View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0227_high_13 (Length: 251)

Name: NF0227_high_13
Description: NF0227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0227_high_13
NF0227_high_13
[»] chr1 (33 HSPs)
chr1 (1-125)||(5979710-5979834)
chr1 (126-251)||(27564653-27564777)
chr1 (126-251)||(41758863-41758987)
chr1 (130-251)||(50630516-50630636)
chr1 (126-251)||(9474794-9474918)
chr1 (126-251)||(48716200-48716324)
chr1 (126-251)||(2581973-2582097)
chr1 (130-251)||(32813305-32813425)
chr1 (142-251)||(38632255-38632363)
chr1 (126-251)||(8346305-8346430)
chr1 (126-251)||(43190-43314)
chr1 (126-251)||(47452238-47452362)
chr1 (127-251)||(37649256-37649379)
chr1 (125-251)||(3000377-3000502)
chr1 (126-251)||(38595212-38595336)
chr1 (130-251)||(51898605-51898725)
chr1 (176-251)||(44548343-44548418)
chr1 (146-251)||(45044498-45044602)
chr1 (130-251)||(49811449-49811569)
chr1 (142-251)||(11152312-11152420)
chr1 (142-251)||(37926372-37926480)
chr1 (126-251)||(26274490-26274611)
chr1 (130-251)||(44454037-44454161)
chr1 (175-251)||(13414819-13414895)
chr1 (156-251)||(5958948-5959042)
chr1 (156-233)||(50590948-50591024)
chr1 (130-239)||(6260940-6261048)
chr1 (183-251)||(48489358-48489426)
chr1 (130-233)||(41608415-41608517)
chr1 (148-251)||(23597031-23597133)
chr1 (130-233)||(47748518-47748620)
chr1 (156-233)||(44332319-44332395)
chr1 (199-251)||(26440792-26440844)
[»] chr8 (31 HSPs)
chr8 (126-251)||(12831105-12831229)
chr8 (126-251)||(504039-504163)
chr8 (125-251)||(23122514-23122639)
chr8 (126-251)||(14547980-14548104)
chr8 (126-248)||(34012214-34012335)
chr8 (124-251)||(15197391-15197517)
chr8 (130-251)||(40423865-40423985)
chr8 (126-251)||(44507006-44507129)
chr8 (130-251)||(8841354-8841474)
chr8 (126-251)||(9122243-9122367)
chr8 (130-251)||(5957888-5958008)
chr8 (126-251)||(1179858-1179982)
chr8 (130-248)||(10284553-10284670)
chr8 (130-251)||(37038537-37038657)
chr8 (130-251)||(43414503-43414623)
chr8 (142-251)||(15048115-15048224)
chr8 (126-212)||(42710212-42710297)
chr8 (130-233)||(4854785-4854887)
chr8 (130-251)||(42354510-42354630)
chr8 (181-251)||(10621059-10621129)
chr8 (129-233)||(24307714-24307817)
chr8 (130-233)||(16056323-16056425)
chr8 (183-251)||(15258903-15258971)
chr8 (130-233)||(32707925-32708029)
chr8 (129-233)||(30479395-30479498)
chr8 (130-230)||(34307295-34307394)
chr8 (183-237)||(20074916-20074970)
chr8 (156-246)||(25838252-25838341)
chr8 (164-233)||(16383453-16383521)
chr8 (156-251)||(42221573-42221667)
chr8 (183-237)||(40467772-40467826)
[»] chr6 (20 HSPs)
chr6 (126-250)||(22880576-22880699)
chr6 (126-251)||(11427676-11427800)
chr6 (126-251)||(32869736-32869860)
chr6 (126-251)||(17598612-17598736)
chr6 (126-251)||(29857885-29858009)
chr6 (130-251)||(31976306-31976426)
chr6 (126-251)||(23128044-23128169)
chr6 (126-251)||(6209384-6209507)
chr6 (159-251)||(31109351-31109442)
chr6 (129-248)||(15832638-15832756)
chr6 (130-251)||(31110683-31110803)
chr6 (146-251)||(28536426-28536528)
chr6 (127-251)||(946434-946557)
chr6 (130-251)||(4231606-4231726)
chr6 (130-251)||(31952952-31953072)
chr6 (130-233)||(15989964-15990066)
chr6 (130-233)||(30341282-30341384)
chr6 (142-239)||(30870084-30870180)
chr6 (130-233)||(15507946-15508048)
chr6 (130-172)||(22422001-22422043)
[»] chr4 (31 HSPs)
chr4 (126-251)||(41236405-41236529)
chr4 (126-251)||(48182967-48183091)
chr4 (126-251)||(6034102-6034226)
chr4 (126-251)||(42044285-42044409)
chr4 (126-248)||(24995025-24995146)
chr4 (130-251)||(41823940-41824060)
chr4 (126-251)||(11511381-11511504)
chr4 (128-251)||(54473453-54473575)
chr4 (156-251)||(480395-480489)
chr4 (126-251)||(29234173-29234287)
chr4 (130-251)||(29239944-29240064)
chr4 (130-251)||(50052350-50052470)
chr4 (126-251)||(23608293-23608417)
chr4 (130-251)||(31910250-31910370)
chr4 (126-251)||(53352492-53352608)
chr4 (142-233)||(40574855-40574945)
chr4 (130-251)||(50526093-50526213)
chr4 (130-233)||(19670638-19670740)
chr4 (177-251)||(48647694-48647768)
chr4 (177-251)||(3481712-3481786)
chr4 (156-233)||(17983691-17983767)
chr4 (176-251)||(28480235-28480310)
chr4 (176-251)||(28481110-28481185)
chr4 (176-251)||(28481985-28482060)
chr4 (148-251)||(29977943-29978045)
chr4 (130-233)||(55475267-55475369)
chr4 (156-233)||(47986284-47986360)
chr4 (130-251)||(50813814-50813934)
chr4 (130-233)||(29547881-29547983)
chr4 (130-227)||(18924417-18924513)
chr4 (148-225)||(56300105-56300181)
[»] chr2 (37 HSPs)
chr2 (126-251)||(10249300-10249424)
chr2 (126-251)||(13438401-13438525)
chr2 (116-251)||(28863513-28863647)
chr2 (126-251)||(17473078-17473202)
chr2 (126-251)||(32505566-32505690)
chr2 (126-251)||(19930738-19930862)
chr2 (125-251)||(9058538-9058663)
chr2 (126-251)||(7465653-7465777)
chr2 (128-251)||(33436020-33436142)
chr2 (130-251)||(20700873-20700993)
chr2 (126-251)||(40701536-40701660)
chr2 (125-251)||(30915521-30915646)
chr2 (126-251)||(28381573-28381697)
chr2 (126-251)||(38882729-38882856)
chr2 (126-251)||(4060743-4060867)
chr2 (135-251)||(38273070-38273184)
chr2 (130-248)||(36168897-36169014)
chr2 (138-251)||(2533181-2533293)
chr2 (130-251)||(40613824-40613944)
chr2 (135-251)||(42257251-42257366)
chr2 (126-251)||(5574418-5574530)
chr2 (130-224)||(44152012-44152105)
chr2 (130-233)||(13365429-13365531)
chr2 (130-212)||(41758684-41758765)
chr2 (156-233)||(2997435-2997511)
chr2 (126-251)||(27864762-27864873)
chr2 (176-251)||(17819971-17820046)
chr2 (130-233)||(43490197-43490299)
chr2 (130-236)||(3440052-3440157)
chr2 (181-251)||(26891476-26891546)
chr2 (130-251)||(3738001-3738121)
chr2 (130-251)||(38732412-38732532)
chr2 (130-233)||(17823864-17823966)
chr2 (42-88)||(44728659-44728705)
chr2 (130-251)||(3034905-3035025)
chr2 (176-248)||(41575198-41575271)
chr2 (156-233)||(45097683-45097759)
[»] chr7 (34 HSPs)
chr7 (126-251)||(8080301-8080425)
chr7 (126-251)||(19329900-19330024)
chr7 (126-251)||(4999432-4999556)
chr7 (126-251)||(32951411-32951535)
chr7 (126-251)||(38837275-38837399)
chr7 (126-251)||(35137591-35137715)
chr7 (126-251)||(40957765-40957889)
chr7 (135-251)||(19436114-19436229)
chr7 (126-251)||(38267098-38267222)
chr7 (126-251)||(7389447-7389570)
chr7 (148-251)||(3784053-3784155)
chr7 (126-249)||(11044238-11044360)
chr7 (130-251)||(35522934-35523054)
chr7 (130-251)||(46033723-46033843)
chr7 (156-251)||(3694425-3694519)
chr7 (148-246)||(31735940-31736037)
chr7 (126-249)||(3434622-3434734)
chr7 (130-251)||(16374746-16374866)
chr7 (126-251)||(36362084-36362196)
chr7 (130-248)||(21234462-21234579)
chr7 (130-251)||(41423740-41423860)
chr7 (126-251)||(36361843-36361955)
chr7 (156-251)||(8238271-8238365)
chr7 (142-233)||(26296720-26296810)
chr7 (176-249)||(36208233-36208306)
chr7 (130-251)||(38044255-38044375)
chr7 (130-234)||(35468777-35468880)
chr7 (130-233)||(22343437-22343539)
chr7 (130-233)||(41915817-41915919)
chr7 (148-237)||(18207251-18207339)
chr7 (142-251)||(27744243-27744351)
chr7 (130-189)||(46374746-46374804)
chr7 (130-251)||(7727964-7728084)
chr7 (156-233)||(32564374-32564450)
[»] chr3 (35 HSPs)
chr3 (126-251)||(33644258-33644382)
chr3 (126-251)||(53982069-53982193)
chr3 (126-251)||(31456747-31456871)
chr3 (126-251)||(17470463-17470587)
chr3 (119-251)||(49607472-49607603)
chr3 (130-251)||(8076451-8076571)
chr3 (126-251)||(52629358-52629482)
chr3 (126-251)||(54868813-54868937)
chr3 (130-251)||(20764837-20764957)
chr3 (128-251)||(9563057-9563179)
chr3 (130-251)||(11347844-11347964)
chr3 (130-251)||(51419282-51419402)
chr3 (127-251)||(36707347-36707466)
chr3 (130-251)||(26141452-26141574)
chr3 (130-248)||(30801655-30801772)
chr3 (130-248)||(41189686-41189803)
chr3 (130-248)||(35536687-35536804)
chr3 (126-251)||(48587019-48587133)
chr3 (130-251)||(47531923-47532043)
chr3 (130-237)||(35965704-35965810)
chr3 (126-198)||(11095285-11095356)
chr3 (127-251)||(27714822-27714933)
chr3 (142-248)||(33118784-33118890)
chr3 (130-233)||(36331251-36331353)
chr3 (130-251)||(14623761-14623881)
chr3 (183-251)||(26754753-26754821)
chr3 (142-251)||(13897989-13898097)
chr3 (183-239)||(48375680-48375736)
chr3 (192-251)||(11907429-11907488)
chr3 (130-233)||(45058475-45058577)
chr3 (155-236)||(1758404-1758483)
chr3 (130-224)||(8956847-8956940)
chr3 (183-251)||(24699928-24699996)
chr3 (158-248)||(39670072-39670161)
chr3 (130-212)||(43746436-43746517)
[»] chr5 (28 HSPs)
chr5 (126-248)||(33149556-33149677)
chr5 (126-251)||(18520802-18520926)
chr5 (126-251)||(40145465-40145589)
chr5 (126-251)||(2740332-2740456)
chr5 (124-251)||(14831872-14831998)
chr5 (125-251)||(13811710-13811834)
chr5 (126-251)||(35785257-35785381)
chr5 (142-251)||(36732876-36732984)
chr5 (130-251)||(15409532-15409652)
chr5 (130-251)||(31009046-31009166)
chr5 (130-251)||(6679756-6679876)
chr5 (146-251)||(26720574-26720678)
chr5 (146-251)||(26990323-26990427)
chr5 (130-251)||(35943814-35943934)
chr5 (130-241)||(36875538-36875644)
chr5 (173-251)||(28177833-28177911)
chr5 (182-251)||(42414275-42414344)
chr5 (126-251)||(31132402-31132516)
chr5 (142-224)||(33825258-33825339)
chr5 (148-237)||(2177436-2177524)
chr5 (130-233)||(2252090-2252192)
chr5 (130-233)||(3921187-3921289)
chr5 (148-251)||(39557457-39557559)
chr5 (148-237)||(20073456-20073544)
chr5 (126-172)||(16115250-16115296)
chr5 (130-251)||(21370062-21370182)
chr5 (218-251)||(41470425-41470458)
chr5 (142-251)||(9603871-9603979)
[»] scaffold0237 (1 HSPs)
scaffold0237 (126-251)||(4087-4211)
[»] scaffold0321 (1 HSPs)
scaffold0321 (126-251)||(10027-10151)
[»] scaffold1268 (1 HSPs)
scaffold1268 (130-249)||(851-969)
[»] scaffold1267 (1 HSPs)
scaffold1267 (130-249)||(851-969)
[»] scaffold0110 (1 HSPs)
scaffold0110 (130-248)||(8785-8902)
[»] scaffold0018 (1 HSPs)
scaffold0018 (130-251)||(152556-152676)
[»] scaffold0316 (1 HSPs)
scaffold0316 (195-251)||(17112-17168)


Alignment Details
Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 5979834 - 5979710
Alignment:
Q  1 tcatcaacacatcacatcccaacatatttgtacactcttgattttcatacactcattctacaccatattttctctctatctatctcttaaggtagagttt 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5979834 tcatcaacacatcacatcctaacatatttgtacacccttgattttcatacactcattctacaccatattttctctctatctatctcttaaggtagagttt 5979735  T
Q  101 tgccgctcctatggtatattttgac 125  Q
    |||||||||||||||||||||||||    
T  5979734 tgccgctcctatggtatattttgac 5979710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 27564653 - 27564777
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  27564653 gagtaatgatacatagacaccctttattcccatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 27564751  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||| ||||||||||||    
T  27564752 ggggtccacgtgattacgtgtcagat 27564777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 41758987 - 41758863
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  41758987 gagtaatgatacatagacaccctttattctcatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgc 41758889  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    |||||||| |||||||||||||||||    
T  41758888 ggggtccatgtgactacgtgtcagat 41758863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 50630636 - 50630516
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  50630636 aatgatgcatagacaccatttattctcatacacccttgtacaccct-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 50630538  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||    
T  50630537 tccacgtgactacgtgtcagat 50630516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 9474794 - 9474918
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  9474794 gagtaatgatacatagacactctttattctcatacacccttgtacatccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgc 9474892  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  9474893 ggggtccacgtgactacgtgtcagat 9474918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 48716200 - 48716324
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||| |||||||| || ||||||||||||    
T  48716200 gagtaatgatacatagacaccctttattcccatacacccttgtacacccc-atgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgc 48716298  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  48716299 ggggtccacgtgactacgtgtcagat 48716324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 2582097 - 2581973
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||| | ||| ||||||||| ||||||||||||||||| |||| ||||||||||||    
T  2582097 gagtaatgatacataaacaccctttattctaatacacccttgtacacctc-atgtattaggaagagagaagaggagagaaaaaagaaagtgtgcttgtgc 2581999  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  2581998 ggggtccacgtgactacgtgtcagat 2581973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 32813425 - 32813305
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  32813425 aatgttacatagacaccatttattcccatacacccttgtacacccc-atacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 32813327  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| ||||| |||||||||||    
T  32813326 tccatgtgaccacgtgtcagat 32813305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 38632255 - 38632363
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgacta 241  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  38632255 acaccctttattcccatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgacta 38632353  T
Q  242 cgtgtcagat 251  Q
    ||||||||||    
T  38632354 cgtgtcagat 38632363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 8346305 - 8346430
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaa-gaggagagaaaagagaatgtgtgcttgtg 224  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||| || ||||||||||||| || || ||||||||||||||||| |||||||||||    
T  8346305 gagtaatgatacataaataccatttattctcatacacctttgtacactcc-atgcattaggaagagaaaaagaggagagaaaagagaaagtgtgcttgtg 8346403  T
Q  225 cggggtccacgtgactacgtgtcagat 251  Q
    | |||||||||||||||||||||||||    
T  8346404 cagggtccacgtgactacgtgtcagat 8346430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 43314 - 43190
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| | ||| |||||||| |||||| |||||||||||| ||||||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  43314 gagtaatgatacatagataccctttattcttatacactcttgtacacccc-atgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgc 43216  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    || |||||||||||||||||||||||    
