View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0231-INSERTION-4 (Length: 322)

Name: NF0231-INSERTION-4
Description: NF0231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0231-INSERTION-4
NF0231-INSERTION-4
[»] chr1 (39 HSPs)
chr1 (20-138)||(44999315-44999433)
chr1 (251-322)||(45299315-45299386)
chr1 (254-322)||(8251149-8251217)
chr1 (254-322)||(10100513-10100581)
chr1 (253-322)||(10124108-10124177)
chr1 (254-322)||(5606391-5606459)
chr1 (254-322)||(52749281-52749349)
chr1 (254-322)||(6017449-6017517)
chr1 (252-322)||(1821628-1821698)
chr1 (260-322)||(26543874-26543936)
chr1 (254-322)||(5945765-5945833)
chr1 (254-322)||(7075330-7075398)
chr1 (254-322)||(41855721-41855789)
chr1 (254-322)||(44240519-44240587)
chr1 (31-133)||(48527690-48527790)
chr1 (252-322)||(8048748-8048818)
chr1 (31-151)||(16964967-16965085)
chr1 (254-322)||(28490160-28490228)
chr1 (254-322)||(29253479-29253547)
chr1 (254-322)||(31932178-31932246)
chr1 (254-322)||(41414203-41414271)
chr1 (256-322)||(44452197-44452263)
chr1 (269-322)||(48389081-48389134)
chr1 (263-307)||(31651916-31651960)
chr1 (254-309)||(12685911-12685966)
chr1 (20-144)||(35943295-35943418)
chr1 (254-322)||(2126652-2126720)
chr1 (269-317)||(36035701-36035749)
chr1 (254-322)||(50014561-50014629)
chr1 (31-66)||(9482611-9482646)
chr1 (31-86)||(12665946-12666001)
chr1 (267-322)||(44741356-44741411)
chr1 (254-313)||(48312029-48312087)
chr1 (44-134)||(5612943-5613032)
chr1 (284-322)||(33730194-33730232)
chr1 (260-317)||(40883417-40883474)
chr1 (284-317)||(52688559-52688592)
chr1 (44-92)||(13894782-13894830)
chr1 (254-322)||(43453165-43453233)
[»] chr4 (45 HSPs)
chr4 (254-322)||(10384848-10384916)
chr4 (252-322)||(31152659-31152729)
chr4 (254-322)||(37667769-37667837)
chr4 (254-322)||(40411604-40411672)
chr4 (254-322)||(55631870-55631938)
chr4 (252-322)||(46608211-46608281)
chr4 (253-322)||(48380472-48380541)
chr4 (254-322)||(43447165-43447233)
chr4 (254-317)||(3708253-3708316)
chr4 (259-322)||(39170963-39171026)
chr4 (253-317)||(8525416-8525480)
chr4 (254-322)||(39332825-39332893)
chr4 (31-151)||(44498617-44498736)
chr4 (252-322)||(31657351-31657421)
chr4 (20-151)||(2312323-2312451)
chr4 (252-317)||(6520433-6520498)
chr4 (254-322)||(43047387-43047455)
chr4 (22-151)||(7707737-7707864)
chr4 (256-317)||(48336428-48336489)
chr4 (31-135)||(56085503-56085605)
chr4 (254-322)||(1377503-1377571)
chr4 (254-322)||(28899066-28899134)
chr4 (254-322)||(28914368-28914436)
chr4 (260-322)||(1613213-1613275)
chr4 (252-322)||(33394075-33394145)
chr4 (31-136)||(36845566-36845669)
chr4 (252-322)||(42185272-42185342)
chr4 (252-317)||(39376872-39376937)
chr4 (254-322)||(24334376-24334444)
chr4 (44-136)||(38555134-38555226)
chr4 (254-317)||(23605902-23605965)
chr4 (20-114)||(1794558-1794651)
chr4 (254-304)||(44210149-44210199)
chr4 (44-136)||(1519979-1520070)
chr4 (252-320)||(4860075-4860142)
chr4 (20-92)||(13165640-13165712)
chr4 (20-112)||(27850816-27850908)
chr4 (254-322)||(28988389-28988457)
chr4 (254-322)||(29821050-29821118)
chr4 (44-151)||(19750135-19750241)
chr4 (44-151)||(19789565-19789671)
chr4 (31-136)||(26629946-26630049)
chr4 (19-76)||(11968656-11968713)
chr4 (31-136)||(52138648-52138753)
chr4 (103-151)||(23202075-23202123)
[»] chr6 (33 HSPs)
chr6 (252-322)||(24798546-24798616)
chr6 (254-322)||(2397770-2397838)
chr6 (254-322)||(17496318-17496386)
chr6 (254-322)||(29795451-29795519)
chr6 (254-317)||(2667330-2667393)
chr6 (254-322)||(32541477-32541545)
chr6 (254-317)||(2656675-2656738)
chr6 (252-322)||(9022838-9022908)
chr6 (254-322)||(28483037-28483106)
chr6 (252-317)||(24949533-24949598)
chr6 (31-150)||(29381572-29381689)
chr6 (254-322)||(30699261-30699329)
chr6 (254-317)||(6142512-6142575)
chr6 (31-151)||(18346592-18346709)
chr6 (252-317)||(995561-995626)
chr6 (256-317)||(29515031-29515092)
chr6 (31-150)||(17837773-17837890)
chr6 (35-135)||(23392375-23392475)
chr6 (254-322)||(24825165-24825233)
chr6 (254-317)||(2141568-2141631)
chr6 (254-317)||(6188661-6188724)
chr6 (254-317)||(16661607-16661670)
chr6 (250-322)||(4890126-4890198)
chr6 (259-322)||(13358514-13358577)
chr6 (254-317)||(31708893-31708956)
chr6 (253-322)||(35117279-35117348)
chr6 (254-317)||(10109416-10109478)
chr6 (36-93)||(7312182-7312238)
chr6 (261-322)||(10105818-10105879)
chr6 (254-322)||(16969377-16969446)
chr6 (31-83)||(7311632-7311684)
chr6 (44-136)||(11722955-11723046)
chr6 (254-322)||(31948641-31948709)
[»] chr3 (53 HSPs)
chr3 (252-322)||(9484594-9484664)
chr3 (252-322)||(29793369-29793439)
chr3 (253-322)||(42098618-42098687)
chr3 (254-322)||(49076417-49076485)
chr3 (253-317)||(901084-901148)
chr3 (254-322)||(12948040-12948108)
chr3 (254-322)||(16434848-16434916)
chr3 (254-322)||(34263695-34263763)
chr3 (254-317)||(29720395-29720458)
chr3 (20-151)||(35371053-35371183)
chr3 (252-322)||(34555149-34555219)
chr3 (254-322)||(29455699-29455767)
chr3 (254-322)||(48927793-48927861)
chr3 (254-322)||(50673677-50673745)
chr3 (254-313)||(46866343-46866402)
chr3 (259-317)||(34669613-34669671)
chr3 (253-313)||(53274995-53275055)
chr3 (256-315)||(14751040-14751099)
chr3 (31-151)||(26886429-26886547)
chr3 (253-318)||(44781978-44782043)
chr3 (254-322)||(38833956-38834024)
chr3 (252-322)||(2643260-2643330)
chr3 (31-151)||(41264494-41264612)
chr3 (252-316)||(29809343-29809407)
chr3 (254-317)||(36179132-36179195)
chr3 (259-322)||(38878469-38878532)
chr3 (252-322)||(1778359-1778429)
chr3 (254-317)||(4229184-4229247)
chr3 (254-317)||(18013466-18013529)
chr3 (20-85)||(14745106-14745171)
chr3 (254-322)||(36364754-36364820)
chr3 (254-322)||(4945842-4945910)
chr3 (254-322)||(28958990-28959058)
chr3 (31-115)||(42685032-42685115)
chr3 (255-311)||(53055627-53055683)
chr3 (20-151)||(3208630-3208759)
chr3 (257-322)||(1334286-1334351)
chr3 (106-151)||(27841549-27841594)
chr3 (31-151)||(34819126-34819244)
chr3 (276-317)||(43370313-43370354)
chr3 (44-112)||(20314644-20314711)
chr3 (254-322)||(32961246-32961314)
chr3 (44-151)||(46368977-46369081)
chr3 (254-317)||(4464881-4464944)
chr3 (254-317)||(47069406-47069469)
chr3 (31-85)||(48083383-48083437)
chr3 (252-322)||(52094085-52094155)
chr3 (257-322)||(49818760-49818825)
chr3 (261-322)||(50035077-50035138)
chr3 (44-145)||(53624210-53624309)
chr3 (254-310)||(28229048-28229104)
chr3 (250-282)||(29728331-29728363)
chr3 (44-132)||(37415164-37415252)
[»] scaffold0221 (1 HSPs)
scaffold0221 (254-322)||(5376-5444)
[»] chr5 (43 HSPs)
chr5 (254-322)||(1098175-1098243)
chr5 (20-151)||(30859011-30859141)
chr5 (253-322)||(20040411-20040480)
chr5 (254-322)||(1781141-1781209)
chr5 (254-316)||(40316818-40316880)
chr5 (254-316)||(41410661-41410723)
chr5 (254-322)||(14633007-14633075)
chr5 (254-322)||(19344695-19344763)
chr5 (254-322)||(31191173-31191241)
chr5 (254-316)||(1831351-1831413)
chr5 (253-322)||(13548212-13548281)
chr5 (257-317)||(14057711-14057771)
chr5 (254-322)||(20022860-20022928)
chr5 (22-136)||(1102765-1102877)
chr5 (260-322)||(30211737-30211799)
chr5 (257-322)||(14607553-14607618)
chr5 (253-322)||(30721681-30721750)
chr5 (56-151)||(36898819-36898916)
chr5 (254-322)||(41263125-41263193)
chr5 (254-317)||(27675540-27675603)
chr5 (261-322)||(8627142-8627203)
chr5 (31-151)||(22047890-22048010)
chr5 (31-151)||(22308640-22308759)
chr5 (20-151)||(30910888-30911017)
chr5 (254-317)||(33402592-33402655)
chr5 (20-92)||(11262538-11262610)
chr5 (254-322)||(30788205-30788273)
chr5 (252-322)||(9936884-9936954)
chr5 (252-322)||(40079979-40080049)
chr5 (25-151)||(4127089-4127219)
chr5 (32-151)||(9220300-9220416)
chr5 (253-322)||(10465291-10465360)
chr5 (261-322)||(34347474-34347535)
chr5 (261-317)||(2799638-2799694)
chr5 (252-322)||(2551623-2551693)
chr5 (265-322)||(41042833-41042890)
chr5 (284-320)||(967222-967258)
chr5 (31-151)||(13520640-13520759)
chr5 (254-322)||(39925203-39925271)
chr5 (254-317)||(32110673-32110736)
chr5 (271-317)||(2805814-2805860)
chr5 (257-322)||(34169832-34169897)
chr5 (70-150)||(33172743-33172823)
[»] chr7 (37 HSPs)
chr7 (251-322)||(38069048-38069119)
chr7 (252-317)||(36819614-36819679)
chr7 (254-322)||(16807142-16807210)
chr7 (254-316)||(35693832-35693894)
chr7 (254-322)||(30462217-30462285)
chr7 (20-151)||(32255136-32255264)
chr7 (254-322)||(25274013-25274081)
chr7 (254-322)||(37101022-37101090)
chr7 (31-141)||(44372885-44372994)
chr7 (31-141)||(44381741-44381850)
chr7 (254-322)||(40231928-40231996)
chr7 (44-151)||(22537729-22537832)
chr7 (252-322)||(32972323-32972393)
chr7 (254-312)||(35265823-35265881)
chr7 (31-151)||(13564080-13564198)
chr7 (44-136)||(48312209-48312300)
chr7 (20-85)||(35295844-35295909)
chr7 (254-322)||(46242476-46242544)
chr7 (257-317)||(47713433-47713493)
chr7 (31-86)||(43460727-43460782)
chr7 (260-322)||(38850708-38850770)
chr7 (261-315)||(40818700-40818754)
chr7 (44-135)||(16756040-16756128)
chr7 (253-322)||(28016115-28016183)
chr7 (254-322)||(9173332-9173400)
chr7 (254-317)||(18756599-18756662)
chr7 (252-319)||(32222548-32222615)
chr7 (284-322)||(4620097-4620135)
chr7 (254-308)||(39982117-39982171)
chr7 (31-136)||(43441502-43441605)
chr7 (44-135)||(47059278-47059371)
chr7 (44-134)||(47060334-47060423)
chr7 (284-317)||(31496646-31496679)
chr7 (106-151)||(46835906-46835951)
chr7 (252-308)||(9136672-9136728)
chr7 (252-304)||(19327328-19327380)
chr7 (254-322)||(42493517-42493585)
[»] chr2 (37 HSPs)
chr2 (256-322)||(7724606-7724672)
chr2 (253-322)||(12208988-12209057)
chr2 (256-317)||(31603416-31603477)
chr2 (254-322)||(8373434-8373502)
chr2 (255-317)||(16127780-16127842)
chr2 (253-322)||(16126077-16126146)
chr2 (253-322)||(16333479-16333548)
chr2 (254-313)||(40471736-40471795)
chr2 (254-317)||(41575562-41575625)
chr2 (252-322)||(38963793-38963863)
chr2 (253-313)||(5096247-5096307)
chr2 (20-151)||(18616846-18616975)
chr2 (251-322)||(10333573-10333644)
chr2 (254-322)||(8896271-8896339)
chr2 (265-317)||(11277562-11277614)
chr2 (254-322)||(41436832-41436900)
chr2 (254-309)||(4137410-4137465)
chr2 (20-151)||(29219532-29219660)
chr2 (20-151)||(29332831-29332959)
chr2 (254-307)||(37316876-37316929)
chr2 (254-314)||(6730106-6730166)
chr2 (253-317)||(20682653-20682717)
chr2 (254-322)||(22718538-22718606)
chr2 (252-322)||(18504470-18504540)
chr2 (271-317)||(37987936-37987982)
chr2 (254-322)||(2831707-2831775)
chr2 (31-150)||(34467662-34467782)
chr2 (254-314)||(45036363-45036423)
chr2 (78-145)||(7436668-7436735)
chr2 (252-322)||(16646244-16646314)
chr2 (31-93)||(42641758-42641820)
chr2 (283-317)||(44022297-44022331)
chr2 (31-132)||(8320913-8321013)
chr2 (254-322)||(6075125-6075193)
chr2 (253-309)||(25762193-25762249)
chr2 (253-309)||(25766443-25766499)
chr2 (31-83)||(32469306-32469358)
[»] chr8 (41 HSPs)
chr8 (253-322)||(30464431-30464500)
chr8 (23-151)||(32695116-32695241)
chr8 (254-322)||(23437806-23437874)
chr8 (250-317)||(14378684-14378751)
chr8 (22-151)||(17455194-17455321)
chr8 (253-322)||(761549-761618)
chr8 (253-322)||(25691590-25691659)
chr8 (254-317)||(4327117-4327180)
chr8 (254-317)||(28583301-28583364)
chr8 (31-141)||(20180525-20180634)
chr8 (252-322)||(25009142-25009212)
chr8 (253-317)||(3466282-3466346)
chr8 (254-322)||(37094132-37094200)
chr8 (254-322)||(44887708-44887776)
chr8 (253-317)||(38842161-38842226)
chr8 (253-322)||(43184772-43184841)
chr8 (20-151)||(24192504-24192634)
chr8 (253-322)||(11756775-11756844)
chr8 (252-317)||(23547066-23547131)
chr8 (254-322)||(5777547-5777615)
chr8 (35-135)||(6397942-6398041)
chr8 (254-322)||(20671256-20671324)
chr8 (251-322)||(8496879-8496950)
chr8 (254-317)||(40645609-40645672)
chr8 (254-322)||(4960151-4960219)
chr8 (254-317)||(15870175-15870238)
chr8 (31-86)||(32798436-32798491)
chr8 (20-135)||(42870960-42871074)
chr8 (254-317)||(44717296-44717359)
chr8 (254-322)||(44361921-44361989)
chr8 (254-317)||(44947018-44947080)
chr8 (284-322)||(21132921-21132959)
chr8 (31-136)||(31845652-31845755)
chr8 (252-313)||(8123653-8123714)
chr8 (31-92)||(9854778-9854839)
chr8 (261-322)||(43049262-43049323)
chr8 (44-85)||(44076267-44076308)
chr8 (63-150)||(8571457-8571544)
chr8 (254-322)||(12893721-12893789)
chr8 (253-317)||(17523804-17523868)
chr8 (254-322)||(30653360-30653428)
[»] scaffold0001 (1 HSPs)
scaffold0001 (254-322)||(183966-184034)
[»] scaffold0281 (1 HSPs)
scaffold0281 (254-322)||(13104-13172)
[»] scaffold2071 (1 HSPs)
scaffold2071 (19-114)||(559-653)
[»] scaffold0204 (1 HSPs)
scaffold0204 (256-317)||(23950-24011)
[»] scaffold0118 (1 HSPs)
scaffold0118 (20-151)||(43416-43544)
[»] scaffold0500 (1 HSPs)
scaffold0500 (254-322)||(671-739)
[»] scaffold0077 (1 HSPs)
scaffold0077 (20-151)||(54025-54154)
[»] scaffold0031 (1 HSPs)
scaffold0031 (19-114)||(125108-125203)
[»] scaffold0283 (1 HSPs)
scaffold0283 (254-317)||(2996-3058)
[»] scaffold0069 (1 HSPs)
scaffold0069 (254-313)||(4441-4500)
[»] scaffold0289 (1 HSPs)
scaffold0289 (284-317)||(9165-9198)


Alignment Details
Target: chr1 (Bit Score: 111; Significance: 5e-56; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 44999433 - 44999315
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44999433 tggaccaatcgtaagagtggttcaccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacgcaa 44999334  T
Q  120 gtctattatatcttacgat 138  Q
    |||||||||||||||||||    
T  44999333 gtctattatatcttacgat 44999315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 45299315 - 45299386
Alignment:
Q  251 cattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45299315 cattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 45299386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 8251217 - 8251149
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  8251217 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgatctaacttactttgacca 8251149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 10100581 - 10100513
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  10100581 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgacca 10100513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 10124108 - 10124177
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10124108 ttactccatccatcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 10124177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 5606459 - 5606391
