactc 16508257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 50663101 - 50662995
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  50663101 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 50663002  T
Q  129 tttactc 135  Q
    |||||||    
T  50663001 tttactc 50662995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 50664430 - 50664536
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  50664430 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 50664529  T
Q  129 tttactc 135  Q
    |||||||    
T  50664530 tttactc 50664536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 56065159 - 56065268
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| |||||||||||||||||||||| |||||||||| ||||||  ||| |||    
T  56065159 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcatgggggtttttgacgaaagttacaatttca-gggggtaattgacta 56065257  T
Q  129 tttactctttt 139  Q
    |||||||||||    
T  56065258 tttactctttt 56065268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 23102310 - 23102399
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcagggggg 118  Q
    ||||||| |||| ||| ||||||||||||  | |||||| |||   |||| ||| |||||||||||||||||||||||||||||||||||    
T  23102310 aattgacaaacgcttgacaatttcaggggggtatttgaagttttgcaaaattcaggggggtttttgacgaaagctacaatttcagggggg 23102399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 2215891 - 2215785
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||||| |||||||||||||||| |||||||| ||||||||  ||| |||    
T  2215891 aattgacagacgcttggcaatttcaggggggtttttgacattttgcaaaattcatgagggtttttgacgaaagttacaattttaggggggtaattgacta 2215792  T
Q  129 tttactc 135  Q
    |||||||    
T  2215791 tttactc 2215785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 2217160 - 2217266
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| |||||| ||||||||||||||| |||||||||| ||||||  ||| |||    
T  2217160 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcatggaggtttttgacgaaagttacaatttcaagggggtaattgacta 2217259  T
Q  129 tttactc 135  Q
    |||||||    
T  2217260 tttactc 2217266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 16506975 - 16506869
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||| ||||||||||||| |||||||||||||||||  ||| |||    
T  16506975 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcagggggttttttgacgaaagttacaatttcaggggggtaattgacta 16506876  T
Q  129 tttactc 135  Q
    |||||||    
T  16506875 tttactc 16506869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 49682061 - 49682166
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||| |||  ||||||||||||||||| ||| |||| ||||||| | ||   ||||||||||||| |||||||||| | || ||||||||||    
T  49682061 aattgactaacgattgataatttcaggggattttt-gaagtttcttaaaaattagggaattttttgacgaaagttacaatttcaagaggatttttgccta 49682159  T
Q  129 tttactc 135  Q
    || ||||    
T  49682160 ttcactc 49682166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 55978581 - 55978475
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| ||| |||||||||||||| |||||||||||||||||  ||| |||    
T  55978581 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggagtttttgacgaaagttacaatttcaggggggtaattgacta 55978482  T
Q  129 tttactc 135  Q
    |||||||    
T  55978481 tttactc 55978475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 2615030 - 2615137
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||||| |  ||||||||||||| |||||||||||||||||  ||| |||    
T  2615030 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcatgtgtttttttgacgaaagttacaatttcaggggggtaattgacta 2615129  T
Q  129 tttactct 136  Q
    ||||||||    
T  2615130 tttactct 2615137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 52897722 - 52897809
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcagggg 116  Q
    |||||||  ||| ||| ||||||||| || |||||||| ||||   |||| ||| |||||||||||||||||| ||||||||||||||    
T  52897722 aattgaccgacgcttgacaatttcagaggtttttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcagggg 52897809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 56063754 - 56063647
Alignment:
Q  29 aattgactaacgtttgtcaatttcagggga-ttttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcct 127  Q
    |||||||  ||| ||| ||||||||||||  |||||||| ||||   |||| ||| |||||||||||| ||||| |||||||||||||||||  ||| ||    
T  56063754 aattgacagacgcttgacaatttcaggggggttttttgacattttgcaaaattcaggggggtttttgatgaaagttacaatttcaggggggtaattgact 56063655  T
Q  128 atttactc 135  Q
    ||||||||    
T  56063654 atttactc 56063647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 677095 - 677045
Alignment:
Q  86 gggtttttgacgaaagctacaatttcaggggggtttttgcctatttactct 136  Q
    |||||||||||||||| |||||||||||||||||  ||| |||||||||||    
T  677095 gggtttttgacgaaagttacaatttcaggggggtaattgactatttactct 677045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 21225904 - 21225799
