View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0235_low_9 (Length: 501)

Name: NF0235_low_9
Description: NF0235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0235_low_9
NF0235_low_9
[»] chr2 (27 HSPs)
chr2 (7-493)||(43168781-43169269)
chr2 (174-397)||(43219019-43219242)
chr2 (7-142)||(43195675-43195811)
chr2 (7-142)||(3976232-3976368)
chr2 (7-142)||(3977080-3977216)
chr2 (1-142)||(7877735-7877877)
chr2 (6-142)||(3976547-3976683)
chr2 (7-142)||(21213962-21214098)
chr2 (1-134)||(18901935-18902069)
chr2 (1-142)||(21214272-21214414)
chr2 (7-145)||(6183443-6183589)
chr2 (7-142)||(23054217-23054353)
chr2 (1-142)||(30166150-30166292)
chr2 (7-142)||(17509000-17509136)
chr2 (5-142)||(42768407-42768545)
chr2 (394-493)||(43219319-43219418)
chr2 (7-142)||(5424833-5424969)
chr2 (7-145)||(11968942-11969079)
chr2 (7-142)||(25441587-25441723)
chr2 (1-126)||(15820172-15820298)
chr2 (7-142)||(10849568-10849704)
chr2 (7-142)||(43688498-43688635)
chr2 (70-142)||(3976827-3976900)
chr2 (22-81)||(18183419-18183478)
chr2 (19-72)||(3003996-3004049)
chr2 (19-80)||(11339785-11339846)
chr2 (7-44)||(15061342-15061379)
[»] chr5 (28 HSPs)
chr5 (7-143)||(13843587-13843724)
chr5 (7-142)||(13843904-13844040)
chr5 (1-136)||(20811351-20811487)
chr5 (1-136)||(20837706-20837842)
chr5 (1-142)||(1028164-1028305)
chr5 (19-142)||(27760282-27760406)
chr5 (7-142)||(17016170-17016304)
chr5 (7-141)||(27759967-27760102)
chr5 (1-145)||(37995705-37995850)
chr5 (7-142)||(873773-873908)
chr5 (7-142)||(28010193-28010329)
chr5 (1-142)||(12595183-12595316)
chr5 (19-142)||(24993963-24994087)
chr5 (19-142)||(24918055-24918179)
chr5 (7-143)||(38131657-38131791)
chr5 (7-142)||(28009874-28010010)
chr5 (23-81)||(4796311-4796369)
chr5 (19-81)||(31973523-31973585)
chr5 (6-142)||(17435314-17435451)
chr5 (19-81)||(904842-904904)
chr5 (7-53)||(30588038-30588084)
chr5 (21-67)||(31973216-31973262)
chr5 (19-51)||(4464971-4465003)
chr5 (19-51)||(29432395-29432427)
chr5 (19-51)||(38663230-38663262)
chr5 (19-74)||(15844313-15844368)
chr5 (7-53)||(4465262-4465308)
chr5 (110-144)||(30588226-30588260)
[»] chr4 (50 HSPs)
chr4 (7-142)||(50857903-50858039)
chr4 (7-142)||(53740073-53740209)
chr4 (7-142)||(50858219-50858355)
chr4 (1-143)||(52214505-52214648)
chr4 (1-142)||(990930-991070)
chr4 (7-142)||(15665043-15665180)
chr4 (7-143)||(29734451-29734588)
chr4 (7-142)||(45427013-45427149)
chr4 (19-142)||(45427341-45427465)
chr4 (7-142)||(32988347-32988483)
chr4 (1-142)||(29669434-29669575)
chr4 (1-99)||(991139-991237)
chr4 (1-142)||(29669749-29669890)
chr4 (7-142)||(53739748-53739893)
chr4 (1-142)||(53738279-53738421)
chr4 (1-105)||(990476-990580)
chr4 (7-142)||(23018361-23018497)
chr4 (7-142)||(43972246-43972382)
chr4 (7-137)||(56509504-56509636)
chr4 (7-148)||(43971924-43972066)
chr4 (7-142)||(36558543-36558679)
chr4 (7-145)||(51469374-51469508)
chr4 (54-142)||(990732-990821)
chr4 (7-143)||(48843094-48843231)
chr4 (7-142)||(22866975-22867111)
chr4 (6-142)||(49544226-49544360)
chr4 (77-142)||(17222783-17222849)
chr4 (7-81)||(51470435-51470510)
chr4 (7-59)||(13254358-13254410)
chr4 (52-142)||(18862548-18862642)
chr4 (1-53)||(34206065-34206117)
chr4 (22-81)||(30491043-30491102)
chr4 (1-53)||(34206327-34206379)
chr4 (1-48)||(17222737-17222784)
chr4 (24-74)||(42788090-42788140)
chr4 (17-140)||(46332620-46332744)
chr4 (22-75)||(26942679-26942732)
chr4 (45-81)||(44898837-44898873)
chr4 (23-75)||(52043171-52043223)
chr4 (19-81)||(54595150-54595212)
chr4 (7-44)||(7193660-7193697)
chr4 (22-75)||(26942464-26942517)
chr4 (7-44)||(27048485-27048522)
chr4 (45-81)||(3137748-3137784)
chr4 (8-44)||(21497761-21497797)
chr4 (8-44)||(21498177-21498213)
chr4 (22-74)||(23311562-23311613)
chr4 (13-53)||(32784382-32784422)
chr4 (8-44)||(38908107-38908143)
chr4 (8-44)||(41176696-41176732)
[»] chr3 (34 HSPs)
chr3 (1-145)||(45443168-45443313)
chr3 (7-142)||(54368930-54369066)
chr3 (1-142)||(27219220-27219362)
chr3 (7-142)||(44573217-44573353)
chr3 (1-142)||(41380615-41380757)
chr3 (24-142)||(44573846-44573965)
chr3 (1-142)||(4256125-4256267)
chr3 (1-142)||(13769362-13769504)
chr3 (1-142)||(4255401-4255543)
chr3 (2-142)||(34715527-34715668)
chr3 (7-142)||(43101448-43101584)
chr3 (6-142)||(44573533-44573667)
chr3 (1-122)||(50203928-50204050)
chr3 (11-142)||(48685398-48685531)
chr3 (22-142)||(24860152-24860273)
chr3 (1-143)||(14170070-14170213)
chr3 (7-108)||(47833739-47833839)
chr3 (1-144)||(46139122-46139265)
chr3 (7-91)||(3985716-3985800)
chr3 (17-142)||(662619-662743)
chr3 (19-142)||(34250441-34250564)
chr3 (52-140)||(9658193-9658282)
chr3 (17-75)||(54861484-54861542)
chr3 (23-80)||(31603931-31603988)
chr3 (96-142)||(4255761-4255808)
chr3 (96-142)||(4255943-4255990)
chr3 (19-112)||(351103-351198)
chr3 (77-142)||(3985618-3985684)
chr3 (1-51)||(24539136-24539186)
chr3 (7-44)||(21750465-21750502)
chr3 (23-63)||(31606402-31606442)
chr3 (8-44)||(34356987-34357023)
chr3 (8-44)||(48407837-48407873)
chr3 (21-53)||(50095087-50095119)
[»] chr7 (37 HSPs)
chr7 (7-142)||(257344-257480)
chr7 (1-142)||(43167964-43168106)
chr7 (7-142)||(40121695-40121831)
chr7 (9-142)||(41670759-41670893)
chr7 (1-142)||(1661262-1661404)
chr7 (1-142)||(1663676-1663817)
chr7 (7-142)||(7135320-7135456)
chr7 (19-142)||(28909923-28910047)
chr7 (47-142)||(40122043-40122139)
chr7 (1-142)||(30296520-30296662)
chr7 (7-142)||(41670475-41670610)
chr7 (50-140)||(29780352-29780443)
chr7 (20-75)||(41709977-41710032)
chr7 (27-142)||(3973052-3973167)
chr7 (2-139)||(8584999-8585123)
chr7 (19-81)||(32000770-32000832)
chr7 (21-142)||(10193467-10193588)
chr7 (23-80)||(29780101-29780158)
chr7 (23-81)||(10406679-10406737)
chr7 (21-142)||(23721035-23721156)
chr7 (7-51)||(37272122-37272166)
chr7 (19-142)||(41389199-41389321)
chr7 (26-81)||(30610902-30610957)
chr7 (19-81)||(14092272-14092334)
chr7 (19-81)||(14402290-14402352)
chr7 (25-71)||(39079724-39079770)
chr7 (19-81)||(41387483-41387545)
chr7 (19-139)||(422750-422869)
chr7 (45-81)||(14092016-14092052)
chr7 (45-81)||(14402034-14402070)
chr7 (7-51)||(43288247-43288291)
chr7 (7-50)||(6960043-6960086)
chr7 (20-79)||(12305146-12305205)
chr7 (19-68)||(16015498-16015547)
chr7 (1-53)||(31149039-31149090)
chr7 (1-53)||(31167331-31167382)
chr7 (19-74)||(46870273-46870329)
[»] chr8 (27 HSPs)
chr8 (1-142)||(18905747-18905889)
chr8 (7-142)||(21653217-21653354)
chr8 (7-137)||(21653700-21653831)
chr8 (19-142)||(36997057-36997181)
chr8 (1-142)||(21085219-21085361)
chr8 (9-144)||(31766890-31767026)
chr8 (7-142)||(32931297-32931428)
chr8 (19-142)||(20298605-20298729)
chr8 (7-142)||(23027905-23028041)
chr8 (29-142)||(3184002-3184116)
chr8 (7-142)||(23027582-23027718)
chr8 (8-144)||(40754333-40754471)
chr8 (4-142)||(22277415-22277554)
chr8 (19-81)||(30590401-30590463)
chr8 (23-81)||(44933174-44933232)
chr8 (20-81)||(28488422-28488483)
chr8 (19-142)||(38886993-38887116)
chr8 (7-53)||(36994009-36994055)
chr8 (19-80)||(26639065-26639126)
chr8 (19-53)||(34248340-34248374)
chr8 (23-83)||(25971377-25971437)
chr8 (7-53)||(34248057-34248104)
chr8 (22-81)||(39590651-39590709)
chr8 (51-81)||(21653547-21653577)
chr8 (19-53)||(27402202-27402236)
chr8 (8-44)||(43984122-43984158)
chr8 (8-44)||(43984394-43984430)
[»] chr6 (30 HSPs)
chr6 (1-142)||(24055180-24055322)
chr6 (7-142)||(1408902-1409038)
chr6 (1-142)||(10418409-10418551)
chr6 (1-143)||(19054383-19054526)
chr6 (1-142)||(10733509-10733651)
chr6 (7-142)||(21067134-21067270)
chr6 (7-142)||(1744919-1745055)
chr6 (1-140)||(21043852-21043992)
chr6 (7-142)||(21088925-21089061)
chr6 (19-142)||(19753693-19753817)
chr6 (1-142)||(8143909-8144050)
chr6 (7-140)||(22911251-22911385)
chr6 (1-137)||(28068490-28068626)
chr6 (1-142)||(12134554-12134696)
chr6 (7-140)||(22889645-22889779)
chr6 (1-142)||(30539126-30539268)
chr6 (7-142)||(22874920-22875056)
chr6 (7-140)||(17096775-17096910)
chr6 (1-142)||(31944-32084)
chr6 (20-143)||(32215798-32215922)
chr6 (21-143)||(9602078-9602200)
chr6 (22-142)||(1205956-1206076)
chr6 (23-81)||(32216175-32216233)
chr6 (19-142)||(1205639-1205762)
chr6 (24-81)||(130761-130819)
chr6 (19-53)||(26809254-26809288)
chr6 (20-53)||(11160394-11160427)
chr6 (20-53)||(11198975-11199008)
chr6 (19-75)||(9156190-9156246)
chr6 (19-75)||(18286845-18286901)
[»] chr1 (32 HSPs)
chr1 (1-142)||(31305602-31305744)
chr1 (1-142)||(17419678-17419820)
chr1 (7-142)||(19937120-19937256)
chr1 (7-142)||(20735413-20735549)
chr1 (1-128)||(8520164-8520292)
chr1 (7-142)||(35926299-35926434)
chr1 (7-142)||(45264554-45264690)
chr1 (7-144)||(4022202-4022340)
chr1 (37-142)||(8520342-8520448)
chr1 (1-142)||(33879849-33879991)
chr1 (1-142)||(33964264-33964406)
chr1 (7-142)||(2697408-2697544)
chr1 (23-142)||(15013416-15013536)
chr1 (1-81)||(43423232-43423312)
chr1 (19-142)||(19459615-19459738)
chr1 (1-83)||(37600822-37600905)
chr1 (19-142)||(6868025-6868148)
chr1 (19-142)||(41590317-41590439)
chr1 (19-64)||(51188903-51188948)
chr1 (23-81)||(34626867-34626925)
chr1 (45-81)||(14623160-14623196)
chr1 (22-81)||(51515667-51515727)
chr1 (19-74)||(12410365-12410420)
chr1 (19-81)||(19811100-19811162)
chr1 (19-61)||(41590621-41590663)
chr1 (7-44)||(2104337-2104374)
chr1 (20-81)||(40566356-40566417)
chr1 (8-44)||(463228-463264)
chr1 (19-75)||(18998670-18998726)
chr1 (23-99)||(33248423-33248499)
chr1 (23-99)||(33268595-33268671)
chr1 (110-142)||(37600788-37600820)
[»] scaffold0054 (1 HSPs)
scaffold0054 (7-140)||(11104-11238)
[»] scaffold0099 (1 HSPs)
scaffold0099 (19-142)||(30582-30710)


Alignment Details
Target: chr2 (Bit Score: 437; Significance: 0; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 7 - 493
Target Start/End: Complemental strand, 43169269 - 43168781
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43169269 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 43169170  T
Q  107 ctaggg-cggaccgcaattaaggtggaatttccaacattacctatattccattaattttatttttt-catttggttattaagatagaatgaaatcgatga 204  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  43169169 ctaggggcggaccgcaattaaggcggaatttccaacattacctatattccattaattttatttttttcgtttggttattaagatagaatgaaatcgatga 43169070  T
Q  205 cattttgttttgttgtgaaggaaacctgcctacacattggttggttcttgtgatggcattctacccacaaggtgtttctagagttgtcttactcatcaag 304  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43169069 cattttgttttgttgtgaaggaaatctgcctacacattggttggttcttatgatggcattctgcccacaaggtgtttctagagttgtcttactcatcaag 43168970  T
Q  305 ctatgaactaagcttatttttgtggttataatccatgatagcatataaactaagcttaaacaattgaaatgcaaagacatcaccgcacacaaagtcaaag 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  43168969 ctatgaactaagcttatttttgtggttataatccatgatagcatataaactaagcttaaacaactgaaatgcaaagacatcaccgcacacaaagtcgaag 43168870  T
Q  405 tatactggtagaagatcagaactactgctcaatagagtactagaatgcttggcttgaacaactaacttgatgcctaaacaattcatctc 493  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43168869 tatactggtagaagatcagaactactgctcaatagagtacaagaatgcttggcttgaacaactaacttgatgcctaaacaattcatctc 43168781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 174 - 397
Target Start/End: Original strand, 43219019 - 43219242
Alignment:
Q  174 tttggttattaagatagaatgaaatcgatgacattttgttttgttgtgaaggaaacctgcctacacattggttggttcttgtgatggcattctacccaca 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  43219019 tttggttattaagatagaatgaaatcgatgacattttgttttgttgtgaaggaaatctgcctacacattggttggttcttatgatggcattctgcccaca 43219118  T
Q  274 aggtgtttctagagttgtcttactcatcaagctatgaactaagcttatttttgtggttataatccatgatagcatataaactaagcttaaacaattgaaa 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43219119 aggtgtttctagagttgtcttactcatcaagctatgaactaagcttatttttgtggttataatccatgatagcatataaactaagcttaaacaatttaaa 43219218  T
Q  374 tgcaaagacatcaccgcacacaaa 397  Q
    ||||||||||||||||||||||||    
T  43219219 tgcaaagacatcaccgcacacaaa 43219242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 43195811 - 43195675
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43195811 tatctatctgatgtgggactaaatctaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 43195712  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  43195711 ctaggggcggaccgcaattaaggcggaatttccaaca 43195675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 3976232 - 3976368
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3976232 tatctatccgatgtgggactaaatccaccccctcaaagccaacataatgaaggtgttggaggctgcaattaaggctaactgaaggtcgcaatttaggcga 3976331  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||| ||||||||||| |||||||||||    
T  3976332 ctaggggcggaccacaattaaggtgaaatttccaaca 3976368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 3977080 - 3977216
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  3977080 tatctatccgatgtgggactaaatccaccccctcagagccaacacaatgaaggtgttagaggctgcaattaaggctaaccgaaggatgcaatttaggcga 3977179  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  3977180 ctaggggcggaccgcaattaaggcggaatttccaaca 3977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7877877 - 7877735
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  7877877 gagtgctatctatccgatgtaggactaaatccaccccctcaaagccaacacaatgaagatgttggagactgcaatgaaggctaaccgaaggtcgcaattt 7877778  T
Q  101 aggcgactaggg-cggaccgcaattaaggtggaatttccaaca 142  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  7877777 aggcgactagggacggaccgcaattaaagcggaatttccaaca 7877735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 6 - 142
Target Start/End: Original strand, 3976547 - 3976683
Alignment:
Q  6 ttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcg 105  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  3976547 ttatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaa-tgaaggtcgcaatttaggcg 3976645  T
Q  106 acta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    | || ||| ||||||| |||||||||||||||||||||    
T  3976646 attaggggtggaccgcgattaaggtggaatttccaaca 3976683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 21213962 - 21214098