T  43215 ggagtccacgtgactacgtgtcagat 43190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 47452238 - 47452362
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||  ||||||| |||||| ||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  47452238 gagtaatgatacatagacactctttattcccatacatccttgtacacccc-atgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 47452336  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||||||||||||| ||||    
T  47452337 gggatccacgtgactacgtgttagat 47452362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 37649379 - 37649256
Alignment:
Q  127 agtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcg 226  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  37649379 agtaatgatacatagacaccctttattcccatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcg 37649281  T
Q  227 gggtccacgtgactacgtgtcagat 251  Q
    |  | |||||||| |||||||||||    
T  37649280 gaattcacgtgaccacgtgtcagat 37649256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 3000502 - 3000377
Alignment:
Q  125 cgagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg 224  Q
    |||||||||||||||| ||| |  |||||  |||||||||||||||||||| ||  ||||||||| ||||||| |||||||||||||| ||||||||||     
T  3000502 cgagtaatgatacatagacatccattatttccatacacccttgtacacccc-atatattaggaagagagaagatgagagaaaagagaaagtgtgcttgta 3000404  T
Q  225 cggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||||||||||||||||    
T  3000403 cggggtccacgtgactacgtgtcagat 3000377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 38595336 - 38595212
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||| |  |||||  |||||||||||||||||||| ||  ||||||||| ||||||| |||||||||||||| |||||||||| |    
T  38595336 gagtaatgatacatagacatccattatttccatacacccttgtacacccc-atatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtac 38595238  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  38595237 ggggtccacgtgactacgtgtcagat 38595212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 51898605 - 51898725
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||   ||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| |||| |||||||||||||||     
T  51898605 aatgttacataaacaccctttatttctatacacccttgtacacccc-atgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcggga 51898703  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||    
T  51898704 tccacgtgactacgtgtcagat 51898725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 44548343 - 44548418
Alignment:
Q  176 catgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44548343 catgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagat 44548418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 45044498 - 45044602
Alignment:
Q  146 catttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtg 245  Q
    |||||||||||||||||||||||||||||| || |||||||||| |||||||| |||||||||||||  |||| |||||||||||||| ||| |||| ||    
T  45044498 catttattctcatacacccttgtacacccc-atacattaggaagagagaagagaagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatg 45044596  T
Q  246 tcagat 251  Q
    ||||||    
T  45044597 tcagat 45044602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 49811449 - 49811569
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||||||||||||||||| |||| | || |||||||||| |||||||||||||||||||||| |||||||||||||| |    
T  49811449 aatgttacatagacaccctttattctcatacacccttgtgcaccac-atacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggag 49811547  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    || |  || |||||||||||||    
T  49811548 tctatatggctacgtgtcagat 49811569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 11152312 - 11152420
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgacta 241  Q
    |||||||||||||||||||| |||| |||||||| ||||| | ||||| ||||||||||||| ||| |||| | |||||||||||||||| || ||||||    
T  11152312 acaccatttattctcatacatccttctacacccc-atgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgacta 11152410  T
Q  242 cgtgtcagat 251  Q
    ||||||||||    
T  11152411 cgtgtcagat 11152420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 37926372 - 37926480
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgacta 241  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| |||||||| ||||||||||||| |||| ||||| |||| |||| ||| | |    
T  37926372 acaccatttattcacatacatccttgtacacccc-atacattaggaagagagaagagaagagaaaagagaaagtgtacttgtacgggatccatgtggcca 37926470  T
Q  242 cgtgtcagat 251  Q
    ||||||||||    
T  37926471 cgtgtcagat 37926480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 26274611 - 26274490
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||| ||  | |||||||||||||| |||||   ||||||||||| || |||| |||||||    
T  26274611 gagtaatgatacatagacaccctttattcccatacacccttgtgca-tctcatgcattaggaagagagaa---gagagaaaagaaaaagtgtacttgtgc 26274516  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
     || |||||||||||| |||||||||    
T  26274515 aggatccacgtgactatgtgtcagat 26274490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 44454161 - 44454037
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacac---ccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcg 226  Q
    |||| |||||| |||||||||||||| |||||||||| ||| |   ||||||||||||||||| ||||||| ||||| ||||| || ||||||||||| |    
T  44454161 aatgttacataaacaccatttattcttatacacccttatactctgaccccatgcattaggaagagagaagatgagaggaaagaaaaagtgtgcttgtgtg 44454062  T
Q  227 gggtccacgtgactacgtgtcagat 251  Q
    || ||||||| || || ||||||||    
T  44454061 ggatccacgtaaccacatgtcagat 44454037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 13414895 - 13414819
Alignment:
Q  175 ccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||| ||||||| || |||||||||||  |||||||||| ||||||||||||||||||||| ||||    
T  13414895 ccatgcattaggaagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagat 13414819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 5958948 - 5959042
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||||||  |||| || ||||||||    
T  5958948 catacacccttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagat 5959042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 50590948 - 50591024
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||||||    
T  50590948 catacacccttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtcca 50591024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 6261048 - 6260940
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| |||||||||||| ||||||||| ||||||||||  ||  | ||| ||| ||||||||||||  ||| ||||  ||||||| |||||||    
T  6261048 aatgttacatacacaccatttattttcatacacctttgtacaccct-atatactagaaagagagaagaggagaagaaatagaaaatgtgcttatgcgggg 6260950  T
Q  230 tccacgtgac 239  Q
    ||||||||||    
T  6260949 tccacgtgac 6260940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 48489426 - 48489358
Alignment:
Q  183 taggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||| ||||||||| ||||||| ||||  |||||||||||||| |||||||||| || ||||||||    
T  48489426 taggaagagagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagat 48489358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 41608415 - 41608517
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||| ||| ||| ||||||||| |||||||| |||  |||||||| |||| ||||| |||||    
T  41608415 aatgttacataaacaccttttaattgcatacacccttgtaca-ccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacgggg 41608513  T
Q  230 tcca 233  Q
    ||||    
T  41608514 tcca 41608517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 23597031 - 23597133
Alignment:
Q  148 tttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtc 247  Q
    |||||||||||||| ||||| ||||| | ||| | ||||||  ||||| ||||||||||||| || ||||| ||||||  |||| ||||| | |||||||    
T  23597031 tttattctcatacatccttggacacctc-atgaactaggaatagagaataggagagaaaagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtc 23597129  T
Q  248 agat 251  Q
    ||||    
T  23597130 agat 23597133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 47748620 - 47748518
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  ||||||| |||||||| ||||||| ||||||||| |||||||| |||  |||||||| || | ||||||||||     
T  47748620 aatgttacatagacaccttttaattgcatacactcttgtaca-ccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcggga 47748522  T
Q  230 tcca 233  Q
    ||||    
T  47748521 tcca 47748518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 44332319 - 44332395
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    ||||||||||||||||| |  ||| ||||||||| |||||||| |||  |||||||| || | |||||||||||||||    
T  44332319 catacacccttgtacactct-atgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcggggtcca 44332395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 26440844 - 26440792
Alignment:
Q  199 gagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||| |||||||| |||||| |||| ||| | |||||||||||    
T  26440844 gagagaaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagat 26440792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 12831229 - 12831105
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  12831229 gagtaatgatacatagacaccatttattctcatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 12831131  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  12831130 ggggtccacgtgactacgtgtcagat 12831105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 504039 - 504163
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  504039 gagtaatgatacatagacaccctttattctcatacacccttgtacacccc-atgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgc 504137  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  504138 ggggtccacgtgactacgtgtcagat 504163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 125 - 251
Target Start/End: Original strand, 23122514 - 23122639
Alignment:
Q  125 cgagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg 224  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||| ||    
T  23122514 cgagtaatgatacatagacaccctttattctcatacacccttgtacacccc-atgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatg 23122612  T
Q  225 cggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||||||||||||||||    
T  23122613 cggggtccacgtgactacgtgtcagat 23122639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 14548104 - 14547980
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  14548104 gagtaatgatacatagacaccctttattcccatacatccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 14548006  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  14548005 ggggtccacgtgactacgtgtcagat 14547980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 126 - 248
Target Start/End: Original strand, 34012214 - 34012335
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  34012214 gagtaatgatacatagacaccctttattctcgtacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 34012312  T
Q  226 ggggtccacgtgactacgtgtca 248  Q
    ||| |||||||||||||||||||    
T  34012313 gggatccacgtgactacgtgtca 34012335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 124 - 251
Target Start/End: Complemental strand, 15197517 - 15197391
Alignment:
Q  124 acgagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgt 223  Q
    ||||||||||||||||| ||||  ||||||| |||||||||||||||||| | ||||||| ||||| || ||||||||||||||||||| ||||||||||    
T  15197517 acgagtaatgatacatagacactttttattcccatacacccttgtacacctc-atgcatttggaagagaaaagaggagagaaaagagaaagtgtgcttgt 15197419  T
Q  224 gcggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||||    
T  15197418 gcggggtccacgtgactacgtgtcagat 15197391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 40423865 - 40423985
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||| | ||| ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  40423865 aatgatacatagacaccttttattcccatacacccttgtacacctc-atgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 40423963  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||| ||||||||||||||||    
T  40423964 tccacatgactacgtgtcagat 40423985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 44507006 - 44507129
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| || ||||||| |    
T  44507006 gagtaatgatacatagacat-atttattctcatacacccttgtacacccc-atgcattaggaagagagaagatgagagaaaagagaaagtatgcttgtac 44507103  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  44507104 ggggtccacgtgactacgtgtcagat 44507129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 8841354 - 8841474
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||  ||||||||||||| |||||||| ||||||||||||||||    
T  8841354 aatgttacatagacaccatttattctcatacactcttgtacacccc-atgcactaggaaaagagaagaggagaggaaagagaaagtgtgcttgtgcgggg 8841452  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||| ||||    
T  8841453 tccacgtgactacgtgttagat 8841474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 9122367 - 9122243
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| |||   ||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  9122367 gagtaatgatacatagacattctttattcccatacactcttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 9122269  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||||||||| ||||||||    
T  9122268 gggatccacgtgactacatgtcagat 9122243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 5958008 - 5957888
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |||||||| ||||| |||||||||     
T  5958008 aatgttacataaacaccctttattctcatacacccttgtacacctc-atgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcggga 5957910  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||    
T  5957909 tccacgtgactacgtgtcagat 5957888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 1179858 - 1179982
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||| ||| ||| | ||||||| |||| | ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  1179858 gagtaatgatagatagacatcctttattcccatatatccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 1179956  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||  ||||| ||||||||||||||||    
T  1179957 ggaatccacatgactacgtgtcagat 1179982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 10284553 - 10284670
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||||| ||||| ||||||||||||| ||||| ||||||| ||||||| || || |||||||| ||||||||||||||||    
T  10284553 aatgttacatagacaccttttattcttatacaaccttgtacacccc-atgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgtgcgggg 10284651  T
