View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0243_high_12 (Length: 451)

Name: NF0243_high_12
Description: NF0243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0243_high_12
NF0243_high_12
[»] chr6 (47 HSPs)
chr6 (26-438)||(1240423-1240825)
chr6 (344-438)||(1172119-1172213)
chr6 (152-306)||(32675818-32675971)
chr6 (114-241)||(1172410-1172545)
chr6 (134-306)||(10755194-10755362)
chr6 (154-306)||(6776812-6776963)
chr6 (151-306)||(23239251-23239405)
chr6 (151-236)||(6752885-6752970)
chr6 (130-306)||(2027084-2027258)
chr6 (149-306)||(6758631-6758788)
chr6 (149-237)||(32165187-32165275)
chr6 (151-299)||(2040109-2040261)
chr6 (134-306)||(8014792-8014963)
chr6 (134-236)||(9202310-9202412)
chr6 (155-306)||(21891270-21891420)
chr6 (148-306)||(2034154-2034311)
chr6 (149-306)||(2255738-2255895)
chr6 (167-306)||(25430710-25430845)
chr6 (134-238)||(35071339-35071443)
chr6 (134-306)||(7267779-7267957)
chr6 (134-306)||(21871195-21871365)
chr6 (249-306)||(21025252-21025309)
chr6 (140-236)||(9201638-9201734)
chr6 (249-300)||(24625861-24625912)
chr6 (163-237)||(22708358-22708432)
chr6 (249-306)||(3211026-3211083)
chr6 (249-306)||(10054385-10054442)
chr6 (140-306)||(10687311-10687478)
chr6 (249-306)||(12817117-12817174)
chr6 (249-306)||(30533984-30534041)
chr6 (149-237)||(1189455-1189543)
chr6 (149-306)||(29052337-29052492)
chr6 (149-306)||(29623404-29623559)
chr6 (151-237)||(34223452-34223539)
chr6 (144-229)||(12816822-12816908)
chr6 (149-237)||(32615341-32615429)
chr6 (128-285)||(6958649-6958804)
chr6 (249-300)||(9894776-9894827)
chr6 (154-237)||(9894847-9894930)
chr6 (150-237)||(17300681-17300768)
chr6 (135-194)||(20776469-20776528)
chr6 (151-237)||(10184258-10184344)
chr6 (249-306)||(6632663-6632720)
chr6 (261-306)||(9201768-9201813)
chr6 (149-237)||(1468246-1468333)
chr6 (149-237)||(4808643-4808731)
chr6 (140-168)||(7446780-7446808)
[»] chr1 (71 HSPs)
chr1 (125-300)||(4068125-4068299)
chr1 (134-306)||(48819303-48819474)
chr1 (134-305)||(37712073-37712242)
chr1 (134-298)||(15515258-15515421)
chr1 (145-300)||(16888891-16889041)
chr1 (144-305)||(37329333-37329493)
chr1 (134-306)||(45267469-45267637)
chr1 (149-300)||(13038957-13039107)
chr1 (134-293)||(28690021-28690179)
chr1 (134-300)||(26988158-26988323)
chr1 (125-295)||(41196612-41196781)
chr1 (164-299)||(6337697-6337831)
chr1 (134-306)||(35897530-35897705)
chr1 (189-306)||(3069820-3069936)
chr1 (151-305)||(46689478-46689631)
chr1 (157-237)||(31249754-31249834)
chr1 (134-299)||(41130005-41130169)
chr1 (134-299)||(1565286-1565457)
chr1 (144-306)||(35590134-35590296)
chr1 (151-306)||(36422909-36423063)
chr1 (151-300)||(9572712-9572861)
chr1 (134-306)||(10082254-10082426)
chr1 (150-306)||(32497199-32497353)
chr1 (134-299)||(26946015-26946180)
chr1 (134-238)||(28870274-28870378)
chr1 (141-306)||(1005344-1005508)
chr1 (144-305)||(10365176-10365335)
chr1 (130-237)||(26435082-26435189)
chr1 (134-298)||(47413385-47413547)
chr1 (249-306)||(18327528-18327585)
chr1 (157-237)||(8061943-8062023)
chr1 (149-237)||(8410205-8410293)
chr1 (149-237)||(17814262-17814350)
chr1 (249-300)||(10850096-10850147)
chr1 (150-237)||(17628352-17628439)
chr1 (140-233)||(391251-391345)
chr1 (151-237)||(42591454-42591540)
chr1 (150-235)||(15791457-15791542)
chr1 (249-306)||(31378776-31378833)
chr1 (149-237)||(14460967-14461055)
chr1 (149-237)||(15235087-15235175)
chr1 (149-237)||(16708871-16708958)
chr1 (149-237)||(25485820-25485908)
chr1 (168-306)||(35282539-35282676)
chr1 (134-234)||(42367026-42367125)
chr1 (150-237)||(5347226-5347313)
chr1 (182-237)||(12256678-12256733)
chr1 (182-237)||(19284970-19285025)
chr1 (151-237)||(19395846-19395932)
chr1 (249-306)||(26936863-26936919)
chr1 (149-237)||(17348950-17349038)
chr1 (149-237)||(19220245-19220333)
chr1 (260-300)||(39941380-39941420)
chr1 (260-300)||(39941451-39941491)
chr1 (149-299)||(46473105-46473254)
chr1 (260-306)||(391172-391219)
chr1 (150-237)||(3115989-3116076)
chr1 (263-306)||(22593446-22593489)
chr1 (182-306)||(41003391-41003514)
chr1 (268-306)||(20169268-20169306)
chr1 (151-237)||(41576323-41576409)
chr1 (182-228)||(49822817-49822863)
chr1 (249-306)||(1265718-1265775)
chr1 (145-230)||(9575407-9575492)
chr1 (249-306)||(15631908-15631965)
chr1 (156-237)||(22103181-22103262)
chr1 (249-282)||(23544819-23544852)
