View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0235-Insertion-19 (Length: 279)
Name: NF0235-Insertion-19
Description: NF0235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0235-Insertion-19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 7 - 279
Target Start/End: Complemental strand, 40985067 - 40984795
Alignment:
| Q |
7 |
attagatatataattcaggtgttgaattggagaacaatacaagcagcatacaagaaaactgcatctatgttttgtcctagttgatgatcattggttatat |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
40985067 |
attagatatataattcaggtgttgaattggagaacaatacaagcagcatacaagaaaactgcatctatgttttgtcctagttgacgatcattggttatat |
40984968 |
T |
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| Q |
107 |
gtttgtgatttttgaacaatgccttagactattatatgatttgatattaaagaaatattaaaaagtaattagctgtgggtctaccatttggtgccgacct |
206 |
Q |
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||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
40984967 |
gtttgtggtttttgaacaatgccttagactattatatggtttgatattaaagaaatattaaaaagtaattagccgtgggtctaccatttggtgccgacct |
40984868 |
T |
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| Q |
207 |
gtcacataattgaatttctcagaaataatgttgggagttctgatagaaccagtgacttttcagcgtttgttta |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40984867 |
gtcacataattgaatttctcagaaataatgttgggagttctgatagaaccagtgacttttcagcgtttgttta |
40984795 |
T |
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