View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0235Ase3 (Length: 327)

Name: NF0235Ase3
Description: NF0235-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0235Ase3
NF0235Ase3
[»] scaffold0224 (1 HSPs)
scaffold0224 (7-305)||(22424-22720)
[»] chr1 (32 HSPs)
chr1 (7-305)||(42835343-42835639)
chr1 (7-61)||(4838307-4838361)
chr1 (7-61)||(27552226-27552280)
chr1 (7-61)||(38824381-38824435)
chr1 (7-61)||(40328962-40329016)
chr1 (7-61)||(46812991-46813045)
chr1 (7-63)||(52253628-52253684)
chr1 (7-54)||(47011247-47011294)
chr1 (7-61)||(4838399-4838453)
chr1 (7-61)||(17988294-17988348)
chr1 (7-61)||(34061939-34061993)
chr1 (8-54)||(35050799-35050845)
chr1 (7-61)||(40341726-40341780)
chr1 (7-55)||(52253540-52253588)
chr1 (7-62)||(5852683-5852738)
chr1 (7-54)||(24478668-24478715)
chr1 (7-54)||(31909839-31909886)
chr1 (7-62)||(37255216-37255271)
chr1 (7-61)||(6763424-6763478)
chr1 (7-61)||(24023361-24023415)
chr1 (7-61)||(25378347-25378401)
chr1 (7-45)||(32914264-32914302)
chr1 (7-61)||(33324063-33324117)
chr1 (7-61)||(37255122-37255176)
chr1 (7-61)||(39181045-39181099)
chr1 (11-61)||(40094422-40094472)
chr1 (7-61)||(46518035-46518089)
chr1 (7-61)||(48376895-48376948)
chr1 (8-61)||(6669505-6669558)
chr1 (7-51)||(2091836-2091880)
chr1 (7-55)||(8751434-8751482)
chr1 (9-61)||(43384575-43384627)
[»] chr8 (25 HSPs)
chr8 (7-61)||(41178048-41178102)
chr8 (7-61)||(42631775-42631829)
chr8 (9-54)||(5419607-5419652)
chr8 (7-63)||(34194554-34194610)
chr8 (7-55)||(40716748-40716796)
chr8 (7-62)||(35972366-35972421)
chr8 (7-61)||(38883942-38883996)
chr8 (7-60)||(7256884-7256937)
chr8 (7-55)||(28464864-28464912)
chr8 (7-54)||(26492312-26492359)
chr8 (7-54)||(32484944-32484991)
chr8 (7-50)||(35969669-35969712)
chr8 (7-62)||(37922902-37922957)
chr8 (7-61)||(8568816-8568870)
chr8 (11-61)||(13832469-13832519)
chr8 (7-61)||(24726125-24726179)
chr8 (7-61)||(32480286-32480340)
chr8 (7-61)||(34188408-34188462)
chr8 (7-61)||(34194650-34194704)
chr8 (7-61)||(35969752-35969806)
chr8 (7-61)||(40802199-40802253)
chr8 (7-61)||(43484022-43484076)
chr8 (9-61)||(5419511-5419563)
chr8 (7-55)||(32241750-32241798)
chr8 (7-51)||(32485029-32485073)
[»] chr5 (44 HSPs)
chr5 (7-61)||(14571004-14571058)
chr5 (7-61)||(35969037-35969091)
chr5 (7-52)||(20367313-20367358)
chr5 (7-54)||(23994950-23994997)
chr5 (7-62)||(29255741-29255796)
chr5 (11-58)||(42486157-42486204)
chr5 (7-61)||(18942076-18942130)
chr5 (7-61)||(20361973-20362027)
chr5 (7-61)||(29807166-29807220)
chr5 (7-61)||(34102165-34102219)
chr5 (7-61)||(43585491-43585545)
chr5 (7-59)||(3161316-3161368)
chr5 (7-55)||(15577469-15577517)
chr5 (7-51)||(18941992-18942036)
chr5 (11-63)||(22474032-22474084)
chr5 (7-51)||(35969281-35969325)
chr5 (7-55)||(39916287-39916335)
chr5 (7-54)||(7336945-7336992)
chr5 (11-54)||(7581388-7581431)
chr5 (7-54)||(14416409-14416456)
chr5 (7-54)||(39916375-39916422)
chr5 (7-61)||(6638226-6638280)
chr5 (7-45)||(8409753-8409791)
chr5 (7-61)||(10832375-10832429)
chr5 (7-61)||(14064806-14064860)
chr5 (7-61)||(15965952-15966006)
chr5 (7-61)||(19784530-19784584)
chr5 (7-61)||(19784613-19784667)
chr5 (7-61)||(23118145-23118199)
chr5 (7-61)||(24433625-24433679)
chr5 (7-61)||(26168278-26168332)
chr5 (7-61)||(29112280-29112334)
chr5 (7-61)||(33696632-33696686)
chr5 (7-61)||(33696745-33696799)
chr5 (11-61)||(38007715-38007765)
chr5 (7-61)||(39126104-39126158)
chr5 (7-51)||(8409625-8409669)
chr5 (10-54)||(9985014-9985058)
chr5 (7-55)||(15966046-15966094)
chr5 (7-51)||(20207241-20207285)
chr5 (14-54)||(31210357-31210397)
chr5 (7-55)||(36792725-36792773)
chr5 (7-35)||(37554437-37554465)
chr5 (7-35)||(37685060-37685088)
[»] chr7 (24 HSPs)
chr7 (7-63)||(33471580-33471636)
chr7 (7-61)||(20353167-20353221)
chr7 (7-61)||(7344988-7345042)
chr7 (7-61)||(33471486-33471540)
chr7 (7-61)||(46470948-46471002)
chr7 (7-61)||(48590581-48590635)
chr7 (7-55)||(45833192-45833240)
chr7 (7-55)||(45833280-45833328)
chr7 (7-62)||(28003268-28003323)
chr7 (7-54)||(31758486-31758533)
chr7 (7-62)||(36711629-36711684)
chr7 (7-61)||(16086292-16086346)
chr7 (7-61)||(24211547-24211601)
chr7 (7-61)||(27042190-27042244)
chr7 (7-61)||(46658728-46658782)
chr7 (7-61)||(46658822-46658876)
chr7 (7-61)||(46774605-46774659)
chr7 (7-56)||(19531954-19532003)
chr7 (21-62)||(31758587-31758628)
chr7 (7-55)||(3498296-3498344)
chr7 (23-67)||(22526238-22526282)
chr7 (13-61)||(24936677-24936725)
chr7 (7-63)||(27940739-27940795)
chr7 (9-61)||(39970249-39970301)
[»] chr4 (35 HSPs)
chr4 (7-54)||(24331428-24331475)
chr4 (7-62)||(50038445-50038500)
chr4 (7-62)||(50045667-50045722)
chr4 (7-52)||(5289707-5289752)
chr4 (7-54)||(41788924-41788971)
chr4 (7-62)||(43635831-43635886)
chr4 (7-61)||(39754095-39754149)
chr4 (7-61)||(43087436-43087490)
chr4 (7-61)||(46779384-46779438)
chr4 (7-61)||(56420521-56420575)
chr4 (7-51)||(5048441-5048485)
chr4 (7-55)||(17028323-17028371)
chr4 (7-62)||(9968296-9968351)
chr4 (7-54)||(19754218-19754265)
chr4 (7-54)||(19785541-19785588)
chr4 (7-58)||(23329460-23329511)
chr4 (7-54)||(30016963-30017010)
chr4 (7-62)||(33379488-33379543)
chr4 (7-54)||(34827562-34827609)
chr4 (7-50)||(37306623-37306666)
chr4 (7-42)||(41551440-41551475)
chr4 (7-61)||(9968420-9968474)
chr4 (7-61)||(17659555-17659609)
chr4 (7-61)||(25856100-25856154)
chr4 (7-61)||(39754189-39754243)
chr4 (7-61)||(44496804-44496858)
chr4 (7-61)||(53508496-53508550)
chr4 (16-61)||(30016856-30016901)
chr4 (7-60)||(34458982-34459035)
chr4 (7-68)||(48902033-48902094)
chr4 (7-71)||(34166098-34166162)
chr4 (7-55)||(46779293-46779341)
chr4 (7-51)||(49573885-49573929)
chr4 (7-55)||(54569446-54569494)
chr4 (7-55)||(55501292-55501340)
[»] chr2 (39 HSPs)
chr2 (6-61)||(12440719-12440774)
chr2 (10-61)||(9709751-9709802)
chr2 (7-54)||(29771721-29771768)
chr2 (7-61)||(324792-324846)
chr2 (7-61)||(604853-604907)
chr2 (7-61)||(4898161-4898215)
chr2 (7-61)||(4898255-4898309)
chr2 (7-61)||(4945555-4945609)
chr2 (7-61)||(4945649-4945703)
chr2 (7-61)||(8218203-8218257)
chr2 (7-61)||(9157970-9158024)
chr2 (7-61)||(25668407-25668461)
chr2 (7-53)||(31211739-31211785)
chr2 (7-61)||(32473467-32473521)
chr2 (7-61)||(37486089-37486143)
chr2 (7-61)||(45123885-45123939)
chr2 (7-64)||(41145257-41145314)
chr2 (7-55)||(34240921-34240969)
chr2 (7-55)||(36490482-36490529)
chr2 (7-62)||(8218252-8218307)
chr2 (10-61)||(24971201-24971252)
chr2 (7-62)||(26567631-26567686)
chr2 (7-46)||(27743706-27743745)
chr2 (7-54)||(28680929-28680976)
chr2 (7-54)||(36490569-36490616)
chr2 (7-54)||(38262075-38262122)
chr2 (7-54)||(42579022-42579069)
chr2 (7-61)||(8382888-8382942)
chr2 (7-61)||(10041538-10041592)
chr2 (7-61)||(25668501-25668555)
chr2 (7-61)||(26269383-26269437)
chr2 (7-61)||(27327826-27327880)
chr2 (7-61)||(40340559-40340613)
chr2 (11-61)||(40669057-40669107)
chr2 (7-61)||(42579109-42579163)
chr2 (13-61)||(6006678-6006726)
chr2 (7-51)||(10041632-10041676)
chr2 (7-55)||(20195291-20195339)
chr2 (7-55)||(45095518-45095565)
[»] chr6 (13 HSPs)
chr6 (7-57)||(1858277-1858327)
chr6 (7-61)||(17854832-17854886)
chr6 (7-54)||(17181381-17181428)
chr6 (7-54)||(7418878-7418925)
chr6 (7-61)||(7246961-7247015)
chr6 (7-61)||(10731563-10731617)
chr6 (7-61)||(11989232-11989286)
chr6 (7-69)||(19687557-19687619)
chr6 (7-61)||(26295370-26295424)
chr6 (12-62)||(26575652-26575702)
chr6 (7-45)||(31577451-31577489)
chr6 (7-61)||(32786206-32786260)
chr6 (7-51)||(19687473-19687517)
[»] chr3 (31 HSPs)
chr3 (7-61)||(50623126-50623180)
chr3 (7-61)||(51256563-51256617)
chr3 (7-61)||(7672689-7672743)
chr3 (7-61)||(7933608-7933662)
chr3 (7-61)||(32998558-32998612)
chr3 (7-61)||(34935534-34935588)
chr3 (7-68)||(19679052-19679113)
chr3 (11-67)||(1927491-1927547)
chr3 (7-55)||(7672783-7672831)
chr3 (7-50)||(16294805-16294848)
chr3 (7-54)||(43898096-43898143)
chr3 (7-54)||(54680579-54680626)
chr3 (7-61)||(8126126-8126180)
chr3 (7-61)||(12569192-12569246)
chr3 (7-61)||(13545656-13545710)
chr3 (7-61)||(19678958-19679012)
chr3 (7-61)||(22995692-22995746)
chr3 (7-61)||(31267357-31267411)
chr3 (7-57)||(32589315-32589365)
chr3 (7-61)||(34205559-34205613)
chr3 (11-61)||(34413215-34413265)
chr3 (7-61)||(42595724-42595778)
chr3 (7-61)||(44435170-44435224)
chr3 (7-61)||(46739303-46739357)
chr3 (11-61)||(48126813-48126863)
chr3 (7-61)||(50623042-50623096)
chr3 (7-51)||(8126220-8126264)
chr3 (14-58)||(8126339-8126383)
chr3 (7-55)||(26043252-26043300)
chr3 (7-55)||(40760773-40760821)
chr3 (7-55)||(42595827-42595875)
[»] scaffold0011 (1 HSPs)
scaffold0011 (7-66)||(269-328)
[»] scaffold0635 (2 HSPs)
scaffold0635 (7-61)||(5478-5532)
scaffold0635 (7-51)||(5394-5438)
[»] scaffold0019 (1 HSPs)
scaffold0019 (7-61)||(45517-45571)
[»] scaffold0622 (1 HSPs)
scaffold0622 (7-55)||(375-423)
[»] scaffold0111 (1 HSPs)
scaffold0111 (7-55)||(38097-38145)
[»] scaffold0070 (1 HSPs)
scaffold0070 (7-55)||(42642-42690)


Alignment Details