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  5606459 tactccctccgtcccgcaataaatgacctatttgaaaaagtgcaattttgatctaacttactttaacca 5606391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 52749281 - 52749349
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  52749281 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaatttttacctaacttattttgacca 52749349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 6017517 - 6017449
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  6017517 tacttcctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttgacca 6017449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 1821698 - 1821628
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| |||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  1821698 attactccctccgtccggcaatagatggcctatttgaaaatgtgcaattttgacctaacttactttgacca 1821628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 26543874 - 26543936
Alignment:
Q  260 ctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  26543874 ctccgtcccgcaataaatgatctgtttgaaaatgtacaattttgacctaacttactttgacca 26543936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 5945765 - 5945833
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||| ||||||||    
T  5945765 tactctctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacataatttattttaacca 5945833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 7075398 - 7075330
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||| |||||||||||||||| |||||||||| |||||||||||| |||||||||||| ||||    
T  7075398 tactccctccatcccgcaataaatgacttgtttgaaaacgtgcaattttgatctaacttactttgacca 7075330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 41855789 - 41855721
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||| ||||    
T  41855789 tactccctccgtcccgtaataaatgacctatttgaaaatttgcaattttgacctagcttactttgacca 41855721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 44240519 - 44240587
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||| ||||    
T  44240519 tactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgacca 44240587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 48527690 - 48527790
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||||||| ||||||||||| ||||||  ||||||||  |||||| ||| ||||||||||||||||  ||||| |||| |||    
T  48527690 taagagtggtccaccatagatcttatcaattattttaatttaaactgtttgatct--tttttttaaatgatgaccattggattatgcaagtgtattttat 48527787  T
Q  131 ctt 133  Q
    |||    
T  48527788 ctt 48527790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 8048818 - 8048748
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||| |||| ||| ||||    
T  8048818 attactccctccgtcctgcaatagatgacctatttgaaaatttgcaattttgacctagcttattttgacca 8048748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 16965085 - 16964967
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||||||||||||| || |||| |||| | ||  ||||  ||||||  ||||||| ||||| || ||||||| |||    
T  16965085 taagagtggtccaccatagatcctattaattattttaatttcaaccgtttgttttttctttt--aaaagagaaccattgtattacgcaggtctattttat 16964988  T
Q  131 cttacgatgtaccaccaacac 151  Q
     ||||||||||||||||||||    
T  16964987 attacgatgtaccaccaacac 16964967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 28490160 - 28490228
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||  ||||||| ||||    
T  28490160 tactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacatagtttactttgacca 28490228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 29253479 - 29253547
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| |||||||||||||| |||| || ||||||||| ||||||||||||||| |||||||| ||||    
T  29253479 tactccatccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagcttactttgacca 29253547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 31932246 - 31932178
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||| |||| || ||||||||| |||||||||||||||  ||||||| ||||    
T  31932246 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagtttactttgacca 31932178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 41414203 - 41414271
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||| |||||| || |||| ||||||||| ||||||||||||||| |||||||| ||||    
T  41414203 tactccctccgtcctgcaatagattacctatttgaaaatttgcaattttgacctagcttactttgacca 41414271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 44452197 - 44452263
Alignment:
Q  256 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||| ||||||||||| ||| ||  |||||||||||| ||||||||||||||||||||| ||||    
T  44452197 ctccctctgtcccgcaatagatgtcccatttgaaaatgtgtaattttgacctaacttactttgacca 44452263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 48389081 - 48389134
Alignment:
Q  269 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||    
T  48389081 gcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgacca 48389134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 31651960 - 31651916
Alignment:
Q  263 cgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacct 307  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  31651960 cgtcccgcaataaatgacctatttgaaaatgtgcaattttaacct 31651916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 12685966 - 12685911
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaa 309  Q
    |||||||| ||||||| |||| |||||| |||||||||||||||||||||| ||||    
T  12685966 tactcccttcgtcccgtaatagatgacccgtttgaaaatgtgcaattttgatctaa 12685911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 35943418 - 35943295
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaa-ccatttgatcttgttttttcaaaagatgaccattggattacaca 118  Q
    |||||||| | |||||||| | | ||||||| |||||||| | |||||  ||||| || |||||||||  ||||| ||| ||||||||||| ||||| ||    
T  35943418 tggaccaaccttaagagtgatccaccatagaccttattaaattttttattttaaaaccgtttgatctt--tttttgaaaggatgaccattgaattacgca 35943321  T
Q  119 agtctattatatcttacgatgtacca 144  Q
     ||||||| |||||||||||| ||||    
T  35943320 ggtctattttatcttacgatgaacca 35943295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 2126652 - 2126720
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||| | |||||||| ||||| | ||| |||||||| ||||||||||||| ||||||| ||||    
T  2126652 tactccctccattccgcaatagatgacttatttaaaaatgtgtaattttgacctaatttactttgacca 2126720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 36035701 - 36035749
Alignment:
Q  269 gcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||||| |||||||| |||||||| |||| |||||||    
T  36035701 gcaataaatgacctgtttaaaaatgtgtaattttgatctaatttacttt 36035749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 50014629 - 50014561
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||  ||| ||||| | ||||||||| ||||||||||| ||| |||||||| ||||    
T  50014629 tactccctccgtcccgtcatagatgacttatttgaaaatttgcaattttgatctagcttactttgacca 50014561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 9482611 - 9482646
Alignment:
Q  31 taagagtggttctccatagatcttattaattatttt 66  Q
    |||||||||||| |||||||||||||||||||||||    
T  9482611 taagagtggttcaccatagatcttattaattatttt 9482646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 12665946 - 12666001
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatctt 86  Q
    |||||||||| | |||||||||||||||||| | |||| ||||||| |||||||||    
T  12665946 taagagtggtccaccatagatcttattaattttgttaatttaaaccgtttgatctt 12666001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 44741356 - 44741411
Alignment:
Q  267 ccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||| | |||||| |||||||||||||| |||||||| ||| ||||    
T  44741356 ccgcaataaatgacatatttgaatatgtgcaattttgatctaacttattttgacca 44741411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 48312029 - 48312087
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 313  Q
    ||||||||| ||||||||||| ||||||  |||||||||||||||||||| | |||||||    
T  48312029 tactccctcagtcccgcaatagatgacca-tttgaaaatgtgcaattttggcttaactta 48312087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 5613032 - 5612943
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatctta 134  Q
    ||||||||| ||||||||||||||| ||||||| |||||| |   ||||| ||| |||||||||| ||||||  |||| |||| |||||||    
T  5613032 ccatagatcctattaattattttaatttaaaccgtttgat-tatatttttaaaaggatgaccattagattacgtaagtgtattttatctta 5612943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 33730232 - 33730194
Alignment:
Q  284 tttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  33730232 tttgaaaatgtgtaattttgacataacttactttaacca 33730194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 40883417 - 40883474
Alignment:
Q  260 ctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||| |||||||||| |||| |  ||| |||||||| |||||||||||||||||||||    
T  40883417 ctccatcccgcaatagatgatccatttaaaaatgtgaaattttgacctaacttacttt 40883474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 317
Target Start/End: Original strand, 52688559 - 52688592
Alignment:
Q  284 tttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||| |||||||||||||||||||||    
T  52688559 tttgaaaatgtggaattttgacctaacttacttt 52688592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 13894782 - 13894830
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttt 92  Q
    ||||||||| | ||||||||||||| ||||||| ||||||||| |||||    
T  13894782 ccatagatcctgttaattattttaatttaaaccgtttgatctttttttt 13894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 43453233 - 43453165
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||| || |||||   |||| | ||||| ||||||||||||||||| ||| ||||    
T  43453233 tactccctccgtcccgcattagatgactcatttgcagatgtgtaattttgacctaacttattttgacca 43453165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 10384848 - 10384916
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10384848 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 10384916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 31152659 - 31152729
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31152659 attactccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 31152729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 37667837 - 37667769
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  37667837 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgacca 37667769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 40411672 - 40411604
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40411672 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 40411604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 55631938 - 55631870
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  55631938 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgacca 55631870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 46608211 - 46608281
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  46608211 attacttcctccgtcccgcaataaatgacctgtttgaaaatgtgaaattttgacctaacttactttgacca 46608281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 48380472 - 48380541
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  48380472 ttactccctccgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgacca 48380541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 43447165 - 43447233
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  43447165 tactccctccgtcccgtaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgacca 43447233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 3708253 - 3708316
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  3708253 tactccctccgtcccacaataaatgatctgtttgaaaatgtgcaattttgacctaacttacttt 3708316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 39170963 - 39171026
Alignment:
Q  259 cctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  39170963 cctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgacca 39171026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 8525480 - 8525416
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  8525480 ttactccctccgtcccataataaatgacctgtttgaaaatatgcaattttgacctaacttacttt 8525416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 39332893 - 39332825
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  39332893 tactccctccgtcacgcaataaatgatctgtttgaaaatgtgcaattttgaactaacttactttgacca 39332825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 44498617 - 44498736
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||||||||||||| | ||||| |||||| || ||| || |||||||||||||| |||||| || ||||||| |||    
T  44498617 taagagtggtccaccatagatcctattaattattttaattaaaaccgtttgattttttttctt-aaaagatgaccattagattacgcatgtctattttat 44498715  T
Q  131 cttacgatgtaccaccaacac 151  Q
    |||| |||||| |||||||||    
T  44498716 cttaggatgtatcaccaacac 44498736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 31657421 - 31657351
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||| ||||    
T  31657421 attactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgacca 31657351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 2312451 - 2312323
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||||| ||| |||||| | ||||||||| ||||||||||||||| ||||||  |||||| ||   |||| ||||||  |||||||||||| |||     
T  2312451 tggaccaatcttaaaagtggtccaccatagatcctattaattattttaatttaaactgtttgatttt---ttttaaaaagagaaccattggattagacag 2312355  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    | ||||| ||||||| ||||||||||||||||    
T  2312354 gcctattttatcttatgatgtaccaccaacac 2312323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 6520433 - 6520498
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  6520433 attactccatccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttacttt 6520498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 43047387 - 43047455
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  43047387 tacttcctccatcccgcaataaatgacttgtttgaaaatgtgcaattttaacctaacttactttgacca 43047455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 7707737 - 7707864
Alignment:
Q  22 gaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagt 121  Q
    |||||| | |||||||||| | ||||||||| ||||||||||||||| || |||| |||||  || ||| || ||||||  ||||||||||||  || ||    
T  7707737 gaccaaccttaagagtggtccaccatagatcctattaattattttaatttcaaccgtttga--ttttttctttaaaagagaaccattggattaggcaggt 7707834  T
Q  122 ctattatatcttacgatgtaccaccaacac 151  Q
    ||||| ||||||||||||||||| ||||||    
T  7707835 ctattttatcttacgatgtaccatcaacac 7707864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 48336489 - 48336428
Alignment:
Q  256 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||    