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  21213962 tatctatccaatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggcggcaattaaggctaaccaaagatcgcaatttaggcga 21214061  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||| ||||||||| |||||||||||||    
T  21214062 ctaggggcggaccacaattaaggcggaatttccaaca 21214098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18901935 - 18902069
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||    
T  18901935 gagtcttatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaagatcgcaattt 18902034  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaat 134  Q
    ||||||||| ||||||||| ||||||||| |||||    
T  18902035 aggcgactaggggcggaccacaattaaggcggaat 18902069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21214272 - 21214414
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||| ||||||    
T  21214272 gagtgctatctatctaatgtgggactaaatccaccccctcaaagccaacacaatgaaggttttggaggcggcaattaaggctaaccaaaggtcacaattt 21214371  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  21214372 aggcgactaggggcggaccgcaattaaggcggaatttccaaca 21214414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 6183443 - 6183589
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggag-------gctgcaattaaggctaaccgaaggtcgcaatt 99  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  6183443 tatctatccgatgtgggattaaatccaccccctcaaagccaacacaatgaaggtgttggagcctagaggctgcaattaaggctaaccgaaggtcgcaatt 6183542  T
Q  100 taggcgactaggg-cggaccgcaattaaggtggaatttccaacatta 145  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  6183543 taggcgactagggacggaccacaattaaggcggaatttccaacatta 6183589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 23054353 - 23054217
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||    
T  23054353 tatctatctgatgtgggactaaatccaccccctcaaagccaacacattgaaggtgttggaggctgcaattaaagctaaccaaaggtcgcaatttagacga 23054254  T
Q  107 ct-agggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||  |||| ||||||||||||||||||||||||||||    
T  23054253 ctccgggcagaccgcaattaaggtggaatttccaaca 23054217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 30166150 - 30166292
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||| ||||||| ||||||||||||     
T  30166150 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacatagtgaaggtgttggagactgcaattaaagctaaccaaaggtcgcaatta 30166249  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||    
T  30166250 aggcgactaggggcggaccacaattaaggcggaatttccaaca 30166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 17509136 - 17509000
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  17509136 tatctatctgatgtggggctaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaattaaggcga 17509037  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    | | |||||||| |||||||||| |||||||||||||    
T  17509036 cgaggggcggactgcaattaaggcggaatttccaaca 17509000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 42768407 - 42768545
Alignment:
Q  5 gttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggc 104  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| |||  ||||||||| |||||||||| |||||||||||||||||    
T  42768407 gttatctatccgatgtgggactaaattcacctcctcaaagccaacacaatgaaggtattgttggctgcaatgaaggctaaccaaaggtcgcaatttaggc 42768506  T
Q  105 gacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||| ||||| ||||||||||||| |||||||||||||    
T  42768507 gactaggggcgaaccgcaattaaggcggaatttccaaca 42768545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 394 - 493
Target Start/End: Original strand, 43219319 - 43219418
Alignment:
Q  394 caaagtcaaagtatactggtagaagatcagaactactgctcaatagagtactagaatgcttggcttgaacaactaacttgatgcctaaacaattcatctc 493  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43219319 caaagtcaaagtatacgggtagaagatcaaaactactgctcaatagagtactagaatgcttggcttgaacaactaacttgatgcgtaaacaattcatctc 43219418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 5424833 - 5424969
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||  |||| |||| ||||||||||||||    
T  5424833 tatctatccgatgtgggactaaacccaccctctcaaaggcaacacaatgaaggtgttggaggctgcaatgaaggaaaaccaaaggccgcaatttaggcga 5424932  T
Q  107 ctaggg-cggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||  |||| ||||||||||||||||||||||||    
T  5424933 ctagggaaggacagcaattaaggtggaatttccaaca 5424969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 11969079 - 11968942
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||  |||||||||| |||||| ||||||||||||    
T  11969079 tatctatccgacgtgggactaaatccaccccctca--gccaacacaatgaaggtgctggaggctgcaacgaaggctaacccaaggtcacaatttaggcga 11968982  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaacatta 145  Q
    ||| |||||||| |||||||||| ||||||||||| ||||    
T  11968981 ctaggggcggactgcaattaaggcggaatttccaatatta 11968942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 25441723 - 25441587
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||||||||||||| |||||  ||||||||||||| ||||| |||||||||||||| |||||||||| |||| ||||||||||||||    
T  25441723 tatctatctgatgtgggactaaatccaaccccttgaagccaacacaatcaaggtattggaggctgcaatgaaggctaaccaaaggccgcaatttaggcga 25441624  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||||||||||||| ||||||||||||||||||    
T  25441623 ctaggggcggaccgcaataaaggtggaatttccaaca 25441587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 15820172 - 15820298
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||     
T  15820172 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaataaaggcaaaccaaaggccgcaatta 15820271  T
Q  101 aggcga-ctagggcggaccgcaattaa 126  Q
    |||| | |  |||||||||||||||||    
T  15820272 aggcaaccgggggcggaccgcaattaa 15820298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 10849568 - 10849704
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||||| || || || | || | ||||||| |||| |    
T  10849568 tatctatctgaagtggaactaaatccacgcccacaaagccaacacaatgaaggtgttggcggctgcaatgaaagcaaatcaaaagccgcaattaaggcaa 10849667  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||||||||||||| |||| |||||||||||||    
T  10849668 ctaggggcggaccgcaataaaggcggaatttccaaca 10849704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 43688498 - 43688635
Alignment:
Q  7 tatctatccgaagtgggactaaatcca-ccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcg 105  Q
    ||||||||||| ||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| | |||| |||| ||||||||| |||    
T  43688498 tatctatccgatgtgagattaaatccatccccctcaaagccaacataatgaaggtgttggaggctgcaatgaagacaaaccaaaggccgcaatttaagcg 43688597  T
Q  106 actag-ggcggaccgcaattaaggtggaatttccaaca 142  Q
    || || || |||||||||| |||  | |||||||||||    
T  43688598 accagaggtggaccgcaataaagtcgaaatttccaaca 43688635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 3976827 - 3976900
Alignment:
Q  70 tgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| | |||||||||||||    
T  3976827 tgcaattaaggctaaccgaaggtcgcaatgtaggcgactaggggcggatcgcaattaaagcggaatttccaaca 3976900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 18183478 - 18183419
Alignment:
Q  22 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    |||||||||||| ||| ||| | ||||||||||||||||||||||||||||||| |||||    
T  18183478 ggactaaatccatcccatcacacccaacacaatgaaggtgttggaggctgcaatgaaggc 18183419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 3003996 - 3004049
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgc 72  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||    
T  3003996 gtgggactaaacccatcccctcacacccaacacaatgaaggtgttggaggctgc 3004049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 11339785 - 11339846
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 80  Q
    ||||||||||||||||||  ||  | | ||||||||||||||||||||||||||||| ||||    
T  11339785 gtgggactaaatccaccctttcgcacctaacacaatgaaggtgttggaggctgcaataaagg 11339846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 15061342 - 15061379
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaag 44  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  15061342 tatctaaccgatgtgggactaaatccaccccctcaaag 15061379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 5e-60; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 13843724 - 13843587
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13843724 tatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 13843625  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaacat 143  Q
    ||| ||||||||||||||||||| ||||||||||||||    
T  13843624 ctaggggcggaccgcaattaaggcggaatttccaacat 13843587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 13844040 - 13843904
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13844040 tatctatcagatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 13843941  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||| |||||||||||||||||||||||    
T  13843940 ctaggggcggaccacaattaaggtggaatttccaaca 13843904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 20811487 - 20811351
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  20811487 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtcggaattt 20811388  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaattt 136  Q
    ||||||||| ||||||||||| ||||||| |||||||    
T  20811387 aggcgactaggggcggaccgctattaaggcggaattt 20811351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 20837842 - 20837706
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  20837842 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggatgctgcaattaaggctaaccaaaggtcgcaattt 20837743  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaattt 136  Q
    ||||||||| ||||||||||| ||||||| |||||||    
T  20837742 aggcgactaggggcggaccgctattaaggcggaattt 20837706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1028164 - 1028305
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||| |||||||    
T  1028164 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgtaggctaaccaaaggttgcaattt 1028263  T
Q  101 aggcgactagggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||||||||||| |||| |||||||||| |||||||||||||    
T  1028264 aggcgactaggggggactgcaattaaggcggaatttccaaca 1028305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 27760406 - 27760282
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| | |||| |||    
T  27760406 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgaccaggggcagac 27760307  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    ||||||||||| |||||||||||||    
T  27760306 cgcaattaaggcggaatttccaaca 27760282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 17016170 - 17016304
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| || |||||||||||||| |    
T  17016170 tatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctataatgaaggctaaccaaaagtcgcaatttaggc-a 17016268  T
Q  107 ctagggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||||||||||||||||||||| |||||||||||||    
T  17016269 ctagggcggaccgcaattaaggcggaatttccaaca 17016304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 27760102 - 27759967
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| |    
T  27760102 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaagtgttggaggctgcaatgaaggttaaccaaaggtcgcaatttaggcta 27760003  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaac 141  Q
    ||| ||| ||||||||||||||| ||||||||||||    
T  27760002 ctaggggaggaccgcaattaaggcggaatttccaac 27759967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 37995705 - 37995850
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||| |||| ||||||||    
T  37995705 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagctggaatgaaggcaaaccaaaggccgcaattt 37995804  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaacatta 145  Q
    ||||||||| |||| ||||||||| |||| ||||||||||||||||    
T  37995805 aggcgactaggggcagaccgcaataaaggcggaatttccaacatta 37995850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 873773 - 873908
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| |||||||||||| |    
T  873773 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagctgcaatgaaggcaaaccaaaggccgcaatttaggcca 873872  T
Q  107 ctagggcggaccgcaattaaggtggaatttccaaca 142  Q
    |  |||||||||||||| |||| || ||||||||||    
T  873873 caggggcggaccgcaataaaggcgggatttccaaca 873908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 28010193 - 28010329
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | || |||| ||||||||||| ||    
T  28010193 tatctatcctatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttgaaggctgcaatgaaggcaagccaaaggccgcaatttaggtga 28010292  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||| ||||||||| |||| |||||||||||||    
T  28010293 ctaggggcagaccgcaataaaggcggaatttccaaca 28010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 12595183 - 12595316
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||         |||||||||| |||||||||| || |||| |||||    
T  12595183 gagtgttatctatccgatgtgggactaaatccaccccctcaaagccaacacaatga---------aggctgcaatgaaggctaaccaaaagtcgaaattt 12595273  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  12595274 aggcgactaggggcggaccgcaattaaggcggaatttccaaca 12595316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 24994087 - 24993963
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||  |||| || |||||||||||||||| || ||||||||    
T  24994087 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagttgcaatgaaggtaaaccaaatgtcgcaatttaggcgattaggggcggac 24993988  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    |||||| ||||||||||||| ||||    
T  24993987 cgcaataaaggtggaatttcgaaca 24993963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 24918179 - 24918055
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||| || ||| |||||||||||| || ||||||||    