Target: scaffold0224 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 7 - 305
Target Start/End: Complemental strand, 22720 - 22424
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtagattatttcaggtcatcctagatttatattggactaattttaaat 106  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  22720 taattaaatgaatctaaaaaataaaatttatttatatttagaaacggagatagtagattatttcaggtcatcctagatttatat--gactaattttaaat 22623  T
Q  107 aatttcatttatgttggggaattgcaatcatgaggcattgtttccgaaagatttaatactctaagccccaaaaagtttgtacagcttcagacaatcttgg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  22622 aatttcatttatgttggggaattgcaatcatgaggcattgtttccgaaagatttaataccctaagccccaaaaaatttgtacaacttcagacaatcttgg 22523  T
Q  207 ggtgcccaagaaatttatgaatatatgtaggcatataaaacacactctgatttgttttcgcaaagaaaaatgctatatatcgcgaatgaaaatcatccc 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22522 ggtggccaagaaatttatgaatatatgtaggcatataaaacacactctgatttgtttccgcaaagaaaaatgctatatatcgcgaatgaaaatcatccc 22424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 256; Significance: 1e-142; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 7 - 305
Target Start/End: Complemental strand, 42835639 - 42835343
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtagattatttcaggtcatcctagatttatattggactaattttaaat 106  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  42835639 taattaaatgaatctaaaaaataaaatttatttatatttagaaacggagatagtagattatttcaggtcatcctagatttatat--gactaattttaaat 42835542  T
Q  107 aatttcatttatgttggggaattgcaatcatgaggcattgtttccgaaagatttaatactctaagccccaaaaagtttgtacagcttcagacaatcttgg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  42835541 aatttcatttatgttggggaattgcaatcatgaggcattgtttccgaaagatttaataccctaagccccaaaaaatttgtacaacttcagacaatcttgg 42835442  T
Q  207 ggtgcccaagaaatttatgaatatatgtaggcatataaaacacactctgatttgttttcgcaaagaaaaatgctatatatcgcgaatgaaaatcatccc 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42835441 ggtggccaagaaatttatgaatatatgtaggcatataaaacacactctgatttgtttccgcaaagaaaaatgctatatatcgcgaatgaaaatcatccc 42835343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 4838361 - 4838307
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||| |||||    
T  4838361 taattgaatgaacctaaaaagtaaaatttgtttatatttagaaacggagggagta 4838307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 27552280 - 27552226
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||    
T  27552280 taattgaatgaacctaaaaaataaaatttgtttatattttgaaacggagggagta 27552226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 38824381 - 38824435
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  38824381 taattgaatgaatctaaaacgtaaaatttgtttatatttagaaacggagggagta 38824435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 40328962 - 40329016
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||||| |||||    
T  40328962 taattgaatgaatctaaaaagtaaaatttgtttatatttaaaaacggagggagta 40329016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 46812991 - 46813045
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||||||| |||||    
T  46812991 taattgaatgaatttaaaaaataaaatttgtttatatttacaaacggagggagta 46813045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 52253628 - 52253684
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtaga 63  Q
    ||||||||||||| |||||||||||||||  ||||||||| |||||||| |||||||    
T  52253628 taattgaatgaatttaaaaaataaaatttacttatatttaaaaacggagggagtaga 52253684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 47011294 - 47011247
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  47011294 taattgaatgaacctaaaaagtaaaatttgtttatatttagaaacgga 47011247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 4838399 - 4838453
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| |||| || |||||||| ||||||||||||||||||| |||||    
T  4838399 taattgaatgaacctaagaagtaaaatttgtttatatttagaaacggagggagta 4838453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 17988294 - 17988348
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| |||||||| ||||||||| ||||||||| |||||    
T  17988294 taattgaatgaacctaaaaagtaaaatttgtttatattttgaaacggagggagta 17988348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 34061993 - 34061939
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| |||||||| |||||||||| |||||||| |||||    
T  34061993 taattgaatgaacctaaaaagtaaaatttgtttatatttaaaaacggagggagta 34061939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 35050845 - 35050799
Alignment:
Q  8 aattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  35050845 aattgaatgaacctaaaaaatcaaatttatttatatttagaaacgga 35050799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 40341780 - 40341726
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||  |||||||| ||||||||||||||||||| |||||    
T  40341780 taattgaatgaacctaaaatgtaaaatttgtttatatttagaaacggagggagta 40341726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 52253588 - 52253540
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||||    
T  52253588 taattgaatgaatataaaaagtaaaatttgcttatatttagaaacggag 52253540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 5852738 - 5852683
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| ||||||    
T  5852738 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtag 5852683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 24478715 - 24478668
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| || |||||||||||||  |||||||||||||||||    
T  24478715 taattgaatgaacctcaaaaataaaatttacttatatttagaaacgga 24478668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 31909839 - 31909886
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||||||||||||  |||||||| ||||||||    
T  31909839 taattgaatgaacctaaaaaataaaatttgcttatattttgaaacgga 31909886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 37255216 - 37255271
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||| ||||||| ||| ||||  |||||||||||||||||| ||||||    
T  37255216 taattgaatgaacctaaaaagtaatatttgcttatatttagaaacggagggagtag 37255271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 6763424 - 6763478
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  6763424 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 6763478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 24023415 - 24023361
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||| || |||||||||||| |||  |||||||||||||||||| |||||    
T  24023415 taattgaataaacctaaaaaataaattttgcttatatttagaaacggagggagta 24023361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 25378347 - 25378401
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||||||||||  ||||||||  |||||||| |||||    
T  25378347 taattgaatgaacctaaaaaataaaatttgcttatattttaaaacggagggagta 25378401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 32914264 - 32914302
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatattt 45  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  32914264 taattgaatgaatctaaaaaataaaatttacttatattt 32914302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 33324117 - 33324063
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| | |||||| ||||||||| ||||||||| |||||    
T  33324117 taattgaatgaacctaaaaagtgaaatttgtttatattttgaaacggagggagta 33324063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 37255176 - 37255122
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  ||||||| | |||||||| |||||    
T  37255176 taattgaatgaatctaaaaagtaaaatttgcttatattaaaaaacggagggagta 37255122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 39181099 - 39181045
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  |||||||| || |||||| |||||    
T  39181099 taattgaatgaatctaaaaagtaaaatttgcttatattttgagacggagggagta 39181045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 40094422 - 40094472
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||| || |||  |||||||||||||||||| |||||    
T  40094422 tgaatgaatctaaaaaatgaattttgcttatatttagaaacggagggagta 40094472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 46518035 - 46518089
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  46518035 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 46518089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 48376895 - 48376948
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| | ||||||  |||||||||||||| |||||||||    
T  48376895 taattgaatgaatctaaaaagtcaaatttgcttatatttagaaac-gagagagta 48376948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 6669558 - 6669505
Alignment:
Q  8 aattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||| |||||||||||| |||  |||||||| ||||||||| |||||    
T  6669558 aattgaatgaacctaaaaaataaattttgcttatattttgaaacggagggagta 6669505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 2091836 - 2091880
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    |||||||||||| ||||||| ||||||||  ||||||||||||||    
T  2091836 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaac 2091880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 8751482 - 8751434