Q  230 tccacgtgactacgtgtca 248  Q
    |||||||||||||||||||    
T  10284652 tccacgtgactacgtgtca 10284670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 37038657 - 37038537
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||   ||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| |||| |||||||||||||||     
T  37038657 aatgttacataaacaccctttatttctatacacccttgtacacccc-atgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcggga 37038559  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||    
T  37038558 tccacgtgactacgtgtcagat 37038537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 43414503 - 43414623
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||  |||||||||||||||||||| || |||||||||| |||||||||||||||||||||| |||||||||||||||     
T  43414503 aatgttacatagacaccctttattgccatacacccttgtacacccc-atacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggga 43414601  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| ||||| |||||| ||||    
T  43414602 tccatgtgaccacgtgttagat 43414623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 15048115 - 15048224
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaa-gagaatgtgtgcttgtgcggggtccacgtgact 240  Q
    ||||| |||||||  ||||||||||||||| ||| || |||||||||| |||||||||||| |||| ||||| |||||||||||||||||||| ||| ||    
T  15048115 acaccctttattccgatacacccttgtacatccc-atacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtgcggggtccatgtggct 15048213  T
Q  241 acgtgtcagat 251  Q
    |||||||||||    
T  15048214 acgtgtcagat 15048224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 42710212 - 42710297
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaa 212  Q
    ||||||||||||| | ||||| ||||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  42710212 gagtaatgatacacagacaccctttattcccatacacccttgtaca-ccccatacattaggaagagagaagaggagagaaaagagaa 42710297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 4854785 - 4854887
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||  |||||||||||| ||||||||||| ||| || |||||| ||| |||||||||||||||||||||| |||||||||||| |||    
T  4854785 aatgttacatagacactctttattctcatatacccttgtacatccc-atacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgcaggg 4854883  T
Q  230 tcca 233  Q
    ||||    
T  4854884 tcca 4854887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 42354510 - 42354630
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||||| |||  |||||||| |||||||| || | |     
T  42354510 aatgttacatagacaccatttattctcatacacccttctaca-ccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgcttatgtgaga 42354608  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||| |||  |||||||||||    
T  42354609 tccacatgaacacgtgtcagat 42354630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 10621059 - 10621129
Alignment:
Q  181 attaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| || | ||| |||||||||||||    
T  10621059 attaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagat 10621129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 24307714 - 24307817
Alignment:
Q  129 taatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggg 228  Q
    ||||| |||||| ||||| |||| |  |||||||||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| ||||||||||    
T  24307714 taatgttacatagacaccttttaattgcatacacccttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 24307812  T
Q  229 gtcca 233  Q
    |||||    
T  24307813 gtcca 24307817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 16056323 - 16056425
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  16056323 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  230 tcca 233  Q
    ||||    
T  16056422 tcca 16056425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 15258903 - 15258971
Alignment:
Q  183 taggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||| ||||||||||||| ||||||||  ||||||||||| ||||||||||||| || ||||||||    
T  15258903 taggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagat 15258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 32707925 - 32708029
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaa--tgtgtgcttgtgcgg 227  Q
    |||| |||||| ||||| |||| |  |||||||||||||||| ||||||| ||||||||| |||||||| |||  ||||||||  ||||| |||||||||    
T  32707925 aatgttacatagacaccttttaattgcatacacccttgtaca-ccccatgtattaggaagagagaagagaagaagaaagagaaagtgtgtacttgtgcgg 32708023  T
Q  228 ggtcca 233  Q
    ||||||    
T  32708024 ggtcca 32708029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 233
Target Start/End: Original strand, 30479395 - 30479498
Alignment:
Q  129 taatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggg 228  Q
    ||||| |||||| ||||| |||| |  |||||||||||||||| || |||| ||||||||| |||||||| |||  |||||||| |||| |||||||| |    
T  30479395 taatgttacatagacaccttttaattgcatacacccttgtaca-cctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgag 30479493  T
Q  229 gtcca 233  Q
    |||||    
T  30479494 gtcca 30479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 34307394 - 34307295
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||  ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 34307296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 20074916 - 20074970
Alignment:
Q  183 taggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtg 237  Q
    ||||||| |||||||| |||| |||||||| |||||||||||| |||||||||||    
T  20074916 taggaagagagaagagaagaggaaagagaaagtgtgcttgtgcagggtccacgtg 20074970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 25838341 - 25838252
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgt 246  Q
    |||||| ||||||||||||  || |||||| ||  ||||||||||||||||||| || |||||||||| ||| ||||| ||||| ||||||    
T  25838341 catacaaccttgtacaccct-atacattagcaaaagagaagaggagagaaaagaaaaagtgtgcttgtacggagtccatgtgacaacgtgt 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 16383521 - 16383453
Alignment:
Q  164 cttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    |||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||||||    
T  16383521 cttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtcca 16383453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 42221667 - 42221573
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||||||||  ||  ||| ||||| ||||||| ||||  |||||||| ||||||||||  ||||||||  ||| ||||||||||||    
T  42221667 catacacccttgtacaccct-atatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagat 42221573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 40467826 - 40467772
Alignment:
Q  183 taggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtg 237  Q
    ||||||| ||||||| ||||| |||||||| |||||||||||||  |||||||||    
T  40467826 taggaagagagaagatgagaggaaagagaaagtgtgcttgtgcgaagtccacgtg 40467772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 22880576 - 22880699
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  22880576 gagtaatgatacatatacaccatttattcccatacacccttgtacacccc-atgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 22880674  T
Q  226 ggggtccacgtgactacgtgtcaga 250  Q
    |||||||||||||||||||||||||    
T  22880675 ggggtccacgtgactacgtgtcaga 22880699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 11427800 - 11427676
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  11427800 gagtaatgatacatagacaccctttattctcatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 11427702  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||||||||||||||||||    
T  11427701 gggatccacgtgactacgtgtcagat 11427676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 32869860 - 32869736
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  32869860 gagtaatgatacatagacaccctttattcccatacatccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 32869762  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  32869761 ggggtccacgtgactacgtgtcagat 32869736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 17598736 - 17598612
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  17598736 gagtaatgatacatagacaccttttatttccatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 17598638  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||| |||||||||||    
T  17598637 ggggtccacgtgacaacgtgtcagat 17598612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 29858009 - 29857885
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||| |||    
T  29858009 gagtaatgatacatagacaccatttattcccatacacccttgtacacccc-atgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgc 29857911  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||| ||||||||||||||    
T  29857910 gggatccacgtaactacgtgtcagat 29857885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 31976426 - 31976306
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  31976426 aatgttacatagacaccatttattctcatacacccttgtacacccc-atacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 31976328  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    | || ||||| |||||||||||    
T  31976327 ttcatgtgaccacgtgtcagat 31976306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 23128044 - 23128169
Alignment:
Q  126 gagtaatgatacatataca-ccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg 224  Q
    ||||||||||||||| | | || ||||||  |||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||| |||||||||||    
T  23128044 gagtaatgatacatagagaaccttttatttccatacacccttgtacatccc-atgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtg 23128142  T
Q  225 cggggtccacgtgactacgtgtcagat 251  Q
     ||| ||||||||||||||||||||||    
T  23128143 tgggatccacgtgactacgtgtcagat 23128169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 6209384 - 6209507
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| | ||| ||||||| | |||| | ||||||| ||| ||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  6209384 gagtaatgatacatagataccctttattccc-tacatctttgtacatccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgc 6209481  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||||||||| |||||    
T  6209482 ggggtccacgtgactacgtgacagat 6209507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 31109351 - 31109442
Alignment:
Q  159 acacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||| ||||| ||||||||||||| || ||||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||    
T  31109351 acacccttgtatacccc-atgcattaggaagagaaaagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagat 31109442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 15832756 - 15832638
Alignment:
Q  129 taatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggg 228  Q
    ||||||||| || ||||| |||||||  ||||||||||||||||||| |||||||||||||  ||||||||||| |||||||||  |||  |||||| ||    
T  15832756 taatgatacgtagacaccctttattccaatacacccttgtacacccc-atgcattaggaagatagaagaggagaaaaaagagaaaatgtatttgtgcagg 15832658  T
Q  229 gtccacgtgactacgtgtca 248  Q
     |||||||||||||||||||    
T  15832657 atccacgtgactacgtgtca 15832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 31110683 - 31110803
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||| | ||||||  |||||||| ||||||||||| || |||||||||| |||||||| ||||||||||||| |||||||||||| |||    
T  31110683 aatgttacatagacatcctttatttccatacacctttgtacacccc-atacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgcaggg 31110781  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| |||  ||||||||||||    
T  31110782 tccatgtggttacgtgtcagat 31110803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 28536426 - 28536528
Alignment:
Q  146 catttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtg 245  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||| | |||||| ||| ||||||||| ||||||||||| ||||||||| ||||  ||||    
T  28536426 catttattttcatacacccttgtacacccc-atgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggggtccacatgac--cgtg 28536522  T
Q  246 tcagat 251  Q
    ||||||    
T  28536523 tcagat 28536528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 946557 - 946434
Alignment:
Q  127 agtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcg 226  Q
    |||||||||||||  ||||  |||||| |||||||  |||||||| | | ||||||||||||| |||||||||||||||||||||| ||||||| | |||    
T  946557 agtaatgatacattgacactttttattgtcatacattcttgtacatctc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgctagagcg 946459  T
Q  227 gggtccacgtgactacgtgtcagat 251  Q
    || |  ||||||||| |||||||||    
T  946458 ggatttacgtgactaggtgtcagat 946434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 4231726 - 4231606
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  4231726 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 4231628  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||  || | |||||||||||    
T  4231627 tccatatggccacgtgtcagat 4231606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 31952952 - 31953072
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| |||||||||||||||||||| |||| |||| ||||||||| ||||||| |||||||| |||  |||||||| ||||| ||||| | ||    
T  31952952 aatgttacatagacaccatttattctcatacatccttctaca-ccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttgtgtgagg 31953050  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||| |||  || ||||||||    
T  31953051 tccacatgaacacatgtcagat 31953072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 15989964 - 15990066
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||  ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  15989964 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 15990062  T
Q  230 tcca 233  Q
    ||||    
T  15990063 tcca 15990066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 30341282 - 30341384
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||  ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  30341282 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 30341380  T
Q  230 tcca 233  Q
    ||||    
T  30341381 tcca 30341384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 30870180 - 30870084
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgac 239  Q
    ||||| |||||| ||||||||| ||||||||||  ||  | ||| ||| ||||||||||||| ||||||||  ||||||||||||||||||| |||||    
T  30870180 acaccctttattttcatacacctttgtacaccct-atatactagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgac 30870084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 15507946 - 15508048