T  24918179 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagttgcaatgaaggcaaaccaaatgtcacaatttaggcgattaggggcggac 24918080  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    |||||| |||| |||||||| ||||    
T  24918079 cgcaatgaaggcggaatttcgaaca 24918055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 38131791 - 38131657
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||   |||||||||||||||||| ||||| |||| |||| | |||||||| |||    
T  38131791 tatctatccgatgtgggactaaatccactccctcaaagccaacacaat---ggtgttggaggctgcaatgaaggccaaccaaaggccacaatttagacga 38131695  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaacat 143  Q
    ||| |||||||||||||| ||||  |||||||||||||    
T  38131694 ctaggggcggaccgcaataaaggcagaatttccaacat 38131657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 28009874 - 28010010
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || |||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||| | || || |  ||| |||||||||    
T  28009874 tatctatctgatgtgggactaaatccacgccctcaaagccaacacaaagaaggtgtttgaggctgcaatgaaggcaagccaaatgctgcagtttaggcga 28009973  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||| ||| |||||||||| |||||||||||||    
T  28009974 ctaggggcagactgcaattaaggcggaatttccaaca 28010010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 4796369 - 4796311
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||||||||||| |||||    
T  4796369 gactaaatccaccccttcacacccaacacaatgaaggtgttggaggctgcaatgaaggc 4796311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 31973523 - 31973585
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||| |||||    
T  31973523 gtgggactaaatccaccctttcacacccaacacaatgaaggtgttggaggctgcaataaaggc 31973585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 142
Target Start/End: Original strand, 17435314 - 17435451
Alignment:
Q  6 ttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcg 105  Q
    |||||||||||| || ||||| ||| || |||||| | ||||||||||||||||||||||||| |||||| ||| | |||| || | | |||||||||||    
T  17435314 ttatctatccgatgtaggactgaatgcatcccctcgatgccaacacaatgaaggtgttggaggttgcaatgaagacaaaccaaatgcctcaatttaggcg 17435413  T
Q  106 act-agggcggaccgcaattaaggtggaatttccaaca 142  Q
    | | | || ||||| |||| ||||  ||||||||||||    
T  17435414 attaatggtggaccacaataaaggctgaatttccaaca 17435451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 904842 - 904904
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||| |||||||||| |||||    
T  904842 gtgggactaaatccaccccttcaaaggcaacacaatgaagggcttgaaggctgcaatgaaggc 904904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 30588084 - 30588038
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||||    
T  30588084 tatctaaccgatgtgggactaaatccaccccctcaaagccaatacaa 30588038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 31973216 - 31973262
Alignment:
Q  21 gggactaaatccaccccctcaaagccaacacaatgaaggtgttggag 67  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  31973216 gggactaaatccaccccttcaaacccaacacaacgaaggtgttggag 31973262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 4464971 - 4465003
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacac 51  Q
    |||||||||||||||||||||||||||||||||    
T  4464971 gtgggactaaatccaccccctcaaagccaacac 4465003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 29432427 - 29432395
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacac 51  Q
    |||||||||||||||||||||||||||||||||    
T  29432427 gtgggactaaatccaccccctcaaagccaacac 29432395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 38663262 - 38663230
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacac 51  Q
    |||||||||||||||||||||||||||||||||    
T  38663262 gtgggactaaatccaccccctcaaagccaacac 38663230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 15844313 - 15844368
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 74  Q
    ||||||||||||||||||| ||| |  ||||||||||||||||||| ||| |||||    
T  15844313 gtgggactaaatccaccccttcacactcaacacaatgaaggtgttgtaggttgcaa 15844368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 4465262 - 4465308
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||||| |||| ||||||||||||| |||| ||||||||||||||||    
T  4465262 tatctaaccgacgtgggactaaatctaccctctcaaagccaacacaa 4465308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 144
Target Start/End: Original strand, 30588226 - 30588260
Alignment:
Q  110 gggcggaccgcaattaaggtggaatttccaacatt 144  Q
    ||||||||||||||||||| |||||||||||||||    
T  30588226 gggcggaccgcaattaaggcggaatttccaacatt 30588260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 50858039 - 50857903
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50858039 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 50857940  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||| ||||||||||||||| |||||||||||||    
T  50857939 ctaggggtggaccgcaattaaggcggaatttccaaca 50857903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 53740209 - 53740073
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  53740209 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcacaatttaggcga 53740110  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  53740109 ctaggggcggaccgcaattaaggcggaatttccaaca 53740073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 50858355 - 50858219
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50858355 tatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 50858256  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||| ||||||||||||||| |||||||||||||    
T  50858255 ctaggggtggaccgcaattaaggcggaatttccaaca 50858219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 52214648 - 52214505
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||| ||||||| || | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  52214648 gagtattatctacccaatgtgggactaattccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtctcaattt 52214549  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaacat 143  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  52214548 aggcgactaggggcggaccgcaattaaggcggaatttccaacat 52214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 991070 - 990930
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  991070 gagtgctatctatccgacgtgg-actaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtcgcaattt 990972  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| |||||||||||||||||||  ||||||||||||    
T  990971 aggcgactaggggcggaccgcaattaagg-cgaatttccaaca 990930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 15665180 - 15665043
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaa-ccgaaggtcgcaatttaggcg 105  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  15665180 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaacccaaaggtcgcaatttaggcg 15665081  T
Q  106 act-agggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||  ||||||||||||||||||| |||||||||||||    
T  15665080 actgggggcggaccgcaattaaggcggaatttccaaca 15665043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 29734588 - 29734451
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  29734588 tatctatccgatgtgggactaaattcaccccctcaaagtcaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcga 29734489  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaacat 143  Q
    ||| ||||||||| ||||||||| ||||||||||||||    
T  29734488 ctaggggcggaccacaattaaggcggaatttccaacat 29734451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 45427013 - 45427149
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  45427013 tatctatccgatgtggggctaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagctaacccaaggtcgcaatttaggcga 45427112  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||||||| |||||||||| |||||||||||||    
T  45427113 ctaggggcggacagcaattaaggcggaatttccaaca 45427149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 45427341 - 45427465
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  45427341 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaacccaaggtcgcaatttaggcgactaggggcggac 45427440  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    |||| |||||| |||||||||||||    
T  45427441 cgcagttaaggcggaatttccaaca 45427465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 32988347 - 32988483
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||||||||||||| ||    
T  32988347 tatctatccgatgtgggactaaatccaccacctcaaagccaacacaatgaaggtgttgggggctgcaatgaaggctaaccaaaagtcgcaatttaggtga 32988446  T
Q  107 ctag-ggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||| |||||||||||||||||| |||||||||||||    
T  32988447 ctagcggcggaccgcaattaaggcggaatttccaaca 32988483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29669434 - 29669575
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||     
T  29669434 gagtgctatctatccgatgtgggactaaatccacccc-tcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggcagcaatta 29669532  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  29669533 aggcgactaggggcggaccgcaattaaggcggaatttccaaca 29669575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 991237 - 991139
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatt 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  991237 gagtgttatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtcgcaatt 991139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29669749 - 29669890
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||     
T  29669749 gagtgctatctatctgatgtgggactaaatccacccc-tcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaatta 29669847  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||    
T  29669848 aggcgactaggggtggaccgcaattaaggcggaatttccaaca 29669890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 53739893 - 53739748
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaa---------tgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaa 97  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  53739893 tatctatccgatatgggactaaatccaccccctcaaagccaacacaaattacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaa 53739794  T
Q  98 tttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||    
T  53739793 tttaggcgactaggggcggaccgcaattaaggcagaatttccaaca 53739748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 53738279 - 53738421
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||| |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||    
T  53738279 gagtcttatctattctatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggccgcaattt 53738378  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||| |||||||||| |||| |||||| ||||||    
T  53738379 aggcgactaggggtggaccgcaataaaggcggaattaccaaca 53738421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 990580 - 990476
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||     
T  990580 gagtgttatctatccgatgtgggactaaattcaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtggcaatta 990481  T
Q  101 aggcg 105  Q
    |||||    
T  990480 aggcg 990476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 23018497 - 23018361
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||| || ||||| |||||||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  23018497 tatctatccgatgtgagattaaattcacccccttaaagccaacacaatgaaggtgttggaggttgcaatgaaggctaaccaaaggtcgcaatttaggcga 23018398  T
Q  107 ctaggg-cggaccgcaattaaggtggaatttccaaca 142  Q
    |||||| ||||||||||| |||| |||||| ||||||    
T  23018397 ctagggacggaccgcaatgaaggcggaattaccaaca 23018361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 43972382 - 43972246
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||| || | |||| ||||||||||||||    
T  43972382 tatctatccgatgtgggactaaattcaccccctcaaaaccaacacaatgaaggtgttggaggctgcaatgaaggcaaatcaaaggccgcaatttaggcga 43972283  T
Q  107 ct-agggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||  |||| ||||||||| ||||||||||||||||||    
T  43972282 ctgggggcagaccgcaatgaaggtggaatttccaaca 43972246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 56509636 - 56509504
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggc-g 105  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| ||| |||||||| |    
T  56509636 tatctatccgatgtaggactaaatccaccccctcaaagccaacacaatgaaggtgttggaagctgcaatgaaggcaaaccaaaggccgcgatttaggcgg 56509537  T
Q  106 acta-gggcggaccgcaattaaggtggaatttc 137  Q
    |||| |||||||||||||| |||||||||||||    
T  56509536 actaggggcggaccgcaataaaggtggaatttc 56509504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 43972066 - 43971924
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||  |||| ||||||| |||||||||      
T  43972066 tatctatccaacgtgggactaaatccacccccttaaagccaacacaatgaaggtgttggaggctgcaatgaaggtaaaccaaaggtcgtaatttaggcag 43971967  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaacattacct 148  Q
    ||| |||| ||||||||| ||||||||||||||| ||| ||||    
T  43971966 ctaggggcagaccgcaatgaaggtggaatttccaccatgacct 43971924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 36558543 - 36558679
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| || ||||| |||| |||| ||||||| ||| ||    
T  36558543 tatctatccgatgtgggactaaatccaccccctcaaagccaacacagtgaaggtgttggaggttgctatgaaggcaaaccaaaggccgcaattaaggtga 36558642  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||||||| ||||||||||  ||||||||||||    
T  36558643 ctaggggcggactgcaattaaggcagaatttccaaca 36558679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 51469508 - 51469374
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||||||||||||||||||||||||||||      |||||||||||||||||||||| ||||| |||| || | ||||||||||||||    
T  51469508 tatctatccgatgtgggactaaatccaccccctcaaagccag-----tgaaggtgttggaggctgcaatgaaggcaaacccaaaggcgcaatttaggcga 51469414  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaacatta 145  Q
    ||| |||||||||||||| |||| ||||||||||||||||    
T  51469413 ctaggggcggaccgcaataaaggcggaatttccaacatta 51469374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 990821 - 990732
Alignment:
Q  54 tgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  990821 tgaaggtgttggaggctgcaattaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 48843094 - 48843231
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || | ||||||||||||||||||||| |||||||| ||||||||||||| |||||||||| ||||  || | |||| ||||||||||||||    
T  48843094 tatctatctgatgcgggactaaatccaccccctcagagccaacaaaatgaaggtgttgaaggctgcaatgaaggaaaatcaaaggccgcaatttaggcga 48843193  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaacat 143  Q
    ||| ||| |||||||||| |||| ||||||||||||||    
T  48843194 ctaggggtggaccgcaataaaggcggaatttccaacat 48843231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 22867111 - 22866975
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||||| |||  |||| ||||||| ||||||    
T  22867111 tatctatccgacgtgggactaaatccaccccctcaaagccagcacaacgaaggtgttggaagctgcaatgaaggcaaactaaaggccgcaattaaggcga 22867012  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||| |||| |||| |||| |||||||| ||||    
T  22867011 ctaggggcagaccacaataaaggcggaatttctaaca 22866975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 49544360 - 49544226
Alignment:
Q  6 ttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcg 105  Q
    |||||||||||| |||| || ||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||| |||| ||||||| |||||    
T  49544360 ttatctatccgatgtggaacaaaatccatccc-tcaaagccaacacaatcaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaattaaggcg 49544262  T
Q  106 actagggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||| ||||| |||| |||  |||||||||||||    
T  49544261 actaggg-ggaccacaataaagacggaatttccaaca 49544226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 17222783 - 17222849
Alignment:
Q  77 aaggctaaccgaaggtcgcaatttaggcgactag-ggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17222783 aaggctaaccaaaggtcgcaatttaggcgactagaggcggaccgcaattaaggtggaatttccaaca 17222849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 51470510 - 51470435
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaa-gccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  51470510 tatctatccgatgtgggactaaatcctccccctcaaaagccaacacagtgaaggtgttggaggctgcaatgaaggc 51470435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 13254410 - 13254358
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaagg 59  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  13254410 tatctatccaatgtgggactaaatccaccccctcaaagccaacacaatgaagg 13254358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 18862642 - 18862548
Alignment:
Q  52 aatgaaggtgttggaggctgc---aattaaggctaaccgaaggtcgcaatttaggcgactag-ggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||||||||||||||||||||   ||| || ||||||  ||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  18862642 aatgaaggtgttggaggctgctacaatgaaagctaacaaaaggttgcaatttaggcgactagaggcggaccgcgattaaggcggaatttccaaca 18862548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34206065 - 34206117
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  34206065 gagtcttatctaaccgatgtgggactaaatccaccccctcaaagccaacacaa 34206117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 30491043 - 30491102
Alignment:
Q  22 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    |||||||||||||||| ||| | |||||||| |||||||||||||||||||||| |||||    
T  30491043 ggactaaatccaccccttcacacccaacacattgaaggtgttggaggctgcaatgaaggc 30491102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34206327 - 34206379
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||| ||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  34206327 gagtcttatctaaccgatgtgagactaaatccaccccctcaaagccaacacaa 34206379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17222737 - 17222784
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaa 48  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  17222737 gagtgctatctatcctatgtgggactaaatccaccccctcaaagccaa 17222784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 42788140 - 42788090
Alignment:
Q  24 actaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 74  Q
    |||||||| ||||| ||||| ||||| ||||||||||||||||||||||||    
T  42788140 actaaatctaccccttcaaatccaacccaatgaaggtgttggaggctgcaa 42788090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 46332620 - 46332744
Alignment:
Q  17 aagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgact--agggcg 114  Q
    ||||||||||||||||||||| | ||| ||||  ||||||| |||||| |||||||||| ||||| | || || | ||||| ||||||| ||   |||||    
T  46332620 aagtgggactaaatccaccccttaaaacccaatccaatgaacgtgttgaaggctgcaatgaaggcaacccaaatgccgcaa-ttaggcggcttaggggcg 46332718  T
Q  115 gaccgcaattaaggtggaatttccaa 140  Q
    ||||||||| |||| | |||||||||    
T  46332719 gaccgcaatgaaggcgaaatttccaa 46332744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 26942679 - 26942732
Alignment:
Q  22 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaat 75  Q
    |||||||||||||||| ||| | ||||||||||||| |||||||||| ||||||    
T  26942679 ggactaaatccaccccttcacacccaacacaatgaatgtgttggaggttgcaat 26942732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 44898837 - 44898873
Alignment:
Q  45 ccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||||||||||||||||| |||||    
T  44898837 ccaacacaatgaaggtgttggaggctgcaatgaaggc 44898873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 52043171 - 52043223
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaat 75  Q
    ||||||||||||||| ||| | || | ||||||||||||||||||||||||||    
T  52043171 gactaaatccaccccttcacacccgatacaatgaaggtgttggaggctgcaat 52043223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 54595150 - 54595212
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||| ||||||||| ||| | ||  |||||||||||||||||||| |||||| |||||    
T  54595150 gtgggactatatccaccccttcacaccccgcacaatgaaggtgttggaggttgcaatgaaggc 54595212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 7193697 - 7193660
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaag 44  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  7193697 tatctaaccgatgtgggactaaatccaccccctcaaag 7193660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 26942464 - 26942517
Alignment:
Q  22 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaat 75  Q
    |||| ||||||||||| ||| | ||||||||||||| |||||||||| ||||||    
T  26942464 ggacaaaatccaccccttcatacccaacacaatgaatgtgttggaggttgcaat 26942517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 27048485 - 27048522
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaag 44  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  27048485 tatctaaccgatgtgggactaaatccaccccctcaaag 27048522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 3137748 - 3137784
Alignment:
Q  45 ccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    |||||||||||||||||||| |||||||||| |||||    
T  3137748 ccaacacaatgaaggtgttgcaggctgcaatgaaggc 3137784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 21497761 - 21497797
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccctcaaag 44  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  21497761 atctaaccgatgtgggactaaatccaccccctcaaag 21497797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 21498213 - 21498177
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccctcaaag 44  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  21498213 atctaaccgatgtgggactaaatccaccccctcaaag 21498177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 23311562 - 23311613
Alignment:
Q  22 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 74  Q
    |||||||||||||||| ||||| ||||||| |  |||||||||||||||||||    
T  23311562 ggactaaatccaccccttcaaacccaacac-acaaaggtgttggaggctgcaa 23311613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 32784422 - 32784382
Alignment:
Q  13 tccgaagtgggactaaatccaccccctcaaagccaacacaa 53  Q
    ||||| |||||  ||||||||||||||||||||||||||||    
T  32784422 tccgatgtgggtataaatccaccccctcaaagccaacacaa 32784382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 38908143 - 38908107
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccctcaaag 44  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  38908143 atctaaccgatgtgggactaaatccaccccctcaaag 38908107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 41176732 - 41176696
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccctcaaag 44  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  41176732 atctaaccgatgtgggactaaatccaccccctcaaag 41176696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 45443313 - 45443168
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  45443313 gagtgctatctatccaatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaattt 45443214  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaacatta 145  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  45443213 aggcgactaggggcggaccgcaattaaggcggaatttccaacatta 45443168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 54369066 - 54368930
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  54369066 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcga 54368967  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  54368966 ctaggggcggaccgcaattaaggcggaatttccaaca 54368930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 27219362 - 27219220
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  27219362 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacgatgaaggtgttggaggctgcaattacggctaaccaaaggtcgcaattt 27219263  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  27219262 aggcgactaggggcggaccgcaattaaggcggaatttccaaca 27219220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 44573353 - 44573217
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44573353 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 44573254  T
Q  107 ct-agggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||  ||||||| ||||| ||||| |||||||||||||    
T  44573253 ctgggggcggatcgcaactaaggcggaatttccaaca 44573217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 41380757 - 41380615
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||     
T  41380757 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatta 41380658  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| |||||| |||||||||||| |||||||||||||    
T  41380657 aggcgactaggggcgggccgcaattaaggcggaatttccaaca 41380615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 44573965 - 44573846
Alignment:
Q  24 actaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaa 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44573965 actaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggcggaccgcaa 44573866  T
Q  123 ttaaggtggaatttccaaca 142  Q
    |||||| |||||||| ||||    
T  44573865 ttaaggcggaatttctaaca 44573846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4256267 - 4256125
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||||    
T  4256267 gagtgttatccatccgatgtgggactaaatccaccccctcaaagccaacacaataaaggtgttggaggctgcaatgaaggctaaccaaaggttgcaattt 4256168  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||    
T  4256167 aggcgactagggggggaccgcaattaaggcggaatttccaaca 4256125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13769362 - 13769504
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  13769362 gagtgctatctatccaatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggttgcaattt 13769461  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||||||||||| | |||||||||||||    
T  13769462 aggcgactaggggcggaccgcaattaaagcggaatttccaaca 13769504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4255543 - 4255401
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| |||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||    
T  4255543 gagtgctatccatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctacaatgaaggctaaccaaaggtcccaattt 4255444  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  4255443 aggcgactaggggcggaccgcaattaaggcggaatttccaaca 4255401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 34715527 - 34715668
Alignment:
Q  2 agtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattta 101  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||| ||||||||||||||    
T  34715527 agtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacagtgaaggtgttggaggctgcgatgaaggctaaccaaaggtcgcaattta 34715626  T
Q  102 ggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||||||| ||||||| ||||||||||| |||||||| ||||    
T  34715627 ggcgactaggggcggaacgcaattaaggcggaatttcaaaca 34715668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 43101448 - 43101584
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  43101448 tatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggccaaccaaaggtcgcaatttaggcga 43101547  T
Q  107 ctaggg-cggaccgcaattaaggtggaatttccaaca 142  Q
    |||||| |||||| |||||||||  ||||||||||||    
T  43101548 ctagggacggacctcaattaaggcagaatttccaaca 43101584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 44573667 - 44573533
Alignment:
Q  6 ttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcg 105  Q
    |||||||||  | |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  44573667 ttatctatcttatgtgggactaaatccaccccctcaaagccaacacaatg---gtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcg 44573571  T
Q  106 acta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||| ||||||||||||||||||| ||||| |||||||    
T  44573570 actaggggcggaccgcaattaaggcggaatctccaaca 44573533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 50203928 - 50204050
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||| |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  50203928 gagtcttatctatccgatgtgagactaaacccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcacaattt 50204027  T
Q  101 aggcgacta-gggcggaccgcaa 122  Q
    ||||||||| |||||||||||||    
T  50204028 aggcgactaggggcggaccgcaa 50204050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 48685398 - 48685531
Alignment:
Q  11 tatccgaagtgggactaaatccacccc-ctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta 109  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||| |||||| |||||||||||||||    
T  48685398 tatccgatgtgggactaaatccacccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaaactaaccaaaggtcacaatttaggcgacta 48685497  T
Q  110 g-ggcggaccgcaattaaggtggaatttccaaca 142  Q
    | ||||||||||||||||||  ||||||||||||    
T  48685498 gaggcggaccgcaattaaggcagaatttccaaca 48685531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 24860152 - 24860273
Alignment:
Q  22 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||||||| |||| |||||||||||    
T  24860152 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggccgcaatttaggcaactaggggcggaccgc 24860251  T
Q  121 aattaaggtggaatttccaaca 142  Q
    ||| ||||  ||||||||||||    
T  24860252 aataaaggcagaatttccaaca 24860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 14170070 - 14170213
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| |||| || | ||||||||    
T  14170070 gagtgttatttatccgatgtgggactaaatccagcccctcaaagccaacacaatgaaggtgatggaggctgcaatgaaggcaaaccaaatgccgcaattt 14170169  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaacat 143  Q
    ||||| ||| |||||| ||||||| |||| |||| |||||||||    
T  14170170 aggcggctaggggcgggccgcaataaaggcggaacttccaacat 14170213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 47833739 - 47833839
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  47833739 tatctatccgatgtgggactaaatccacccc-tcaaagccaacacaaggaaggtgttggtggctgcaattaaggctaaccaaaggtcgcaatttaggcga 47833837  T
Q  107 ct 108  Q
    ||    
T  47833838 ct 47833839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 46139265 - 46139122
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||| ||| |||||| ||  || ||||||    
T  46139265 gagtgttatctatccaatgtggaactaaattcaccccctcaaagccaacacaatgaagatgttggaggttgcaatgaagactaaccaaatatcacaattt 46139166  T
Q  101 aggcgactaggg-cggaccgcaattaaggtggaatttccaacatt 144  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||    
T  46139165 aggcgactagggatggacc-caattaaggtggaatttccaacatt 46139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 3985800 - 3985716
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaagg 91  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||| ||||    
T  3985800 tatctatccgatgtgggactaaatccaccccctcaaagccaacacagtgaaggtgttggaggctgctatgaaggcaaaccaaagg 3985716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 662743 - 662619
Alignment:
Q  17 aagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcgg 115  Q
    ||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||| ||||| | || || | ||||| ||||||||||| ||||||    
T  662743 aagtgggactaaatcgaccccttcaaacccaacacaataaaggtgttggaggctgcaatgaaggcaacccaaatggcgcaa-ttaggcgactaggggcgg 662645  T
Q  116 accgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||| |||||||||||||    
T  662644 accgcaatt-aggcggaatttccaaca 662619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 34250441 - 34250564
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagg-gcggac 117  Q
    ||||||| |||| |||||| ||||| | |||||||| |||||||||||||||||||| ||||| | || || ||||||| ||||||| ||||| || |||    
T  34250441 gtgggacgaaattcaccccttcaaacctaacacaattaaggtgttggaggctgcaatgaaggcaacccaaatgtcgcaa-ttaggcggctaggagctgac 34250539  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    ||||||||||| |||||||||||||    
T  34250540 cgcaattaaggcggaatttccaaca 34250564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 9658282 - 9658193
Alignment:
Q  52 aatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaa 140  Q
    |||||||||||||||||||||||| |||| ||||| ||||  |||||||||||||||| |||| ||| |||||||||| |||||||||||    
T  9658282 aatgaaggtgttggaggctgcaatgaaggttaaccaaaggctgcaatttaggcgactaggggctgacagcaattaaggcggaatttccaa 9658193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 54861542 - 54861484
Alignment:
Q  17 aagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaat 75  Q
    ||||| ||||||||||||||| ||| | ||||||||| |||||||||||||||||||||    
T  54861542 aagtgagactaaatccaccccttcacacccaacacaacgaaggtgttggaggctgcaat 54861484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 31603988 - 31603931
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 80  Q
    |||||||||| |||||||||||  |||||||||||||| |||||||||||||| ||||    
T  31603988 gactaaatccgccccctcaaaggtaacacaatgaaggttttggaggctgcaataaagg 31603931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 4255808 - 4255761
Alignment:
Q  96 aatttaggcgactaggg-cggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  4255808 aatttaggcgactaggggcggaccgcaattaaggcggaatttccaaca 4255761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 4255990 - 4255943
Alignment:
Q  96 aatttaggcgactaggg-cggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||||||||||| |||||||||||||||| |||||| ||||||    
T  4255990 aatttaggcgactaggggcggaccgcaattaaggcggaattcccaaca 4255943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 351198 - 351103
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaagg---tgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggg 112  Q
    ||||||||||| ||||||| |||||  ||||||||||||||   | ||| |||||||||||||||| || | || | ||||| ||||||||||||||    
T  351198 gtgggactaaagccaccccttcaaactcaacacaatgaaggtattattgaaggctgcaattaaggcaaaacaaatgccgcaa-ttaggcgactaggg 351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 3985684 - 3985618
Alignment:
Q  77 aaggctaaccgaaggtcgcaatttaggcgactaggg-cggaccgcaattaaggtggaatttccaaca 142  Q
    ||||| |||| |||| ||||||| |||||||||||| ||||| ||||||||||  ||||||||||||    
T  3985684 aaggcaaaccaaaggccgcaattaaggcgactaggggcggactgcaattaaggcagaatttccaaca 3985618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24539186 - 24539136
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacac 51  Q
    |||| ||||||| | || || ||||||||||||||||||||||||||||||    
T  24539186 gagtcttatctaactgatgtaggactaaatccaccccctcaaagccaacac 24539136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 21750502 - 21750465
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaag 44  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  21750502 tatctaaccgatgtgggactaaatccaccccctcaaag 21750465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 31606442 - 31606402
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgtt 63  Q
    ||||||||| | |||||||||| ||||||||||||||||||    
T  31606442 gactaaatctaacccctcaaaggcaacacaatgaaggtgtt 31606402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 34356987 - 34357023
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccctcaaag 44  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  34356987 atctaaccgatgtgggactaaatccaccccctcaaag 34357023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 48407873 - 48407837
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccctcaaag 44  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  48407873 atctaaccgatgtgggactaaatccaccccctcaaag 48407837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 50095087 - 50095119
Alignment:
Q  21 gggactaaatccaccccctcaaagccaacacaa 53  Q
    |||||||| ||||||||||||||||||||||||    
T  50095087 gggactaactccaccccctcaaagccaacacaa 50095119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 5e-57; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 257344 - 257480
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  257344 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcga 257443  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  257444 ctaggggcggaccgcaattaaggcggaatttccaaca 257480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 43167964 - 43168106
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  43167964 gagtgctatctatccgatttgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaattt 43168063  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  43168064 aggcgactaggggcggaccgcaattaaggcggaatttccaaca 43168106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 40121695 - 40121831
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40121695 tatctatccgatgtggaactaaatccaccccctcaaagccaacacaataaaggtgttggaggctgcaattaaggctaaccgaaggtagcaatttaggcga 40121794  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  40121795 ctaggggcggaccgcaattaaggcggaatttccaaca 40121831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 41670893 - 41670759
Alignment:
Q  9 tctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgact 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||    
T  41670893 tctatccgatgtgggactaaatccaccccctcaaagccaacacaatgagggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcaact 41670794  T
Q  109 a-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    | |||||||| |||||||||| |||||||||||||    
T  41670793 aggggcggactgcaattaaggcggaatttccaaca 41670759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1661262 - 1661404
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  1661262 gagttttatctatccgatgtgggactaaatccaccccgtcaaagccaacgcaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaattt 1661361  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||| |||| ||||| ||||| ||||||| |||||||||||||    
T  1661362 aggcaactaggggcgaaccgcgattaaggcggaatttccaaca 1661404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1663676 - 1663817
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||     
T  1663676 gagtgctatctatccgatgtgggactaaatccacccc-tcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaatta 1663774  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||| |||| ||||||||||||||||||| |||||||||||||    
T  1663775 aggcaactaggggcggaccgcaattaaggcggaatttccaaca 1663817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 7135320 - 7135456
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||   |||||| |||||| |||||||||| |||||||||||||||| ||    
T  7135320 tatctatccgatgtgtgactaaatccaccccctcaaagccaacacaatgaaggaaatggaggttgcaatgaaggctaaccaaaggtcgcaatttaggtga 7135419  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||| | |||||||||||||    
T  7135420 ctaggggcggaccgcaattaaagcggaatttccaaca 7135456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 28910047 - 28909923
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||| |||| ||||||||||||||||| ||||||||    
T  28910047 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagcaaaccaaagggcgcaatttaggcgactaggggcggac 28909948  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    | |||| |||| |||||||||||||    
T  28909947 cacaataaaggcggaatttccaaca 28909923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 40122043 - 40122139
Alignment:
Q  47 aacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  40122043 aacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactaggggtggaccgcaattaaggcggaatttccaaca 40122139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30296662 - 30296520
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||||||||||||| ||||||||  |||||||| ||| |||||||||||||||||||||||||||  |||| ||| ||| |||||| |||||||||||||    
T  30296662 gagtgttatctatctgaagtgggtttaaatccaacccttcaaagccaacacaatgaaggtgttggttgctgtaatgaagactaaccaaaggtcgcaattt 30296563  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||| | ||||||||| |||||||||||||    
T  30296562 aggcgactaggggcggatcacaattaaggcggaatttccaaca 30296520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 41670610 - 41670475
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||| ||| |||||||||||||| |||| ||||||||||||||| |||||||||||||| |||||| |||||||||| |||||||||| ||||||||    
T  41670610 tatctattcgatgtgggactaaatccgcccc-tcaaagccaacacaacgaaggtgttggaggatgcaatgaaggctaaccaaaggtcgcaaattaggcga 41670512  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||||||||  |||||||| |||||||| ||||    
T  41670511 ctaggggcggaccaaaattaaggcggaatttcaaaca 41670475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 29780443 - 29780352
Alignment:
Q  50 acaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatttccaa 140  Q
    |||||||||||||||||||||||||| ||||| |||  || | ||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  29780443 acaatgaaggtgttggaggctgcaatgaaggcaaactaaaagccgcaatttaggcgactaggggcggaccgcaataaaggtggaatttccaa 29780352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 41710032 - 41709977
Alignment:
Q  20 tgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaat 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41710032 tgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggttgcaat 41709977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 3973167 - 3973052
Alignment:
Q  27 aaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaatta 125  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||| | || || || |||| ||||||| ||| ||| |||||||||| |    
T  3973167 aaatccaccccctcaaacccaacacgatgaaggtgttgaaggctgcaatgaaggcaacccaaatgttgcaa-ttaggcggctaggggtggaccgcaatga 3973069  T
Q  126 aggtggaatttccaaca 142  Q
    ||| |||||||||||||    
T  3973068 aggcggaatttccaaca 3973052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 8585123 - 8584999
Alignment:
Q  2 agtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattta 101  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||         ||||||||||||| ||||||| ||||| ||     |    
T  8585123 agtgctatctatccgatgtgggactaaatccaccccttcaaagccaacacaatga---------aggctgcaattaaagctaaccaaaggttgc-----a 8585038  T
Q  102 ggcgacta-gggcggaccgcaattaaggtggaatttcca 139  Q
    |  ||||| ||||||||||||||||||||||||||||||    
T  8585037 gatgactaggggcggaccgcaattaaggtggaatttcca 8584999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 32000832 - 32000770
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| |||||    
T  32000832 gtgggactaaatccatcccctcaaagccaacaccatgaaggtgttgaaggctgcaatgaaggc 32000770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 10193467 - 10193588
Alignment:
Q  21 gggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggaccgc 120  Q