chr1 (249-306)||(51409732-51409789)
chr1 (268-300)||(8410159-8410191)
chr1 (153-237)||(22593337-22593421)
chr1 (260-300)||(39941520-39941560)
[»] chr4 (86 HSPs)
chr4 (131-306)||(48591332-48591506)
chr4 (134-287)||(17222852-17223004)
chr4 (145-306)||(23297442-23297599)
chr4 (134-306)||(12495555-12495728)
chr4 (125-306)||(28074369-28074548)
chr4 (134-306)||(36740908-36741079)
chr4 (125-305)||(29877644-29877825)
chr4 (127-306)||(38345727-38345903)
chr4 (151-296)||(41228917-41229061)
chr4 (134-306)||(7148776-7148946)
chr4 (134-306)||(23335646-23335817)
chr4 (154-294)||(46704201-46704340)
chr4 (134-306)||(488295-488466)
chr4 (134-299)||(948083-948250)
chr4 (134-237)||(48687006-48687108)
chr4 (142-306)||(896974-897137)
chr4 (131-295)||(32628793-32628956)
chr4 (134-306)||(42611779-42611950)
chr4 (156-305)||(18424211-18424358)
chr4 (149-290)||(18630821-18630961)
chr4 (135-238)||(36254948-36255051)
chr4 (144-241)||(2330394-2330491)
chr4 (123-238)||(22273851-22273967)
chr4 (144-237)||(34526258-34526351)
chr4 (249-306)||(43699508-43699565)
chr4 (149-237)||(4603258-4603346)
chr4 (149-229)||(9153508-9153588)
chr4 (149-237)||(15179889-15179977)
chr4 (149-236)||(19725366-19725454)
chr4 (150-237)||(39931471-39931558)
chr4 (150-237)||(42617157-42617244)
chr4 (149-235)||(11298656-11298742)
chr4 (134-232)||(42153073-42153171)
chr4 (249-306)||(35124391-35124448)
chr4 (203-306)||(52274100-52274202)
chr4 (149-237)||(15184618-15184706)
chr4 (134-238)||(41071421-41071525)
chr4 (145-241)||(43213437-43213532)
chr4 (134-238)||(48667741-48667845)
chr4 (219-306)||(1374358-1374445)
chr4 (249-299)||(3564231-3564281)
chr4 (134-200)||(3564315-3564381)
chr4 (256-306)||(8130492-8130542)
chr4 (154-228)||(8130560-8130634)
chr4 (249-287)||(21216353-21216391)
chr4 (183-237)||(22303167-22303221)
chr4 (260-306)||(27368188-27368234)
chr4 (198-306)||(39932729-39932836)
chr4 (143-229)||(43699369-43699455)
chr4 (249-306)||(212973-213029)
chr4 (134-179)||(23297406-23297451)
chr4 (134-277)||(28663606-28663747)
chr4 (141-238)||(35405755-35405851)
chr4 (127-240)||(48721889-48722002)
chr4 (149-237)||(2547973-2548061)
chr4 (249-297)||(4331350-4331398)
chr4 (256-300)||(8057120-8057164)
chr4 (149-237)||(19414187-19414275)
chr4 (149-237)||(22117425-22117513)
chr4 (263-299)||(29615385-29615421)
chr4 (149-237)||(47202897-47202985)
chr4 (260-300)||(48686959-48686999)
chr4 (128-179)||(1374436-1374487)
chr4 (150-237)||(11679054-11679141)
chr4 (150-237)||(11687333-11687420)
chr4 (135-300)||(18258021-18258178)
chr4 (182-237)||(23284750-23284805)
chr4 (151-241)||(2702643-2702733)
chr4 (160-238)||(11256598-11256676)
chr4 (263-305)||(29996678-29996720)
chr4 (144-206)||(30956787-30956849)
chr4 (249-299)||(35010222-35010272)
chr4 (125-179)||(35124346-35124400)
chr4 (140-194)||(40699330-40699384)
chr4 (263-305)||(55638120-55638162)
chr4 (249-306)||(825686-825743)
chr4 (261-298)||(38515689-38515726)
chr4 (155-208)||(38876054-38876107)
chr4 (263-300)||(43415328-43415365)
chr4 (133-233)||(4331406-4331506)
chr4 (249-289)||(29997335-29997375)
chr4 (249-300)||(30956692-30956744)
chr4 (189-241)||(34633459-34633510)
chr4 (134-166)||(43699569-43699601)
chr4 (250-306)||(43983408-43983464)
chr4 (269-305)||(46650276-46650312)
[»] chr2 (56 HSPs)
chr2 (125-300)||(33321214-33321388)
chr2 (141-306)||(4026930-4027093)
chr2 (134-292)||(36501426-36501583)
chr2 (134-306)||(887416-887587)
chr2 (151-307)||(21788460-21788615)
chr2 (144-306)||(25836634-25836794)
chr2 (143-306)||(4004823-4004985)
chr2 (134-300)||(8832464-8832632)
chr2 (140-285)||(38216044-38216188)
chr2 (149-288)||(39592271-39592407)
chr2 (126-306)||(29774749-29774928)
chr2 (144-286)||(4533346-4533487)
chr2 (151-306)||(11776988-11777142)
chr2 (145-241)||(7480821-7480917)
chr2 (149-237)||(8441530-8441618)
chr2 (134-305)||(13056238-13056408)
chr2 (157-237)||(35515429-35515509)
chr2 (208-300)||(755726-755818)
chr2 (249-306)||(33321428-33321485)
chr2 (249-306)||(34913415-34913472)
chr2 (149-299)||(15155824-15155973)
chr2 (149-237)||(22898283-22898371)
chr2 (134-306)||(5903537-5903713)
chr2 (190-306)||(12238453-12238565)
chr2 (249-306)||(2790095-2790153)
chr2 (256-306)||(4090493-4090543)
chr2 (249-306)||(11072949-11073007)
chr2 (208-300)||(12223862-12223953)
chr2 (149-235)||(32521972-32522058)
chr2 (151-237)||(38471719-38471805)
chr2 (161-297)||(42839259-42839393)
