View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0235_1D_high_13 (Length: 325)
Name: NF0235_1D_high_13
Description: NF0235_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0235_1D_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 78 - 321
Target Start/End: Original strand, 7309865 - 7310108
Alignment:
| Q |
78 |
tccttcgtctccttcgagaatgatatgaagcttgattgttgttggaagcaagaagagcttttcgaaccgaaaaaaggagagtttgaaacttcattcggtg |
177 |
Q |
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| T |
7309865 |
tccttcgtctccttcgagaatgatatgaagcttgattgttgttggaagcaagaagagcttttcgaaccgaaaaaaggagagtttgaaacttcattcggtg |
7309964 |
T |
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| Q |
178 |
ataactagagtaagttgaacggagatggtcgacgatatcatcagcagtggagaatcttgatttgcatgaatcgattcgacggagtagggtttgttggaga |
277 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7309965 |
ataactagagtaagttgaacggagatggtcgacgatatcatcagcagtggagaatcttgatttgcatgaatcgattcgacggagtagggtttgttggaga |
7310064 |
T |
|
| Q |
278 |
aacctttctcttcctcctcctcctccgcttgttcttaccatctc |
321 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7310065 |
aacctttctcttcctcctcctcctccgcttgttcttaccatctc |
7310108 |
T |
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