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||| ||||| ||||||||  ||  ||||| || |||| ||||||||| |  | ||||||||||||| |||||||||||| ||| |||||||||    
T  21225904 aattgactaaggtttgacaatttcaaaggtgtttttaaagtttcttaaaaatcaagaagatttttgacgaaagttacaatttcaggtggg-ttttgccta 21225806  T
Q  129 tttactc 135  Q
    || ||||    
T  21225805 ttcactc 21225799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 23100998 - 23100938
Alignment:
Q  75 aaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||  ||| ||||||||||    
T  23100998 aaaattcaggggggtttttgacgaaaggtacaattttaggggggtaattgactatttactc 23100938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 117
Target Start/End: Complemental strand, 3880905 - 3880872
Alignment:
Q  84 gggggtttttgacgaaagctacaatttcaggggg 117  Q
    |||||||||||||||||| |||||||||||||||    
T  3880905 gggggtttttgacgaaagttacaatttcaggggg 3880872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 11147851 - 11147802
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaa 78  Q
    |||||||||||||||| |||||||| |||| |||||||| |||| |||||    
T  11147851 aattgactaacgtttgacaatttcaagggaatttttgaagtttcttaaaa 11147802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 31633645 - 31633726
Alignment:
Q  33 gactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcagg 114  Q
    |||||| ||||| |||||| | |||  |||||||| |||| ||||||| | |||||||||||||||||  | ||||||||||    
T  31633645 gactaatgtttgacaattttatgggggtttttgaagtttcttaaaaattaagggggtttttgacgaaacttccaatttcagg 31633726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 31779838 - 31779751
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggatttttt--gaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcagg 114  Q
    |||||||||||||||  |||||||||||  ||||||  |||||||   |||||||| | || |||||||| |||| ||||||||||||    
T  31779838 aattgactaacgtttaacaatttcagggttttttttttgaaattttgcaaaaatcaggaggatttttgacaaaagttacaatttcagg 31779751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 9e-42; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 17732121 - 17732015
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  17732121 aattgactaacgtttgtcaatttcagggggttttttgaaattttctaaaaatcagggggatttttgacgaaaactacaatttcaggggggtttttgccta 17732022  T
Q  129 tttactc 135  Q
    |||||||    
T  17732021 tttactc 17732015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 15348226 - 15348331
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  15348226 aattgactaacgtttgtcaatttcagggggttttttgaagtttcctaaaaatca-ggggatttttgacgaaagctacaatttcaggggggtttctgccta 15348324  T
Q  129 tttactc 135  Q
    |||||||    
T  15348325 tttactc 15348331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 30710308 - 30710417
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||| |||||||||||| ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  30710308 aattgactaacgtttggcaatttcagggggttttt-gaagtttcctaaaaatcaggggggtttttgacgaaagctacaatttcaagggggtttttgccta 30710406  T
Q  129 tttactctttt 139  Q
    |||||||||||    
T  30710407 tttactctttt 30710417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 6008746 - 6008641
Alignment:
Q  30 attgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctat 129  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||  |||||||||||    
T  6008746 attgactaacgtttgtcaatttcagggggctttttgaagtttcctaaaaatcagggaggtttttgacgaaagctacaatttcaggggtttttttgcctat 6008647  T
Q  130 ttactc 135  Q
    ||||||    
T  6008646 ttactc 6008641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 15347538 - 15347432
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||  |||||||||||  |||||||| |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15347538 aattgactaacgtttgataatttcaggggggtttttgaagtttcttaaaaatcaggggggtttttgacgaaagttacaatttcaggggggtttttgccta 15347439  T
Q  129 tttactc 135  Q
    |||||||    
T  15347438 tttactc 15347432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 17732845 - 17732951
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||| ||||||||||  |||||||||||  |||||||| |||| ||||||||| |||| ||||||||||||| |||||||||| ||||| |||||||||    
T  17732845 aattggctaacgtttgataatttcaggggggtttttgaagtttcttaaaaatcagggggttttttgacgaaagttacaatttcaaggggggttttgccta 17732944  T
Q  129 tttactc 135  Q
    || ||||    
T  17732945 ttcactc 17732951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 6009457 - 6009558
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||  |||||||||||| |||||||| |||| ||||||||| |   |||||||||||||| || ||||||| |||||||||||||||    
T  6009457 aattgactaacgtttgataatttcaggggagtttttgaagtttcttaaaaatcaggaaagtttttgacgaaagttataatttcaagggggtttttgccta 6009556  T
Q  129 tt 130  Q
    ||    
T  6009557 tt 6009558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 30709594 - 30709491