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||||||||||||  ||||||||  ||||||||    
T  8751482 taattgaatgaacctaaaaaataaaatttgcttatattttaaaacggag 8751434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 43384575 - 43384627
Alignment:
Q  9 attgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||||||| |||||||||  ||||||| | |||||||| |||||    
T  43384575 attgaatgaatctaaaagataaaatttgcttatattaaaaaacggagggagta 43384627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 41178048 - 41178102
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  41178048 taattgaatgaatctaaaaagtcaaatttgtttatatttagaaacggagagagta 41178102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 42631829 - 42631775
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||| |||||    
T  42631829 taattgaatgaatctaaaaagtaaaatttgcttatatttagaaacggagggagta 42631775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 5419607 - 5419652
Alignment:
Q  9 attgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||    
T  5419607 attgaatgaacctaaaaaataaaatttgtttatatttagaaacgga 5419652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 34194610 - 34194554
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtaga 63  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||| |||||||    
T  34194610 taattgaatgaatctaaaaagtaaaatttgcttatattttgaaacggagggagtaga 34194554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 40716796 - 40716748
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  40716796 taattgaatgaatctaaaaagtaaaatttgcttatatttagaaacggag 40716748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 35972421 - 35972366
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||||||||||| | |||||| ||||||||||||| ||||| ||||||    
T  35972421 taattgaatgaatctaaaaagtcaaatttatttatatttagaatcggagggagtag 35972366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 38883996 - 38883942
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||||||||||  |||||||| ||||||||| |||||    
T  38883996 taattgaatgaacctaaaaaataaaatttgcttatattttgaaacggagggagta 38883942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 7256937 - 7256884
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagt 60  Q
    |||||||||||||||||||| |||||||| |||||||||  |||||||| ||||    
T  7256937 taattgaatgaatctaaaaagtaaaatttgtttatatttcaaaacggagggagt 7256884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 28464864 - 28464912
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||||||||||||  |||||||| |||||||||    
T  28464864 taattgaatgaacctaaaaaataaaatttgcttatattttgaaacggag 28464912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 26492359 - 26492312
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||||| || ||| ||||||||||||||||||    
T  26492359 taattgaatgaacctaaaaaatcaattttgtttatatttagaaacgga 26492312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 32484991 - 32484944
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||    
T  32484991 taattgaatgaatctaaaaagtaaaatttgcttatattttgaaacgga 32484944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 35969712 - 35969669
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaa 50  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||    
T  35969712 taattgaatgaacctaaaaattaaaatttgtttatatttagaaa 35969669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 37922902 - 37922957
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| ||||||    
T  37922902 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtag 37922957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 8568870 - 8568816
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| |||||||| ||||||||| ||||| || ||||||    
T  8568870 taattgaatgaacctaaaaagtaaaatttgtttatattttgaaacagaaagagta 8568816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 13832519 - 13832469
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||||||||||| |||  |||||||| ||||||||| |||||    
T  13832519 tgaatgaatctaaaaaataaattttacttatattttgaaacggagggagta 13832469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 24726125 - 24726179
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||| ||||  ||||||||||||||||| ||||||    
T  24726125 taattgaatgaacctaaaaagtaatatttgcttatatttagaaacggatagagta 24726179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 32480286 - 32480340
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  32480286 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 32480340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 34188408 - 34188462
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| |||||||| ||||||||||  ||||||| |||||    
T  34188408 taattgaatgaacctaaaaagtaaaatttatttatatttaagaacggagggagta 34188462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 34194650 - 34194704
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  34194650 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 34194704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 35969752 - 35969806
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  ||||||||||| |||||| |||||    
T  35969752 taattgaatgaacctaaaaagtaaaatttacttatatttagatacggagggagta 35969806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 40802253 - 40802199
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||  |||||| ||||||||  |||||||||||||||||| |||||    
T  40802253 taattgaatgaacttaaaaagtaaaatttgcttatatttagaaacggagggagta 40802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 43484022 - 43484076
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  ||||||||| |||||||| |||||    
T  43484022 taattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagggagta 43484076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 5419563 - 5419511
Alignment:
Q  9 attgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||| ||||||||||||||||  ||||||||| ||||| || |||||    
T  5419563 attgaatgaacctaaaaaataaaatttgcttatatttaaaaacgaagggagta 5419511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 32241798 - 32241750
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||| |||||||| ||||||||||  |||||||    
T  32241798 taattgaatgaacctaaaaagtaaaatttgtttatatttaagaacggag 32241750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 32485029 - 32485073
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    ||||| |||||| ||||||||||||||||  ||||||||||||||    
T  32485029 taattaaatgaacctaaaaaataaaatttgattatatttagaaac 32485073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 14571058 - 14571004
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  14571058 taattgaatgaatctaaaaaataaaatttgcttatatttagaaacggagggagta 14571004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 35969091 - 35969037
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  35969091 taattaaatgaatctaaaaagtaaaatttgtttatatttagaaacggatagagta 35969037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 20367358 - 20367313
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacg 52  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  20367358 taattgaatgaatctaaaaagtaaaatttgtttatatttagaaacg 20367313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 23994997 - 23994950
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  23994997 taattgaatgaacctaaaaaataaaatttgtttatattttgaaacgga 23994950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 29255741 - 29255796
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||| ||||||    
T  29255741 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagtag 29255796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 42486204 - 42486157
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacggagaga 58  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||    
T  42486204 tgaatgaatctaaaaaataaaattttcttatattttgaaacggagaga 42486157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 18942076 - 18942130
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||||||||||  ||||||||||| |||||| |||||    
T  18942076 taattgaatgaacctaaaaaataaaatttgcttatatttagatacggagggagta 18942130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 20362027 - 20361973
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  ||||||||| |||||||| |||||    
T  20362027 taattgaatgaatctaaaaagtaaaatttgcttatatttaaaaacggagggagta 20361973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 29807166 - 29807220
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  ||||||| |||||||||| |||||    
T  29807166 taattgaatgaatctaaaaagtaaaatttgcttatattaagaaacggagggagta 29807220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 34102165 - 34102219
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||  |||| ||| ||||||||||||||||||| |||||    
T  34102165 taattgaatgaatctaaaaggtaaattttgtttatatttagaaacggagggagta 34102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 43585545 - 43585491
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| |||||||| |||||||||| |||||||| |||||    