chr2 (134-179)||(2790144-2790189)
chr2 (134-179)||(5903745-5903790)
chr2 (259-300)||(35731148-35731189)
chr2 (125-206)||(37420009-37420090)
chr2 (261-305)||(12683643-12683687)
chr2 (266-306)||(27703500-27703540)
chr2 (261-305)||(29133704-29133748)
chr2 (249-292)||(12442831-12442874)
chr2 (141-172)||(37409780-37409811)
chr2 (220-305)||(43787800-43787884)
chr2 (151-237)||(446499-446585)
chr2 (131-165)||(14365230-14365264)
chr2 (156-237)||(2401555-2401636)
chr2 (120-177)||(12442934-12442991)
chr2 (125-217)||(22422071-22422163)
chr2 (269-306)||(41554625-41554662)
chr2 (125-238)||(42382691-42382804)
chr2 (130-179)||(43787739-43787788)
chr2 (262-294)||(27243575-27243607)
chr2 (149-233)||(30382195-30382279)
chr2 (249-305)||(37419989-37420044)
chr2 (135-240)||(38010582-38010689)
chr2 (189-237)||(40301431-40301479)
chr2 (256-300)||(42382622-42382666)
chr2 (182-230)||(44475478-44475526)
[»] chr8 (47 HSPs)
chr8 (148-306)||(32975691-32975848)
chr8 (144-299)||(34286485-34286638)
chr8 (146-306)||(32131444-32131603)
chr8 (144-305)||(24350440-24350600)
chr8 (134-306)||(28879062-28879230)
chr8 (134-305)||(10298838-10299007)
chr8 (134-300)||(16972267-16972433)
chr8 (154-306)||(9131059-9131210)
chr8 (134-306)||(32212926-32213104)
chr8 (134-238)||(10213766-10213870)
chr8 (149-306)||(41145322-41145480)
chr8 (151-306)||(19925561-19925715)
chr8 (149-237)||(29218177-29218265)
chr8 (249-295)||(35168466-35168512)
chr8 (149-235)||(37410839-37410925)
chr8 (151-306)||(2669652-2669806)
chr8 (260-305)||(13265489-13265534)
chr8 (249-306)||(35453414-35453471)
chr8 (149-237)||(35055494-35055581)
chr8 (149-306)||(38895663-38895819)
chr8 (149-240)||(9788879-9788969)
chr8 (157-240)||(25333635-25333718)
chr8 (150-237)||(38338778-38338865)
chr8 (153-297)||(14942437-14942580)
chr8 (149-235)||(42102180-42102266)
chr8 (149-238)||(24866877-24866966)
chr8 (249-305)||(1089018-1089074)
chr8 (149-237)||(11988268-11988356)
chr8 (149-237)||(12607151-12607239)
chr8 (261-305)||(13131435-13131479)
chr8 (134-190)||(15763207-15763263)
chr8 (157-241)||(25465781-25465865)
chr8 (149-217)||(28280801-28280869)
chr8 (134-172)||(10480029-10480067)
chr8 (126-179)||(32131400-32131453)
chr8 (249-306)||(35285932-35285989)
chr8 (149-241)||(14262394-14262486)
chr8 (263-306)||(19327871-19327914)
chr8 (151-241)||(9782251-9782340)
chr8 (134-172)||(11460785-11460823)
chr8 (268-306)||(29243107-29243145)
chr8 (151-241)||(32924139-32924230)
chr8 (168-241)||(9130962-9131035)
chr8 (134-171)||(11460841-11460878)
chr8 (134-231)||(24087249-24087346)
chr8 (271-300)||(34102733-34102762)
chr8 (249-305)||(14709561-14709617)
[»] chr7 (54 HSPs)
chr7 (134-306)||(29390462-29390632)
chr7 (125-306)||(29378649-29378829)
chr7 (140-306)||(34922935-34923102)
chr7 (151-306)||(44613401-44613555)
chr7 (143-300)||(14691219-14691376)
chr7 (134-306)||(47511047-47511220)
chr7 (134-306)||(38372562-38372733)
chr7 (144-305)||(20888578-20888739)
chr7 (131-300)||(30181560-30181727)
chr7 (134-238)||(33287986-33288090)
chr7 (149-306)||(22032766-22032922)
chr7 (149-237)||(1312185-1312273)
chr7 (134-237)||(25908366-25908469)
chr7 (182-305)||(48021607-48021728)
chr7 (249-306)||(41037757-41037813)
chr7 (151-228)||(43818806-43818883)
chr7 (149-237)||(991571-991659)
chr7 (134-237)||(40629344-40629446)
chr7 (134-228)||(33204915-33205009)
chr7 (151-237)||(47654342-47654428)
chr7 (207-305)||(41094223-41094318)
chr7 (149-307)||(22575589-22575746)
chr7 (134-240)||(18765022-18765129)
chr7 (154-237)||(23137094-23137177)
chr7 (259-306)||(33288134-33288181)
chr7 (150-233)||(49104295-49104378)
chr7 (140-218)||(5947669-5947747)
chr7 (150-237)||(24371353-24371436)
chr7 (151-307)||(35809093-35809248)
chr7 (134-281)||(39279458-39279605)
chr7 (256-306)||(40629449-40629498)
chr7 (151-237)||(44799474-44799560)
chr7 (249-305)||(7098125-7098181)
chr7 (149-237)||(7774673-7774761)
chr7 (154-234)||(16012773-16012853)
chr7 (256-300)||(18837232-18837276)
chr7 (144-200)||(25655674-25655730)
chr7 (144-227)||(32848612-32848696)
chr7 (250-306)||(41677378-41677434)
chr7 (150-237)||(16932857-16932944)
chr7 (150-237)||(16938240-16938327)
chr7 (150-237)||(16958887-16958974)
chr7 (150-237)||(35246741-35246828)
chr7 (249-300)||(48895306-48895357)
chr7 (272-306)||(1054116-1054150)
chr7 (268-306)||(21249160-21249198)
chr7 (249-299)||(23356516-23356566)