    ||||||||| ||||||||||| |  ||||||||| |||| ||||||||||||||||||||| | || || | ||||| | ||||  |||||||  ||  |    
T  10193467 gggactaaacccaccccctcacacacaacacaataaaggagttggaggctgcaattaaggcaacccaaatgccgcaaatgaggcagctagggcaaacacc 10193566  T
Q  121 aattaaggtggaatttccaaca 142  Q
    |||||||| |||||||||||||    
T  10193567 aattaaggcggaatttccaaca 10193588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 29780158 - 29780101
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 80  Q
    |||||||||||| | ||||||| |||||||||||||||||||||||||||||| ||||    
T  29780158 gactaaatccactctctcaaagtcaacacaatgaaggtgttggaggctgcaatgaagg 29780101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 10406679 - 10406737
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||| ||||| |||||||||||||||| |||| ||||||||||||||||| |||||    
T  10406679 gactaaacccaccgcctcaaagccaacacagtgaaagtgttggaggctgcaatgaaggc 10406737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 23721156 - 23721035
Alignment:
Q  21 gggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccg 119  Q
    ||||||||| ||||||| ||||  |||||||||||| | |||||||||||||||| ||||| | || || | ||||| ||||| | ||| ||| ||||||    
T  23721156 gggactaaacccaccccttcaagtccaacacaatgatgttgttggaggctgcaatgaaggcaacccaaatgccgcaa-ttaggtggctaggggaggaccg 23721058  T
Q  120 caattaaggtggaatttccaaca 142  Q
    || | ||||||||||||||||||    
T  23721057 cattaaaggtggaatttccaaca 23721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 37272122 - 37272166
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacac 51  Q
    |||||| |||| |||||||||||||||||||||||||||||||||    
T  37272122 tatctaaccgatgtgggactaaatccaccccctcaaagccaacac 37272166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 41389321 - 41389199
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    ||||||||||||||||||| ||| | | ||||||||||||||||||  ||||||||| ||| | || | |||| ||||| |||| || ||| |||| |||    
T  41389321 gtgggactaaatccaccccttcacacctaacacaatgaaggtgttgatggctgcaatgaagac-aatcaaaggccgcaa-ttagtcggctacgggcagac 41389224  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    |||||| |||||| |||||||||||    
T  41389223 cgcaatgaaggtgaaatttccaaca 41389199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 30610902 - 30610957
Alignment:
Q  26 taaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    |||||||||||| ||  | ||||||||||||||||||||||||||||||| |||||    
T  30610902 taaatccaccccttcccacccaacacaatgaaggtgttggaggctgcaatgaaggc 30610957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 14092272 - 14092334
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||| ||||||||||| | ||| ||||||||||||| |||| |||| |||||||||    
T  14092272 gtgggactaaacccaccccctcacatccagcacaatgaaggtgatggaagctgaaattaaggc 14092334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 14402290 - 14402352
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||| ||||||||||| | ||| ||||||||||||| |||| |||| |||||||||    
T  14402290 gtgggactaaacccaccccctcacatccagcacaatgaaggtgatggaagctgaaattaaggc 14402352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 39079724 - 39079770
Alignment:
Q  25 ctaaatccaccccctcaaagccaacacaatgaaggtgttggaggctg 71  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||    
T  39079724 ctaaatccaccccttcacacccaacacaatgaaggtgttggaggctg 39079770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 41387545 - 41387483
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||| ||||||| ||| | | |||||||||||||||||||||| |||||| |||||    
T  41387545 gtgggactaaacccaccccttcatacctaacacaatgaaggtgttggaggttgcaatgaaggc 41387483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 422750 - 422869
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggacc 118  Q
    |||||| ||||  |||||| ||| | |||||||||||||||||||||| ||||||||  |||| | || || | ||| | ||||||  |||||||| |||    
T  422750 gtgggattaaagtcaccccttcacacccaacacaatgaaggtgttggaagctgcaatggaggcaacccaaatgccgcga-ttaggctgctagggcgaacc 422848  T
Q  119 gcaattaaggtggaatttcca 139  Q
    ||||| |||| ||||||||||    
T  422849 gcaatgaaggcggaatttcca 422869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 14092016 - 14092052
Alignment:
Q  45 ccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14092016 ccaacacaatgaaggtgttggaggctgcaatgaaggc 14092052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 14402034 - 14402070
Alignment:
Q  45 ccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14402034 ccaacacaatgaaggtgttggaggctgcaatgaaggc 14402070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 43288291 - 43288247
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacac 51  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||    
T  43288291 tatctaaccgatgtgggagtaaatccaccccctcaaagccaacac 43288247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 6960043 - 6960086
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaaca 50  Q
    |||||| |||| |||| |||||||||||||||||||||||||||    
T  6960043 tatctaaccgatgtggaactaaatccaccccctcaaagccaaca 6960086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 12305146 - 12305205
Alignment:
Q  20 tgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaag 79  Q
    |||||||||||||| ||  | ||| |||||||||||||||||||| ||||||||| ||||    
T  12305146 tgggactaaatccatccttttaaacccaacacaatgaaggtgttgaaggctgcaaataag 12305205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 16015498 - 16015547
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggagg 68  Q
    ||||||||||||||||||| ||| || ||||||||||||| | |||||||    
T  16015498 gtgggactaaatccaccccttcacagtcaacacaatgaagattttggagg 16015547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31149090 - 31149039
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||| ||||||||| || || |||||||||||| |||||||||||||||||||    
T  31149090 gagtcttatctatctgatgtaggactaaatcca-cccctcaaagccaacacaa 31149039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31167382 - 31167331
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||| ||||||||| || || |||||||||||| |||||||||||||||||||    
T  31167382 gagtcttatctatctgatgtaggactaaatcca-cccctcaaagccaacacaa 31167331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 46870329 - 46870273
Alignment:
Q  19 gtgggactaaatccaccccct-caaagccaacacaatgaaggtgttggaggctgcaa 74  Q
    ||||||||||||||||||||| || | || | |||||||| ||||||||||||||||    
T  46870329 gtgggactaaatccacccccttcacaccctaaacaatgaaagtgttggaggctgcaa 46870273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 8e-56; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 18905889 - 18905747
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||    
T  18905889 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaataaaggtgttggaggctgcaattaaggctaaccaaaggtcgcaaatt 18905790  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  18905789 aggcgactaggggcggaccgcaattaaggcggaatttccaaca 18905747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 21653354 - 21653217
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccc-tcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcg 105  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  21653354 tatctatccgatgtgggactaaatccacccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaaatcgcaatttaggcg 21653255  T
Q  106 acta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  21653254 actaggggcggaccgcaattaaggcggaatttccaaca 21653217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 21653831 - 21653700
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccc-tcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcg 105  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21653831 tatctatccgatgtgggactaaatccacccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaagatcgcaatttaggcg 21653732  T
Q  106 actagggcggaccgcaattaaggtggaatttc 137  Q
    ||||||| |||| |||||||||| ||||||||    
T  21653731 actaggggggactgcaattaaggcggaatttc 21653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 36997181 - 36997057
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||    
T  36997181 gtgggactaattccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccaaaggtcacaatttaggcgactaggggcggac 36997082  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    ||||||||||| |||||||||||||    
T  36997081 cgcaattaaggcggaatttccaaca 36997057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21085219 - 21085361
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||     
T  21085219 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggttgcaattg 21085318  T
Q  101 aggcgac-tagggcggaccgcaattaaggtggaatttccaaca 142  Q
    | |||||   ||||||||||||||||||| |||||||||||||    
T  21085319 acgcgacagggggcggaccgcaattaaggcggaatttccaaca 21085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 31767026 - 31766890
Alignment:
Q  9 tctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgact 108  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||| ||||||||||| ||||    
T  31767026 tctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggggttggaggctgcaatgaaggcaaaccaaaggccgcaatttaggtgact 31766927  T
Q  109 a-gggcggaccgcaattaaggtggaatttccaacatt 144  Q
    | |||||||||||||| |||| |||||||||||||||    
T  31766926 aggggcggaccgcaatgaaggcggaatttccaacatt 31766890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 32931428 - 32931297
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||     |||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  32931428 tatctatccgatgtgggactaaatccaccccctcaaagccaa-----tgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcga 32931334  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  32931333 ctaggggcggaccgcaattaaggcggaatttccaaca 32931297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 20298605 - 20298729
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgac-tagggcggac 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| | |||||   ||||||||    
T  20298605 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggttgcaattgacgcgacagggggcggac 20298704  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    ||||||||||| |||||||||||||    
T  20298705 cgcaattaaggcggaatttccaaca 20298729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 23027905 - 23028041
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | || |||| ||||||||||| ||    
T  23027905 tatctatcctatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttgaaggctgcaatgaaggcaagccaaaggccgcaatttaggtga 23028004  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||| ||||||||| |||| |||||||||||||    
T  23028005 ctaggggcagaccgcaataaaggcggaatttccaaca 23028041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 3184002 - 3184116
Alignment:
Q  29 atccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaag 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||| |||||||||||||| |||    
T  3184002 atccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggccgcaatttaggcgactaggggcggaccgcaataaag 3184101  T
Q  128 gtggaatttccaaca 142  Q
    | ||||||| |||||    
T  3184102 gcggaatttacaaca 3184116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 23027582 - 23027718
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | || || |  |||||||||||||    
T  23027582 tatctatctgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgtttgaggctgcaatgaaggcaagccaaatgctgcaatttaggcga 23027681  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||||||| ||||| |||| |||||||||||||    
T  23027682 ctaggggcggactgcaatgaaggcggaatttccaaca 23027718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 40754471 - 40754333
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccc-tcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||| || |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| |||| | ||||||||||||    
T  40754471 atctatctgatgtgggactaagtccacccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaacctaaggccccaatttaggcga 40754372  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaacatt 144  Q
    ||| |||||||||||||| |||| ||| |||||| ||||    
T  40754371 ctaggggcggaccgcaataaaggcggattttccagcatt 40754333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 22277554 - 22277415
Alignment:
Q  4 tgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttagg 103  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||  ||||  ||||||||||    
T  22277554 tgttatatatccgatgtgggactaaattcaccccctcaaagccaacaaaatgaaagtgttggaggctgcaatgaaggcaaactaaaggctgcaatttagg 22277455  T
Q  104 cgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    |||||| |||||||||||||| |||  ||||||| |||||    
T  22277454 cgactaggggcggaccgcaataaagacggaattttcaaca 22277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 30590463 - 30590401
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||||| ||| | | ||||||||||||||||||||||||||||| |||||    
T  30590463 gtgggactaaatccaccccttcacaccaaacacaatgaaggtgttggaggctgcaatgaaggc 30590401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 44933174 - 44933232
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| |||||| |||||    
T  44933174 gactaaatccaccccttcaaacccaacacaatgaaggtgttggagggtgcaatgaaggc 44933232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 28488422 - 28488483
Alignment:
Q  20 tgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    |||||||||||||||||| ||||| |||||||||||||||||||  |||||||||| |||||    
T  28488422 tgggactaaatccaccccttcaaacccaacacaatgaaggtgtttaaggctgcaatgaaggc 28488483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 38887116 - 38886993
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    |||||| |||||| ||||| ||| | ||||||||||||||||||||||||||||||  ||||| | || || | ||||| ||||||| ||| ||| ||||    
T  38887116 gtgggattaaatcaaccccttcacacccaacacaatgaaggtgttggaggctgcaacgaaggcaacccaaatgccgcaa-ttaggcggctaggggtggac 38887018  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
     ||||| |||| |||||||||||||    