T  43585545 taattgaatgaacctaaaaagtaaaatttgtttatatttaaaaacggagggagta 43585491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 3161316 - 3161368
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagag 59  Q
    |||||||||||| ||||||| ||||||||  ||||||||| ||||||||||||    
T  3161316 taattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagagag 3161368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 15577517 - 15577469
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||||    
T  15577517 taattaaataaatctagaaaataaaatttgtttatatttagaaacggag 15577469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 18942036 - 18941992
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||    
T  18942036 taattgaatgaacctaaaaagtaaaatttgtttatatttagaaac 18941992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 22474032 - 22474084
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtaga 63  Q
    |||||||||||||||||| || |||  |||||||||||||||||| |||||||    
T  22474032 tgaatgaatctaaaaaatgaattttgcttatatttagaaacggagggagtaga 22474084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 35969281 - 35969325
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    |||||||||| | |||||||||||||||| |||||||||||||||    
T  35969281 taattgaatggacctaaaaaataaaatttgtttatatttagaaac 35969325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 39916335 - 39916287
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    ||||| |||||||||||||| ||||||||  ||||||||||||||||||    
T  39916335 taattaaatgaatctaaaaagtaaaatttacttatatttagaaacggag 39916287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 7336945 - 7336992
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||    
T  7336945 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 7336992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 7581431 - 7581388
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||| ||||||||  |||||||||||||||||    
T  7581431 tgaatgaatctaaaaagtaaaatttgcttatatttagaaacgga 7581388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 14416456 - 14416409
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||||||||||||  ||||||||  |||||||    
T  14416456 taattgaatgaatctaaaaaataaaatttgcttatattttaaaacgga 14416409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 39916375 - 39916422
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||    
T  39916375 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 39916422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 6638280 - 6638226
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  ||||||||| |||||||| |||||    
T  6638280 taattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagggagta 6638226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 8409753 - 8409791
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatattt 45  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  8409753 taattgaatgaatctaaaaagtaaaatttatttatattt 8409791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 10832429 - 10832375
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  ||||||||  ||||||||||||||    
T  10832429 taattgaatgaagctaaaaagtaaaatttacttatattttaaaacggagagagta 10832375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 14064860 - 14064806
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  ||||||||| |||||||| |||||    
T  14064860 taattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggagggagta 14064806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 15966006 - 15965952
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  15966006 taattgaatgaacctaaaaagtaaaatttacttatattttgaaacggagtgagta 15965952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 19784584 - 19784530
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  19784584 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 19784530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 19784613 - 19784667
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  19784613 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 19784667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 23118199 - 23118145
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| |||||||||||||||| |||||| |||| ||| ||| |||||    
T  23118199 taattgaatgaacctaaaaaataaaatttgtttataattagtaacagagggagta 23118145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 24433625 - 24433679
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||||||||||  ||||||||  |||||||| |||||    
T  24433625 taattgaatgaacctaaaaaataaaatttacttatattttaaaacggagtgagta 24433679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 26168278 - 26168332
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  26168278 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 26168332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 29112334 - 29112280
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||||||||||  ||||| ||| |||||||| |||||    
T  29112334 taattgaatgaacctaaaaaataaaatttgcttataattaaaaacggagggagta 29112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 33696686 - 33696632
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||| || ||||||| |||||||| ||||||||| || ||||||||||||    
T  33696686 taattgaataaacctaaaaagtaaaatttatttatattttgagacggagagagta 33696632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 33696745 - 33696799
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  33696745 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 33696799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 38007765 - 38007715
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||| ||||||||| || |||  ||||||||||||||||||||||||    
T  38007765 tgaatgaacctaaaaaatcaattttgattatatttagaaacggagagagta 38007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 39126104 - 39126158
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  |||||||| | ||||||| |||||    
T  39126104 taattgaatgaatctaaaaagtaaaatttgcttatattttggaacggagggagta 39126158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 8409669 - 8409625
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||    
T  8409669 taattgaatgaatctaaaaagtaaaatttacttatattttgaaac 8409625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 9985014 - 9985058
Alignment:
Q  10 ttgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    ||||||||||||||||||| ||||||  ||||| |||||||||||    
T  9985014 ttgaatgaatctaaaaaatcaaatttacttataattagaaacgga 9985058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 15966046 - 15966094
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||| ||||||||  |||||||| |||||||||    
T  15966046 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggag 15966094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 20207241 - 20207285
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    ||||||||||||||||||||||||| |||  ||||||||| ||||    
T  20207241 taattgaatgaatctaaaaaataaattttacttatatttaaaaac 20207285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 31210357 - 31210397
Alignment:
Q  14 atgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    ||||||||||||| |||||||| |||||||||| |||||||    
T  31210357 atgaatctaaaaagtaaaatttgtttatatttaaaaacgga 31210397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 36792725 - 36792773
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||||||||||| ||||||||  ||||||||  ||||||||    
T  36792725 taattgaatgaatctaaaaagtaaaatttacttatattttaaaacggag 36792773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 37554437 - 37554465
Alignment:
Q  7 taattgaatgaatctaaaaaataaaattt 35  Q
    |||||||||||||||||||||||||||||    
T  37554437 taattgaatgaatctaaaaaataaaattt 37554465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 37685060 - 37685088
Alignment:
Q  7 taattgaatgaatctaaaaaataaaattt 35  Q
    |||||||||||||||||||||||||||||    
T  37685060 taattgaatgaatctaaaaaataaaattt 37685088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 33471580 - 33471636
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtaga 63  Q
    |||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||    
T  33471580 taattgaatgaacctaaaaaataaaatttacttatattttgaaacggagagagtaga 33471636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 20353167 - 20353221
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||| |||||    
T  20353167 taattgaatgaatctaaaaagtaaaatttgattatatttagaaacggagggagta 20353221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7344988 - 7345042
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||| |||||    
T  7344988 taattgaatgaaactaaaaagtaaaatttgcttatatttagaaacggagggagta 7345042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 33471540 - 33471486
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||||||||||||  |||||||| || |||||| |||||    
T  33471540 taattgaatgaatctaaaaaataaaatttgcttatattttgagacggagggagta 33471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 46471002 - 46470948
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||  |||||||| ||||||||| ||||||||| |||||    