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||| ||||||||||||| ||  ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  15507946 aatgttacatagacaccttttaattgcatacatccttgtacacccc-atatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 15508044  T
Q  230 tcca 233  Q
    ||||    
T  15508045 tcca 15508048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 22422001 - 22422043
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacac 172  Q
    |||| |||||| |||||||||||||||||||||||||||||||    
T  22422001 aatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 41236529 - 41236405
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  41236529 gagtaatgatacatagacaccctttattcccatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 41236431  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  41236430 ggggtccacgtgactacgtgtcagat 41236405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 48182967 - 48183091
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  48182967 gagtaatgatacatagacaccctttattctcatacacccttgtacacccc-atgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgc 48183065  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  48183066 ggggtccacgtgactacgtgtcagat 48183091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 6034226 - 6034102
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  6034226 gagtaatgatacatagacaccttttattctcatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 6034128  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||||||||| ||||||||    
T  6034127 gggatccacgtgactacatgtcagat 6034102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 42044285 - 42044409
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||  |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  42044285 gagtaatgatacatagacaccctttatttccatacacccttgtacatccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 42044383  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  42044384 ggggtccacgtgactacgtgtcagat 42044409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 248
Target Start/End: Original strand, 24995025 - 24995146
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||||  |||||||||||    
T  24995025 gagtaatgatacatagacaccctttattcccatacaccattgtacacccc-atgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgc 24995123  T
Q  226 ggggtccacgtgactacgtgtca 248  Q
    |||||||||||||||||||||||    
T  24995124 ggggtccacgtgactacgtgtca 24995146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 41824060 - 41823940
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| |||||||||||||||||||||| ||||||||| | ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  41824060 aatgttacatagacaccatttattctcatacacctttgtacacctc-atgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcgggg 41823962  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| |||||||||||||||||    
T  41823961 tccatgtgactacgtgtcagat 41823940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 11511381 - 11511504
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| |||| |||||||  |||||||||||||||||| | |||||||| |||| |||||||| ||||||||||||| ||||||||||||    
T  11511381 gagtaatgatacatagacac-atttatttccatacacccttgtacacctc-atgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgc 11511478  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  11511479 ggggtccacgtgactacgtgtcagat 11511504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 54473453 - 54473575
Alignment:
Q  128 gtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgg 227  Q
    ||||||||||||  ||||| ||||||| ||||||||||||||||| || ||| ||||||||| ||||||||||||||||||| || ||||||||||||||    
T  54473453 gtaatgatacatgaacaccctttattcccatacacccttgtacactcc-atgtattaggaagagagaagaggagagaaaagataaagtgtgcttgtgcgg 54473551  T
Q  228 ggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||| ||||    
T  54473552 ggtccacgtgactacgtgttagat 54473575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 480395 - 480489
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  480395 catacacctttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagat 480489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 29234173 - 29234287
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| |||| ||||||||||||||||||           |||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  29234173 gagtaatgatacatagacactatttattctcatacaccc-----------catgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 29234261  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  29234262 ggggtccacgtgactacgtgtcagat 29234287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 29240064 - 29239944
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||| ||||||| |||||||||||| ||||| ||||||| ||||||||||||| |||||||| ||||||||||| ||||    
T  29240064 aatgttacatagacaccctttattcccatacactcttgtacacccc-atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgtgggg 29239966  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||| ||||    
T  29239965 tccacgtgactacgtgttagat 29239944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 50052350 - 50052470
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||| |||||||| |||||||||   ||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  50052350 aatgttacatagacaccctttattcccatacacctttgtacacctt-atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgggg 50052448  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||    
T  50052449 tccacgtgactacgtgtcagat 50052470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 23608417 - 23608293
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||| | ||||||| |||||| || |||||||| | ||||||||||||| |||||||||||| ||||||||| |||||||||||     
T  23608417 gagtaatgatacatagacatcctttattcccatacatccctgtacacctc-atgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgt 23608319  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    || || ||||||||||||||||||||    
T  23608318 ggagttcacgtgactacgtgtcagat 23608293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 31910370 - 31910250
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||||||||||| ||||||| |||||||| ||| || |||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  31910370 aatgttacatagacaccatttattcccatacactcttgtacatccc-atacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcgggg 31910272  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| ||| ||| |||||||||    
T  31910271 tccatgtggctatgtgtcagat 31910250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 53352492 - 53352608
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||||||         ||||||| |||||||||||||||||||||| || |||||||||    
T  53352492 gagtaatgatacatagacaccctttattttcatacacccttgtacacc---------taggaagagagaagaggagagaaaagagaaagtatgcttgtgc 53352582  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||| | ||||||||||||||    
T  53352583 ggggtccacttaactacgtgtcagat 53352608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 40574945 - 40574855
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    ||||| |||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||| |||||||||| |||| ||||    
T  40574945 acaccttttattctcatacacccttgtacacccc-atatattaggaagagagaagaggagagaaaagagaaagtgtgcttgttcgggatcca 40574855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 50526093 - 50526213
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||   ||||||||||||||||||| ||||| ||||||| ||||||||||||| ||| |||| | ||||||||||||      
T  50526093 aatgttacataaacaccctttatttctatacacccttgtacacccc-atgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgcggaa 50526191  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||||||||| |||||||||||    
T  50526192 tccacgtgaccacgtgtcagat 50526213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 19670638 - 19670740
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  19670638 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 19670736  T
Q  230 tcca 233  Q
    ||||    
T  19670737 tcca 19670740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 48647694 - 48647768
Alignment:
Q  177 atgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||| ||||||| ||||||||||||| ||||||||  ||||||||||||| ||||||||||| |||||| ||||    
T  48647694 atgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagat 48647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 3481786 - 3481712
Alignment:
Q  177 atgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||| ||| ||| ||||||| | ||| |||||||| ||||||||||| |||||||||||||||| |||||||||    
T  3481786 atgcactagaaagagagaagatgggaggaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagat 3481712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 17983691 - 17983767
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    |||||||||||||||||| | ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||||||    
T  17983691 catacacccttgtacacctc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtcca 17983767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 28480235 - 28480310
Alignment:
Q  176 catgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||| ||||||| ||||||||||||  || ||||| ||||| ||||| ||||||||| ||||||| ||||||||    
T  28480235 catgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagat 28480310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 28481110 - 28481185
Alignment:
Q  176 catgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||| ||||||| ||||||||||||  || ||||| ||||| ||||| ||||||||| ||||||| ||||||||    
T  28481110 catgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagat 28481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 28481985 - 28482060
Alignment:
Q  176 catgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||| ||||||| ||||||||||||  || ||||| ||||| ||||| ||||||||| ||||||| ||||||||    
T  28481985 catgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagat 28482060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 29978045 - 29977943
Alignment:
Q  148 tttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtc 247  Q
    |||||||  |||||| |||||||||||| || ||||||  || || ||||| |||  |||||||| ||||||||||| ||||||||  ||||||||||||    
T  29978045 tttattcctatacacacttgtacacccc-atacattagtgagagaaaagagaagatgaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtc 29977947  T
Q  248 agat 251  Q
    ||||    
T  29977946 agat 29977943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 55475369 - 55475267
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||| ||||||| ||||||||| |||||||| |||  |||||||| |||| ||| ||| |||    
T  55475369 aatgttacatagacaccttttaattgcatacacccttgtaca-ccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgcaggg 55475271  T
Q  230 tcca 233  Q
    ||||    
T  55475270 tcca 55475267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 47986360 - 47986284
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    |||||||||||||||| ||| ||| ||||||||| |||||||| | |  |||||||| |||| |||||||||||||||    
T  47986360 catacacccttgtacatccc-atgtattaggaagagagaagagaataagaaagagaaagtgtacttgtgcggggtcca 47986284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 50813814 - 50813934
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||| | | ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  50813814 aatgttacatagacaccttttaattgcatacacccttgtacatctc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 50813912  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    | ||  |||| || ||||||||    
T  50813913 ttcatatgaccacatgtcagat 50813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 29547881 - 29547983
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||| ||||||| ||||||||| |||||||| |||  ||||| || |||| ||| ||||||     
T  29547881 aatgttacatagacaccttttaattgcatacacccttgtaca-ccccatgtattaggaagagagaagagaagaagaaagaaaaagtgtacttatgcggga 29547979  T
Q  230 tcca 233  Q
    ||||    
T  29547980 tcca 29547983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 18924417 - 18924513
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgg 227  Q
    |||| |||||| ||||| |||| |  ||||||||||| |||| || |||| ||||||||| |||||||| |||  |||||||| |||| |||||||||    
T  18924417 aatgttacatagacaccttttaattgcatacacccttttaca-cctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgg 18924513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 56300105 - 56300181
Alignment:
Q  148 tttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||  |||||||| | | || |||||| ||| ||||||||||||| |||||||| ||||| ||||||    
T  56300105 tttattctcatacaatcttgtacatctc-atacattagaaagagagaagaggagaggaaagagaaagtgtgtttgtgc 56300181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 10249300 - 10249424
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  10249300 gagtaatgatacatagacaccctttattctcatacacccttgtacacccc-atgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgc 10249398  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  10249399 ggggtccacgtgactacgtgtcagat 10249424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 13438525 - 13438401
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  13438525 gagtaatgatacatagacaccctttattcccatacatccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 13438427  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  13438426 ggggtccacgtgactacgtgtcagat 13438401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 116 - 251
Target Start/End: Complemental strand, 28863647 - 28863513
Alignment:
Q  116 atattttgacgagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgt 215  Q
    ||||||| | ||||||||||||||| ||||| ||||||| |||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||| ||    
T  28863647 atatttttatgagtaatgatacatagacaccctttattcccatacacccttgtacacctc-atgcattaggaagagagaagaggagataaaagagaaagt 28863549  T
Q  216 gtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||||||||||||    
T  28863548 gtgcttgtgcggggtccacgtgactacgtgtcagat 28863513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 17473202 - 17473078
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  17473202 gagtaatgatacatagacaccctttattcccatacacccttgtacacctc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 17473104  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||||||||||||||||||    
T  17473103 gggatccacgtgactacgtgtcagat 17473078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 32505566 - 32505690
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |||| ||||||||||||    
