View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0235Ase14 (Length: 426)
Name: NF0235Ase14
Description: NF0235-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0235Ase14 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 7 - 419
Target Start/End: Original strand, 5080623 - 5081037
Alignment:
| Q |
7 |
taataaaatattttacaatgtgtcaacttgttaataattataattgtttgactttgtaataacttcaagagacagagttcaaattctttcaaagaaggat |
106 |
Q |
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| T |
5080623 |
taataaaatattttacaatgtgtcaacttgttaata-ttataattgtttgactttgtaatagcttcaagagagagagttcaaattctttcaaagaaggat |
5080721 |
T |
|
| Q |
107 |
gtaaatcatttttggtacgggtctcaaatgatcgaaccaacct-caaagatttgtaaaaattgtttacacattgtgaaggatatgatttatggtactaga |
205 |
Q |
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| T |
5080722 |
gtaaatcatttttggtacgggtctcaaatgatcgaactaaccttcaaagatttgtaaaaattgtttacacattgcgaaggatatgatttatggtactaga |
5080821 |
T |
|
| Q |
206 |
cttgagggatgttattggagttggataagaaatttatttactttggaggttgatttgacgaatgagtgtaaagttttattgtccaacattcttttaca-- |
303 |
Q |
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| T |
5080822 |
cttgagggatgttgttggagttggataagaaatttatttactttggaggttgatttgatgaatgagtgtaaagttttatagtccaacgttcttttataag |
5080921 |
T |
|
| Q |
304 |
--agataatatggaagatacttgaacttgagatcttaattttaatggtatatattttagttaaagatgtttatgagttgatatttaattttaaagatatg |
401 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
5080922 |
atagataatatggaagatacttgaacttgagatcttaattttaatgg--catgatttagttaaagatgtttatgagttgatacctaattttaaagatatg |
5081019 |
T |
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| Q |
402 |
gtagaatccttttcatat |
419 |
Q |
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||||||||||||| |||| |
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| T |
5081020 |
gtagaatcctttttatat |
5081037 |
T |
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