T  46471002 taattgaatgaatctaaaacctaaaatttgtttatattttgaaacggagggagta 46470948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 48590635 - 48590581
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||| ||||||| |||||||| ||||||||||||||||||| |||||    
T  48590635 taatttaatgaacctaaaaagtaaaatttgtttatatttagaaacggagggagta 48590581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 45833240 - 45833192
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  45833240 taattgaatgaacctaaaaagtaaaatttgtttatatttaaaaacggag 45833192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 45833280 - 45833328
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||||||||||| ||||||||  ||||||||| ||||||||    
T  45833280 taattgaatgaatctaaaaagtaaaatttgcttatatttaaaaacggag 45833328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 28003268 - 28003323
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| ||||||    
T  28003268 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtag 28003323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 31758533 - 31758486
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    ||||||||| |||||||||  |||||||| ||||||||||||||||||    
T  31758533 taattgaataaatctaaaatgtaaaatttgtttatatttagaaacgga 31758486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 36711629 - 36711684
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||| || |||| |||||||| |||||||||| |||||||| ||||||    
T  36711629 taattgaatgaaccttaaaagtaaaatttatttatatttaaaaacggagggagtag 36711684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 16086292 - 16086346
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||||||||||  ||||||||  | ||||||||||||    
T  16086292 taattgaatgaacctaaaaaataaaatttgcttatattttaagacggagagagta 16086346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 24211601 - 24211547
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  |||||||| || |||||| |||||    
T  24211601 taattgaatgaatctaaaaagtaaaatttacttatattttgagacggagggagta 24211547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 27042190 - 27042244
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| | |||||| ||||||||| | ||||||| |||||    
T  27042190 taattgaatgaatctaaaaagtcaaatttatttatattttggaacggagggagta 27042244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 46658782 - 46658728
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  ||||||||  ||||||||||||||    
T  46658782 taattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggagagagta 46658728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 46658822 - 46658876
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  ||||||||  |||||||| |||||    
T  46658822 taattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagggagta 46658876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 46774605 - 46774659
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||  ||||||||  |||||||||||||||||| |||||    
T  46774605 taattgaatgaacctaaaaggtaaaatttacttatatttagaaacggagggagta 46774659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 19532003 - 19531954
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggaga 56  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||||    
T  19532003 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggaga 19531954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 31758587 - 31758628
Alignment:
Q  21 taaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||||||  |||||||||||||||||| ||||||    
T  31758587 taaaaaataaaatttacttatatttagaaacggagggagtag 31758628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 3498344 - 3498296
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||||||||||| ||||||||  ||||||||  ||||||||    
T  3498344 taattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggag 3498296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 22526282 - 22526238
Alignment:
Q  23 aaaaataaaatttctttatatttagaaacggagagagtagattat 67  Q
    ||||||||| ||| ||||||||||||||||||| ||||| |||||    
T  22526282 aaaaataaattttgtttatatttagaaacggagggagtatattat 22526238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 24936725 - 24936677
Alignment:
Q  13 aatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||| || |||  ||||||||| ||||||||||||||    
T  24936725 aatgaatctaaaaaatcaattttgcttatatttaaaaacggagagagta 24936677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 27940795 - 27940739
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtaga 63  Q
    |||||||||||| ||||||||||||||||  ||||||||  |||||||  |||||||    
T  27940795 taattgaatgaacctaaaaaataaaatttgcttatattttaaaacggaaggagtaga 27940739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 39970249 - 39970301
Alignment:
Q  9 attgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||| |||||| |||||||| |||||||| | |||||||| |||||    
T  39970249 attgaatgaatttaaaaattaaaatttgtttatattaaaaaacggagggagta 39970301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 24331475 - 24331428
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||    
T  24331475 taattgaatgaatctaaaaaataaaatttgcttatatttagaaacgga 24331428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 50038500 - 50038445
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||| ||||||    
T  50038500 taattgaatgaatctaaaaagtaaaatttgcttatatttagaaacggagggagtag 50038445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 50045722 - 50045667
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||| ||||||    
T  50045722 taattgaatgaatctaaaaagtaaaatttgcttatatttagaaacggagggagtag 50045667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 5289752 - 5289707
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacg 52  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  5289752 taattgaatgaatctaaaaagtaaaatttatttatatttagaaacg 5289707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 41788971 - 41788924
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||    
T  41788971 taattgaatgaacctaaaaaataaaatttgcttatatttagaaacgga 41788924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 43635886 - 43635831
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||| ||||||    
T  43635886 taattgaatgaatctaaaaagtaaaattttcttatattttgaaacggagggagtag 43635831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 39754149 - 39754095
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||| || ||||||| ||||||||  ||||||||||||||||||||||||    
T  39754149 taattgaataaacctaaaaagtaaaatttgcttatatttagaaacggagagagta 39754095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 43087490 - 43087436
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||  ||||||||||||||| |||||||||||||| |||| |||||    
T  43087490 taattgaatgaacataaaaaataaaatttgtttatatttagaaatggagggagta 43087436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 46779384 - 46779438
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||||||||||||||||||||  ||||||||| |||||||| |||||    
T  46779384 taattaaatgaatctaaaaaataaaatttgcttatatttaaaaacggagggagta 46779438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 56420521 - 56420575
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||| |||||    
T  56420521 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 56420575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 5048485 - 5048441
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||    
T  5048485 taattaaatgaatctaaaaaataaaatttgtttatatttaaaaac 5048441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 17028323 - 17028371
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||||||||    
T  17028323 taattgaatgaacctaaaaagtaaaatttgtttatattttgaaacggag 17028371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 9968351 - 9968296
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||| ||||||| ||||||||  ||||||||| |||||||| ||||||    
T  9968351 taattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggagggagtag 9968296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 19754265 - 19754218
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||    
T  19754265 taattgaatgaatctaaaaagtaaaatttacttatattttgaaacgga 19754218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 19785541 - 19785588
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||    
T  19785541 taattgaatgaatctaaaaagtaaaatttacttatattttgaaacgga 19785588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 23329460 - 23329511
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagaga 58  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||||||    
T  23329460 taattgaatgaacctaaaaagtaaaatttacttatattttgaaacggagaga 23329511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 30016963 - 30017010
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||| ||||| ||  |||||||||||||||||    
T  30016963 taattgaatgaatctaaaaactaaaaattgcttatatttagaaacgga 30017010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 33379488 - 33379543