T  32505566 gagtaatgatacatagacactctttattctcatacacccttgtacacccc-atgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgc 32505664  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  32505665 ggggtccacgtgactacgtgtcagat 32505690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 19930738 - 19930862
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  19930738 gagtaatgatacatagacaccttttattcccatacacccttgtacacctc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgc 19930836  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||| ||||||||||||||||    
T  19930837 ggggtccacatgactacgtgtcagat 19930862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 9058663 - 9058538
Alignment:
Q  125 cgagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg 224  Q
    |||||||||||| ||| | ||| ||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  9058663 cgagtaatgatatataaataccctttattcccatacactcttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtg 9058565  T
Q  225 cggggtccacgtgactacgtgtcagat 251  Q
    |||||||||| ||||||||||||||||    
T  9058564 cggggtccacatgactacgtgtcagat 9058538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 7465653 - 7465777
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||| | ||||||||||||| ||||||| |||| ||||||||| |||||||||||     
T  7465653 gagtaatgatacatagacaccctttattcccatacacccttgtacacctc-atgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgt 7465751  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  7465752 ggggtccacgtgactacgtgtcagat 7465777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 33436020 - 33436142
Alignment:
Q  128 gtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgg 227  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  33436020 gtaatgatgcatagacaccttttattctcatacacccttgtacacctc-atgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcgg 33436118  T
Q  228 ggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||| ||||    
T  33436119 ggtccacgtgactacgtgttagat 33436142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 20700993 - 20700873
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||| |||||||| |||||||| |||||||    
T  20700993 aatgttacatagacaccctttattcccatacacccttgtacacccc-atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcgggg 20700895  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||    
T  20700894 tccacgtgactacgtgtcagat 20700873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 40701660 - 40701536
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||  |||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||| ||||| ||||||    
T  40701660 gagtaatgatacatagacaccttttatttccatacacccttgtacacccg-atgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgc 40701562  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||| ||||||||||||||    
T  40701561 ggggtccacgtaactacgtgtcagat 40701536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 30915646 - 30915521
Alignment:
Q  125 cgagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg 224  Q
    |||||||||||||||| ||| |  |||||  |||||||||||||||||||| ||| ||||||||| ||||||| |||||||||||||| ||||||||||     
T  30915646 cgagtaatgatacatagacatccattatttccatacacccttgtacacccc-atgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgta 30915548  T
Q  225 cggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||||||||||||||||    
T  30915547 cggggtccacgtgactacgtgtcagat 30915521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 28381573 - 28381697
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||| ||  ||||||||| ||||||| |||||||||||||| ||||||||||||    
T  28381573 gagtaatgatacatagacaccctttattcccatacatccttgtacacccc-atatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgc 28381671  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    || ||||| |||||||||||||||||    
T  28381672 ggagtccatgtgactacgtgtcagat 28381697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 38882729 - 38882856
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||||||||||| || ||||  ||||||||||||| ||| ||||||||    
T  38882729 gagtaatgatacatagagaccatttattcccatacacccttgtaca-ccccatgcattaggaagagataagataagagaaaagagaaagtgcgcttgtgc 38882827  T
Q  226 ---ggggtccacgtgactacgtgtcagat 251  Q
       ||||||||||||||||||||||||||    
T  38882828 gggggggtccacgtgactacgtgtcagat 38882856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 4060867 - 4060743
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||| | ||||||  |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| |||| |||||||| |||    
T  4060867 gagtaatgatacataaacatcttttatttccatacacccttgtacacccc-atgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgc 4060769  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||| ||||||||||||||    
T  4060768 gggatccacgtaactacgtgtcagat 4060743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 38273070 - 38273184
Alignment:
Q  135 tacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccac 234  Q
    |||||| |||||||||||||||||||| | ||||||||||| || |||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||     
T  38273070 tacataaacaccatttattctcatacatc-ttgtacacccc-atacattaggaagagagaataggagagaaaagagaaagtgtgctagtgcggggtccat 38273167  T
Q  235 gtgactacgtgtcagat 251  Q
    ||| |||||||||||||    
T  38273168 gtggctacgtgtcagat 38273184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 36169014 - 36168897
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||||||||||| |||||||||||| || |||||||||| ||||| |||||||||||||||| || |||||||||||||    
T  36169014 aatgttacataaacaccctttattctcatacactcttgtacacccc-atacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcgggg 36168916  T
Q  230 tccacgtgactacgtgtca 248  Q
    |||| ||| | ||||||||    
T  36168915 tccatgtggccacgtgtca 36168897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 2533293 - 2533181
Alignment:
Q  138 atatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtg 237  Q
    ||||||||| ||||||| |||||||||||||||||||| || |||| ||||| |||||||||||| |||||| || |||||||||||||||||| | |||    
T  2533293 atatacaccctttattcccatacacccttgtacacccc-atacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgcggggtctatgtg 2533195  T
Q  238 actacgtgtcagat 251  Q
     |||||||||||||    
T  2533194 gctacgtgtcagat 2533181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 40613824 - 40613944
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||| || ||||| ||||  |||| |||||||||||||||| ||||||||||||||||    
T  40613824 aatgttacatagacaccctttattcccatacacccttgtacacccc-atacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgcgggg 40613922  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| ||| | |||||||||||    
T  40613923 tccatgtggccacgtgtcagat 40613944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 42257366 - 42257251
Alignment:
Q  135 tacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccac 234  Q
    |||||| ||||| ||||||   |||||| |||||||||||| || ||||||||||  ||||||||||||||||||||| ||||||||||||||||||||     
T  42257366 tacatagacaccctttatttctatacactcttgtacacccc-atacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcggggtccat 42257268  T
Q  235 gtgactacgtgtcagat 251  Q
    ||| | |||||||||||    
T  42257267 gtggccacgtgtcagat 42257251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 5574418 - 5574530
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||| || |||||||||||||            ||||||||||| ||||||||||||    
T  5574418 gagtaatgatacatagacaccctttattcccatacacccttgtacacgcc-atgcattaggaag------------agaaaagagaaagtgtgcttgtgc 5574504  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||||||||||||||||||    
T  5574505 gggatccacgtgactacgtgtcagat 5574530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 44152105 - 44152012
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg 224  Q
    |||| |||||| ||||| ||||||| |||||||||||||| | | | ||||||||||||| ||||||||||||  |||||||| |||||||||||    
T  44152105 aatgttacataaacaccttttattcgcatacacccttgtatatctc-atgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtg 44152012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 13365531 - 13365429
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  ||| |||||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  13365531 aatgttacatagacaccttttaattgcattcacccttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 13365433  T
Q  230 tcca 233  Q
    ||||    
T  13365432 tcca 13365429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 41758765 - 41758684
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaa 212  Q
    |||| |||||| ||||  |||||||||||||| ||||||||| ||||||  ||||||||| |||||||||||| |||||||||    
T  41758765 aatgttacatagacacattttattctcatacatccttgtaca-ccccatatattaggaagagagaagaggagataaaagagaa 41758684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 2997435 - 2997511
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    |||||||||||||||||| | ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||||||    
T  2997435 catacacccttgtacacctc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtcca 2997511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 27864873 - 27864762
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||  |||||| ||||||||| |             |||||||| |||||||| |||    
T  27864873 gagtaatgatacattgacaccctttattctcatacacccttgtaca-tcccatgtattaggaagag-------------aaagagaaagtgtgcttttgc 27864788  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||| ||||||||||||    
T  27864787 ggggtccacgtgattacgtgtcagat 27864762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 17819971 - 17820046
Alignment:
Q  176 catgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||| ||||||||||||  ||||||||  |||| ||||| ||||||||||| || || ||||||||    
T  17819971 catgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagat 17820046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 43490299 - 43490197
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||  ||| ||||||||| |||||||| |||  ||||| || |||| |||||||||||    
T  43490299 aatgttacatagacaccttttaattgcatacacccttgtacaccct-atgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcgggg 43490201  T
Q  230 tcca 233  Q
    ||||    
T  43490200 tcca 43490197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 3440157 - 3440052
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||  |||||||| ||||||||||  ||    ||| ||| ||||||||||||| ||||||||  |||||||||||||||    
T  3440157 aatgttacatagacaccctttatttccatacacctttgtacaccct-atattctagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcgggg 3440059  T
Q  230 tccacgt 236  Q
    |||||||    
T  3440058 tccacgt 3440052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 26891476 - 26891546
Alignment:
Q  181 attaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||||| |||||||| |||| ||||||||  ||||||||| || |||||||||||| || ||||||||    
T  26891476 attaggaagagagaagagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagat 26891546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 3738121 - 3738001
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| | |||| ||||||||| ||||||||||  ||    |||||||  |||||||||||| ||| ||||  |||||||||||||||    
T  3738121 aatgttacatagacaccctatattttcatacacctttgtacaccct-atattctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcgggg 3738023  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||| |||| || ||||||||    
T  3738022 tccacatgaccacatgtcagat 3738001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 38732532 - 38732412
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||| ||||||||| | | ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  38732532 aatgttacatagacaccttttaattgcatacatccttgtacatctc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 38732434  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||  |||| || ||||||||    
T  38732433 tccatatgaccacatgtcagat 38732412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 17823966 - 17823864
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||| | ||||||  |||||||||||||||| ||||||  ||| ||||| ||||||| ||||  |||||||| ||||||||||  ||||    
T  17823966 aatgttacatagacatcctttatttacatacacccttgtaca-ccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatgggg 17823868  T
Q  230 tcca 233  Q
    ||||    
T  17823867 tcca 17823864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 44728705 - 44728659
Alignment:
Q  42 ttttcatacactcattctacaccatattttctctctatctatctctt 88  Q
    ||||||||||||||||| ||||| ||||||| |||||||| ||||||    
T  44728705 ttttcatacactcattcaacaccttattttcgctctatctctctctt 44728659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 3034905 - 3035025
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||| | ||||||| | ||| ||||||||| |||||||| |||  |||||||| || | |||||||||||    
T  3034905 aatgttacatagacaccttttaattgcatacaccttggtacacctc-atgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcgggg 3035003  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||  |||| || ||||||||    
T  3035004 tccatatgaccacatgtcagat 3035025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 41575271 - 41575198
Alignment:
Q  176 catgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg-cggggtccacgtgactacgtgtca 248  Q
    |||||||||||| | ||||||||||||  |||||||| |||||||||||  ||||||||| |||| || |||||    
T  41575271 catgcattaggacgagagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtca 41575198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 45097683 - 45097759
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    ||||||| |||||||| ||  ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||||||    
T  45097683 catacactcttgtacatccg-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtcca 45097759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 8080301 - 8080425
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  8080301 gagtaatgatacatagacaccctttattcccatacacccttgtacacccc-atgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 8080399  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  8080400 ggggtccacgtgactacgtgtcagat 8080425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 19330024 - 19329900
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  19330024 gagtaatgatacatagacaccctttattcccatacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 19329926  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||| ||||||||||||    