chr7 (153-288)||(37465816-37465951)
chr7 (264-306)||(41094151-41094193)
chr7 (249-299)||(42083442-42083492)
chr7 (134-179)||(18704307-18704352)
chr7 (149-237)||(19914017-19914105)
chr7 (144-200)||(22515463-22515519)
chr7 (259-299)||(24414534-24414574)
[»] chr3 (56 HSPs)
chr3 (140-306)||(40580993-40581159)
chr3 (149-306)||(40240503-40240659)
chr3 (134-298)||(53217952-53218114)
chr3 (134-306)||(43079845-43080016)
chr3 (134-306)||(22809104-22809276)
chr3 (134-305)||(585025-585194)
chr3 (131-300)||(48597774-48597943)
chr3 (134-241)||(20685853-20685960)
chr3 (203-306)||(52021250-52021353)
chr3 (151-299)||(32901076-32901223)
chr3 (249-300)||(52421166-52421217)
chr3 (155-299)||(34707645-34707788)
chr3 (134-300)||(3845865-3846030)
chr3 (149-237)||(17752057-17752145)
chr3 (149-237)||(19053377-19053465)
chr3 (208-298)||(29270373-29270462)
chr3 (149-237)||(29614265-29614353)
chr3 (145-241)||(52895327-52895423)
chr3 (189-306)||(3870192-3870308)
chr3 (182-306)||(1516057-1516179)
chr3 (149-235)||(3645376-3645462)
chr3 (149-235)||(21720981-21721067)
chr3 (182-300)||(42956138-42956255)
chr3 (149-299)||(43971773-43971922)
chr3 (249-300)||(10521164-10521215)
chr3 (249-300)||(10667408-10667459)
chr3 (149-306)||(51409397-51409552)
chr3 (150-237)||(29830564-29830653)
chr3 (151-241)||(33946478-33946568)
chr3 (149-299)||(3876189-3876338)
chr3 (249-305)||(5129840-5129896)
chr3 (144-200)||(32983212-32983268)
chr3 (149-237)||(37243538-37243626)
chr3 (132-231)||(53261676-53261776)
chr3 (149-235)||(20894576-20894662)
chr3 (134-212)||(46573365-46573443)
chr3 (157-300)||(47403696-47403839)
chr3 (220-306)||(24842104-24842189)
chr3 (140-233)||(30321647-30321739)
chr3 (164-299)||(45331236-45331370)
chr3 (149-241)||(20174866-20174958)
chr3 (150-306)||(4257225-4257383)
chr3 (265-300)||(10272132-10272167)
chr3 (145-212)||(31787619-31787686)
chr3 (150-237)||(37778205-37778292)
chr3 (260-306)||(7292684-7292730)
chr3 (151-237)||(25341342-25341428)
chr3 (249-298)||(29002726-29002773)
chr3 (251-305)||(36266249-36266303)
chr3 (151-237)||(38524160-38524246)
chr3 (134-172)||(50540426-50540464)
chr3 (249-306)||(10448778-10448835)
chr3 (130-179)||(53261820-53261869)
chr3 (249-305)||(21296771-21296827)
chr3 (273-305)||(23555489-23555521)
chr3 (181-237)||(29830716-29830772)
[»] chr5 (71 HSPs)
chr5 (140-306)||(28625484-28625648)
chr5 (134-305)||(12467269-12467443)
chr5 (140-305)||(29922106-29922270)
chr5 (134-298)||(1868858-1869016)
chr5 (142-306)||(41059708-41059871)
chr5 (125-294)||(40452379-40452548)
chr5 (134-300)||(1576641-1576806)
chr5 (134-300)||(1608009-1608174)
chr5 (129-295)||(31636997-31637165)
chr5 (145-306)||(42852026-42852185)
chr5 (148-306)||(24030219-24030375)
chr5 (134-306)||(40697005-40697181)
chr5 (140-287)||(5559836-5559985)
chr5 (143-276)||(2577348-2577481)
chr5 (125-299)||(22201833-22202011)
chr5 (134-306)||(10537137-10537301)
chr5 (131-305)||(41534628-41534806)
chr5 (189-306)||(13060568-13060684)
chr5 (134-306)||(35536846-35537019)
chr5 (143-237)||(1943067-1943161)
chr5 (159-306)||(13625456-13625603)
chr5 (249-306)||(1473360-1473417)
chr5 (149-299)||(6144749-6144898)
chr5 (167-306)||(17657246-17657384)
chr5 (149-237)||(29659132-29659220)
chr5 (144-299)||(14243834-14243990)
chr5 (249-306)||(12987039-12987096)
chr5 (134-299)||(6125298-6125461)
chr5 (149-237)||(29418678-29418766)
chr5 (250-306)||(42706800-42706856)
chr5 (142-298)||(11912021-11912176)
chr5 (134-217)||(41125766-41125849)
chr5 (151-240)||(7565192-7565281)
chr5 (249-306)||(43268646-43268703)
chr5 (149-237)||(26003069-26003157)
chr5 (182-280)||(41419531-41419628)
chr5 (168-300)||(7364254-7364385)
chr5 (150-237)||(16722098-16722185)
chr5 (134-237)||(39154672-39154775)
chr5 (140-199)||(42558634-42558693)
chr5 (249-306)||(17128282-17128339)
chr5 (151-235)||(9477410-9477494)
chr5 (134-306)||(2878587-2878758)
chr5 (249-300)||(3977485-3977536)
chr5 (131-238)||(7364075-7364182)
chr5 (150-237)||(20458485-20458572)
chr5 (130-169)||(22573779-22573818)
chr5 (134-225)||(35083323-35083414)
chr5 (149-299)||(38461206-38461357)
chr5 (256-306)||(1943014-1943064)
chr5 (131-237)||(2670132-2670237)
chr5 (134-232)||(11163193-11163291)
chr5 (124-300)||(11706812-11706994)
chr5 (250-300)||(43265967-43266017)
chr5 (145-240)||(589221-589317)
chr5 (249-305)||(2670080-2670136)