T  38887017 agcaatgaaggaggaatttccaaca 38886993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 36994009 - 36994055
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||    
T  36994009 tatctaaccgatgtgggactaaatccaccccctcaaagccaacacaa 36994055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 26639126 - 26639065
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaagg 80  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||| | ||||||| ||||    
T  26639126 gtgggactaaatccaccccctcacactcaacacaatgaaggtgttggggactgcaatgaagg 26639065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 34248374 - 34248340
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||||||||||||||||||||||||||||||||||    
T  34248374 gtgggactaaatccaccccctcaaagccaacacaa 34248340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 25971437 - 25971377
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggcta 83  Q
    |||| |||||||||| ||| | ||| |||||||||||||||||| |||||||| |||||||    
T  25971437 gactgaatccaccccttcacacccagcacaatgaaggtgttggatgctgcaatgaaggcta 25971377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 34248104 - 34248057
Alignment:
Q  7 tatctatccgaagtgggactaaatccac-cccctcaaagccaacacaa 53  Q
    |||||| |||| |||||||||||||||| |||||||||||||||||||    
T  34248104 tatctaaccgatgtgggactaaatccacccccctcaaagccaacacaa 34248057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 39590709 - 39590651
Alignment:
Q  22 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    |||||| ||||||||| ||| | ||||||||||||||||||||||| ||||||| |||||    
T  39590709 ggactatatccaccccttcaca-ccaacacaatgaaggtgttggagactgcaatgaaggc 39590651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 81
Target Start/End: Complemental strand, 21653577 - 21653547
Alignment:
Q  51 caatgaaggtgttggaggctgcaattaaggc 81  Q
    |||||||||||||||||||||||||||||||    
T  21653577 caatgaaggtgttggaggctgcaattaaggc 21653547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 27402202 - 27402236
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||||| ||||||||||||||||||||||||||||    
T  27402202 gtgggattaaatccaccccctcaaagccaacacaa 27402236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 43984122 - 43984158
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccctcaaag 44  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  43984122 atctaaccgatgtgggactaaatccaccccctcaaag 43984158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 43984394 - 43984430
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccctcaaag 44  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  43984394 atctaaccgatgtgggactaaatccaccccctcaaag 43984430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 24055180 - 24055322
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||    
T  24055180 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaagggcgcaattt 24055279  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| |||||||||||||||||||  ||||||||||||    
T  24055280 aggcgactaggggcggaccgcaattaaggcagaatttccaaca 24055322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 1409038 - 1408902
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  1409038 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagctaaccaaaggtcgcaatttaggcga 1408939  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    | | ||||||||||||||||||| |||||||||||||    
T  1408938 caaggggcggaccgcaattaaggcggaatttccaaca 1408902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 10418409 - 10418551
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||     
T  10418409 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaagatcgcaatta 10418508  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||    
T  10418509 aggcgactaggggcggaccgcaattaaggcggaaattccaaca 10418551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19054526 - 19054383
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||     
T  19054526 gagtgttatctatccgatgtgggactaattccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatta 19054427  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaacat 143  Q
    ||||||||| |||| || ||||||||||| ||||||| ||||||    
T  19054426 aggcgactaggggctgatcgcaattaaggcggaattttcaacat 19054383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 10733509 - 10733651
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||||    
T  10733509 gagtgttatctgtccaatgtgggactaaatccaccccctcaaagccaacacaatgaagatgttggaggctgcaacgaaggctaaccaaaggtcgcaattt 10733608  T
Q  101 aggcgactaggg-cggaccgcaattaaggtggaatttccaaca 142  Q
    |||||||||||| ||||| |||||||||| |||||||||||||    
T  10733609 aggcgactagggacggactgcaattaaggcggaatttccaaca 10733651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 21067134 - 21067270
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| ||||    
T  21067134 tatctatccgatatgggactaaatccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcacaatttatgcga 21067233  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  21067234 ctaggggcggaccgcaattaaggcggaatttccaaca 21067270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 1744919 - 1745055
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||| | |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  1744919 tatctatccaatgtgggactaactccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcga 1745018  T
Q  107 ctag-ggcggaccgcaattaaggtggaatttccaaca 142  Q
    || | |||||||||| ||||||| |||||||||||||    
T  1745019 ctggaggcggaccgcgattaaggcggaatttccaaca 1745055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 21043852 - 21043992
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  21043852 gagtgctatctatccgatatgggactaaatccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcacaattt 21043951  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaa 140  Q
    | ||||||| |||||||||||||||||||  ||||||||||    
T  21043952 atgcgactaggggcggaccgcaattaaggcagaatttccaa 21043992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 21088925 - 21089061
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||    
T  21088925 tatctatccgatatgggactaaatccaccccctcaaagcaaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcacaattaaggcga 21089024  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||||||||||||||||||  ||||||||||||    
T  21089025 ctaggggcggaccgcaattaaggcagaatttccaaca 21089061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 19753693 - 19753817
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||| |||| |||    
T  19753693 gtgggactaaatccaccccctcaaagctaacacaatgaaggtgttgcaggctgcaataaaggctaaccaaaggtcgcaatttaggcaactaggggcagac 19753792  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    ||||||||||| |||||||||||||    
T  19753793 cgcaattaaggcggaatttccaaca 19753817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 8144050 - 8143909
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||| |||| |||||||     
T  8144050 gagtgctatctatccgatgtgggactaaatccacccc-tcaaagccaacacgttgaaggtgttggaggctgcaatgaaggctaaccaaaggccgcaatta 8143952  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| |||| |||||||||||||| |||||||||||||    
T  8143951 aggcgactaggggcagaccgcaattaaggcggaatttccaaca 8143909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 22911251 - 22911385
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||    
T  22911251 tatctatccaatgtgggacaaaatccagcccctcaaagccaacacaatgaaggtgttagaggctgtaatgaaggcaaaccaaaggtcgcaatttaggcga 22911350  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaa 140  Q
    ||| |||||||||| ||| ||||||||||||||||    
T  22911351 ctaggggcggaccgtaataaaggtggaatttccaa 22911385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 28068490 - 28068626
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || || |||||| ||||||| |||||| |||||||||| |||||| ||||||    
T  28068490 gagtgttatctatccgatgtgggactaaatccaccccctcaaagccacca-aacgaaggttttggaggttgcaatgaaggctaaccaaaggtcacaattt 28068588  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttc 137  Q
    ||||||||| |||||||||||| |||||| ||||||||    
T  28068589 aggcgactaggggcggaccgcatttaaggcggaatttc 28068626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 12134554 - 12134696
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| |||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||||| |||| |||| ||||||||    
T  12134554 gagtgctatctatccgatgtgggactaagtccaccccgtcaaagccaacacaatgaaggtattggaggctgcaatgaaggcaaaccaaaggccgcaattt 12134653  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||| |||||||||  ||| |||| |||||||||||||    
T  12134654 aggtgactaggggcggaccagaataaaggcggaatttccaaca 12134696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 22889645 - 22889779
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||    
T  22889645 tatctatccaatgtgggacaaaatccagcccctcaaagccaacacaatgaaggtgttagaggctgtaatgaaggcaaaccaaaggtcgcaatttaggcga 22889744  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaa 140  Q
    ||| ||||| |||| ||| ||||||||||||||||    
T  22889745 ctaggggcgaaccgtaataaaggtggaatttccaa 22889779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30539268 - 30539126
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||| || |||| ||||| |||| ||||  |||||||    
T  30539268 gagtcttatctatccgatgtgggactaaattcaccccctcaaaaccaacacaatgatggtgttggagtctacaatgaaggcaaaccaaaggctgcaattt 30539169  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| |||||||||||||| |||| |||||||||||||    
T  30539168 aggcgactaggggcggaccgcaataaaggcggaatttccaaca 30539126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 22874920 - 22875056
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||    
T  22874920 tatctatccgatgtgggacaaaatccagcccctcaaagccaacataatgaaggtgttagaggctgtaatgaaggcaaaccaaaggtcgcaatttaggcga 22875019  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||| | ||| ||| |||||| |||||||||||    
T  22875020 ctaggggcaggccgtaataaaggtgaaatttccaaca 22875056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 17096775 - 17096910
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaa-ccgaaggtcgcaatttaggcg 105  Q
    ||||||| ||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||| ||||||||||||    
T  17096775 tatctattcgatgtgagactaaatctatcccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaagctaacccaaaggttgcaatttaggcg 17096874  T
Q  106 actaggg-cggaccgcaattaaggtggaatttccaa 140  Q
    |||||||  |||||||| | |||| |||| ||||||    
T  17096875 actagggatggaccgcagtaaaggcggaacttccaa 17096910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 31944 - 32084
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    |||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| |    || | ||||| ||    
T  31944 gagtcttatctatccgatgttggactaaatccaccccctcaaagccaacaaaatgaaggtgttggagactgcaatgaaggcaacttaaatgccgcaa-tt 32042  T
Q  101 aggcgactagggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||  |  |||||| ||||||||||||||||||    
T  32043 aggtgactaggggtggacgcaataaaggtggaatttccaaca 32084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 32215922 - 32215798
Alignment:
Q  20 tgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactag-ggcggacc 118  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| ||||| |||| |||  | ||||||| |||||||| | ||||||    
T  32215922 tgggactaaatccaccctctcaaaaccaacataatgaaggtgttggaggctgcaatgaaggcaaaccaaagacctcaatttaagcgactagagacggacc 32215823  T
Q  119 gcaattaaggtggaatttccaacat 143  Q
     |||| |||  |||||||| |||||    
T  32215822 acaataaagacggaatttctaacat 32215798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 143
Target Start/End: Original strand, 9602078 - 9602200
Alignment:
Q  21 gggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccg 119  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||| |||| ||| ||||| | || || |  |||| ||||||| ||| |||| ||| |    
T  9602078 gggactaaatccaccccttcacacccaacacaatgaaggtgttggaagctggaatgaaggcaatccaaatgctgcaa-ttaggcggctaggggcagactg 9602176  T
Q  120 caattaaggtggaatttccaacat 143  Q
    |||| |||||||||||||||||||    
T  9602177 caatgaaggtggaatttccaacat 9602200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 1205956 - 1206076
Alignment:
Q  22 ggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgc 120  Q
    |||||||||||||||| ||| | | ||||| ||||||||| ||||||||||||| ||||| | || || | ||||| ||||||| ||| |||||||||||    
T  1205956 ggactaaatccaccccttcacacctaacacgatgaaggtgctggaggctgcaatgaaggcaacccaaatgccgcaa-ttaggcggctaggggcggaccgc 1206054  T
Q  121 aattaaggtggaatttccaaca 142  Q
    ||| ||||  ||||||||||||    
T  1206055 aatgaaggcagaatttccaaca 1206076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 32216233 - 32216175
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||| |||||| |||||    
T  32216233 gactaaatccaccccctaaaagcaaacacaatgaaagtgttggaggttgcaatgaaggc 32216175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 1205639 - 1205762
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    |||||||| |||||||||| ||| | ||||||||||||| |||||| |||||||||| ||||  | || || | | ||| ||||||| ||| ||| ||||    
T  1205639 gtgggactgaatccaccccttcacacccaacacaatgaaagtgttgtaggctgcaatgaaggaaacccaaatgccacaa-ttaggcggctaggggtggac 1205737  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
     ||||| ||||||||||||||||||    
T  1205738 tgcaatgaaggtggaatttccaaca 1205762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 130761 - 130819
Alignment:
Q  24 actaaatccaccccctcaaagccaacacaatgaagg-tgttggaggctgcaattaaggc 81  Q
    |||||||||||||| ||| | ||||||||||||||| |||||||||||||||| |||||    
T  130761 actaaatccaccccttcacacccaacacaatgaaggttgttggaggctgcaatgaaggc 130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 26809254 - 26809288
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaa 53  Q
    |||||||||||||||||||||||||||||||||||    
T  26809254 gtgggactaaatccaccccctcaaagccaacacaa 26809288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 11160427 - 11160394
Alignment:
Q  20 tgggactaaatccaccccctcaaagccaacacaa 53  Q