T  19329925 ggggtccacgtgattacgtgtcagat 19329900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 4999432 - 4999556
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||| ||||| ||||||    
T  4999432 gagtaatgatacatagacaccttttattctcatacacccttgtacacccc-atgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgc 4999530  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||| ||||||    
T  4999531 ggggtccacgtgactacgtatcagat 4999556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 32951411 - 32951535
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  32951411 gagtaatgatacatagacaccccttattctcatacacccttgtacacccc-atgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 32951509  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||| ||||    
T  32951510 ggggtccacgtgactacgtgttagat 32951535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 38837399 - 38837275
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||  |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  38837399 gagtaatgatacatagacaccctttatttccatacacccttgtacatccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 38837301  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  38837300 ggggtccacgtgactacgtgtcagat 38837275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 35137715 - 35137591
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    |||||||||| |||| | ||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  35137715 gagtaatgatccatagataccatttgttctcatacacccttgtacatccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgc 35137617  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||| ||||    
T  35137616 ggggtccacgtgactacgtgttagat 35137591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 40957889 - 40957765
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| |||||  ||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||| |    
T  40957889 gagtaatgatacatagacacccattattttcatacacccttgtacacccc-atgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtac 40957791  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||||||||||||||||||    
T  40957790 gggatccacgtgactacgtgtcagat 40957765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 19436114 - 19436229
Alignment:
Q  135 tacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccac 234  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||||| |||||||| |||||| |||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacacccc-atgcattaggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccac 19436212  T
Q  235 gtgactacgtgtcagat 251  Q
    |||||||||||||||||    
T  19436213 gtgactacgtgtcagat 19436229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 38267222 - 38267098
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| | | ||||||||  |||||||| | ||||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  38267222 gagtaatgatacatagatatcatttatttccatacaccttcgtacatccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 38267124  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  38267123 ggggtccacgtgactacgtgtcagat 38267098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 7389570 - 7389447
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||| | ||||||| |||||||||| ||||||||| ||| ||||||||| ||||  |||||||||||||||| ||||||||||||    
T  7389570 gagtaatgatacatagacatcctttattcccatacaccct-gtacacccc-atgtattaggaagagagagtaggagagaaaagagaaagtgtgcttgtgc 7389473  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  7389472 ggggtccacgtgactacgtgtcagat 7389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 3784155 - 3784053
Alignment:
Q  148 tttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtc 247  Q
    ||||||| ||||||  |||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  3784155 tttattcacatacattcttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtc 3784057  T
Q  248 agat 251  Q
    ||||    
T  3784056 agat 3784053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 11044360 - 11044238
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||  |||||| ||||||||| ||||||||| | ||||||||||||| ||||||| ||||| |||||||| |||| |||||||    
T  11044360 gagtaatgatacatagacactctttattttcatacacctttgtacacctc-atgcattaggaagagagaagatgagaggaaagagaaagtgtacttgtgc 11044262  T
Q  226 ggggtccacgtgactacgtgtcag 249  Q
    ||||||||||||||||||||||||    
T  11044261 ggggtccacgtgactacgtgtcag 11044238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 35523054 - 35522934
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||| || |||||||||| ||||||| |||||||||||||| |||||||||||||||     
T  35523054 aatgttacataaacaccatttattcccatacacccttgtacacccc-atacattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggga 35522956  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||  || | |||||||||||    
T  35522955 tccatatggccacgtgtcagat 35522934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 46033723 - 46033843
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||  | ||||||||||| |    
T  46033723 aatgttacatagacaccatttattctcatacacccttgtacacccc-atacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgcggag 46033821  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    | || ||||| |||||||||||    
T  46033822 ttcatgtgaccacgtgtcagat 46033843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 3694519 - 3694425
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  3694519 catacactcttgtacacccc-atgcattgggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagat 3694425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 31736037 - 31735940
Alignment:
Q  148 tttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgt 246  Q
    ||||||| |||||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||| | ||||||    
T  31736037 tttattcccatacacccttgtacacccc-atacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgt 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 3434734 - 3434622
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||| |||||||||||||          ||||||||||||| ||||||||||||    
T  3434734 gagtaatgatacatagacaccctttattcccatacagccttgtacacccc-atgcattaggaag----------agagaaaagagaaagtgtgcttgtgc 3434646  T
Q  226 ggggtccacgtgactacgtgtcag 249  Q
    ||| ||||||||||||||||||||    
T  3434645 gggatccacgtgactacgtgtcag 3434622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 16374746 - 16374866
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||||||||||||| |||||||| || || |||||||||| ||||| | ||||  |||||||||||||||||||| | |     
T  16374746 aatgttacatagacaccctttattctcatacacctttgtacactcc-atacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtgaga 16374844  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||||||||| |||||||||||    
T  16374845 tccacgtgaccacgtgtcagat 16374866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 36362196 - 36362084
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||| |||||||||            ||||||||||| |||||||||||     
T  36362196 gagtaatgatacatagacaccctttattctcatacacccttgtacatccc-atgtattaggaag------------agaaaagagaaagtgtgcttgtgt 36362110  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  36362109 ggggtccacgtgactacgtgtcagat 36362084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 21234579 - 21234462
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||||||||||||| ||||||||||| || |||||||||| ||| | |||||||  |||||||  |||||||||||||||    
T  21234579 aatgttacatagacaccttttattctcatacaccattgtacacccc-atacattaggaagagaggaaaggagaggtaagagaaaatgtgcttgtgcgggg 21234481  T
Q  230 tccacgtgactacgtgtca 248  Q
    | || ||| ||||||||||    
T  21234480 tacatgtggctacgtgtca 21234462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 41423860 - 41423740
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||||||||||||| ||||||||||| ||||| ||||||| ||||||||||||  ||||||||  | ||||||| ||||     
T  41423860 aatgttacataaacaccctttattctcatacacctttgtacacccc-atgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacggga 41423762  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    || ||||||| || ||||||||    
T  41423761 tctacgtgaccacatgtcagat 41423740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 36361843 - 36361955
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||  || ||| |||||||||            ||||||||||| |||||||||||     
T  36361843 gagtaatgatacatagacaccctttattctcatacacccttgtacattcc-atgtattaggaag------------agaaaagagaaagtgtgcttgtgt 36361929  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  36361930 ggggtccacgtgactacgtgtcagat 36361955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 8238365 - 8238271
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||||||  ||||||| ||||||||    
T  8238365 catacacccttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagat 8238271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 26296810 - 26296720
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    ||||||| ||||  |||||||||||||||||| | || ||||| |||| ||||||||||||||||||||||  || ||||||||||||||||    
T  26296810 acaccatatatttccatacacccttgtacacctc-atacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcggggtcca 26296720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 36208306 - 36208233
Alignment:
Q  176 catgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcag 249  Q
    |||||| ||||||| ||||||||||||| ||||||||  ||||||||||| ||||||||||||| || ||||||    
T  36208306 catgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcag 36208233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 38044375 - 38044255
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||| ||||||||| || ||||| |||  |||||||| |||| |||||||||||    
T  38044375 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcgggg 38044277  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||  || |||| ||||||||    
T  38044276 tccatatggctacatgtcagat 38044255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 35468777 - 35468880
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||||||||| |||||||||||||| |||| ||||  | |||| | ||||||| |||||||||| || |||||||| ||||| |||||| |||    
T  35468777 aatgttacatatacaccttttattctcatacatccttataca-tctcatgaactaggaagagagaagaggataggaaagagaaagtgtgtttgtgcaggg 35468875  T
Q  230 tccac 234  Q
    |||||    
T  35468876 tccac 35468880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 22343539 - 22343437
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||| | ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  22343539 aatgttacatagacaccttttaattgcatacacccttgtacacctc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 22343441  T
Q  230 tcca 233  Q
    ||||    
T  22343440 tcca 22343437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 41915919 - 41915817
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||  ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  41915919 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 41915821  T
Q  230 tcca 233  Q
    ||||    
T  41915820 tcca 41915817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 18207339 - 18207251
Alignment:
Q  148 tttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtg 237  Q
    |||||| |||||||||||||||||| |  || || ||||||| ||||||||||||  |||||||| ||||||||||| ||||| ||||||    
T  18207339 tttattatcatacacccttgtacactct-atccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtg 18207251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 27744243 - 27744351
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgacta 241  Q
    ||||||||||||| |||| | ||||||||| ||| ||||| ||||||| ||||||||||||| | ||||||  ||||||| || ||| |||||||| | |    
T  27744243 acaccatttattcccatatatccttgtacatccc-atgcactaggaagagagaagaggagaggatagagaaaatgtgcttatgagggatccacgtggcca 27744341  T
Q  242 cgtgtcagat 251  Q
    | ||||||||    
T  27744342 catgtcagat 27744351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 46374746 - 46374804
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaag 189  Q
    |||| |||||| ||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  46374746 aatgttacatagacaccatttattcccatacacccttgtaca-ccccatacattaggaag 46374804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 7728084 - 7727964
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||| ||||||||||||| ||  ||||||||| |||||||| |||  ||| |||| |||| |||||||||||    
T  7728084 aatgttacatagacaccttttaattgcatacatccttgtacacccc-atatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcgggg 7727986  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||  |||| || ||||||||    
T  7727985 tccatatgaccacatgtcagat 7727964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 32564374 - 32564450
Alignment:
Q  156 catacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtcca 233  Q
    |||||||||||||||||| | ||| ||||||||| |||||||| |||  |||||||| ||||  ||||||||||||||    
T  32564374 catacacccttgtacacctc-atgtattaggaagagagaagagaagaagaaagagaaagtgtatttgtgcggggtcca 32564450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 33644382 - 33644258
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  33644382 gagtaatgatacatagacaccctttattcccatacacccttatacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 33644284  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  33644283 ggggtccacgtgactacgtgtcagat 33644258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 53982193 - 53982069
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  53982193 gagtaatgatacatagacaccctttattcccatacaaccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 53982095  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  53982094 ggggtccacgtgactacgtgtcagat 53982069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 31456871 - 31456747
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| ||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  31456871 gagtaatgatacataaacaccctttattcccatgcacccttgtacacccc-atgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgc 31456773  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||| ||||||||||||||||    
T  31456772 ggggtccacatgactacgtgtcagat 31456747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 17470587 - 17470463
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||||||||||||||||||   ||||||| ||| ||||||||||||| ||||||| |||||||||||||| |||||||||||     
