View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0230_low_4 (Length: 311)
Name: NF0230_low_4
Description: NF0230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0230_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 105 - 292
Target Start/End: Original strand, 9973651 - 9973838
Alignment:
| Q |
105 |
actgagatacagaaagaacaaaaatataaaagatttattagcaatgcttgtgctggcaagttaccatttttggttttggccatacttcttggtgtgcact |
204 |
Q |
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| T |
9973651 |
actgagatacagaaagaacaaaaatataaaagatttattagcaatgcttgtgctggcaagttaccatttttggttttggccatacttcttggtgtgctct |
9973750 |
T |
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| Q |
205 |
actcaattatcttatcttgaattcttataatgctcattaacattatcttggtcgttttcactctttccacaatgttgatattcttgga |
292 |
Q |
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| T |
9973751 |
actcaattatcttatcttgaattcttataatactcattaacattatcttggtcgttttcactctttccacaatgttgatattattgga |
9973838 |
T |
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