Alignment:
Q  32 tgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctattt 131  Q
    ||||| |||||||  |||||||| ||  |||||||| |||| ||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||     
T  30709594 tgactgacgtttgataatttcagaggcgtttttgaagtttcttaaaaatcagggggatttttgacgaaagttacaatttcagaggggtttttgcctattc 30709495  T
Q  132 actc 135  Q
    ||||    
T  30709494 actc 30709491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 10917965 - 10917858
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  10917965 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtgattgacta 10917866  T
Q  129 tttactct 136  Q
    ||||||||    
T  10917865 tttactct 10917858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 1387600 - 1387708
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||||||| |||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  1387600 aattgacagacgcttgacaatttcaagggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 1387699  T
Q  129 tttactctt 137  Q
    |||||||||    
T  1387700 tttactctt 1387708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 4138924 - 4139029
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||||||||||| ||||| || ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  4138924 aattgaccgacgcttgacaatttcagggggttttt-gacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 4139022  T
Q  129 tttactc 135  Q
    |||||||    
T  4139023 tttactc 4139029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 10919280 - 10919386
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||||| |||||||||||||||| |||||||||||||| ||  ||| |||    
T  10919280 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcatgtgggtttttgacgaaagttacaatttcaggggagtaattgacta 10919379  T
Q  129 tttactc 135  Q
    |||||||    
T  10919380 tttactc 10919386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 4137761 - 4137673
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggg 117  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||    
T  4137761 aattgacagacgcttgacaatttcaggggggtttttgacattttacaaaattcaggggggtttttgacgaaagttacaatttcaggggg 4137673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 1378560 - 1378455
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||||||||||| ||||| || ||||   |||| ||| |||||||||||||||||| |||||||||||  ||||  ||| |||    
T  1378560 aattgacagacgcttgacaatttcagggggttttt-gacattttgcaaaattcaagggggtttttgacgaaagttacaatttcagaagggtaattgacta 1378462  T
Q  129 tttactc 135  Q
    |||||||    
T  1378461 tttactc 1378455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 1386308 - 1386203
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||||||||||| ||||| || ||||   |||| ||| |||||||||||||||||| |||||||||||  ||||  ||| |||    
T  1386308 aattgacagacgcttgacaatttcagggggttttt-gacattttgcaaaattcaagggggtttttgacgaaagttacaatttcagaagggtaattgacta 1386210  T
Q  129 tttactc 135  Q
    |||||||    
T  1386209 tttactc 1386203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 4592733 - 4592626
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||  ||||||| |||  |||||||| |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  4592733 aattgactaacgtttgataatttcatgggggtttttgaagtttcttaaaaatcaggggggtttttgacgaaagttacaatttcaggggggtttttgccta 4592634  T
Q  129 tttactct 136  Q
    || |||||    
T  4592633 ttcactct 4592626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 4593433 - 4593539
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcagggg-ggtttttgcct 127  Q
    |||||||| |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||   |||||||||    
T  4593433 aattgactgacgtttgtcaatttcagggggttttttgaagtttcctaaaaatca-gggggtttttgacgaaagctacattttcaggggttttttttgcct 4593531  T
Q  128 atttactc 135  Q
    ||||||||    
T  4593532 atttactc 4593539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 10256519 - 10256625
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttc-aggggggtttttgcct 127  Q
    |||||||||||||||| |||||||||||| ||||| ||| ||||||| |||||| |||||||||||||||||||||||||||| ||||   |||||||||    
T  10256519 aattgactaacgtttggcaatttcagggggttttt-gaagtttcctagaaatcaggggggtttttgacgaaagctacaatttcaagggttttttttgcct 10256617  T
Q  128 atttactc 135  Q
    ||||||||    
T  10256618 atttactc 10256625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 22539141 - 22539226
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggg 115  Q
    |||||||||||||||| |||||||| ||| ||||||||| |||  ||||| ||| ||||||| |||||||||| |||||||||||||    
T  22539141 aattgactaacgtttgacaatttcatggggttttttgaagttttttaaaagtca-gggggttcttgacgaaagttacaatttcaggg 22539226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 39618079 - 39618027
Alignment:
Q  84 gggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactct 136  Q