T  17470587 gagtaatgatacatagacaccatttattctcatacatatttgtacatccc-atgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgt 17470489  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  17470488 ggggtccacgtgactacgtgtcagat 17470463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 251
Target Start/End: Complemental strand, 49607603 - 49607472
Alignment:
Q  119 ttttgacgagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtg 218  Q
    |||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||  | ||||||||||||| || ||||||||||||||||||| |||||    
T  49607603 tttttacgagtaatgatacatagacaccctttattcccatacacccttgtacacgtc-atgcattaggaagagaaaagaggagagaaaagagaaagtgtg 49607505  T
Q  219 cttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||| ||| ||||||||||||||||||||||    
T  49607504 cttgtgtgggatccacgtgactacgtgtcagat 49607472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 8076571 - 8076451
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| |||||||||||||||||||||  ||||||||||| ||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  8076571 aatgttacatagacaccatttattctcatacacttttgtacacccc-atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgggg 8076473  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||| ||||    
T  8076472 tccacgtgactacgtgttagat 8076451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 52629482 - 52629358
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| |||||  |||||  |||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||||| |||||||||| |    
T  52629482 gagtaatgatacatagacacccattatttccatacacccttgtacatccc-atgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtac 52629384  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  52629383 ggggtccacgtgactacgtgtcagat 52629358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 54868813 - 54868937
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||  |||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||| ||||| ||||||    
T  54868813 gagtaatgatacatagacaccttttatttccatacacccttgtacaccct-atgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgc 54868911  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||| ||||||||||||||    
T  54868912 ggggtccacgtaactacgtgtcagat 54868937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 20764837 - 20764957
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| || |||||||||| ||||||| |||||||||||||| |||||||||| |||||    
T  20764837 aatgttacatagacaccatttattctcatacacccttgtacacccc-atacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggg 20764935  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| ||| | |||||||||||    
T  20764936 tccatgtggccacgtgtcagat 20764957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 9563179 - 9563057
Alignment:
Q  128 gtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgg 227  Q
    ||||||||||||| | ||| ||||||| |||||||| ||||||| | | ||||||||||||| ||||||||||||||| |||||| ||||| |||||| |    
T  9563179 gtaatgatacatagataccctttattcccatacacctttgtacaactc-atgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcag 9563081  T
Q  228 ggtccacgtgactacgtgtcagat 251  Q
    | ||||||||||||||||||||||    
T  9563080 gatccacgtgactacgtgtcagat 9563057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 11347844 - 11347964
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||| ||||||||||| |||||||| || |||||||||| |||||||||||||||||||||| |||||||| ||| |||    
T  11347844 aatggtacatagacaccctttattcccatacacccttatacacccc-atacattaggaagagagaagaggagagaaaagagaaagtgtgcttatgcaggg 11347942  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| ||| | |||||||||||    
T  11347943 tccatgtggccacgtgtcagat 11347964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 51419282 - 51419402
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||  |||||||||||||||||||| || |||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  51419282 aatgttacataaacaccttttatttccatacacccttgtacacccc-atacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcgggg 51419380  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    || | ||| | |||||||||||    
T  51419381 tctatgtggccacgtgtcagat 51419402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 36707347 - 36707466
Alignment:
Q  127 agtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcg 226  Q
    |||||||||||||| ||||| ||||||| ||||||  |||||||||| | ||||||||||||| |||||||||||||||||||||| ||||||    |||    
T  36707347 agtaatgatacatagacaccttttattcccatacattcttgtacacctc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgc----gcg 36707441  T
Q  227 gggtccacgtgactacgtgtcagat 251  Q
    || ||||||| ||||||||||||||    
T  36707442 ggatccacgtaactacgtgtcagat 36707466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 26141452 - 26141574
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaaggga--gaagaggagagaaaagagaatgtgtgcttgtgcgg 227  Q
    |||| |||||| ||||| ||||||  ||||||| |||||||||||| || |||||||||| ||  |||||||||||||||||||| ||||||||||| ||    
T  26141452 aatgttacatagacaccctttatttccatacactcttgtacacccc-atacattaggaagagaaagaagaggagagaaaagagaaagtgtgcttgtgtgg 26141550  T
Q  228 ggtccacgtgactacgtgtcagat 251  Q
    |||||| ||||| |||||||||||    
T  26141551 ggtccatgtgaccacgtgtcagat 26141574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 30801655 - 30801772
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||||||||||||||||||||| ||||||| | ||||||| ||||||| ||||| ||||||||  |||||||||| ||||    
T  30801655 aatgttacatagacaccttttattctcatacacccttgtaca-ccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgtgtgggg 30801753  T
Q  230 tccacgtgactacgtgtca 248  Q
    ||||  ||||||| |||||    
T  30801754 tccatatgactacatgtca 30801772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 41189686 - 41189803
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||  ||||||| ||||||||| || || ||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  41189686 aatgttacatagacaccctttatttccatacactcttgtacactcc-atacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcgggg 41189784  T
Q  230 tccacgtgactacgtgtca 248  Q
    |||| ||| | ||||||||    
T  41189785 tccatgtggccacgtgtca 41189803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 35536804 - 35536687
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||||| |||  |||||| | |||||||||||   ||    
T  35536804 aatgttacatagacaccatttattctcatacacccttctaca-ccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgtaagg 35536706  T
Q  230 tccacgtgactacgtgtca 248  Q
    ||||| |||| ||||||||    
T  35536705 tccacatgaccacgtgtca 35536687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 48587019 - 48587133
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||| ||||||||||| ||| |||||||||||||          ||||||||||||| |||| |||||||    
T  48587019 gagtaatgatacatagacaccctttattcccatatacccttgtacatccc-atgcattaggaag----------agagaaaagagaaagtgtacttgtgc 48587107  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||||||||||||||||||    
T  48587108 gggatccacgtgactacgtgtcagat 48587133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 47532043 - 47531923
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||| ||||||| ||||||||  || || |||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  47532043 aatgttacataaacaccctttattcccatacacacttgtacattcc-atacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcgggg 47531945  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    | ||  || | |||||||||||    
T  47531944 ttcatatggccacgtgtcagat 47531923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 35965704 - 35965810
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||||||||||||||||||||| || |||| |||| |||  || |||||||||| |||||||| |||||||||||| ||     
T  35965704 aatgttacatagacaccttttattctcatacacccttgtaca-cctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtgcttgtgcagga 35965802  T
Q  230 tccacgtg 237  Q
    ||||||||    
T  35965803 tccacgtg 35965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 11095285 - 11095356
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagag 198  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||| || |||||    
T  11095285 gagtaatgatacatagacaccctttattctcatacacccttgtaca-cccgatgcattaggaagagaaaagag 11095356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 251
Target Start/End: Original strand, 27714822 - 27714933
Alignment:
Q  127 agtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcg 226  Q
    |||||||||||||||||||  ||||||||| |||||||||||||| ||||||| ||| |||            ||||| ||||||| |||||||||||||    
T  27714822 agtaatgatacatatacactctttattctcgtacacccttgtaca-ccccatgtattggga------------agagagaagagaaagtgtgcttgtgcg 27714908  T
Q  227 gggtccacgtgactacgtgtcagat 251  Q
    |||||||| ||||||||||||||||    
T  27714909 gggtccacatgactacgtgtcagat 27714933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 248
Target Start/End: Original strand, 33118784 - 33118890
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaag-aggagagaaaagagaatgtgtgcttgtgcggggtccacgtgact 240  Q
    ||||| ||||||  |||||||||||||||||||| ||||| |||| || |||||| ||||||| |||||||| ||||| || || ||| |||||||||||    
T  33118784 acaccctttatttccatacacccttgtacacccc-atgcactagggagagagaaggaggagaggaaagagaaagtgtgtttctgagggatccacgtgact 33118882  T
Q  241 acgtgtca 248  Q
    ||||||||    
T  33118883 acgtgtca 33118890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 36331251 - 36331353
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||||||| | |||| |  |||||||||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  36331251 aatgttacatatacatcttttaattgcatacacccttgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 36331349  T
Q  230 tcca 233  Q
    ||||    
T  36331350 tcca 36331353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 14623761 - 14623881
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| |||||||||||||||||||| |||| |||| || |||||| ||| ||| |||||||| |||  |||||||| ||||||||||| | ||    
T  14623761 aatgttacatagacaccatttattctcatacatccttctaca-cctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtgagg 14623859  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||| |||  || ||||||||    
T  14623860 tccacatgaacacatgtcagat 14623881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 26754821 - 26754753
Alignment:
Q  183 taggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||| ||||||||||||| ||||||||  ||||||||||||||||||| ||||| || ||||||||    
T  26754821 taggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagat 26754753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 13897989 - 13898097
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgacta 241  Q
    |||||||||||||||||||||  || |||||||| || || |||| || |||||||| |||  |||||||| ||||||||||| | ||||||| |||  |    
T  13897989 acaccatttattctcatacacttttctacacccc-atacactagggagagagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaaca 13898087  T
Q  242 cgtgtcagat 251  Q
    ||||||||||    
T  13898088 cgtgtcagat 13898097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 48375680 - 48375736
Alignment:
Q  183 taggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgac 239  Q
    ||||||| ||||||||||||| ||||||||  ||||||||||||||||||| |||||    
T  48375680 taggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgac 48375736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 11907488 - 11907429
Alignment:
Q  192 agaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||||||||||  |||||||||||||||||||  |||| || ||||||||    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagat 11907429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 45058475 - 45058577
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||| ||||||||||| ||| ||||||||| |||||||| |||  |||||||| || | |||||||||||    
T  45058475 aatgttacatagacaccttttaattgcatacaccattgtacacccc-atgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcgggg 45058573  T
Q  230 tcca 233  Q
    ||||    
T  45058574 tcca 45058577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 1758404 - 1758483
Alignment:
Q  155 tcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgt 236  Q
    ||||||||| ||||||||||  ||||||||||||| ||||||||||||  ||||||||  |||| ||||| || ||||||||    
T  1758404 tcatacacctttgtacaccc--atgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggagtccacgt 1758483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 8956940 - 8956847
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg 224  Q
    |||| |||||| ||| ||||||||||||||||||||| |||| |||  |||| ||||||| |||||||| |||  |||||| | |||||||||||    
T  8956940 aatgttacatagacagcatttattctcatacacccttctaca-ccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtg 8956847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 24699928 - 24699996
Alignment:
Q  183 taggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||| ||||||||||||| |||||||| ||||| |||| | ||||||||||| | ||||| |||||    
T  24699928 taggaagagagaagaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagat 24699996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 39670161 - 39670072
Alignment:
Q  158 tacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtca 248  Q
    |||||||||||||| | | || ||||| |||| |||||||||||||||||||| | |||||| ||| || ||||||| |||  ||||||||    
T  39670161 tacacccttgtacatctc-atacattaagaagagagaagaggagagaaaagaggaagtgtgcgtgtacgaggtccacatgatcacgtgtca 39670072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 43746517 - 43746436
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaa 212  Q
    |||| |||||| ||||| ||| || ||||||||||||||||| || |||||| |||||||  |||||||||||  ||||||||    
T  43746517 aatgttacataaacaccctttgttgtcatacacccttgtaca-cctcatgcactaggaagaaagaagaggagatgaaagagaa 43746436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 126 - 248
Target Start/End: Original strand, 33149556 - 33149677
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  33149556 gagtaatgatacatagacaccctttattctcgtacacccttgtacacccc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 33149654  T
Q  226 ggggtccacgtgactacgtgtca 248  Q
    ||| |||||||||||||||||||    
T  33149655 gggatccacgtgactacgtgtca 33149677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 18520802 - 18520926
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  18520802 gagtaatgatacatagacaccctttattttcatacacccttgtacacctc-atgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgc 18520900  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  18520901 ggggtccacgtgactacgtgtcagat 18520926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 40145589 - 40145465
