View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0227_low_25 (Length: 206)
Name: NF0227_low_25
Description: NF0227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0227_low_25 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 6352053 - 6351924
Alignment:
| Q |
24 |
ggtaaatcacatcgattacatactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccctactcctgagccat |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6352053 |
ggtaaatcacatcgattacatactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccctactcctgagccat |
6351954 |
T |
|
| Q |
124 |
cacattttagctacacctttgtatattctt |
153 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |
|
|
| T |
6351953 |
cacattttagttacacctttgtatattctt |
6351924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 1947 times since January 2019
Visitors: 2394