chr5 (251-299)||(3520530-3520577)
chr5 (263-299)||(11991316-11991352)
chr5 (134-237)||(27805987-27806091)
chr5 (130-238)||(29136731-29136841)
chr5 (260-306)||(7984109-7984155)
chr5 (249-299)||(11163294-11163344)
chr5 (134-200)||(17868115-17868181)
chr5 (249-306)||(17868201-17868259)
chr5 (250-287)||(6150400-6150437)
chr5 (134-179)||(13739359-13739404)
chr5 (249-306)||(25332263-25332320)
chr5 (134-238)||(6150863-6150966)
chr5 (221-294)||(18602618-18602691)
chr5 (249-305)||(26003002-26003058)
chr5 (149-237)||(40152802-40152890)
[»] scaffold0157 (1 HSPs)
scaffold0157 (134-306)||(24749-24922)
[»] scaffold1367 (1 HSPs)
scaffold1367 (149-306)||(1062-1218)
[»] scaffold0299 (1 HSPs)
scaffold0299 (149-306)||(11227-11382)
[»] scaffold0041 (2 HSPs)
scaffold0041 (207-305)||(108978-109073)
scaffold0041 (264-306)||(109103-109145)
[»] scaffold0024 (1 HSPs)
scaffold0024 (249-306)||(97231-97288)
[»] scaffold0012 (1 HSPs)
scaffold0012 (149-306)||(178504-178662)
[»] scaffold0512 (1 HSPs)
scaffold0512 (151-299)||(4076-4222)
[»] scaffold0332 (1 HSPs)
scaffold0332 (268-306)||(14790-14828)
[»] scaffold0057 (2 HSPs)
scaffold0057 (256-306)||(24421-24470)
scaffold0057 (250-300)||(43842-43892)
[»] scaffold1130 (1 HSPs)
scaffold1130 (157-235)||(2325-2403)
[»] scaffold0004 (2 HSPs)
scaffold0004 (163-298)||(227718-227853)
scaffold0004 (155-237)||(242572-242654)
[»] scaffold0027 (1 HSPs)
scaffold0027 (249-306)||(142343-142400)
[»] scaffold0048 (1 HSPs)
scaffold0048 (149-237)||(59339-59427)


Alignment Details
Target: chr6 (Bit Score: 337; Significance: 0; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 26 - 438
Target Start/End: Original strand, 1240423 - 1240825
Alignment:
Q  26 atcactaacaaattaaaaacacacacaacatttttcactcgaaaatcaatctagtaacaaaaagcttttaaaattaacatggcaatgttgtaacaaacaa 125  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1240423 atcactaacaaattaaaaacacacgcaacatttttcactcgaaaatcaatctagtaacaaaaagcttttaaaattaacatggcaatgttgtaacaaacaa 1240522  T
Q  126 aggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaatt 225  Q
    |||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1240523 agg----------gttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaatc 1240612  T
Q  226 gtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataagaagaagttgatgtcaacaa 325  Q
    ||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1240613 gtatcttcataagttgtttttttcgtaaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataagaagaagttgatgtcaacaa 1240712  T
Q  326 taaacagcaaaagaagttaaatgctataaaatagttgatctaaagaaggaaagattaaacctttaagctaaacttagttacccagtttttgactaagtga 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  1240713 taaacagcaaaagaagttaaatgctataaaatagttgatctaaagaaggaaagatcaaacctttaagctaaacttagttacccagttcttgactaagtga 1240812  T
Q  426 ataatggatagta 438  Q
    |||||||||||||    
T  1240813 ataatggatagta 1240825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 344 - 438
Target Start/End: Complemental strand, 1172213 - 1172119
Alignment:
Q  344 aaatgctataaaatagttgatctaaagaaggaaagattaaacctttaagctaaacttagttacccagtttttgactaagtgaataatggatagta 438  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1172213 aaatgctttaaaatagttgatttcaagaaggaaagattaaacctttaagctaaacttagttacccattttttgactaagtgaataatggatagta 1172119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 152 - 306
Target Start/End: Original strand, 32675818 - 32675971
Alignment:
Q  152 tgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncat 251  Q
    ||||||||||||||||| ||| ||||||  ||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||        |||    
T  32675818 tgagcttatgaaaaataacttatgcaaataaataagtttttatattaattcataagttctcactaatgaaaattgtatcttcataagtt-attttttcat 32675916  T
Q  252 aaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||  |||||   |||||||||||||||| ||||||||||||||||||| |||||    
T  32675917 aaacaaccttacgaagcttatgaataataaataaaagcttatttatttgcataag 32675971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 241
Target Start/End: Complemental strand, 1172545 - 1172410
Alignment:
Q  114 tgtaacaaacaaaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgc------aaagtaataaatttttattttaatacataaa 207  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||      |||  || |||||||||| ||||| ||||||    
T  1172545 tgtaacaaataaaggacccatttggattagcttatttttgagcttatgaaaaatagcttttgcaaaaaaaaaaaaaaaaatttttatgttaattcataaa 1172446  T