    ||||||||||||||||||||||||||||||||||    
T  11160427 tgggactaaatccaccccctcaaagccaacacaa 11160394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 11199008 - 11198975
Alignment:
Q  20 tgggactaaatccaccccctcaaagccaacacaa 53  Q
    ||||||||||||||||||||||||||||||||||    
T  11199008 tgggactaaatccaccccctcaaagccaacacaa 11198975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 9156190 - 9156246
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaat 75  Q
    |||||| |||||||||||| ||||| | |||||| ||||||||||||||| ||||||    
T  9156190 gtgggaataaatccaccccttcaaacctaacacagtgaaggtgttggaggatgcaat 9156246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 18286901 - 18286845
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaat 75  Q
    ||||||||||||| ||||| ||| | |||||||  ||||||||||||||| ||||||    
T  18286901 gtgggactaaatcaaccccttcacacccaacacggtgaaggtgttggaggatgcaat 18286845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 31305744 - 31305602
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  31305744 gagtgctatctatcggatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaattt 31305645  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||    
T  31305644 aggcgactaggggtggaccgcaattaaggcggaatttccaaca 31305602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 17419820 - 17419678
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||     
T  17419820 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgtttgaggctgcaattaaggctaaccaaaggtcgcaatta 17419721  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||| |||| |||| ||||||||| |||||||||||||    
T  17419720 aggcgactaggggcagaccacaattaaggcggaatttccaaca 17419678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 19937120 - 19937256
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  19937120 tatctatccgatgtgggactaaatccaccccatcaaagccaacacaatgaaggtgttggaggatgcaattaaggctaaccaaaggtcgcaatttaggcga 19937219  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
     || ||||||||| |||||||||  ||||||||||||    
T  19937220 ttaggggcggaccacaattaaggcagaatttccaaca 19937256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 20735549 - 20735413
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  20735549 tatctatctgatgtgggattaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcga 20735450  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| |||| |||||||||||||| ||||||| |||||    
T  20735449 ctaggggcagaccgcaattaaggcggaattttcaaca 20735413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 8520164 - 8520292
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  8520164 gagtgctatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggggttggaggctgcaatgaaggctaaccaaaggtcgcaattt 8520263  T
Q  101 aggcgacta-gggcggaccgcaattaagg 128  Q
    ||| ||||| ||||  |||||||||||||    
T  8520264 aggtgactaggggcaaaccgcaattaagg 8520292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 35926299 - 35926434
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    |||||||| || ||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  35926299 tatctatctgatgtgggactaaatcaaaccc-tcaaagccaacacaatgaaggtgttggaggttgcaatgaaggctaaccaaaggtcgcaatttaggcga 35926397  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||||||||||||||||| |||||||||||||    
T  35926398 ctaggggcggaccgcaattaaggcggaatttccaaca 35926434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 45264690 - 45264554
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||| ||||||||||||||    
T  45264690 tatctattcgacgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaaagaaggcaaaccaaaggccgcaatttaggcga 45264591  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    | | |||||||||||||| ||||  ||||||||||||    
T  45264590 caaggggcggaccgcaataaaggcagaatttccaaca 45264554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 4022202 - 4022340
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  ||||| |||| |||| ||||||||||||||    
T  4022202 tatctatccgatgtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggttgcgacgaaggcaaaccaaaggccgcaatttaggcga 4022301  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaacatt 144  Q
    | | |||||||||||||| |||| | |||||||||||||    
T  4022302 caaggggcggaccgcaataaaggcgaaatttccaacatt 4022340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 8520342 - 8520448
Alignment:
Q  37 cctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgcaattaaggtggaatt 135  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  8520342 cctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggctaaccaaaggtcgcaatttaggcgactaggggcggaccgcaattaaagcggaatt 8520441  T
Q  136 tccaaca 142  Q
    |||||||    
T  8520442 tccaaca 8520448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 33879849 - 33879991
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||| |||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  33879849 gagtgctatatatctgatgtgggactaaatccaccctctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggtcgcaattt 33879948  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||| ||| |||||||||| |||| || ||||||||||    
T  33879949 aggtgactaggggtggaccgcaataaaggcggtatttccaaca 33879991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33964406 - 33964264
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaattt 100  Q
    ||||| ||| |||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  33964406 gagtgctatatatctgatgtgggactaaatccaccctctcaaagccaacacaatgaaggtgttggaggctgcaatgaaggcaaaccaaaggtcgcaattt 33964307  T
Q  101 aggcgacta-gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||| ||||| ||| |||||||||| |||| || ||||||||||    
T  33964306 aggtgactaggggtggaccgcaataaaggcggtatttccaaca 33964264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 2697408 - 2697544
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| | |||| |||| | ||||||||||||    
T  2697408 tatctatccgatgtgggactaaatccaccccctcaaagccgtcacaatgaaggtgttggaggctgcaatgaagacaaaccaaaggcctcaatttaggcga 2697507  T
Q  107 ct-agggcggaccgcaattaaggtggaatttccaaca 142  Q
    || |||| |||||||||| |||| |||||||||||||    
T  2697508 ctaagggtggaccgcaataaaggcggaatttccaaca 2697544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 15013536 - 15013416
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggaccgca 121  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| ||| | |||||||||||||||||||||| ||||||||||||    
T  15013536 gactaaattcaccccctcaaagccaacacaatgaaggtgttggaggttgcaatgaaggttaatcaaaggtcgcaatttaggcgactaggggcggaccgca 15013437  T
Q  122 attaaggtggaatttccaaca 142  Q
    | |||||  ||||||||||||    
T  15013436 actaaggcagaatttccaaca 15013416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43423312 - 43423232
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43423312 gagtgttatctatccgatgtgggaataaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaatttaggc 43423232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 19459738 - 19459615
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagggcggacc 118  Q
    ||||||||||| ||||||||||| | ||||||||||||||| |||||||||||||||| |||| | || || | ||||| | ||||  ||||||| |||     
T  19459738 gtgggactaaacccaccccctcacacccaacacaatgaaggagttggaggctgcaatttaggcaacccaaatgccgcaagtaaggcagctagggcagaca 19459639  T
Q  119 gcaattaaggtggaatttccaaca 142  Q
     ||||||||| |||||||||||||    
T  19459638 ccaattaaggcggaatttccaaca 19459615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 37600905 - 37600822
Alignment:
Q  1 gagtgttatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggct-gcaattaaggcta 83  Q
    ||||||||||||||| | | ||||||||||||||||||| ||||||| | |||||||||||||||||||| ||||| |||||||    
T  37600905 gagtgttatctatccaatgagggactaaatccacccccttaaagccagcgcaatgaaggtgttggaggctggcaatgaaggcta 37600822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 6868148 - 6868025
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgacta-gggcggac 117  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||| | | ||| | || || |  |||| |||||||| || |||| |||    
T  6868148 gtgggactaaatccaccccttcaaacccaacaaaatgaaggtgttggaggctgcagtgagggcaacccaaatgctgcaa-ttaggcgattaggggcagac 6868050  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    |||||| |||| |||||||||||||    
T  6868049 cgcaatgaaggcggaatttccaaca 6868025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 41590317 - 41590439
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcgactagg-gcggac 117  Q
    |||| |||||| ||||||| ||| | || |||||||||||||||||||||||||||| ||||| |||| ||   ||||| ||||||| ||||| ||||||    
T  41590317 gtggaactaaacccaccccttcacacccgacacaatgaaggtgttggaggctgcaatgaaggc-aacccaattccgcaa-ttaggcggctaggtgcggac 41590414  T
Q  118 cgcaattaaggtggaatttccaaca 142  Q
    |||||| |||| ||||||| |||||    
T  41590415 cgcaatgaaggcggaattttcaaca 41590439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 51188903 - 51188948
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttg 64  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  51188903 gtgggactaaatccaccccttcaaacccaacacaatgaaggtgttg 51188948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 34626867 - 34626925
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    |||||||||||| || ||| | |||||| |||||||||||||||||||||||| |||||    
T  34626867 gactaaatccactccttcacacccaacagaatgaaggtgttggaggctgcaatgaaggc 34626925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 14623196 - 14623160
Alignment:
Q  45 ccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14623196 ccaacacaatgaaggtgttggaggctgcaatgaaggc 14623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 51515727 - 51515667
Alignment:
Q  22 ggactaaatccaccccct-caaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    |||||||||||||||| | || | ||||||||||||||||||||||||| ||||| |||||    
T  51515727 ggactaaatccacccctttcacacccaacacaatgaaggtgttggaggcagcaatgaaggc 51515667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 12410420 - 12410365
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaa 74  Q
    ||||||||||||| || || ||| | ||||||| ||||||||||||||||||||||    
T  12410420 gtgggactaaatcaactccttcacacccaacacgatgaaggtgttggaggctgcaa 12410365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 19811100 - 19811162
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||||||||||||  | ||| | ||||||||| ||||| ||||||||||||||| |||||    
T  19811100 gtgggactaaatccacatcttcacacccaacacaacgaaggagttggaggctgcaatgaaggc 19811162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 41590621 - 41590663
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtg 61  Q
    |||||||||||| |||||||||| | |||||||||||||||||    
T  41590621 gtgggactaaattcaccccctcacacccaacacaatgaaggtg 41590663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 2104337 - 2104374
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaag 44  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  2104337 tatctaaccgatgtgggactaaatccaccccctcaaag 2104374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 40566356 - 40566417
Alignment:
Q  20 tgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggc 81  Q
    ||||||| |||||| ||| ||| | |||||||||||||||||||||| |||| ||| |||||    
T  40566356 tgggactgaatccatcccttcacacccaacacaatgaaggtgttggaagctgtaatgaaggc 40566417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 463228 - 463264
Alignment:
Q  8 atctatccgaagtgggactaaatccaccccctcaaag 44  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  463228 atctaaccgatgtgggactaaatccaccccctcaaag 463264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 18998726 - 18998670
Alignment:
Q  19 gtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaat 75  Q
    ||||||||||||||||||  ||| | ||||||||  ||||||||||| |||||||||    
T  18998726 gtgggactaaatccaccctttcacacccaacacatcgaaggtgttggtggctgcaat 18998670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 33248423 - 33248499
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatt 99  Q
    ||||||||||||||  | | | |||||||||||||||||||||||  ||||||||| || | ||||| | |||||||    
T  33248423 gactaaatccacccgttaacacccaacacaatgaaggtgttggagattgcaattaatgcaacccgaatgccgcaatt 33248499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 33268595 - 33268671
Alignment:
Q  23 gactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatt 99  Q
    ||||||||||||||  | | | |||||||||||||||||||||||  ||||||||| || | ||||| | |||||||    
T  33268595 gactaaatccacccgttaacacccaacacaatgaaggtgttggagattgcaattaatgcaacccgaatgccgcaatt 33268671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 142
Target Start/End: Complemental strand, 37600820 - 37600788
Alignment:
Q  110 gggcggaccgcaattaaggtggaatttccaaca 142  Q
    ||||||||||||||||||| |||||||||||||    
T  37600820 gggcggaccgcaattaaggcggaatttccaaca 37600788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 11104 - 11238
Alignment:
Q  7 tatctatccgaagtgggactaaatccaccccctcaaagccaacacaatgaaggtgttggaggctgcaattaaggctaaccgaaggtcgcaatttaggcga 106  Q
    ||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||    
T  11104 tatctatccaatgtgggacaaaatccagcccctcaaagccaacacaatgaaggtgttagaggctgtaatgaaggcaaaccaaaggtcgcaatttaggcga 11203  T
Q  107 cta-gggcggaccgcaattaaggtggaatttccaa 140  Q
    ||| ||||| |||| ||| ||||||||||||||||    
T  11204 ctaggggcgtaccgtaataaaggtggaatttccaa 11238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 30710 - 30582
Alignment:
Q  19 gtgggactaaatcca--ccccctcaaagccaacacaatgaaggtgttggaggctgcaat-taaggctaaccgaaggtcgcaatttaggcgacta-gggcg 114  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||| | ||||||  ||||  |||| || |||||||||||||||| || |||||    
T  30710 gtgggactaaatcccacccccctcaaagccaacacaatgaaggtgttggaagttgcaatggaaggtaaaccaaatgtcgcaatttaggcgattaggggcg 30611  T
Q  115 gaccgcaat-taaggtggaatttccaaca 142  Q
    |||||||||  ||||||||||||| ||||    
T  30610 gaccgcaataaaaggtggaatttcgaaca 30582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1951 times since January 2019
Visitors: 2394