    |||| |||||||||||||||||||||||||||||||  ||| |||||||||||    
T  39618079 ggggttttttgacgaaagctacaatttcaggggggtaattgactatttactct 39618027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 39619328 - 39619388
Alignment:
Q  75 aaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||  ||| ||||||||||    
T  39619328 aaaattcaggggggtttttgacgaaagctacaatttcaggagggtaattgactatttactc 39619388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 45114922 - 45115006
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcag 113  Q
    |||| ||||||||||| |||||||| | |   ||||||| |||| ||||| ||| |||||||||||||||||| |||||||||||    
T  45114922 aattaactaacgtttgacaatttcatgaggggttttgaagtttcttaaaagtcaagggggtttttgacgaaagttacaatttcag 45115006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 28780170 - 28780081
Alignment:
Q  46 caatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    ||||||||||||  | |||||| ||| || ||  ||| ||||||  |||||||||  |||||||||||||||||  ||||||||||||||    
T  28780170 caatttcaggggggtatttgaagttttcttaatttcaggggggtaattgacgaaacttacaatttcaggggggtagttgcctatttactc 28780081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 47445094 - 47444988
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||| |||||||| |||  |||||||| |||||| ||||||| ||||| |||||||||||||||||||||||||||| |||||| |||    
T  47445094 aattgactaacgtttgacaatttcatgggggtttttgaagtttcctgaaaatcagggggggttttgacgaaagctacaatttcagggggttttttggcta 47444995  T
Q  129 tttactc 135  Q
    |||||||    
T  47444994 tttactc 47444988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 47445804 - 47445912
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatggggg-tttttgacgaaagctacaatttcag-gggggtttttgcc 126  Q
    ||||||||||||||||  ||||||||||| ||||||||| |||| ||||||||| ||||| ||||||| ||||  ||||||||||| |||||||||||||    
T  47445804 aattgactaacgtttgataatttcaggggtttttttgaagtttcttaaaaatcaggggggatttttgatgaaaattacaatttcagagggggtttttgcc 47445903  T
Q  127 tatttactc 135  Q
    |||| ||||    
T  47445904 tattcactc 47445912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 11343363 - 11343469
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  11343363 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 11343462  T
Q  129 tttactc 135  Q
    |||||||    
T  11343463 tttactc 11343469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 11501383 - 11501489
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  11501383 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 11501482  T
Q  129 tttactc 135  Q
    |||||||    
T  11501483 tttactc 11501489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 42813804 - 42813911
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||||||||||  |||||||| ||||   |||| ||| |||||||||||||||||| ||||||||||| |||||  ||| |||    
T  42813804 aattgacagacgcttgacaatttcagggttttttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcagaggggtaattgacta 42813903  T
Q  129 tttactct 136  Q
    ||||||||    
T  42813904 tttactct 42813911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 14282886 - 14282780
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||| |||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  14282886 aattgacagacgcttgacaatatcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 14282787  T
Q  129 tttactc 135  Q
    |||||||    
T  14282786 tttactc 14282780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 14284202 - 14284308
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||| | ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  14284202 aattgacagacgcttgacaatttcaggggggtttttaacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 14284301  T
Q  129 tttactc 135  Q
    |||||||    
T  14284302 tttactc 14284308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 36476000 - 36476106
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||  |||||||| |||  |||||||| |||| ||||| | |    || |||||||||||| |||||||||||| |||||||||||||    
T  36476000 aattgactaacgtttaacaatttcatgggggtttttgaagtttcttaaaagttagatagggttttgacgaaagttacaatttcaggagggtttttgccta 36476099  T
Q  129 tttactc 135  Q
    || ||||    
T  36476100 ttcactc 36476106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 36475379 - 36475295
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgg-gggtttttgacgaaagctacaatttca 112  Q
    |||||||||||||||  |||||||||||  | ||||||| |||| ||||||||||||  | ||||||||||||| ||||||||||    
T  36475379 aattgactaacgtttaacaatttcagggtttcttttgaagtttcttaaaaatcatggaagttttttgacgaaagttacaatttca 36475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 27585391 - 27585312
Alignment:
Q  33 gactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatggggg-tttttgacgaaagctacaatttcagg 114  Q
    |||||||||||| |||||||||||| ||||| ||| |||| |||||||  |||||| ||||||||||||| ||||||||||||    