Q  208 t--tctcactaatgaaaattgtatcttcataagttg 241  Q
    |  ||||||||||||||||||||| |||| ||||||    
T  1172445 ttctctcactaatgaaaattgtattttcacaagttg 1172410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 10755194 - 10755362
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||||||||||||||| |||||||||| || ||||||  |||||  |||||| ||||| ||||| |||| ||||| |||||||||   |||    
T  10755194 tttggattgacttatttttgagcttctgaaaaatagtttatgcaaataaataagcttttatgttaattcataagttcttactaacgaaaattgt---ttc 10755290  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| |        ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10755291 ataagct-attttttcataagttaccttgacaagcttatgaataatacgtaaaagcttatttatttgcataag 10755362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 306
Target Start/End: Complemental strand, 6776963 - 6776812
Alignment:
Q  154 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataa 253  Q
    ||||||||||||||||||| ||||||  ||||| ||||||| ||||   || | ||||||||||||||| |||||||||||||||||        |||||    
T  6776963 agcttatgaaaaatagcttatgcaaataaataagtttttatattaaagtatcagttctcactaatgaaatttgtatcttcataagtt-atttttccataa 6776865  T
Q  254 attaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    | |||||| ||||||||||| ||| || ||||||||||||||||||| |||||    
T  6776864 actaccttaacaagcttatggatattaaataaaagcttatttatttgcataag 6776812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 151 - 306
Target Start/End: Complemental strand, 23239405 - 23239251
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| |||||||||| |||| ||||||| |||||| |||        |    
T  23239405 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaaggaaagttgtatcgtcataatttgctttttg-a 23239307  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||  || || |||||||||||||||||| ||||||||||||||||||| |||||    
T  23239306 taaaccacgttaacaagcttatgaataataaataaaagcttatttatttgtataag 23239251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 6752970 - 6752885
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcata 236  Q
    |||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  6752970 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataaatcctcactaatgaaaattgtatcttcata 6752885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 130 - 306
Target Start/End: Original strand, 2027084 - 2027258
Alignment:
Q  130 cccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtat 229  Q
    |||| |||| ||| ||||||||| ||||||||||||||||||| ||||||   ||||| |||||| ||||| ||||| |||| |||||  ||| ||||||    
T  2027084 cccagttggattgacttattttt-agcttatgaaaaatagcttatgcaaatagataaacttttatgttaattcataagttcttactaacaaaagttgtat 2027182  T
Q  230 cttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||| ||       |||||| |  |||||||| ||| |||||||| |||||||||||||||||||| |||||    
T  2027183 cttcataagctg-ttttttcataaactgtcttgacaaacttctgaataatgcataaaagcttatttatttgcataag 2027258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 6758788 - 6758631
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataa-atttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 247  Q
    |||| ||||| ||||||||||||| ||||||  |||||  ||||||| ||||| ||||| |||||||||| |||| ||||||||| |||||||           
T  6758788 ttttaagcttctgaaaaatagcttatgcaaataaataagctttttatattaattcataagttctcactaacgaaatttgtatcttgataagtt-aatttt 6758690  T
Q  248 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
     |||||| |||||| ||||||||||| |||||| | ||||||||||||||||| |||||    
T  6758689 tcataaactaccttaacaagcttatggataataaacaaaagcttatttatttgcataag 6758631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 32165187 - 32165275
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  32165187 ttttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctctcactaacgaaaattgtatcttcataa 32165275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 299
Target Start/End: Original strand, 2040109 - 2040261
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn-- 248  Q
    ||||||| |||||||||| ||| ||||||  ||||| ||||||| |||||  |||| |||| |||||||||||||||| ||| |||| |||             
T  2040109 ttgagctcatgaaaaataacttatgcaaataaataagtttttatattaatttataagttctaactaatgaaaattgtaactttataaattgttttttttc 2040208  T
Q  249 --cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