T  48336489 ctccctccgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttacttt 48336428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 56085503 - 56085605
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||||||||||||| ||||||| |||||  || |||||| ||| ||||||| |||||| ||||| || |||| |||    
T  56085503 taagagtggtccaccatagatcctattaattattttaatttaaaccgtttga--tttttttttaaaaggatgaccgttggatcacacatgtgtattttat 56085600  T
Q  131 cttac 135  Q
    |||||    
T  56085601 cttac 56085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 1377503 - 1377571
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||  ||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||| ||||    
T  1377503 tactccctttgtcccgcaataaacgacctatttgaaaatttgcaattttgacctatcttactttgacca 1377571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 28899134 - 28899066
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||| ||||    
T  28899134 tactccctctgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgacca 28899066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 28914368 - 28914436
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||| ||||||||||| | |||||| ||||| | |||||||||||||||||||||| ||||    
T  28914368 tactccctccgttccgcaataaataaactgtttcaaaatttacaattttgacctaacttactttgacca 28914436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 1613275 - 1613213
Alignment:
Q  260 ctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||| |||| ||||||| |||||||||||| ||||||||||||| ||||||| ||||    
T  1613275 ctccgtcccgtaatagatgacctatttgaaaatgtgtaattttgacctaatttactttgacca 1613213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 33394075 - 33394145
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| |||||||||| |||||  |||||  ||| |||||||||||||||||||||||||||||| ||||    
T  33394075 attacttcctccgtcccacaataggtgacccatttaaaaatgtgcaattttgacctaacttactttgacca 33394145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 36845566 - 36845669
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | |||||| || |||||||||||||||  |||||  |||||| || |||||  ||||||||||||||||||||| || || |||| |||    
T  36845566 taagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatatttttttt--aaaagatgaccattggattacgcaggtgtattttat 36845663  T
Q  131 cttacg 136  Q
    ||||||    
T  36845664 cttacg 36845669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 42185272 - 42185342
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||| |||| |  ||||||||| |||||||||||||||| ||| ||| ||||    
T  42185272 attactccctccgtcccgcaatagatgatccatttgaaaatttgcaattttgacctaatttagtttgacca 42185342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 39376937 - 39376872
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||||| ||||| |  |||||||| |||||||||||||||  |||||||    
T  39376937 attactccctccgtcccgcaatagatgacttagttgaaaatttgcaattttgacctagtttacttt 39376872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 24334444 - 24334376
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||  ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||| ||||    
T  24334444 tactccctttgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgacca 24334376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 38555226 - 38555134
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacg 136  Q
    |||||||  ||||||| | |||||| ||||||| ||||||||| ||| || ||| ||  |||||||||||||||| ||||||| |||||||||    
T  38555226 ccatagactttattaaattttttaatttaaaccgtttgatcttttttatttaaaggagaaccattggattacacatgtctattttatcttacg 38555134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 23605965 - 23605902
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||| |||| ||||||||||||||| || ||||||||| | ||||||||||||| ||||||||    
T  23605965 tactctctccatcccgcaataaatgatctatttgaaaatttacaattttgacctagcttacttt 23605902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 1794558 - 1794651
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggatta 114  Q
    |||||||| | |||||||||| | ||||||| |||||||| | |||||| ||||||| |||||||   |||||| ||||||||||||||| ||||    
T  1794558 tggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatcaa-ttttttaaaaagatgaccattgaatta 1794651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 44210149 - 44210199
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttga 304  Q
    ||||||||||||||||||||||||||||| ||| ||| | |||||||||||    
T  44210149 tactccctccgtcccgcaataaatgacctatttaaaattttgcaattttga 44210199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 1519979 - 1520070
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacg 136  Q
    ||||||||| ||||||||||||||| ||||||| |||||| |   ||||| ||| |||||||||| ||||||  |||| |||| |||||||||    
T  1519979 ccatagatcctattaattattttaatttaaaccgtttgat-tatatttttaaaaggatgaccattagattacgtaagtgtattttatcttacg 1520070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 4860142 - 4860075
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaac 320  Q
    ||||||| ||||||||  ||||| ||||||| ||||||| |||||||| ||||||||| ||||||||||    
T  4860142 attactctctccgtcctacaatagatgacctatttgaaa-tgtgcaatattgacctaagttactttaac 4860075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 13165640 - 13165712
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttt 92  Q
    |||||||| | |||||||||| | |||||||  | |||||||||||||| ||||||| ||||||||| |||||    
T  13165640 tggaccaaccttaagagtggtccaccatagacttcattaattattttaatttaaaccgtttgatctttttttt 13165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 27850908 - 27850816
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggat 112  Q
    |||||||| | ||| |||||| | ||||||||| ||||||||||||||| ||||||| ||||||  | |||||| ||| || || ||||||||    
T  27850908 tggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaaaccgtttgattctttttttttaaaggaggatcattggat 27850816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 28988457 - 28988389
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||| ||||||||||| ||||||| ||||||||| || ||| ||||||||  ||||||| ||||    
T  28988457 tactccctcagtcccgcaatagatgacctatttgaaaatttgtaatgttgacctagtttactttgacca 28988389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 29821050 - 29821118
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| | ||||||| |||| |||| |  ||||||||||||||||||||| |||||||||||| ||||    
T  29821050 tactcctttcgtcccgtaatagatgatccatttgaaaatgtgcaattttgatctaacttactttgacca 29821118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 19750241 - 19750135
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacgatgtacc 143  Q
    ||||||||| ||||||||||||||| ||||| | ||||||||| |||||| ||| || ||   |||||| || || || |||| |||||||||||| |||    
T  19750241 ccatagatcctattaattattttaatttaaatcgtttgatctt-ttttttaaaaggaggattgttggatcacgcaggtgtattctatcttacgatgaacc 19750143  T
Q  144 accaacac 151  Q
    | ||||||    
T  19750142 atcaacac 19750135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 19789565 - 19789671
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacgatgtacc 143  Q
    ||||||||| ||||||||||||||| ||||| | ||||||||| |||||| ||| || ||   |||||| || || || |||| |||||||||||| |||    
T  19789565 ccatagatcctattaattattttaatttaaatcgtttgatctt-ttttttaaaaggaggattgttggatcacgcaggtgtattctatcttacgatgaacc 19789663  T
Q  144 accaacac 151  Q
    | ||||||    
T  19789664 atcaacac 19789671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 26629946 - 26630049
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | |||||| || |||||||||||||||  |||||  ||||||||  |||||| ||| |||||||||| ||||||  | || |||| |||    
T  26629946 taagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatct--tttttttaaaggatgaccattagattacgtaggtgtattttat 26630043  T
Q  131 cttacg 136  Q
    ||||||    
T  26630044 cttacg 26630049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 11968656 - 11968713
Alignment:
Q  19 atggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaacc 76  Q
    ||||||||| | |||||||||| |  |||||||| ||||||||||||||| |||||||    
T  11968656 atggaccaaccttaagagtggtccatcatagatcctattaattattttaatttaaacc 11968713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 52138753 - 52138648
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    ||||| |||| | ||||||||| ||||||||||| ||| ||||||| |||||| || |||||| ||| || |   |||||||||| || || |||| |||    
T  52138753 taagaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttttttaaaaggagggttattggattacgcatgtgtattttat 52138654  T
Q  131 cttacg 136  Q
    ||||||    
T  52138653 cttacg 52138648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 23202075 - 23202123
Alignment:
Q  103 accattggattacacaagtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| ||||  || ||||||| ||||||||||||||||||||||||    
T  23202075 accattgaattaagcaggtctattttatcttacgatgtaccaccaacac 23202123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 24798616 - 24798546
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24798616 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 24798546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 2397770 - 2397838
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  2397770 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgacca 2397838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 17496386 - 17496318
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  17496386 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgacca 17496318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 29795451 - 29795519
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29795451 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaacca 29795519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 2667393 - 2667330
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2667393 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttacttt 2667330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 32541545 - 32541477
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  32541545 tactccctccgtcccgcaataaatgacctgtttgaaaatatgcaattttgacctaatttactttgacca 32541477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 2656738 - 2656675
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2656738 tactccatccgtcccgcaataaatgagctgtttgaaaatgtgcaattttgacctaacttacttt 2656675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 9022838 - 9022908
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  9022838 attactccctccgtcctgcaataaatgacctgtttgaaaatatgcaattttgacctaacatactttgacca 9022908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 28483037 - 28483106
Alignment:
Q  254 tactccctcc-gtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  28483037 tactccctcccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaacca 28483106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 24949533 - 24949598
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||||||||||||    
T  24949533 attactccctccgtcccgcaatagatgacccatttgaaaatgtgcaattttgatctaacttacttt 24949598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 29381689 - 29381572
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||| | | ||||||||| ||||||||||||||| || |||| |||||| ||  ||||  ||||||| ||||||||||||  || ||||||| |||    
T  29381689 taagagtgatccaccatagatcctattaattattttaatttcaaccgtttgatttt--ttttcaaaaagataaccattggattaggcaggtctattttat 29381592  T
Q  131 cttacgatgtaccaccaaca 150  Q
    ||||||||||||||||||||    
T  29381591 cttacgatgtaccaccaaca 29381572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 30699261 - 30699329
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||| ||||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||    
T  30699261 tactccctccgttccgcaataaatgatctgtttaaaaatgtgtaattttgacctaacttactttgacca 30699329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 6142575 - 6142512
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  6142575 tactccatccgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttacttt 6142512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 18346709 - 18346592
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | | ||| ||| ||||||||||||||| ||||||| |||||| || ||||   |||||   ||||||||||||  |||||||||| |||    
T  18346709 taagagtggtccactataaatcctattaattattttaatttaaaccgtttgattttttttt---aaaagtaaaccattggattatgcaagtctattttat 18346613  T
Q  131 cttacgatgtaccaccaacac 151  Q
    |||||||||||||||||||||    
T  18346612 cttacgatgtaccaccaacac 18346592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 995561 - 995626
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||| |||||||||||| |||||||||||||| |||||||||| || |||||||    
T  995561 attactccctccgtcctgcaataaatgacatgtttgaaaatgtgtaattttgaccaaatttacttt 995626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 29515092 - 29515031
Alignment:
Q  256 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||  ||||| | |||||||||||||||||||||||||||||||||||||||    
T  29515092 ctccctccgtcccttaataagtaacctgtttgaaaatgtgcaattttgacctaacttacttt 29515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 17837773 - 17837890
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||||||||||||| || |||| |||||| ||  | ||  ||| ||| ||||||||||||  || ||||||| |||    
T  17837773 taagagtggtccaccatagatcctattaattattttaatttcaaccgtttgatttt--tcttaaaaacgataaccattggattaggcaggtctattttat 17837870  T
Q  131 cttacgatgtaccaccaaca 150  Q
    ||||||||||||||||||||    
T  17837871 cttacgatgtaccaccaaca 17837890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 23392375 - 23392475
Alignment:
Q  35 agtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatctta 134  Q
    |||||| | ||||||||| ||||||||||||||| || |||| |||||| || |||||| ||||||| |||||| |||||  |||||||||| |||||||    
T  23392375 agtggtccaccatagatcctattaattattttaatttcaaccgtttgatattttttttttaaaagataaccattagattatgcaagtctattttatctta 23392474  T
Q  135 c 135  Q
    |    
T  23392475 c 23392475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 24825165 - 24825233
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||   ||||| |||| |||||||||||||||||||||||||||||||||||| ||||    
T  24825165 tactccctccgtcctttaataagtgacatgtttgaaaatgtgcaattttgacctaacttactttgacca 24825233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 2141568 - 2141631
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||| ||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  2141568 tactccgtccgtcccttaataagtgacctgtttgaaaatgtacaattttgacctaacttacttt 2141631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 6188724 - 6188661