T  27585391 gactaacgtttgacaatttcagggggttttt-gaagtttcttaaaaat--tgggggatttttgacgaaaggtacaatttcagg 27585312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 42813335 - 42813248
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcagggg 116  Q
    |||||||  ||| ||| ||||||||||||| ||||||| ||||   |||| ||| |||||||||||| ||||| ||||||||||||||    
T  42813335 aattgaccgacgcttggcaatttcaggggagtttttgacatttggcaaaattcaggggggtttttgatgaaagttacaatttcagggg 42813248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 45576034 - 45575964
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaa 100  Q
    |||||||||||||||| |||||| | |||| |||| ||| |||  |||||||||||||||||||||||||||    
T  45576034 aattgactaacgtttgacaattttatgggagtttt-gaagttttttaaaaatcatgggggtttttgacgaaa 45575964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 11342075 - 11341969
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||| ||||||||||||| ||||||||||| |||||  ||| |||    
T  11342075 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcagggggatttttgacgaaagttacaatttcagaggggtaattgacta 11341976  T
Q  129 tttactc 135  Q
    |||||||    
T  11341975 tttactc 11341969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 11500094 - 11499988
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||| ||||||||||||| ||||||||||| |||||  ||| |||    
T  11500094 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcagggggatttttgacgaaagttacaatttcagaggggtaattgacta 11499995  T
Q  129 tttactc 135  Q
    |||||||    
T  11499994 tttactc 11499988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 4564160 - 4564248
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggg 117  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||| ||||    
T  4564160 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaagggg 4564248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 786842 - 786735
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggg-gtttttgacgaaagctacaatttcaggggggtttttgcct 127  Q
    ||||||||||||||||  ||||| | ||| ||||||||| |||| ||||||||| ||||  ||||| | ||||  ||| |||||| || ||||||||||     
T  786842 aattgactaacgtttgataattttatggggttttttgaagtttcttaaaaatcagggggatttttttatgaaacttacgatttcaaggaggtttttgcca 786743  T
Q  128 atttactc 135  Q
    ||||||||    
T  786742 atttactc 786735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 38482521 - 38482563
Alignment:
Q  75 aaaaatcatgggggtttttgacgaaagctacaatttcaggggg 117  Q
    |||| ||| |||||||||||||||||| |||||||||||||||    
T  38482521 aaaattcaggggggtttttgacgaaagttacaatttcaggggg 38482563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 41729864 - 41729970
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| | | |||||||||||||||||  |||||||||||||| ||  ||| |||    
T  41729864 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaatttaggggggtttttgacgaaaattacaatttcaggggtgtaattgacta 41729963  T
Q  129 tttactc 135  Q
    |||||||    
T  41729964 tttactc 41729970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 36068136 - 36068220
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcag 113  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  36068136 aattgactaacatttgacaatttcagggggttttttgaaatttcctaaaaatcagggggttttttgacgaaagctacaatttcag 36068220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 36067383 - 36067291
Alignment:
Q  48 atttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactcttttg 140  Q
    |||||||||| |||||| ||||||| ||||||||| ||||| |||||||||||| |||||||||||| ||||||||||||||| |||| ||||    
T  36067383 atttcagggggttttttaaaatttcttaaaaatcaggggggattttgacgaaagttacaatttcaggagggtttttgcctattcactcatttg 36067291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 3987265 - 3987371
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||| |||||||| ||  |||||| || |||| ||||||||| | || ||||||||||||| ||||||||||||||| ||||||||||    
T  3987265 aattgactaacgtttgacaatttcaaggtttttttttaagtttcttaaaaatcaggaggatttttgacgaaagttacaatttcagggggctttttgccta 3987364  T
Q  129 tttactc 135  Q
    || ||||    
T  3987365 ttcactc 3987371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 30480725 - 30480808
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttca 112  Q
    |||||||||||||||| |||||||| ||||||||||||| | || ||||||||| |||  ||||| ||||||| ||||||||||    
T  30480725 aattgactaacgtttgacaatttcaagggattttttgaagtatcttaaaaatcaagggaattttttacgaaagttacaatttca 30480808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 6733122 - 6733017
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||  |||||||| |||| |||||||| |||  ||||| ||| |||||||||||||||||| || ||||| | || ||||||||||||    
T  6733122 aattgactaacgtttaacaatttcatgggagtttttgaagttttttaaaagtca-gggggtttttgacgaaagttataattttatggaggtttttgccta 6733024  T
Q  129 tttactc 135  Q
    || ||||    