      ||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  2040209 ttcataaattaccttaacaaacttatgaataataaataaaagcttatttattt 2040261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 8014963 - 8014792
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| || |||||| ||| ||||||||||||||||| | |||||| ||||||  |||||| |||||  || | || |||||||  ||||||||||||||    
T  8014963 tttggatttgcttatatttaagcttatgaaaaatagcatatgcaaattaataagcttttatgttaatttatcagttttcactaaccaaaattgtatcttc 8014864  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||| |  |       |||||| ||||||||||||||||||||||||  ||||||||||| ||||||| |||||    
T  8014863 atatgcagtttttt-cataaactaccttgacaagcttatgaataatgaataaaagcttacttatttgcataag 8014792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 9202310 - 9202412
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||  ||  |||||  |||||| ||||| ||||| || |||||||| ||||||||||||||    
T  9202310 tttggattggcttattttttagcttatgaaaaatagcttatgttaataaataagcttttatgttaattcataagttatcactaataaaaattgtatcttc 9202409  T
Q  234 ata 236  Q
    |||    
T  9202410 ata 9202412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 21891270 - 21891420
Alignment:
Q  155 gcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaa 254  Q
    |||||||||||||||||| ||| ||  |||||  |||||| ||||| ||||| ||||  | || ||||||| |||||||||||||||       ||||||    
T  21891270 gcttatgaaaaatagcttatgcgaatgaataagcttttatgttaattcataagttcttgcgaacgaaaattctatcttcataagttgttattt-cataaa 21891368  T
Q  255 ttaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
     ||| ||||||||||||||||||||| || ||| |||||||||||| |||||    
T  21891369 ctacattgacaagcttatgaataatatatcaaaacttatttatttgcataag 21891420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 306
Target Start/End: Original strand, 2034154 - 2034311
Alignment:
Q  148 tttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 247  Q
    |||| |||||||||| ||||||||| ||||||  |||||  |||||| || |  ||||| || | ||| | ||||||||||||||  |||||||          
T  2034154 ttttcgagcttatgataaatagcttatgcaaataaataagcttttatgttgaatcataagttattacttacgaaaattgtatcttggtaagttgtttttt 2034253  T
Q  248 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
     |||||| ||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  2034254 -cataaactaccttgacaaacttataaataatacataaaagcttatttatttgcataag 2034311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 2255895 - 2255738
Alignment:
Q  149 ttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 247  Q
    |||||||||||| ||||| || ||| || |||  |||||  |||||| ||||| ||||  |||||||||   ||||||||||||||||||| ||          
T  2255895 ttttgagcttataaaaaaataacttatgtaaataaataagcttttatgttaattcatatgttctcactaccaaaaattgtatcttcataagctgtttttt 2255796  T
Q  248 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
     ||||||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||    
T  2255795 -cataaattaccttaacaagcttatgaatcatacataaaagctcatttatttgcataag 2255738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 306
Target Start/End: Original strand, 25430710 - 25430845
Alignment:
Q  167 tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaa 266  Q
    |||||| ||||||| |||||| |||||  ||||| ||||| |||||||| |  ||||||||||||||||||| ||       |||||| |||||||||||    
T  25430710 tagcttatgcaaagaaataaacttttaccttaattcataatttctcactgac-aaaattgtatcttcataagctgtttttttcataaactaccttgacaa 25430808  T
Q  267 gcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||   |||||||||| ||||||||||||| |||||    
T  25430809 gcttatg---aatacataaatgcttatttatttgtataag 25430845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 35071339 - 35071443
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||| ||  || |||| ||||||    
T  35071339 tttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcacaaaaaaacattgcatcttc 35071438  T
Q  234 ataag 238  Q
    |||||    
T  35071439 ataag 35071443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 7267957 - 7267779
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaat-------gaaaattg 226  Q
    ||||| ||||||||||||| |||||||||| || | ||| ||||||  |||||  |||||| ||||| | ||| ||||||||  |       ||||||||    
T  7267957 tttggattggcttatttttaagcttatgaataacaacttatgcaaataaataagcttttatgttaattcgtaagttctcacttctcaccagcgaaaattg 7267858  T
Q  227 tatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    || ||||||||||||       |||||| ||||||| |||||||||||||||||||||||||||||||| |||| |||||    
