View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0235Ase16 (Length: 140)
Name: NF0235Ase16
Description: NF0235-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0235Ase16
Alignment Details
Target: chr8 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 43032307 - 43032440
Alignment:
Q
7
taatcccacaatgacatttgatacataaaagagacgacacataatgtttt--------gagtagagatgtgacgtctcannnnnnngtggtcgagctttg
98
Q
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||
T
43032307
taatcccacaatgacatttgatacataaaagagatgacacataatgttttaaggttttgagtagagatgtgacgtctcatttttttgtggtcgagctttg
43032406
T
Q
99
gctagttgttgctctcgacgctctctatgtcttc
132
Q
| ||||||||||||||||||||||||||||||||
T
43032407
gttagttgttgctctcgacgctctctatgtcttc
43032440
T
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