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||| |  |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  40145589 gagtaatgatacatagacaccctttattctcatatacccttgtacacctcg-tgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 40145491  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||    
T  40145490 ggggtccacgtgactacgtgtcagat 40145465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 2740456 - 2740332
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  2740456 gagtaatgatacatagacaccctttattcccatacacccttgtacatccc-atgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgc 2740358  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||||||||||||||||||    
T  2740357 gggatccacgtgactacgtgtcagat 2740332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 124 - 251
Target Start/End: Complemental strand, 14831998 - 14831872
Alignment:
Q  124 acgagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgt 223  Q
    ||||||||||||||||| ||||| ||||||| |||||| ||||||||||||| ||||||||||||| |||||||||||| |||| |||| ||||||||||    
T  14831998 acgagtaatgatacatagacaccctttattcccatacatccttgtacacccc-atgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgt 14831900  T
Q  224 gcggggtccacgtgactacgtgtcagat 251  Q
    ||||| ||||||||||||||||||||||    
T  14831899 gcgggatccacgtgactacgtgtcagat 14831872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 13811834 - 13811710
Alignment:
Q  125 cgagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg 224  Q
    |||||||| ||||||| ||||||||||||| |||||| ||||||||| ||| ||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  13811834 cgagtaat-atacatagacaccatttattcccatacatccttgtacatccc-atgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtg 13811737  T
Q  225 cggggtccacgtgactacgtgtcagat 251  Q
    |||||||||||||||||||||||||||    
T  13811736 cggggtccacgtgactacgtgtcagat 13811710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 35785381 - 35785257
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| ||||||  |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||||| ||||||    
T  35785381 gagtaatgatacatagacaccttttatttccatacacccttgtacacccc-atgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgc 35785283  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||| ||||||||||||||    
T  35785282 gggatccacgtaactacgtgtcagat 35785257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 36732876 - 36732984
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgacta 241  Q
    ||||| ||||||| |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36732876 acaccctttattcccatacacccttgtacacctc-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgacta 36732974  T
Q  242 cgtgtcagat 251  Q
     |||||||||    
T  36732975 tgtgtcagat 36732984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 15409532 - 15409652
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||| || |||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  15409532 aatgttacataaacaccctttattcgcatacacccttgtacacccc-atacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgcgggg 15409630  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| ||| |||||||||||||    
T  15409631 tccatgtggctacgtgtcagat 15409652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 31009166 - 31009046
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||||||||||||| ||||||||||| ||||| ||||||| |||||||| |||| ||| |||| |||||||||||||||     
T  31009166 aatgttacatagacaccctttattctcatacacctttgtacacccc-atgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgcggga 31009068  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||    
T  31009067 tccacgtgactacgtgtcagat 31009046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 6679876 - 6679756
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||| |||||||| ||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||  |||| ||||||||||    
T  6679876 aatgttacatagacatcatttattgtcatacacccttgtacaccct-atacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcgggg 6679778  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||| ||||| |||||||||||    
T  6679777 tccatgtgaccacgtgtcagat 6679756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 26720678 - 26720574
Alignment:
Q  146 catttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtg 245  Q
    |||||||||||||||||||| ||||||||| || |||||||||| |||||||| ||||||||||||| ||||||||||||||| |||| ||| | |||||    
T  26720678 catttattctcatacaccctagtacacccc-atacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtg 26720580  T
Q  246 tcagat 251  Q
    ||||||    
T  26720579 tcagat 26720574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 26990427 - 26990323
Alignment:
Q  146 catttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtg 245  Q
    |||||||||||||||||||| ||||||||| || |||||||||| |||||||| ||||||||||||| ||||||||||||||| |||| ||| | |||||    
T  26990427 catttattctcatacaccctagtacacccc-atacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtg 26990329  T
Q  246 tcagat 251  Q
    ||||||    
T  26990328 tcagat 26990323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 35943814 - 35943934
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||  ||||||  |||||||||||||||||||| ||||| ||||||| || |||||||||| |||||||| ||||||||||| |||     
T  35943814 aatgttacatagacacattttatttccatacacccttgtacacccc-atgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtggga 35943912  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||||| ||||||||||||||    
T  35943913 tccacgtaactacgtgtcagat 35943934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 36875538 - 36875644
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||||||||||    | |||||||||||||||| ||| ||||||||| |||||||||||| ||||||||| |||||||||||||||     
T  36875538 aatgttacatagacaccatttatt----tccacccttgtacacccc-atgtattaggaagagagaagaggagaaaaaagagaaagtgtgcttgtgcggga 36875632  T
Q  230 tccacgtgacta 241  Q
    ||||||||||||    
T  36875633 tccacgtgacta 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 251
Target Start/End: Complemental strand, 28177911 - 28177833
Alignment:
Q  173 ccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||| |||||||||| | |||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||    
T  28177911 ccccatacattaggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagat 28177833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 42414275 - 42414344
Alignment:
Q  182 ttaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||||||| |||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||    
T  42414275 ttaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagat 42414344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 31132516 - 31132402
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||| || |||||||||| ||          ||||||||||| || || |||||||||    
T  31132516 gagtaatgatacataaacaccctttattttcatacacccttgtaca-cctcatgcattagaaa----------gagagaaaagaaaaagtatgcttgtgc 31132428  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||| ||||||||    
T  31132427 ggggtccacgtgactacttgtcagat 31132402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 224
Target Start/End: Original strand, 33825258 - 33825339
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtg 224  Q
    |||||||||||||||||||| |||| |||||||| ||||| ||||||| |||||||| ||| ||||||||| |||||||||||    
T  33825258 acaccatttattctcatacagccttctacacccc-atgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtg 33825339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 237
Target Start/End: Complemental strand, 2177524 - 2177436
Alignment:
Q  148 tttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtg 237  Q
    |||||||||||||||||||||||| ||  ||||| ||||||| ||||||||||||| ||||||||  |||||||||| ||| ||||||||    
T  2177524 tttattctcatacacccttgtacatcca-atgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtgtgggatccacgtg 2177436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 2252090 - 2252192
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||  ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  2252090 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 2252188  T
Q  230 tcca 233  Q
    ||||    
T  2252189 tcca 2252192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 3921187 - 3921289
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||| ||  ||||||||| |||||||| |||  |||||||| |||| |||||||||||    
T  3921187 aatgttacatagacaccttttaattgcatacacccttgtacacccc-atatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 3921285  T
Q  230 tcca 233  Q
    ||||    
T  3921286 tcca 3921289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 39557457 - 39557559
Alignment:
Q  148 tttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtc 247  Q
    |||||||||||| | || |||||||| | ||| ||||||||| |||||||||||| ||||||||| ||||| ||||  |||||||| ||||  |||||||    
T  39557457 tttattctcatagatccatgtacacctc-atgtattaggaagagagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtc 39557555  T
Q  248 agat 251  Q
    ||||    
T  39557556 agat 39557559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 20073456 - 20073544
Alignment:
Q  148 tttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtg 237  Q
    |||||||||||||||| ||||| | | | ||| | ||||||| ||||||||||||| ||| |||| |||||||||||| |||||||||||    
T  20073456 tttattctcatacacctttgtaaatctc-atgaactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcagggtccacgtg 20073544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 16115250 - 16115296
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacac 172  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  16115250 gagtaatgatacatagacaccctttattctcatacactcttgtacac 16115296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 21370182 - 21370062
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||| ||||||||| ||||||| |   ||  | |||||||  |||||| ||||| ||||||||  |||| ||||||||||    
T  21370182 aatgttacataaacaccctttattttcatacacctttgtacatctt-atatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcgggg 21370084  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    |||||||||| || ||||||||    
T  21370083 tccacgtgaccacatgtcagat 21370062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 41470425 - 41470458
Alignment:
Q  218 gcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    ||||||||||||||||||||||||||||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagat 41470458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 251
Target Start/End: Complemental strand, 9603979 - 9603871
Alignment:
Q  142 acaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgacta 241  Q
    |||||||||||||||||||||| |||||||  |||| ||| || |||| ||||||| || |  |||||||| ||||| ||||  ||||||||  |||| |    
T  9603979 acaccatttattctcatacacctttgtaca-tcccaagcactaagaagagagaagacgaaatgaaagagaaagtgtgattgtatggggtccatatgacca 9603881  T
Q  242 cgtgtcagat 251  Q
     |||||||||    
T  9603880 tgtgtcagat 9603871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 126 - 251
Target Start/End: Complemental strand, 4211 - 4087
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||||| |||    
T  4211 gagtaatgatacatagacaccatttattcccatacacccttgtacacccc-atgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgc 4113  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    ||| ||||||| ||||||||||||||    
T  4112 gggatccacgtaactacgtgtcagat 4087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 10027 - 10151
Alignment:
Q  126 gagtaatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgc 225  Q
    ||||||||||||||| |||||  |||||  |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||||| |    
T  10027 gagtaatgatacatagacacccattatttccatacacccttgtacaccct-atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtac 10125  T
Q  226 ggggtccacgtgactacgtgtcagat 251  Q
    | ||||||||||||||||||||||||    
T  10126 gcggtccacgtgactacgtgtcagat 10151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 249
Target Start/End: Original strand, 851 - 969
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||| ||||||| |||||||||||| ||||| ||||||| ||||||||||||| |||||||| |||||||||||||||     
T  851 aatgttacataaacaccctttattcccatacactcttgtacacccc-atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcggga 949  T
Q  230 tccacgtgactacgtgtcag 249  Q
    | ||||||||||||||||||    
T  950 ttcacgtgactacgtgtcag 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 249
Target Start/End: Original strand, 851 - 969
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| ||||||| ||||||| |||||||||||| ||||| ||||||| ||||||||||||| |||||||| |||||||||||||||     
T  851 aatgttacataaacaccctttattcccatacactcttgtacacccc-atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcggga 949  T
Q  230 tccacgtgactacgtgtcag 249  Q
    | ||||||||||||||||||    
T  950 ttcacgtgactacgtgtcag 969  T

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Target: scaffold0110 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 8785 - 8902
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||||||| ||||||||||||||||||| ||  ||||||||| ||||||| | ||| ||||||||  ||| |||||| ||||    
T  8785 aatgttacatagacaccttttattcttatacacccttgtacacccc-atatattaggaagagagaagatgggaggaaagagaaaatgtacttgtgtgggg 8883  T
Q  230 tccacgtgactacgtgtca 248  Q
    |||||||||||| ||||||    
T  8884 tccacgtgactatgtgtca 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 251
Target Start/End: Complemental strand, 152676 - 152556
Alignment:
Q  130 aatgatacatatacaccatttattctcatacacccttgtacacccccatgcattaggaagggagaagaggagagaaaagagaatgtgtgcttgtgcgggg 229  Q
    |||| |||||| ||||| |||| |  ||||||||||||||||  |||||| ||||| ||| |||||||| |||  |||||||| ||||  |||||||||     
T  152676 aatgttacatagacaccttttaattgcatacacccttgtaca-tcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcggga 152578  T
Q  230 tccacgtgactacgtgtcagat 251  Q
    ||||  |||| || ||||||||    
T  152577 tccatatgaccacatgtcagat 152556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 17168 - 17112
Alignment:
Q  195 agaggagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagat 251  Q
    |||| |||| ||||||||  ||||||||||||||||||| ||||| || ||||||||    
T  17168 agagaagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagat 17112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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