T  6733023 ttcactc 6733017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 32390920 - 32391024
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||| ||||  ||| ||||||||| |||||| ||||||||||| |||   ||||||||||    
T  32390920 aattgactaacgtttgataatttcaggggattttt-gaagtttcttaaatgtcaggggggtttt-gacgaatgctacaatttcggggttttttttgccta 32391017  T
Q  129 tttactc 135  Q
    |||||||    
T  32391018 tttactc 32391024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 31286874 - 31286982
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||| |||||||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||||||||  ||| |||    
T  31286874 aattgacagacgcttgacaatatcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggggggtaattgacta 31286973  T
Q  129 tttactctt 137  Q
    |||||||||    
T  31286974 tttactctt 31286982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 34894299 - 34894195
Alignment:
Q  31 ttgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatt 130  Q
    |||||| ||||||| |||||||||||| ||||||||| |||   |||| ||| | |  |||||||||||||||||||||||| ||||||  ||| |||||    
T  34894299 ttgactgacgtttgacaatttcaggggtttttttgaagttttgcaaaattcaggagaatttttgacgaaagctacaatttcaagggggtaattgactatt 34894200  T
Q  131 tactc 135  Q
    |||||    
T  34894199 tactc 34894195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 31285576 - 31285487
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcagggggg 118  Q
    |||||||  ||| ||| ||||||||||||  ||||||| ||||   |||| ||| |||||||||||||||||| ||||||||||||||||    
T  31285576 aattgacagacgcttgacaatttcaggggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcagggggg 31285487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 24240672 - 24240589
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttca 112  Q
    ||||||||||| |||  |||||||||||| |||||||||  ||   |||||||| ||||||||||||| |||| ||||||||||    
T  24240672 aattgactaacatttaacaatttcaggggtttttttgaagctttgcaaaaatcaagggggtttttgacaaaagttacaatttca 24240589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 35393269 - 35393162
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||  ||| ||| |||||||||||| |||||||| ||||   |||| ||| |||  ||||||||||||| |||||||||||| ||||  ||| |||    
T  35393269 aattgacagacgcttgacaatttcagggggttttttgacattttgcaaaattcaggggaatttttgacgaaagttacaatttcaggagggtaattgacta 35393170  T
Q  129 tttactct 136  Q
    ||||||||    
T  35393169 tttactct 35393162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 35394737 - 35394826
Alignment:
Q  46 caatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcctatttactc 135  Q
    |||||||| |||  ||||||| ||||   |||| ||| |||||||||||||||||| |||||||||||| ||||  ||| ||||||||||    
T  35394737 caatttcatgggggtttttgacattttgcaaaattcaggggggtttttgacgaaagttacaatttcaggagggtaattgactatttactc 35394826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 6733167 - 6733277
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    ||||| |||||||||| ||||||||  |  |||||| || |||| ||||||||| ||   ||||||||||||| ||||||||||| | | ||||||||||    
T  6733167 aattggctaacgtttgacaatttcaaagtttttttt-aagtttcttaaaaatcagggttttttttgacgaaagttacaatttcagagagatttttgccta 6733265  T
Q  129 tttactcttttg 140  Q
    || |||| ||||    
T  6733266 ttcactcatttg 6733277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 33173 - 33280
Alignment:
Q  29 aattgactaacgtttgtcaatttcaggggattttttgaaa-tttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgcct 127  Q
    |||||||||||||||| ||||||||||||  |||||| || |||||||||||||| ||| |||||| |||||||||||||||||| ||   |||||||||    
T  33173 aattgactaacgtttgacaatttcaggggggtttttggaagtttcctaaaaatcaggggagttttttacgaaagctacaatttcaaggttttttttgcct 33272  T
Q  128 atttactc 135  Q
    ||||||||    
T  33273 atttactc 33280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 32457 - 32351
Alignment:
Q  30 attgactaacgtttgtcaatttcag-gggattttttgaaatttcctaaaaatcatgggggtttttgacgaaagctacaatttcaggggggtttttgccta 128  Q
    |||||||||||||||  |||||| | |||  |||||||| |||| |||||||||  ||| ||||||||||||| |||||||||||| |||||||||||||    
T  32457 attgactaacgtttgataatttccgagggggtttttgaagtttcttaaaaatcagagggatttttgacgaaagttacaatttcaggagggtttttgccta 32358  T
Q  129 tttactc 135  Q
    || ||||    
T  32357 ttcactc 32351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 35100 - 35132
Alignment:
Q  103 tacaatttcaggggggtttttgcctatttactc 135  Q
    ||||||||||||||||| |||||||||||||||    
T  35100 tacaatttcaggggggtatttgcctatttactc 35132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 43458 - 43502
Alignment:
Q  92 ttgacgaaagctacaatttcaggggggtttttgcctatttactct 136  Q
    |||||||||  |||||||||||||||||  |||||||||||||||    
T  43458 ttgacgaaacttacaatttcaggggggtaattgcctatttactct 43502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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