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||| ||||||| | |||||| ||||||||||| ||||||| ||||||    
T  33379488 taattgaatgaacctaaaaagtgaaatttgtttatatttaggaacggagggagtag 33379543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 34827562 - 34827609
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||||||||| ||  ||||||||| |||||||    
T  34827562 taattgaatgaatctaaaaaataaaacttgcttatatttaaaaacgga 34827609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 37306666 - 37306623
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaa 50  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||    
T  37306666 taattgaatgaacctaaaaagtaaaatttatttatatttagaaa 37306623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 41551440 - 41551475
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttata 42  Q
    ||||||||||||| ||||||||||||||||||||||    
T  41551440 taattgaatgaatttaaaaaataaaatttctttata 41551475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 9968420 - 9968474
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||  |||||||||||||||  ||||||||| |||||||| |||||    
T  9968420 taattgaatgaacataaaaaataaaatttgcttatatttaaaaacggagggagta 9968474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 17659555 - 17659609
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  |||||||| || |||||| |||||    
T  17659555 taattgaatgaatctaaaaagtaaaatttgcttatattttgagacggagggagta 17659609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 25856100 - 25856154
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  25856100 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 25856154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 39754189 - 39754243
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||| ||||||||||||||||  ||||||||| ||||||| ||||||    
T  39754189 taattaaatgaacctaaaaaataaaatttgcttatatttaaaaacggaaagagta 39754243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 44496858 - 44496804
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||||||||||  ||||||||| ||| |||| |||||    
T  44496858 taattgaatgaacctaaaaaataaaatttgcttatatttaaaaatggagggagta 44496804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 53508550 - 53508496
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||  ||||||| ||||||||  |||||||||||||||||| |||||    
T  53508550 taattgaatgagcctaaaaagtaaaatttgcttatatttagaaacggagggagta 53508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 30016901 - 30016856
Alignment:
Q  16 gaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||| |||||||||||||||  |||||||||||||||||| |||||    
T  30016901 gaatttaaaaaataaaatttgcttatatttagaaacggagggagta 30016856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 34459035 - 34458982
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagt 60  Q
    |||||||||||| ||||||||| ||||||  ||||| |||||||||||| ||||    
T  34459035 taattgaatgaacctaaaaaatcaaatttacttataattagaaacggagggagt 34458982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 48902094 - 48902033
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtagattatt 68  Q
    |||||||||||||||| ||  ||||||||  ||||||||| |||||||||| ||||| ||||    
T  48902094 taattgaatgaatctagaagttaaaatttgcttatatttaaaaacggagagtgtagactatt 48902033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 34166162 - 34166098
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtagattatttca 71  Q
    |||||||||||| ||||||| | || |||  |||||||||||||||||| |||||| || |||||    
T  34166162 taattgaatgaacctaaaaagtcaattttgcttatatttagaaacggagggagtagtttttttca 34166098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 46779341 - 46779293
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    ||||||||||||  |||||| |||||||| |||||||||||| ||||||    
T  46779341 taattgaatgaacttaaaaagtaaaatttgtttatatttagatacggag 46779293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 49573929 - 49573885
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    |||||||||||||||| ||| ||||||||  ||||||||||||||    
T  49573929 taattgaatgaatctataaagtaaaatttgcttatatttagaaac 49573885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 54569446 - 54569494
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||||| || |||  ||||||||||||||||||    
T  54569446 taattgaatgaacctaaaaaattaattttgcttatatttagaaacggag 54569494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 55501292 - 55501340
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||| ||||||||  ||||||||| ||||||||    
T  55501292 taattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggag 55501340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 12440719 - 12440774
Alignment:
Q  6 ctaattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||    
T  12440719 ctaattgaatgaacttaaaaaataaaatttatttgtatttagaaacggagagagta 12440774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 9709751 - 9709802
Alignment:
Q  10 ttgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||| |||||    
T  9709751 ttgaatgaaactgaaaaataaaatttgtttatatttagaaacggagggagta 9709802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 29771768 - 29771721
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  29771768 taattgaatgaatctaaaaagtaaaatttgtttatattttgaaacgga 29771721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 324846 - 324792
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||  |||||| ||||||||  ||||||||||||||||||||||||    
T  324846 taattgaatgaacttaaaaagtaaaatttgcttatatttagaaacggagagagta 324792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 604907 - 604853
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||||||||||||  ||||| |||||||| ||| |||||    
T  604907 taattgaatgaatctaaaaaataaaatttgcttataattagaaacagagtgagta 604853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 4898215 - 4898161
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||| |||||    
T  4898215 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 4898161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 4898255 - 4898309
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| || |||| |||||||| ||||||||||||||||||| |||||    
T  4898255 taattgaatgaacctcaaaagtaaaatttgtttatatttagaaacggagggagta 4898309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 4945609 - 4945555
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||| |||||    
T  4945609 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 4945555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 4945649 - 4945703
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| || |||| |||||||| ||||||||||||||||||| |||||    
T  4945649 taattgaatgaacctcaaaagtaaaatttgtttatatttagaaacggagggagta 4945703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 8218257 - 8218203
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||| |||||||||||||||| |||||||||||||| |||| |||||    
T  8218257 taattaaatgaacctaaaaaataaaatttgtttatatttagaaatggagggagta 8218203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 9158024 - 9157970
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||| ||||||||||| ||||||||  |||||||||||||||||| |||||    
T  9158024 taattgaaagaatctaaaaagtaaaatttgcttatatttagaaacggagggagta 9157970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 25668461 - 25668407
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| |||||||  ||||||| ||||||||||||||||||| |||||    
T  25668461 taattgaatgaacctaaaaagcaaaatttgtttatatttagaaacggagggagta 25668407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 31211785 - 31211739
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgg 53  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||    
T  31211785 taattgaatgaatctaaaaagtaaaatttgcttatatttagaaacgg 31211739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 32473521 - 32473467
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||||||||||||  ||||||||| ||| |||| |||||    
T  32473521 taattgaatgaatctaaaaaataaaatttgcttatatttaaaaatggagggagta 32473467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 37486089 - 37486143
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||| |||||    
T  37486089 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 37486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 45123885 - 45123939
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||| |||||    
T  45123885 taattgaatgaacctaaaaagtaaaatttacttatatttagaaacggagggagta 45123939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 41145314 - 41145257
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtagat 64  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||| |||| ||||||||    
T  41145314 taattgaatgaacctaaaaagtaaaatttgtttatattttgaaatggagggagtagat 41145257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 34240921 - 34240969
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||||||||||||  |||||||||| |||||||    
T  34240921 taattgaatgaacctaaaaaataaaatttacttatatttaggaacggag 34240969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 36490529 - 36490482