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||| ||||||||  ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6188724 tactccatccgtcccttaataagtgacatgtttgaaaatgtgcaattttgacctaacttacttt 6188661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 16661670 - 16661607
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||| ||||||||||| |||| |  |||||||||||| |||||||||||||||||||||    
T  16661670 tactccctcagtcccgcaatagatgatccatttgaaaatgtgtaattttgacctaacttacttt 16661607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 4890198 - 4890126
Alignment:
Q  250 tcattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||  |||||| |||| |  ||| |||||||||||||||||||||| ||||||| ||||    
T  4890198 tcattactccctccgtcatgcaatagatgatccatttaaaaatgtgcaattttgacctaatttactttgacca 4890126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 13358514 - 13358577
Alignment:
Q  259 cctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||| || ||||| ||||| | |||||||||||| ||||||||||||||||||||| ||||    
T  13358514 cctccgttccacaatagatgacttatttgaaaatgtgtaattttgacctaacttactttgacca 13358577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 31708893 - 31708956
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||| |||||| |||| || ||| |||||||||||||||||| ||| |||||||    
T  31708893 tactccctccgtcctgcaatagatgatctatttaaaaatgtgcaattttgacttaatttacttt 31708956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 35117279 - 35117348
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||| || ||||||||||  |||  ||||||||||||||||||| || ||||||||||| ||||    
T  35117279 ttactccctctgttccgcaataaagaacccatttgaaaatgtgcaattttaacataacttactttgacca 35117348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 10109478 - 10109416
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||| ||||||||| |||||| |||| |  ||| ||||||||||||||||||||||||||||||    
T  10109478 tacttcctccgtcc-gcaatagatgatccatttaaaaatgtgcaattttgacctaacttacttt 10109416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 7312238 - 7312182
Alignment:
Q  36 gtggttctccatagatcttattaattattttaacttaaaccatttgatcttgtttttt 93  Q
    ||||||| || ||||||||||||||| |||||| || |||||||||||||| ||||||    
T  7312238 gtggttcaccgtagatcttattaatt-ttttaatttcaaccatttgatcttttttttt 7312182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 10105818 - 10105879
Alignment:
Q  261 tccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||| ||||| |||||  |||| |||||| ||||||||||| ||||||| ||||||||    
T  10105818 tccgtcccacaatagatgactcgtttaaaaatgagcaattttgacttaacttattttaacca 10105879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 16969377 - 16969446
Alignment:
Q  254 tactccctccgtcccgcaataaatgacc-tgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||| |||||||||  ||||| ||||| | |||||||||||||||||||||| ||| ||||||| ||||    
T  16969377 tactctctccgtcccttaataagtgaccctatttgaaaatgtgcaattttgacttaatttactttgacca 16969446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 7311684 - 7311632
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgat 83  Q
    |||||||||| | ||||| ||| ||||||||||||||| ||||||| ||||||    
T  7311684 taagagtggtccaccataaatcctattaattattttaatttaaaccgtttgat 7311632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 11722955 - 11723046
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacg 136  Q
    ||||||||| ||||||||||| ||| ||||||| |||||| || |||||| ||| || |  |||||||||||||| || |||| | |||||||    
T  11722955 ccatagatcctattaattattctaatttaaaccgtttgat-tttttttttaaaaggagggtcattggattacacaggtgtattttctcttacg 11723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 31948709 - 31948641
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||| ||||||| |||| |  |||||||||||| |||| |||| ||||||| ||| ||||    
T  31948709 tactccctccgtctcgcaatagatgatccatttgaaaatgtgtaattatgacttaacttattttgacca 31948641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 9e-30; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 9484594 - 9484664
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9484594 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 9484664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 29793439 - 29793369
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29793439 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 29793369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 42098687 - 42098618
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42098687 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 42098618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 49076485 - 49076417
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49076485 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 49076417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 901148 - 901084
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  901148 ttactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttacttt 901084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 12948040 - 12948108
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  12948040 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgacca 12948108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 16434916 - 16434848
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  16434916 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgacca 16434848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 34263763 - 34263695
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  34263763 tactccctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgacctaacttactttgacca 34263695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 29720395 - 29720458
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29720395 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttacttt 29720458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 35371053 - 35371183
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||| | |||||||||| | ||||||||| ||||||||||||||| || |||  |||||| || |||||| ||||||  ||||||||||||  |||    
T  35371053 tggaccaaccttaagagtggtccaccatagatcctattaattattttaattttaactttttgatttt-ttttttaaaaagagaaccattggattaggcaa 35371151  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| ||||||||||||||||||||||||    
T  35371152 gtctattttatcttacgatgtaccaccaacac 35371183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 34555149 - 34555219
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  34555149 attactccctccgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgacca 34555219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 29455767 - 29455699
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29455767 tactccctccgtcctgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 29455699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 48927861 - 48927793
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  48927861 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaatttttacctaacttactttgacca 48927793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 50673677 - 50673745
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  50673677 tactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacttaacttactttgacca 50673745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 46866343 - 46866402
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 313  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46866343 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaactta 46866402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 34669613 - 34669671
Alignment:
Q  259 cctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34669613 cctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttacttt 34669671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 53275055 - 53274995
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 313  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53275055 ttactccttccgtcccgcaataaatgacctatttgaaaatgtgcaattttgacctaactta 53274995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 256 - 315
Target Start/End: Complemental strand, 14751099 - 14751040
Alignment:
Q  256 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttact 315  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14751099 ctccctccctcccgcaatagatgacctgtttgaaaatgtgcaattttgacctaacttact 14751040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 26886429 - 26886547
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||| ||| ||||||||||||||| ||||||| |||||| || |||||  |||||   ||||||||||||  || ||||||| |||    
T  26886429 taagagtggtccaccataaatcctattaattattttaatttaaaccgtttgatttttttttt--aaaagggaaccattggattatgcatgtctattttat 26886526  T
Q  131 cttacgatgtaccaccaacac 151  Q
    |||||||||||||||||||||    
T  26886527 cttacgatgtaccaccaacac 26886547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 44782043 - 44781978
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttta 318  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||    
T  44782043 ttactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgaactaacttacttta 44781978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 38834024 - 38833956
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||| |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  38834024 tacttcctctgtcccgcaataaatgacctgtttaaaaatgtgtaattttgacctaacttactttgacca 38833956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 2643330 - 2643260
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||| ||||    
T  2643330 attactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgacca 2643260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 41264612 - 41264494
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||||||||||||| ||  ||| |||||| ||  ||||| ||||||  ||||||| ||||  || ||||||| |||    
T  41264612 taagagtggtacaccatagatcctattaattattttaatttcgaccgtttgatttt--tttttaaaaagagaaccattgaattaagcaggtctattttat 41264515  T
Q  131 cttacgatgtaccaccaacac 151  Q
    |||||||||||||||||||||    
T  41264514 cttacgatgtaccaccaacac 41264494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 29809343 - 29809407
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 316  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| |||||||    
T  29809343 attactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgatctagcttactt 29809407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 36179195 - 36179132
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  36179195 tactctctccgtcccacaataaataacctgtttgaaaatgtgcaattttgacttaatttacttt 36179132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 38878532 - 38878469
Alignment:
Q  259 cctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||| ||||    
T  38878532 cctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacataaattattttgacca 38878469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 1778359 - 1778429
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| |||||||||||||||| ||||||| ||||||||| |||||||||||| || |||||||| ||||    
T  1778359 attacttcctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacttagcttactttgacca 1778429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 4229247 - 4229184
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||| ||| |||||||||||| | ||||||||| ||||||||||||||| ||||||||    
T  4229247 tactccctccatcctgcaataaatgacttatttgaaaatttgcaattttgacctagcttacttt 4229184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 18013529 - 18013466
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||| |||| ||||||  |||||||||||||||||||||| ||| |||||||    
T  18013529 tactccctccgtcccgtaatagatgacccatttgaaaatgtgcaattttgacataatttacttt 18013466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 14745171 - 14745106
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatct 85  Q
    |||||||| | |||||||||||| ||||||||| ||||||||||||||| ||||||  ||||||||    
T  14745171 tggaccaaccttaagagtggttcaccatagatcctattaattattttaatttaaactgtttgatct 14745106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 36364820 - 36364754
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||| ||||||||||||||| |||| ||||||||  |||||||||||||||||||| ||| ||||    
T  36364820 tactcccttcgtcccgcaataaataacctatttgaaaa--tgcaattttgacctaacttattttgacca 36364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 4945910 - 4945842
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||| | ||| ||||| | ||||| ||| |||||||||||||||||||||||| ||||    
T  4945910 tactccctccgtcccaccatagatgacgtatttgagaatttgcaattttgacctaacttactttgacca 4945842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 28959058 - 28958990
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||| ||||||| |||| || ||| ||||| ||||||||||||||| |||||||| ||||    
T  28959058 tactccctccgtctcgcaatagatgatctatttaaaaatttgcaattttgacctagcttactttgacca 28958990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 42685032 - 42685115
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattac 115  Q
    |||||||||| | ||||| | |||||||| | |||||| ||||||| |||||||| ||||||| ||||||||||||||| |||||    
T  42685032 taagagtggtccaccataaaccttattaaattttttaatttaaaccgtttgatct-gttttttaaaaagatgaccattgaattac 42685115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 53055683 - 53055627
Alignment:
Q  255 actccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaact 311  Q
    |||||||||||||  ||||||||||||  |||||||||||| |||||||||||||||    
T  53055683 actccctccgtcctacaataaatgaccaatttgaaaatgtgtaattttgacctaact 53055627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 3208630 - 3208759
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||| | |||||||||| | ||||| ||| ||||||||||| ||| ||||||| |||||| || |||||  |||| |  |||||||||| |  |||    
T  3208630 tggaccaaccttaagagtggtccaccataaatcctattaattattataatttaaaccgtttgattttattttta-aaaatagaaccattggat-aggcaa 3208727  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||| | ||||||||||||||||| ||||||    
T  3208728 gtctaatttatcttacgatgtaccatcaacac 3208759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 1334351 - 1334286
Alignment:
Q  257 tccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||| |||||||| ||||||  |||||||||||| |||||||| |||||||| ||| ||||    
T  1334351 tccctccgttccgcaatagatgacccatttgaaaatgtgtaattttgatctaacttaattttacca 1334286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 27841594 - 27841549
Alignment:
Q  106 attggattacacaagtctattatatcttacgatgtaccaccaacac 151  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||    
T  27841594 attggattaggcaagtctattttatcttacgatgtaccaccaacac 27841549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 34819244 - 34819126
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||| ||||||||| ||||||  |||| | || || |   ||||||  ||||||||||||  |||||||||| |||    
T  34819244 taagagtggtccaccatagatcctattacttattttaatttaaactgtttgttttttttataaaaaaaga--accattggattaggcaagtctattttat 34819147  T
Q  131 cttacgatgtaccaccaacac 151  Q
    |||| | ||||||||||||||    
T  34819146 cttatggtgtaccaccaacac 34819126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 43370313 - 43370354
Alignment:
Q  276 atgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  43370313 atgacctatttgaaaatgtgcaattttgacataacttacttt 43370354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 20314711 - 20314644
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggat 112  Q
    ||||||| ||||||||||  ||||| |||||||||||||| || ||||||||||||| |||| ||||||    
T  20314711 ccatagaccttattaatttatttaatttaaaccatttgat-ttattttttcaaaagaggaccgttggat 20314644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 32961246 - 32961314
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| | |||||||||||| ||||||  ||| ||||| |||||||||||||||||||| ||| ||||    
T  32961246 tactcctttcgtcccgcaatagatgacccatttaaaaatttgcaattttgacctaacttagtttgacca 32961314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 46368977 - 46369081
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacgatgtacc 143  Q
    ||||| ||| ||||||||||||||| ||||| ||||| ||  | |||||| || |||  |||||| ||||||| |  |||||| ||||||||||||||||    
T  46368977 ccatatatcatattaattattttaatttaaatcattttat--tatttttt-aagagagaaccattagattacaaatatctattttatcttacgatgtacc 46369073  T
Q  144 accaacac 151  Q
    ||||||||    
T  46369074 accaacac 46369081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 4464881 - 4464944
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||| |||| || ||||||||| |||||| || |||||  |||||||    
T  4464881 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaatgttaacctagtttacttt 4464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 47069406 - 47069469
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||| ||||| |||||   ||||||||| | ||||||||||||||| ||||||    
T  47069406 tactccctccgtcccacaatagatgacacatttgaaaattttcaattttgacctaacctacttt 47069469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 48083383 - 48083437
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatct 85  Q
    ||||||||||   ||||||||| ||||||||||||||| |||||||||| |||||    
T  48083383 taagagtggtctaccatagatcctattaattattttaatttaaaccattcgatct 48083437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 52094155 - 52094085
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||||||| |||||||| |||||   ||||||||| ||||||||||| |||||||| ||| ||||    
T  52094155 attacttcctccgttccgcaatagatgactcatttgaaaatttgcaattttgatctaacttaatttgacca 52094085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 49818760 - 49818825
Alignment:
Q  257 tccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||| |||||||||||| ||||  |  |||||||| |||||||||||||||| ||||||| ||||    
T  49818760 tcccttcgtcccgcaatagatgatttagttgaaaatttgcaattttgacctaatttactttgacca 49818825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 50035077 - 50035138
Alignment:
Q  261 tccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||| |||||  |||| |||| |  |||||||||||||||||||||| ||||    
T  50035077 tccgtcccgcaatagatgactcgtttaaaaagggacaattttgacctaacttactttgacca 50035138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 145
Target Start/End: Complemental strand, 53624309 - 53624210
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacgatgtacc 143  Q
    ||||||| |||||||||| ||| || || |||| ||||||||| |||||   |||||  ||| |||||||||||  ||||||| ||||||||||||||||    
T  53624309 ccatagaccttattaatt-tttcaattttaaccttttgatctt-tttttaagaaagagaaccgttggattacacgtgtctattttatcttacgatgtacc 53624212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 28229104 - 28229048
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaac 310  Q
    ||||||||||||||  ||||| ||||||| ||||||||||| || | ||||||||||    
T  28229104 tactccctccgtcctacaatagatgacctatttgaaaatgttcactattgacctaac 28229048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 29728363 - 29728331
Alignment:
Q  250 tcattactccctccgtcccgcaataaatgacct 282  Q
    ||||||||||||||||||| |||||||||||||    
T  29728363 tcattactccctccgtccctcaataaatgacct 29728331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 37415164 - 37415252
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatct 132  Q
    |||||||||||||||||| |||||| || |||| ||  ||  | |||||| |||||| |||||||| |||||||| || |||| |||||    
T  37415164 ccatagatcttattaattcttttaattttaaccgttaaattgtttttttttaaaagaggaccattgaattacacatgtttattttatct 37415252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 5376 - 5444
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5376 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 5444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 1098175 - 1098243
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1098175 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 1098243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 30859141 - 30859011
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||||| |||||||||| | ||||||||| ||||||||||||||| ||||||| |||||| ||  ||||| ||||||  |||||||||||| ||||    
T  30859141 tggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgat-tttctttttaaaaagagaaccattggattagacaa 30859043  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| |||||||| || ||||||||||||    
T  30859042 gtctattttatcttacaatataccaccaacac 30859011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 20040480 - 20040411
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20040480 ttactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 20040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 1781209 - 1781141
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1781209 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaagttactttgacca 1781141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 40316818 - 40316880
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40316818 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactt 40316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 41410723 - 41410661
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41410723 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactt 41410661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 14633007 - 14633075
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  14633007 tactccctccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgacca 14633075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 19344763 - 19344695
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  19344763 tactccttccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgacca 19344695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 31191241 - 31191173
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  31191241 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttactttgacca 31191173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 1831351 - 1831413
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  1831351 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacataatttactt 1831413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 13548212 - 13548281
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13548212 ttactccctccgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 13548281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 14057711 - 14057771
Alignment:
Q  257 tccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  14057711 tccctccgtcccgcaataaatgatctgtttgaaaatatgcaattttgacctaacttacttt 14057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 20022860 - 20022928
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20022860 tacttcctccttctcgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 20022928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 1102765 - 1102877
Alignment:
Q  22 gaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagt 121  Q
    |||||| | |||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||  |||||| ||| |||||||| |||||||  |||||    
T  1102765 gaccaaccttaagagtggtccaccatagatcttattaattattttaatttaaaccgtttgatct--tttttttaaatgatgaccagtggattatgcaagt 1102862  T
Q  122 ctattatatcttacg 136  Q
     |||| |||||||||    
T  1102863 gtattttatcttacg 1102877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 30211799 - 30211737
Alignment:
Q  260 ctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  30211799 ctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgatctaacttactttgacca 30211737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 14607618 - 14607553
Alignment:
Q  257 tccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||| ||||    
T  14607618 tccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttaatttgacca 14607553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 30721750 - 30721681
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| ||| ||||    
T  30721750 ttactccctccatcccgcaataaatgacatatttgaaaatgtgcaattttgacctaacttattttgacca 30721681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 36898916 - 36898819
Alignment:
Q  56 ttaattattttaacttaaaccatttgatcttgtttt-ttc-aaaagatgaccattggattacacaagtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||||||||  ||||||| |||||| || |||| ||| ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  36898916 ttaattattttagtttaaaccctttgatttttttttcttctaaaagatgaccattggattacgcatgtctattttatcttacgatgtaccaccaacac 36898819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 41263193 - 41263125
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||| ||||    
T  41263193 tactccctccgtccctcaataaatgatatgtttaaaaatgtgcaattttgacctaacttactttgacca 41263125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 27675540 - 27675603
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||||||||||||| ||||||||    
T  27675540 tactccctccgtcccgcaataaatgacttatttgaaaatttgcaattttgacctagcttacttt 27675603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 8627142 - 8627203
Alignment:
Q  261 tccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  8627142 tccgtcccgcaatagatgacctatttgaaaatgtgcaattttgatctaacttactttgacca 8627203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 22047890 - 22048010
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||| ||| ||| ||||||||||| ||||||| |||||| || |||||| ||||||  ||||||| |||| | | ||||||| |||    
T  22047890 taagagtggtccaccataaatcctatgaattattttaatttaaaccgtttgatttttttttttgaaaagagaaccattgaattagaaaggtctattttat 22047989  T
Q  131 cttacgatgtaccaccaacac 151  Q
    ||||| |||||||| ||||||    
T  22047990 cttacaatgtaccatcaacac 22048010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 22308759 - 22308640
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | |||||||  ||||||| | ||||||  ||||||||||||||| ||||||| ||||||||||||||||||||  || ||||||| |      
T  22308759 taagagtggtccaccatagacattattaaattttttaatgtaaaccatttgatct-gttttttaaaaagatgaccattggattatgcatgtctattgtta 22308661  T
Q  131 cttacgatgtaccaccaacac 151  Q
    |||||| ||||||| ||||||    
T  22308660 cttacggtgtaccaacaacac 22308640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 30910888 - 30911017
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||| | |||||||||| | ||||||||| ||||||||||||||| || |||| |||||   | ||| || ||||||  ||||||| ||||  ||     
T  30910888 tggaccaaccttaagagtggtccaccatagatcctattaattattttaatttcaaccgtttga--gtttttctttaaaagagaaccattgaattaggcat 30910985  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| ||||||||||||||||||||||||    
T  30910986 gtctattttatcttacgatgtaccaccaacac 30911017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 33402655 - 33402592
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||| |||| |||| |||||| |||||||| |||||||||||||||||||||    
T  33402655 tactccctccgtcccgtaatagatgatctgtttaaaaatgtgtaattttgacctaacttacttt 33402592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 11262538 - 11262610
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttt 92  Q
    |||||||| | |||||||||| | ||||||||| ||||||||||| ||| ||||||||||||||||| |||||    
T  11262538 tggaccaaccttaagagtggtccaccatagatcctattaattattataatttaaaccatttgatctttttttt 11262610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 30788205 - 30788273
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| |||| ||||||  |||||||||||| ||||||||| ||||||||||| ||||    
T  30788205 tactccctccgtcccgtaatatatgacccatttgaaaatgtgtaattttgacataacttactttgacca 30788273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 9936954 - 9936884
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||||||||||  | ||| ||||||||||||||||| |||| ||| ||| ||||    
T  9936954 attactccctccgtcccgcaataaatgatatatttaaaaatgtgcaattttgatctaatttattttgacca 9936884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 40079979 - 40080049
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||  ||||| ||||||| ||||||||| | ||||||| |||||||||||||| ||||    
T  40079979 attactccctccgtcctacaatagatgacctatttgaaaatttacaattttaacctaacttactttgacca 40080049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 4127219 - 4127089
Alignment:
Q  25 caatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttc----aaaagatgaccattggattacacaag 120  Q
    ||||| ||| |||||| | ||||||||| | ||||||| ||||| |||||||||||||| ||  |||||     ||||||  |||||| |||| |||| |    
T  4127219 caatcttaaaagtggtccaccatagatcctgttaattaatttaatttaaaccatttgatttttattttttttgtaaaagagaaccattagattgcacagg 4127120  T
Q  121 tctattatatcttacgatgtaccaccaacac 151  Q
    |||||| ||||||| ||||||||||||||||    
T  4127119 tctattttatcttatgatgtaccaccaacac 4127089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 9220416 - 9220300
Alignment:
Q  32 aagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatc 131  Q
    ||||||||| | ||||| ||||||||||||||||||| ||||||| |||||   | |||  | |||||| |||| |||||||||||| ||||||| || |    
T  9220416 aagagtggtcccccataaatcttattaattattttaatttaaaccgtttga---tttttccttaaaagacgaccgttggattacacatgtctattttacc 9220320  T
Q  132 ttacgatgtaccaccaacac 151  Q
     |||||||||  ||||||||    
