View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0238_high_50 (Length: 208)
Name: NF0238_high_50
Description: NF0238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0238_high_50 |
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Alignment Details
Target: chr8 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 11027970 - 11028094
Alignment:
| Q |
19 |
atctggtactttctaaaattataactggcatggatggcagtaaaacaagttatttccattgaacccaaaaaataaaataagaaccactttatttaatcta |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11027970 |
atctggtactttctaaaattataactggcatggatggcagtaaaacaagttatttccattgaacccaaaaaataaaataagaaccactttatttaatcta |
11028069 |
T |
|
| Q |
119 |
acaattaattattaacatttgcatt |
143 |
Q |
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|||||||| |||||||||||||||| |
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| T |
11028070 |
acaattaactattaacatttgcatt |
11028094 |
T |
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