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||||    
T  36490529 taattgaatgaatctaaaaattaaaa-ttatttatatttagaaacggag 36490482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 8218252 - 8218307
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    ||||| ||| || |||||||||||||||| |||||||||| |||| ||||||||||    
T  8218252 taattaaataaacctaaaaaataaaatttgtttatatttataaacagagagagtag 8218307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 24971252 - 24971201
Alignment:
Q  10 ttgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||||||| ||||||||  |||||||| ||||||||| |||||    
T  24971252 ttgaatgaatctaaaaagtaaaatttgcttatattttgaaacggagggagta 24971201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 26567686 - 26567631
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| ||||||    
T  26567686 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagtag 26567631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 27743706 - 27743745
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatattta 46  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  27743706 taattgaatgaatctaaaaagtaaaatttatttatattta 27743745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 28680929 - 28680976
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    ||||||||||||||||||||  ||||||| |||||||||| |||||||    
T  28680929 taattgaatgaatctaaaaagaaaaatttgtttatatttaaaaacgga 28680976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 36490569 - 36490616
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||    
T  36490569 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 36490616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 38262075 - 38262122
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||||||||||||  ||||||||| |||||||    
T  38262075 taattgaatgaacctaaaaaataaaatttgcttatatttaaaaacgga 38262122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 42579069 - 42579022
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    ||||| ||||||| |||||| |||||||| ||||||||||||||||||    
T  42579069 taattaaatgaatttaaaaagtaaaatttatttatatttagaaacgga 42579022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 8382888 - 8382942
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||||||||||  |||||||| || |||||| |||||    
T  8382888 taattgaatgaacctaaaaaataaaatttacttatattttgagacggagggagta 8382942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 10041592 - 10041538
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||||||||||  ||||||||  |||||||||||||||||| |||||    
T  10041592 taattaaatgaatctaaaatgtaaaattttcttatatttagaaacggagggagta 10041538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 25668501 - 25668555
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||| ||||||| ||||||||  |||||||||||||||||| |||||    
T  25668501 taattaaatgaacctaaaaagtaaaatttgcttatatttagaaacggagggagta 25668555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 26269383 - 26269437
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| ||||||||||||| |||||||||  ||||||||||||| |||| |||||    
T  26269383 taattaaatgaatctaaaatataaaatttgcttatatttagaaatggagggagta 26269437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 27327880 - 27327826
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| |||||||| ||||||||| | ||||||| |||||    
T  27327880 taattgaatgaacctaaaaagtaaaatttgtttatattttggaacggagggagta 27327826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 40340559 - 40340613
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  40340559 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 40340613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 40669057 - 40669107
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||| |||| |||  |||||||||||||||||| |||||    
T  40669057 tgaatgaatctaaaaagtaaattttgcttatatttagaaacggagggagta 40669107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 42579109 - 42579163
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  ||||||||| ||| |||| |||||    
T  42579109 taattgaatgaatctaaaaagtaaaatttacttatatttaaaaatggagggagta 42579163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 6006726 - 6006678
Alignment:
Q  13 aatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||| | || ||| |||||||||| ||||||||||||||    
T  6006726 aatgaatctaaaaagtcaattttatttatatttaaaaacggagagagta 6006678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 10041632 - 10041676
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    ||||||||||||  |||||| |||||||| |||||||||||||||    
T  10041632 taattgaatgaacttaaaaagtaaaatttatttatatttagaaac 10041676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 20195339 - 20195291
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||||||||||| ||||||||  ||||||||  ||||||||    
T  20195339 taattgaatgaatctaaaaagtaaaatttacttatattttaaaacggag 20195291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 45095565 - 45095518
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  45095565 taattgaatgaacctaaaaa-taaaatttgtttatatttaaaaacggag 45095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 1858327 - 1858277
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagag 57  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  1858327 taattgaatgaatccaaaaaataaaatttgcttatatttagaaacggagag 1858277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 17854886 - 17854832
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||||||||||||||||||| |||||||||| ||| |||| |||||    
T  17854886 taattgaatgaatctaaaaaataaaatttgtttatatttaaaaatggagggagta 17854832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 17181381 - 17181428
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||||    
T  17181381 taattgaatgaatctaaaaagtaaaatttgtttatatttaaaaacgga 17181428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 7418925 - 7418878
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||| ||||||||  |||||||||||||||||    
T  7418925 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 7418878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7246961 - 7247015
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||| || ||| |||||||||| ||||||||| ||||    
T  7246961 taattgaatgaacctaaaaaattaattttatttatatttaaaaacggagatagta 7247015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 10731563 - 10731617
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  10731563 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 10731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 11989232 - 11989286
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  11989232 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 11989286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 19687557 - 19687619
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtagattattt 69  Q
    |||||||||||| ||||||| ||||||||   |||||||| |||||||| ||||| |||||||    
T  19687557 taattgaatgaacctaaaaagtaaaatttgcatatatttaaaaacggagggagtaaattattt 19687619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 26295424 - 26295370
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||| ||||||||||||| |||||||| ||||||||| ||||| ||| |||||    
T  26295424 taattgcatgaatctaaaaagtaaaatttgtttatattttgaaacagagggagta 26295370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 26575702 - 26575652
Alignment:
Q  12 gaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtag 62  Q
    ||||||||||||||||| || ||| |||||||||| |||||||| ||||||    
T  26575702 gaatgaatctaaaaaatcaattttgtttatatttaaaaacggagggagtag 26575652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 31577489 - 31577451
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatattt 45  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  31577489 taattgaatgaatctaaaaaataaaatttgcttatattt 31577451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 32786206 - 32786260
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  32786206 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 32786260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 19687517 - 19687473
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    |||||||||||| ||||||| ||||||||  ||||||||||||||    
T  19687517 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaac 19687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 50623126 - 50623180
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||| |||||    
T  50623126 taattgaatgaatctaaaaaataaaatttgcttatattttgaaacggagggagta 50623180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 51256617 - 51256563
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||| |||||    
T  51256617 taattgaatgaacctaaaaagtaaaatttgtttatatttagaaacggagggagta 51256563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 7672743 - 7672689
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||| |||||    
T  7672743 taattgaatgaatctaaaaagtaaaattttcttatattttgaaacggagggagta 7672689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7933608 - 7933662