T  9220319 atacgatgtattaccaacac 9220300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 10465360 - 10465291
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||| |||||||||| ||||||| ||||||||| |  |||||||||||| |||||||| ||||    
T  10465360 ttactccctccctcccgcaatagatgacctatttgaaaatttataattttgacctatcttactttgacca 10465291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 34347474 - 34347535
Alignment:
Q  261 tccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||| |||||||| ||||||| |||||||||||| ||||||||| ||||||||||| ||||    
T  34347474 tccgttccgcaatagatgacctatttgaaaatgtgtaattttgacataacttactttgacca 34347535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 2799638 - 2799694
Alignment:
Q  261 tccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||| ||| |||| ||||||  ||||||||||||||||||||||||||||||||||    
T  2799638 tccgttccgtaatagatgacccatttgaaaatgtgcaattttgacctaacttacttt 2799694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 2551693 - 2551623
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| |||| |||| | |||| ||||||  ||| |||||||||||||||||||||||||| ||||||||    
T  2551693 attacttcctcagtcctgaaatagatgacccatttaaaaatgtgcaattttgacctaacttattttaacca 2551623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 41042890 - 41042833
Alignment:
Q  265 tcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||| |||| ||||||||| ||||||||||| ||| |||||||| ||||    
T  41042890 tcccgcaataaataacctatttgaaaatttgcaattttgatctagcttactttgacca 41042833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 967222 - 967258
Alignment:
Q  284 tttgaaaatgtgcaattttgacctaacttactttaac 320  Q
    ||||||||| |||||||||||||||||||||||||||    
T  967222 tttgaaaatttgcaattttgacctaacttactttaac 967258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 13520759 - 13520640
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||||| ||||||||| ||||||||| ||| | ||||||  || ||| || |||| | ||||||  ||| |||||||||  | ||||||| |||    
T  13520759 taagagtggttcaccatagatcctattaattaatttgatttaaactgttggat-tttttttataaaaagagaaccgttggattacgaaggtctattttat 13520661  T
Q  131 cttacgatgtaccaccaacac 151  Q
    |||| |||||| |||||||||    
T  13520660 cttatgatgtatcaccaacac 13520640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 39925203 - 39925271
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||| |||| |  ||||||||| || |||||||||| || ||||||| ||||    
T  39925203 tactccctccgtcccgcaatagatgatccatttgaaaatttgtaattttgaccaaatttactttgacca 39925271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 32110736 - 32110673
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||| |||||||| || | |  ||||||||||||||||||||| |||| |||||||    
T  32110736 tactccctccgttccgcaatagataatccatttgaaaatgtgcaattttgatctaatttacttt 32110673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 2805814 - 2805860
Alignment:
Q  271 aataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||| ||||||  |||||||||||||||||||||||||| |||||||    
T  2805814 aatagatgacccatttgaaaatgtgcaattttgacctaatttacttt 2805860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 34169832 - 34169897
Alignment:
Q  257 tccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||| |||||||||||| |||| || ||||||||| ||||||||||| |||  ||||||| ||||    
T  34169832 tcccttcgtcccgcaatagatgatctatttgaaaatttgcaattttgatctagtttactttgacca 34169897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 33172743 - 33172823
Alignment:
Q  70 ttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacgatgtaccaccaaca 150  Q
    ||||||| ||||||||  |||||| |||||||||||||| |||||  |  ||||||| || |||||| ||||||| |||||    
T  33172743 ttaaaccgtttgatctattttttttaaaagatgaccattagattatgcgtgtctattttaacttacggtgtaccaacaaca 33172823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 6e-28; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 38069048 - 38069119
Alignment:
Q  251 cattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38069048 cattactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 38069119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 36819614 - 36819679
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36819614 attactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 36819679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 16807210 - 16807142
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16807210 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 16807142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 35693894 - 35693832
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 316  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35693894 tactccctccgtcgcgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 35693832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 30462285 - 30462217
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  30462285 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacttaacttactttgacca 30462217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 32255136 - 32255264
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||| | |||||||||| | ||||||||| ||||||||||||||| || |||| |||||| || || |   ||||||| |||||||||||| |||     
T  32255136 tggaccaaccttaagagtggtccaccatagatcctattaattattttaatttcaaccgtttgatttttttgt---aaaagataaccattggattagacag 32255232  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    |||||||  |||||||||||||||||||||||    
T  32255233 gtctatttaatcttacgatgtaccaccaacac 32255264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 25274081 - 25274013
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  25274081 tactccatccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgacca 25274013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 37101090 - 37101022
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  37101090 tactccctccgtcccgcaatagatgacctatttgaaaatgtgtaattttgacctaacttactttgacca 37101022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 44372885 - 44372994
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||||||||||||| | ||||| ||||||||| |||| | |||||| ||||||| ||||||||| ||||||| |||    
T  44372885 taagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatctt-ttttcttaaaagaggaccattagattacacatgtctattttat 44372983  T
Q  131 cttacgatgta 141  Q
    |||| ||||||    
T  44372984 cttaggatgta 44372994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 44381741 - 44381850
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||||||||||||| | ||||| ||||||||| |||| | |||||| ||||||| ||||||||| ||||||| |||    
T  44381741 taagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatctt-ttttcttaaaagaggaccattagattacacatgtctattttat 44381839  T
Q  131 cttacgatgta 141  Q
    |||| ||||||    
T  44381840 cttaggatgta 44381850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 40231928 - 40231996
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||    
T  40231928 tactccctccgtcccgtaataaataacctgtttgaaaatgtgcaattttgacctaatttattttgacca 40231996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 22537729 - 22537832
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacgatgtacc 143  Q
    ||||||||| ||||||||||||||| ||||||| ||||||    |||||| |||||   ||||||||||||  || ||||||| |||||||||||| |||    
T  22537729 ccatagatcctattaattattttaatttaaaccgtttgat----tttttttaaaagggaaccattggattatgcaggtctattttatcttacgatgaacc 22537824  T
Q  144 accaacac 151  Q
    ||||||||    
T  22537825 accaacac 22537832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 32972393 - 32972323
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||| |||||||||| ||||||| ||||||||| ||||| ||||||||| |||||||| ||||    
T  32972393 attactccctccctcccgcaatagatgacctatttgaaaatttgcaagtttgacctagcttactttgacca 32972323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 35265881 - 35265823
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactt 312  Q
    |||||||||||||||| |||||||||| ||||| ||||||| |||||||||||||||||    
T  35265881 tactccctccgtcccgtaataaatgacttgtttaaaaatgtacaattttgacctaactt 35265823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 13564198 - 13564080
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||||||||||||| || |||| || |||  | |||||| ||||||  |||||||||||| ||| ||||||| ||     
T  13564198 taagagtggtccaccatagatcctattaattattttaatttgaaccgttagat--tattttttaaaaagagaaccattggattagacatgtctattttag 13564101  T
Q  131 cttacgatgtaccaccaacac 151  Q
    |||| ||||||| ||||||||    
T  13564100 cttatgatgtactaccaacac 13564080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 48312209 - 48312300
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacg 136  Q
    ||||||||| |||||||| |||||| |||||   ||||||||| |||||| ||| ||||||||||||||||| || ||||||| |||||||||    
T  48312209 ccatagatcctattaatt-ttttaatttaaatggtttgatctttttttttaaaaggatgaccattggattacgcaggtctattttatcttacg 48312300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 35295844 - 35295909
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatct 85  Q
    |||||||| | |||||||||| | ||||||||| ||||||||||||||| ||||||| ||||||||    
T  35295844 tggaccaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatct 35295909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 46242544 - 46242476
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||| ||||| ||||||  ||||   |||||||||||||||||||||||||||||||||| ||||    
T  46242544 tactcccttcgtcctgcaatatttgactcatttgaaaatgtgcaattttgacctaacttactttgacca 46242476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 47713493 - 47713433
Alignment:
Q  257 tccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||| |||||  |||| ||||||  ||||||||||||||||||||||||||||||||||    
T  47713493 tccctctgtcccataatagatgacccatttgaaaatgtgcaattttgacctaacttacttt 47713433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 43460782 - 43460727
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatctt 86  Q
    |||||||||| | ||||||||| ||||||||||||||| ||||||| |||||||||    
T  43460782 taagagtggtccaccatagatcctattaattattttaatttaaaccctttgatctt 43460727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 38850708 - 38850770
Alignment:
Q  260 ctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| || ||||| ||||||  |||||||||||| ||||||||||||||||||||| ||||    
T  38850708 ctccgttccacaatagatgacccatttgaaaatgtgtaattttgacctaacttactttgacca 38850770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 40818754 - 40818700
Alignment:
Q  261 tccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttact 315  Q
    ||||||||| |||| |||| || ||||||||||||||||||||| ||||||||||    
T  40818754 tccgtcccgtaatagatgatctatttgaaaatgtgcaattttgatctaacttact 40818700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 16756040 - 16756128
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttac 135  Q
    ||||||||| ||||||||||||||| || ||||||||||   | |||||| ||| || ||||||| |||||| ||||| |||| ||||||||    
T  16756040 ccatagatcctattaattattttaattttaaccatttga---ttttttttaaaaggaggaccattagattacgcaagtgtattttatcttac 16756128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 28016115 - 28016183
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||| | ||||| | |||||  ||||||||||||||||||||| |||||||||||| ||||    
T  28016115 ttactccctccgttctgcaatga-tgacccatttgaaaatgtgcaattttgatctaacttactttgacca 28016183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 9173400 - 9173332
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||| ||| |||| ||||||  ||| |||| ||| ||||||||||||||||||||| ||||    
T  9173400 tactccctccgttccggaatagatgaccaatttaaaaacgtgtaattttgacctaacttactttgacca 9173332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 18756599 - 18756662
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||| ||||| ||| |||| ||||||  ||||||||| ||||||||||||||| ||||||||    
T  18756599 tactccatccgttccgtaatagatgacccatttgaaaatatgcaattttgacctatcttacttt 18756662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 32222548 - 32222615
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaa 319  Q
    |||||||||||||| ||| |||| ||||||  | | ||||||||||||||||| |||| |||||||||    
T  32222548 attactccctccgttccgtaatagatgacccatctcaaaatgtgcaattttgatctaatttactttaa 32222615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 4620097 - 4620135
Alignment:
Q  284 tttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  4620097 tttgaaaatgtgtaattttgacctaacttactttgacca 4620135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 39982117 - 39982171
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgaccta 308  Q
    |||||||| ||||| |||||||||||||| ||| | |||||||||| ||||||||    
T  39982117 tactcccttcgtcctgcaataaatgacctattttataatgtgcaatattgaccta 39982171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 43441502 - 43441605
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | |||||  || |||||||||||||||  |||||  |||||| |  |||||| ||| |||||| |||||||||| ||||| |||| |||    
T  43441502 taagagtggtccaccataagtcctattaattattttaatgtaaactgtttgatat--tttttttaaaggatgactattggattacgcaagtgtattttat 43441599  T
Q  131 cttacg 136  Q
    ||||||    
T  43441600 cttacg 43441605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 47059278 - 47059371
Alignment:
Q  44 ccatagatcttattaattatttt--aacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttac 135  Q
    ||||||| |||||||||| ||||  || ||||||| ||||||||  || ||| ||| ||||||||||||||||| || || |||| ||||||||    
T  47059278 ccatagaccttattaatttttttttaatttaaaccgtttgatctgtttatttaaaaggatgaccattggattacgcatgtgtattttatcttac 47059371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 47060423 - 47060334
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatctta 134  Q
    ||||||| |||||||| | ||| || || || | |||||| ||||||||| ||| ||||||||||| ||||||||||| |||| |||||||    
T  47060423 ccatagaccttattaaatttttaaaatttaatcgtttgat-ttgttttttaaaaggatgaccattgaattacacaagtgtattttatctta 47060334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 317
Target Start/End: Complemental strand, 31496679 - 31496646
Alignment:
Q  284 tttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||| ||||||||||||||||||||||    
T  31496679 tttgaaaatgtacaattttgacctaacttacttt 31496646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 46835906 - 46835951
Alignment:
Q  106 attggattacacaagtctattatatcttacgatgtaccaccaacac 151  Q
    |||| |||| ||||||||||| |||| |||||||||||||||||||    
T  46835906 attgtattagacaagtctattttatcatacgatgtaccaccaacac 46835951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 9136728 - 9136672
