View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0235Ase29 (Length: 83)
Name: NF0235Ase29
Description: NF0235-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0235Ase29 |
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Alignment Details
Target: chr5 (Bit Score: 71; Significance: 8e-33; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 71; E-Value: 8e-33
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 7663115 - 7663045
Alignment:
| Q |
7 |
aaaaagaatatactatactataatattatctcattagcatttttaacaaaacatttatccttgttccatta |
77 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7663115 |
aaaaagaatatactatactataatattatctcattagcatttttaacaaaacatttatccttgttccatta |
7663045 |
T |
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