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| |||||||||||||||    
T  7933608 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagagagta 7933662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 32998558 - 32998612
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| |||||||||||||||    
T  32998558 taattgaatgaacctaaaaattaaaatttgcttatattttgaaacggagagagta 32998612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 34935588 - 34935534
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  ||||||||| ||||||||||||||    
T  34935588 taattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggagagagta 34935534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 19679052 - 19679113
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtagattatt 68  Q
    ||||||||||||  |||||| ||||||||  |||||||||||||||||| ||||| ||||||    
T  19679052 taattgaatgaacttaaaaagtaaaatttgcttatatttagaaacggagggagtatattatt 19679113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 1927547 - 1927491
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtagattat 67  Q
    ||||||||  ||||||||||| |||  |||||||||||||||||||||||| |||||    
T  1927547 tgaatgaacttaaaaaataaattttacttatatttagaaacggagagagtatattat 1927491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 7672783 - 7672831
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||    
T  7672783 taattgaatgaatctaaaaagtaaaattttcttatattttgaaacggag 7672831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 16294848 - 16294805
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaa 50  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||    
T  16294848 taattgaatgaacctaaaaaataaaatttgtttatattttgaaa 16294805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 43898143 - 43898096
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||||||||||| ||||||||  ||||||||| |||||||    
T  43898143 taattgaatgaatctaaaaagtaaaatttgcttatatttaaaaacgga 43898096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 54680579 - 54680626
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacgga 54  Q
    |||||||||||| ||||||||||||||||  |||||||| ||||||||    
T  54680579 taattgaatgaacctaaaaaataaaatttgcttatattttgaaacgga 54680626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 8126180 - 8126126
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||||||||||| ||||||||  |||||||| ||||||||| |||||    
T  8126180 taattaaatgaatctaaaaagtaaaatttgcttatattttgaaacggagggagta 8126126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 12569192 - 12569246
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  ||||||||  |||||||| |||||    
T  12569192 taattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagggagta 12569246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 13545656 - 13545710
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||| ||||||||  ||||||||  |||||||| |||||    
T  13545656 taattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagggagta 13545710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 19679012 - 19678958
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||  ||||||||  |||||||||||||||||| |||||    
T  19679012 taattgaatgaacctaaaaggtaaaatttgcttatatttagaaacggagggagta 19678958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 22995746 - 22995692
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||| ||||||| ||||||||  |||||||||||||||||| |||||    
T  22995746 taattaaatgaacctaaaaagtaaaatttacttatatttagaaacggagggagta 22995692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 31267357 - 31267411
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||||||||||||| || |||  |||||||||||| ||||| |||||    
T  31267357 taattgaatgaatctaaaaaatcaattttgcttatatttagaagcggagggagta 31267411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 32589365 - 32589315
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagag 57  Q
    |||||||||||||||||||| | ||||||  |||||||| |||||||||||    
T  32589365 taattgaatgaatctaaaaagtcaaatttgcttatattttgaaacggagag 32589315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 34205613 - 34205559
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  |||||||| ||||||||| |||||    
T  34205613 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaacggagggagta 34205559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 34413215 - 34413265
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||||||||||| |||  |||||||| ||||||||| |||||    
T  34413215 tgaatgaatctaaaaaataaattttgcttatattttgaaacggagggagta 34413265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 42595778 - 42595724
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| |||||||| |||||||||  |||||||| |||||    
T  42595778 taattgaatgaacctaaaaagtaaaatttgtttatattttaaaacggagggagta 42595724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 44435224 - 44435170
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||||||||||||  |||||||| || |||||| |||||    
T  44435224 taattgaatgaacctaaaaaataaaatttgcttatattttgagacggagggagta 44435170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 46739357 - 46739303
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||||||| ||||||| ||||||||  | |||||||||||||||| |||||    
T  46739357 taattgaatgaacctaaaaagtaaaatttgctcatatttagaaacggagggagta 46739303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 48126813 - 48126863
Alignment:
Q  11 tgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    |||||||| |||||||||||| |||  |||||||||||||||||| |||||    
T  48126813 tgaatgaacctaaaaaataaattttacttatatttagaaacggagggagta 48126863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 50623096 - 50623042
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||||||||||  |||||| |||||||| ||||||||| ||||||||| |||||    
T  50623096 taattgaatgaacgtaaaaagtaaaatttgtttatattttgaaacggagggagta 50623042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 8126220 - 8126264
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    |||||||||||| ||||||||||||||||  |||||||| |||||    
T  8126220 taattgaatgaacctaaaaaataaaatttgcttatattttgaaac 8126264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 8126383 - 8126339
Alignment:
Q  14 atgaatctaaaaaataaaatttctttatatttagaaacggagaga 58  Q
    ||||| ||||||| |||||||| ||||||||| ||||||||||||    
T  8126383 atgaacctaaaaagtaaaatttgtttatattttgaaacggagaga 8126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 26043300 - 26043252
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    ||||| |||||||||||||| ||||||||  ||||||||| ||||||||    
T  26043300 taattcaatgaatctaaaaagtaaaatttacttatatttaaaaacggag 26043252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 40760821 - 40760773
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||||| || |||  ||||||||||||||||||    
T  40760821 taattgaatgaacctaaaaaatcaattttacttatatttagaaacggag 40760773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 42595827 - 42595875
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||||||||||| ||||||||  ||||||||  ||||||||    
T  42595827 taattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggag 42595875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 269 - 328
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagtagatta 66  Q
    |||||||||||| ||||||| ||||||||  |||||||| |||| |||||||||| ||||    
T  269 taattgaatgaacctaaaaagtaaaatttgcttatattttgaaatggagagagtacatta 328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 5478 - 5532
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| |||||||||||||  ||||||||  |||||||||||||||||| |||||    
T  5478 taattaaatgaatctaaaatgtaaaattttcttatatttagaaacggagggagta 5532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 5438 - 5394
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaac 51  Q
    ||||||||||||  |||||| |||||||| |||||||||||||||    
T  5438 taattgaatgaacttaaaaagtaaaatttatttatatttagaaac 5394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 45571 - 45517
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggagagagta 61  Q
    ||||| ||||||  |||||| ||||||||  ||||||||||||||||||||||||    
T  45571 taattaaatgaacttaaaaagtaaaatttacttatatttagaaacggagagagta 45517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 375 - 423
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    ||||| |||||| |||||||||||||||| |||||||||  ||||||||    
T  375 taattaaatgaacctaaaaaataaaatttgtttatattttaaaacggag 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 38097 - 38145
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||| ||||||||  ||||||||||||| ||||    
T  38097 taattgaatgaacctaaaaagtaaaatttgcttatatttagaaatggag 38145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 42690 - 42642
Alignment:
Q  7 taattgaatgaatctaaaaaataaaatttctttatatttagaaacggag 55  Q
    |||||||||||| ||||||| ||||||||  ||||||||||||| ||||    
T  42690 taattgaatgaacctaaaaagtaaaatttacttatatttagaaatggag 42642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1070 times since January 2019
Visitors: 2388