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgaccta 308  Q
    |||||||||||| |||||||||| |||| |  ||||| |||||| ||||||||||||    
T  9136728 attactccctccatcccgcaatagatgatccatttgataatgtgtaattttgaccta 9136672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 19327328 - 19327380
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttga 304  Q
    ||||||| ||||||||||||||| ||||| | ||| ||||| |||||||||||    
T  19327328 attactctctccgtcccgcaatagatgacatatttaaaaatttgcaattttga 19327380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 42493517 - 42493585
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||| ||||| ||||||| ||||| |||||||    |||||||||| |||||| ||||    
T  42493517 tactccctccgtcccacaatagatgacctatttgacaatgtgcgcgattgacctaacatactttgacca 42493585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 7724672 - 7724606
Alignment:
Q  256 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7724672 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 7724606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 12208988 - 12209057
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12208988 ttacttcctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 12209057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 31603477 - 31603416
Alignment:
Q  256 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31603477 ctccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 31603416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 8373434 - 8373502
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  8373434 tactccctctgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgacca 8373502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 16127842 - 16127780
Alignment:
Q  255 actccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  16127842 actccctccgtcccgcaataaatgacctatttgaaaatgtgtaattttgacctaacttacttt 16127780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 16126146 - 16126077
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  16126146 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgacca 16126077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 16333479 - 16333548
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  16333479 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgacca 16333548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 40471736 - 40471795
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 313  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  40471736 tactccctccgtcccgcaataaataacctgtttgaaaatgtgcaattttgacttaactta 40471795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 41575562 - 41575625
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  41575562 tactccctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttacttt 41575625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 38963793 - 38963863
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  38963793 attactccctctgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgacca 38963863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 5096247 - 5096307
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 313  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  5096247 ttactccctccgtcccgcaataaattacctgtttgaaaatgtacaattttgacataactta 5096307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 18616975 - 18616846
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    ||||||| || ||| |||||| | ||||||||| ||||||||||||||| || |||| |||||| ||  ||||  ||||||  |||||||||||| | |     
T  18616975 tggaccagtcttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatttt--ttttaaaaaagagaaccattggattagatag 18616878  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| ||||||||||||||||||||||||    
T  18616877 gtctattttatcttacgatgtaccaccaacac 18616846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 10333644 - 10333573
Alignment:
Q  251 cattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||    
T  10333644 cattactccctccgtctcgtaataaatgatctgtttgaaaatgtgtaattttgacctaacttattttgacca 10333573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 8896271 - 8896339
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||| | |||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||    
T  8896271 tactccctccattccgcaatagatgacccatttgaaaatgtgcaattttgacctaacttactttgacca 8896339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 11277562 - 11277614
Alignment:
Q  265 tcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  11277562 tcccgcaataaatgacctatttgaaaatgtgcaattttgacataacttacttt 11277614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 41436832 - 41436900
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||| |||||||||  |||||||||||||  ||||||||||||||||||||| ||||    
T  41436832 tactccctccgtcccgtaataaatgaaatgtttgaaaatgtataattttgacctaacttactttgacca 41436900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 4137410 - 4137465
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaa 309  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  4137410 tactccctccgtcccgcaataaatgacatgtttgaaaatgtacaattttgatctaa 4137465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 29219532 - 29219660
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||||| ||| |||||| | ||||||||| ||||||||||||||| || |||| |||||| ||        ||||||  |||||||||||| | |     
T  29219532 tggaccaatcttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgattttaaaaa---aaaagagaaccattggattagatag 29219628  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| ||||||||||||||||||||||||    
T  29219629 gtctattttatcttacgatgtaccaccaacac 29219660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 29332831 - 29332959
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||||| ||| |||||| | ||||||||| ||||||||||||||| || |||| |||||| ||        ||||||  |||||||||||| | |     
T  29332831 tggaccaatcttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgattttaaaaa---aaaagagaaccattggattagatag 29332927  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| ||||||||||||||||||||||||    
T  29332928 gtctattttatcttacgatgtaccaccaacac 29332959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 37316876 - 37316929
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacct 307  Q
    ||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||    
T  37316876 tactccctccgtcccgcaatcgatgacctatttgaaaatttgcaattttgacct 37316929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 6730166 - 6730106
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttac 314  Q
    ||||||||||||| ||||||| |||||||  |||||||| ||||||||||||||| |||||    
T  6730166 tactccctccgtctcgcaatagatgacctacttgaaaatttgcaattttgacctagcttac 6730106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 20682653 - 20682717
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||||  |||||| ||| ||||| ||||||||||||| | ||||||||    
T  20682653 ttactccctccgtcccgcaatagttgacctatttaaaaatttgcaattttgacccagcttacttt 20682717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 22718606 - 22718538
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||| ||||||| || ||||||||| || ||||||||| ||||||||||||||| |||||||| ||||    
T  22718606 tactctctccgtcgcgtaataaatgatctatttgaaaatttgcaattttgacctagcttactttgacca 22718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 18504470 - 18504540
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||||||||||| |||| ||||| | |||||||||||| ||||||||| ||||||| ||| ||||    
T  18504470 attacttcctccgtcccgtaatagatgacttatttgaaaatgtgtaattttgacgtaacttattttgacca 18504540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 37987982 - 37987936
Alignment:
Q  271 aataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||    
T  37987982 aataaatgacctgtttgaaaatgcgcaattttgatctaagttacttt 37987936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 2831707 - 2831775
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||| |||| |||| |||||||| |  ||| |||||||| ||||||||||||||||||||| ||||    
T  2831707 tactcccaccgtaccgcgataaatgatccatttaaaaatgtgtaattttgacctaacttactttgacca 2831775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 34467662 - 34467782
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaa-gatgaccattggattacacaagtctattata 129  Q
    |||||||||| | ||||| | |||||||| | |||||| ||||||  |||||| || |||||| |||| |||||||| ||||||| |   ||||||| ||    
T  34467662 taagagtggtccaccataaaccttattaagttttttaatttaaactgtttgatattttttttttaaaatgatgaccactggattatatgtgtctattgta 34467761  T
Q  130 tcttacgatgtaccaccaaca 150  Q
     |||||||||||||| |||||    
T  34467762 acttacgatgtaccaacaaca 34467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 45036363 - 45036423
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttac 314  Q
    |||||||||||||| |||||| ||||||  ||| |||||||| ||||||||| ||||||||    
T  45036363 tactccctccgtcctgcaatagatgacccatttaaaaatgtgtaattttgacttaacttac 45036423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 7436668 - 7436735
Alignment:
Q  78 tttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatcttacgatgtaccac 145  Q
    ||||||||| |||||  |||||| |||| ||||||||||||  |||||| ||||||| ||||||||||    
T  7436668 tttgatcttttttttaaaaaagaggaccgttggattacacatatctattttatcttaggatgtaccac 7436735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 16646244 - 16646314
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||| |||||| ||||| |||||||||| || ||| ||||| || |||||||||||| |||||||| ||||    
T  16646244 attattccctcagtcccacaataaatgagctatttaaaaatttgtaattttgacctagcttactttgacca 16646314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 42641820 - 42641758
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgtttttt 93  Q
    ||||||||||   ||||||||| ||||||||||||||| ||||||  ||||||||| ||||||    
T  42641820 taagagtggtctaccatagatcctattaattattttaatttaaactgtttgatcttttttttt 42641758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 317
Target Start/End: Original strand, 44022297 - 44022331
Alignment:
Q  283 gtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||||||| ||||||||||||||    
T  44022297 gtttgaaaatgtgcaattttaacctaacttacttt 44022331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 8320913 - 8321013
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||| ||| | ||||||||  ||||||||||||||| ||||||| |||||| |  |||||| |||||| || |||| ||| || |||||||||| |||    
T  8320913 taagagcggtccaccatagattatattaattattttaatttaaaccgtttgat-tgttttttttaaaagaggaacatttgatcacgcaagtctattttat 8321011  T
Q  131 ct 132  Q
    ||    
T  8321012 ct 8321013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 6075125 - 6075193
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||| |||||||| ||||||| |||||  |||||||||| | |||||||||  ||||||||||| ||||    
T  6075125 tactacctccgtcgcgcaatagatgactcgtttgaaaattttcaattttgatttaacttactttgacca 6075193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 25762193 - 25762249
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaa 309  Q
    |||||||||||||||   |||| |||| ||||||||||||||||| | |||||||||    
T  25762193 ttactccctccgtcctataatagatgatctgtttgaaaatgtgcactattgacctaa 25762249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 25766443 - 25766499
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaa 309  Q
    ||||||| ||||||| | |||| |||| ||||||||||||||||| | |||||||||    
T  25766443 ttactccttccgtcctgtaatagatgatctgtttgaaaatgtgcactattgacctaa 25766499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 32469306 - 32469358
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgat 83  Q
    |||||||||| | | ||||||| ||||||||||||||| ||||||| ||||||    
T  32469306 taagagtggtccactatagatcctattaattattttaatttaaaccctttgat 32469358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 30464431 - 30464500
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  30464431 ttactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgacca 30464500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 151
Target Start/End: Complemental strand, 32695241 - 32695116
Alignment:
Q  23 accaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtc 122  Q
    ||||||| ||||| |||| | ||||||||| ||||||||||||||| ||||||| |||||| || ||||   ||||||  |||||||||||| |||||||    
T  32695241 accaatcttaagattggtccaccatagatcctattaattattttaatttaaaccgtttgattttttttt---aaaagagaaccattggattagacaagtc 32695145  T
Q  123 tattatatcttacgatgtaccaccaacac 151  Q
    |||| ||||||||||| ||||||||||||    
T  32695144 tattttatcttacgatataccaccaacac 32695116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 23437874 - 23437806
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||    
T  23437874 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttgctttgacca 23437806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 14378751 - 14378684
Alignment:
Q  250 tcattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  14378751 tcattactccctccgtcccgcaataaatgataggtttgaaaatgtgcaattttgacctaacttacttt 14378684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 17455194 - 17455321
Alignment:
Q  22 gaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagt 121  Q
    |||||||| ||| |||||| | ||||||||||||||||||||||||| || |||| ||| ||||  |||||  |||||| ||||||| |||||| || ||    
T  17455194 gaccaatcttaaaagtggtccaccatagatcttattaattattttaatttgaaccgttttatctatttttt--aaaagaggaccattagattacgcaggt 17455291  T
Q  122 ctattatatcttacgatgtaccaccaacac 151  Q
    ||||| |||||||||||||||||| |||||    
T  17455292 ctattttatcttacgatgtaccactaacac 17455321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 761549 - 761618
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  761549 ttactccctctgtcccgcaataaatgacctgtttgaaaatgtgtaattttgacctaatttactttgacca 761618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 25691659 - 25691590
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  25691659 ttactccatccgttccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgacca 25691590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 4327180 - 4327117
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  4327180 tactccctgcgtcccgcaataaatgacttgtttgaaaatgtgcaattttgatctaacttacttt 4327117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 28583364 - 28583301
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  28583364 tactccctccgtcccgcaatagatgacctttttgaaaatgtgcaattttgacctaatttacttt 28583301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 20180634 - 20180525
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | ||||||||| ||||||||||||||| | ||||| ||||||||| |||| | |||||| ||||||| ||||||||| ||||||| |||    
T  20180634 taagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatctt-ttttcttaaaagaggaccattagattacacatgtctattttat 20180536  T
Q  131 cttacgatgta 141  Q
    |||| ||||||    
T  20180535 cttaggatgta 20180525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 25009142 - 25009212
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  25009142 attacttcctccgtccctcaataaatgatctgtttgaaaatgtgcaattttgacctaatttactttgacca 25009212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 3466282 - 3466346
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||||    
T  3466282 ttactccctccgtcccgcaatagatgacccatttgaaaatgcgcaattttgacctaacttacttt 3466346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 37094132 - 37094200
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||    
T  37094132 tacttcctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgacca 37094200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 44887776 - 44887708
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||| ||| ||||    
T  44887776 tactccctccgtcccgcaataaatgatctatttgaaaatgtgcaattttgacctgacttagtttgacca 44887708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 38842161 - 38842226
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttg-aaaatgtgcaattttgacctaacttacttt 317  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  38842161 ttacttcctccgtcccgtaataaatgacctgtttgaaaaatgtgtaattttgacctaacttacttt 38842226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 43184841 - 43184772
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||  |||||||||||||||||||| ||||    
T  43184841 ttactccctccatcctgcaataaatgacctgtttaaaaatgtgttattttgacctaacttactttgacca 43184772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 24192634 - 24192504
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||| | |||||||||| | ||||||||| ||||||||||||||| | ||||| |||||| || |||| | ||||||  |||||| |||||| ||     
T  24192634 tggaccaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgat-tttttttcttaaaagagaaccattagattacgcat 24192536  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| ||| ||| |||||| |||||||||    
T  24192535 gtctattttattttaggatgtatcaccaacac 24192504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 11756775 - 11756844
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||| || |||||||| ||||| | ||||||||| |||||||||||||||||||||||| ||||    
T  11756775 ttactccctctgttccgcaatagatgacttatttgaaaatttgcaattttgacctaacttactttgacca 11756844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 23547066 - 23547131
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||||||  |||||||||||||||| ||| |||| |||||||| ||||||||||||    
T  23547066 attactccctccgtcccataataaatgacctgtttaaaattgtgtaattttgatctaacttacttt 23547131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 5777615 - 5777547
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||| ||| ||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||    
T  5777615 tactccatccatcctgcaataaatgacctgtttgaaaatgtgtaattttgatctatcttattttaacca 5777547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 6397942 - 6398041
Alignment:
Q  35 agtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatatctta 134  Q
    |||||| | ||||||| |||||||||| |||||| ||||||||||||||| |||||||  ||| ||||| |||| |||||||||| | |||| |||||||    
T  6397942 agtggtccaccatagaccttattaatttttttaatttaaaccatttgatc-tgtttttaaaaaggatgatcatttgattacacaaatgtattttatctta 6398040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 20671256 - 20671324
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||| ||||||| |||| |  |||||||||||| ||||||||||||||||||||| ||||    
T  20671256 tactccctccgtcgcgcaatagatgatcaatttgaaaatgtgtaattttgacctaacttactttgacca 20671324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 8496950 - 8496879
Alignment:
Q  251 cattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||| |||||||| | ||||  |||||  |||||||||||||||||||||||||||||||||| ||||    
T  8496950 cattactctctccgtcctgtaatagttgacccatttgaaaatgtgcaattttgacctaacttactttgacca 8496879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 40645609 - 40645672
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||| ||| ||  ||||||||| | ||||||||||||||||||||||    
T  40645609 tactccctccgtcccgcaatagatggcccatttgaaaattttcaattttgacctaacttacttt 40645672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 4960151 - 4960219
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||||||||| |||| |||| || ||||||||| ||||||||||||||| |||||||| ||||    
T  4960151 tactccttccgtcccgtaatagatgatctatttgaaaatttgcaattttgacctagcttactttgacca 4960219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 15870175 - 15870238
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||| | ||||||| |||||||||||||||  ||||||||| |||| |||||||    
T  15870175 tactccctccgtccagtaataaataacctgtttgaaaatgaacaattttgatctaatttacttt 15870238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 32798491 - 32798436
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatctt 86  Q
    |||||||||| | ||||||||| ||||||||||||||| ||||||| |||||||||    
T  32798491 taagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatctt 32798436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 42870960 - 42871074
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||||| |||||||||| | || |||| |||||||| | || ||| ||||||| |||||||| || |||| ||| ||||||||||| ||||| ||     
T  42870960 tggaccaatcttaagagtggtccaccgtagaccttattaaattttgtaatttaaaccgtttgatct-gtgttttaaaaggatgaccattgaattacgcat 42871058  T
Q  120 gtctattatatcttac 135  Q
    || |||| ||||||||    
T  42871059 gtgtattttatcttac 42871074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 44717296 - 44717359
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||  |||| |  |||||||||||| |||||||| ||||||||||||    
T  44717296 tactccctccgtcccgcaatggatgatccatttgaaaatgtgtaattttgaactaacttacttt 44717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 44361921 - 44361989
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||  |||||||||| ||||||| ||||||||| ||||||||||| |||  ||||||| ||||    
T  44361921 tactccctcattcccgcaatagatgacctatttgaaaatttgcaattttgagctagtttactttgacca 44361989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 44947018 - 44947080
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||| |||||| ||||||  ||| |||||||||||||||||||||  |||||||    
T  44947018 tactccctccgtcc-gcaatagatgacccatttaaaaatgtgcaattttgacctattttacttt 44947080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 21132959 - 21132921
Alignment:
Q  284 tttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  21132959 tttgaaaatgtgcaattttgacttaacttactttgacca 21132921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 31845755 - 31845652
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaagtctattatat 130  Q
    |||||||||| | |||||| || |||||||||||||||  |||||  ||||||||  |||||| ||| |||||||||| ||||||  | || |||| |||    
T  31845755 taagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatct--tttttttaaaggatgaccattagattacgtaggtgtattttat 31845658  T
Q  131 cttacg 136  Q
    ||||||    
T  31845657 cttacg 31845652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 8123653 - 8123714
Alignment:
Q  252 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 313  Q
    |||||||||||||| | |||||| |||| |  ||| |||||||| |||||||||||||||||    
T  8123653 attactccctccgttctgcaatagatgatccatttaaaaatgtgtaattttgacctaactta 8123714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 9854839 - 9854778
Alignment:
Q  31 taagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttt 92  Q
    |||||||||| | ||||||||| |||||||| || ||| |||||||||||||| || |||||    
T  9854839 taagagtggtccaccatagatcctattaattcttctaatttaaaccatttgatttttttttt 9854778  T

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Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 43049323 - 43049262
Alignment:
Q  261 tccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||||||| || ||||||||| || |||||||| ||| || ||||| ||||    
T  43049323 tccgtcccgcaataaatgatctatttgaaaatttgtaattttgatctagctaactttgacca 43049262  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 44076308 - 44076267
Alignment:
Q  44 ccatagatcttattaattattttaacttaaaccatttgatct 85  Q
    ||||| |||||||||||| |||||| ||||||||||||||||    
T  44076308 ccataaatcttattaatttttttaatttaaaccatttgatct 44076267  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 8571544 - 8571457
Alignment:
Q  63 ttttaacttaaaccatttgatcttgttttttcaaaaga-tgaccattggattacacaagtctattatatcttacgatgtaccaccaaca 150  Q
    |||||| ||||||  |||||||| |||| || |||||| |||||||||||||| ||  ||||||| || |||||||||||||| |||||    
T  8571544 ttttaatttaaactgtttgatct-gtttcttaaaaagaatgaccattggattatacgtgtctattgtaacttacgatgtaccaacaaca 8571457  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 12893789 - 12893721
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||| || |||||||||| ||||| ||| |||| | ||||| |||| |||||| ||||    
T  12893789 tactccctccgtccctcagtaaatgacctatttgacaatatgcattattgacttaacatactttgacca 12893721  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 17523804 - 17523868
Alignment:
Q  253 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||| ||||| |||  ||||| ||||||  |||||||||||||| |||| ||||||||||||||    
T  17523804 ttacttcctccctcctacaatagatgacccatttgaaaatgtgcagttttaacctaacttacttt 17523868  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 30653360 - 30653428
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    |||||| ||||||||| |||| ||| ||  ||| ||||||||||||||| | |||||||||||| ||||    
T  30653360 tactccatccgtcccgtaatagatgcccaatttaaaaatgtgcaattttaatctaacttactttgacca 30653428  T

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Target: scaffold0001 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 183966 - 184034
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  183966 tactccctccgtctcgcaataaataacctgtttgaaaatgtgcaattttgacctaacttactttgacca 184034  T

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Target: scaffold0281 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 13104 - 13172
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||    
T  13104 tactccctccgtcccacaataaatgacctgtttaaaaatttgcaattttgacctagcttactttgacca 13172  T

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Target: scaffold2071 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 653 - 559
Alignment:
Q  19 atggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggatta 114  Q
    ||||||||| | |||||||||| | ||||||| |||||||| | |||||| ||||||| |||||||| ||||||| ||||||||||||||||||||    
T  653 atggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatct-gttttttaaaaagatgaccattggatta 559  T

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Target: scaffold0204 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 24011 - 23950
Alignment:
Q  256 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||    
T  24011 ctccctccgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttacttt 23950  T

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Target: scaffold0118 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 43544 - 43416
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||||| |||||||||| | ||||||||| ||||||||||||||| ||||||| |||||   | |||||| ||||||  |||||| |||||  |||    
T  43544 tggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttga---ttttttttaaaaagagaaccatttgattaggcaa 43448  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| ||||| ||||| || |||| ||||    
T  43447 gtctattttatctaacgatatatcaccgacac 43416  T

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Target: scaffold0500 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 739 - 671
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaacca 322  Q
    ||||||||||| ||||||||| ||||||  ||||||||| |||||||||||||||||||| ||| ||||    
T  739 tactccctccgccccgcaatagatgacccatttgaaaatatgcaattttgacctaacttagtttgacca 671  T

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Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 54154 - 54025
Alignment:
Q  20 tggaccaatcgtaagagtggttctccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggattacacaa 119  Q
    |||||||| | ||| |||||| | ||||||||| ||||||||||||||| ||||||  |||||| ||  ||||  ||||||    ||||||||||  |||    
T  54154 tggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaaactgtttgatttt--ttttaaaaaagagtgtcattggattaagcaa 54057  T
Q  120 gtctattatatcttacgatgtaccaccaacac 151  Q
    ||||||| |||| |||||||||||||||||||    
T  54056 gtctattttatcatacgatgtaccaccaacac 54025  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 125203 - 125108
Alignment:
Q  19 atggaccaatcgtaagagtggttctccatagatcttattaa-ttattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggatta 114  Q
    ||||||||| | ||| |||||| | ||||||| |||||||| || |||||| ||||||| |||||||  ||||||| ||||||||||||||||||||    
T  125203 atggaccaaccttaaaagtggtccaccatagaccttattaaatttttttaatttaaaccctttgatca-gttttttaaaaagatgaccattggatta 125108  T

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Target: scaffold0283 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 2996 - 3058
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttt 317  Q
    |||||||||||||| |||||| ||||||  ||| |||||||||||||||||||||  |||||||    
T  2996 tactccctccgtcc-gcaatagatgacccatttaaaaatgtgcaattttgacctattttacttt 3058  T

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Target: scaffold0069 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 4441 - 4500
Alignment:
Q  254 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 313  Q
    |||||| ||||||| |||||||||||    ||| ||||||||||||||||||||||||||    
T  4441 tactccttccgtcctgcaataaatgattcatttaaaaatgtgcaattttgacctaactta 4500  T

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Target: scaffold0289 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 317
Target Start/End: Original strand, 9165 - 9198
Alignment:
Q  284 tttgaaaatgtgcaattttgacctaacttacttt 317  Q
    ||||||||||||||||||||| ||||||||||||    
T  9165 tttgaaaatgtgcaattttgatctaacttacttt 9198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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