T  7267857 taccttcataagttgtttttt-cataaactaccttggcaagcttatgaataatacataaaagcttatttgtttgcataag 7267779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 21871195 - 21871365
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||||||||| |||||||||||||||| || | ||||  ||||| ||||||| || || ||||||| |||||||| |||||||  ||| ||    
T  21871195 tttggattgacttattttttagcttatgaaaaatagtttatacaaataaataagtttttatgttgattcataaatgctcactaacgaaaattaaatcatc 21871294  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| |        |||||| |||||||||||| |||| ||||||||||||||| ||| ||||||| |||||    
T  21871295 ataagct-actttctcataaactaccttgacaag-ttatcaataatacataaaagtttacttatttgcataag 21871365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 21025252 - 21025309
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  21025252 cataaactaccttaacaagcttatgcataatacataaaagcttatttatttgcataag 21025309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 9201638 - 9201734
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcata 236  Q
    ||||||||||||| |||||||| ||||| |||| ||||||  |||||  |||||| ||||| ||||| |||||||||| | ||||||||| ||||||    
T  9201638 ttggcttattttttagcttatggaaaatcgcttatgcaaataaataagcttttatgttaattcataagttctcactaacggaaattgtattttcata 9201734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 24625912 - 24625861
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||||||||||    
T  24625912 cataaactaccttaacaagcttatgaataatacataaaagcgtatttatttg 24625861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 22708432 - 22708358
Alignment:
Q  163 aaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||| ||||||  ||||| |||||||||||||  ||||| || |||||| |||||||||||||||||||    
T  22708432 aaaatagcttatgcaaataaataagtttttattttaatttataaactcccactaacgaaaattgtatcttcataa 22708358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 3211026 - 3211083
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| ||||||||||||| | ||||||||||||||||||||||||| |||||    
T  3211026 cataaactacattgacaagcttatcagtaatacataaaagcttatttatttgcataag 3211083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 10054442 - 10054385
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| || |||| ||||||||||||||||||||||||||||||||| |||||    
T  10054442 cataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataag 10054385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 306
Target Start/End: Complemental strand, 10687478 - 10687311
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 239  Q
    ||||||||||||| |||||||||||| ||| || ||||||  |||||  |||||| | | | ||||| ||||| |||| ||||||||||||| |||||||    
T  10687478 ttggcttattttttagcttatgaaaa-tagtttatgcaaataaataagcttttatgtcagttcataagttctcgctaacgaaaattgtatctccataagt 10687380  T
Q  240 tgnnnnnnncataaattaccttgacaagcttatgaat---aatacataaaagcttatttatttgaataag 306  Q
    ||       |||||| |||||| | | ||||||||||   ||||||| |||||||||||||||| |||||    
T  10687379 tg-tttttacataaactaccttaataggcttatgaataaaaatacatcaaagcttatttatttgcataag 10687311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 12817117 - 12817174
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| ||||| |||||||||||||||||| |||||||||||||||| |||||    
T  12817117 cataaactacattgactagcttatgaataatacattaaagcttatttatttgcataag 12817174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 30534041 - 30533984
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| || |||| ||||||||||||||||||||||||||||||||| |||||    
T  30534041 cataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataag 30533984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 1189543 - 1189455
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||| ||||||||||||||||| || |||  |||||  ||| ||||||||  ||||| ||||||||| ||||| |||||||||||||    
T  1189543 ttttgaacttatgaaaaatagcttatgtaaataaataagctttaattttaatttataaactctcactaacgaaaagtgtatcttcataa 1189455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 29052492 - 29052337
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||||||||||||||||||||||| || |||  ||||| |||| ||||||||  ||||  |||||| || || ||||||||| ||||||  ||           
T  29052492 ttttgagcttatgaaaaatagcttatgtaaataaataagtttt-attttaatttataagctctcacaaacgagaattgtatcatcataaactgtttttt- 29052395  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||| |||| ||||| ||||||||||||||| |||||| |||| |||||    
T  29052394 cataaaataccttaacaaacttataaataatacataaaagtttatttttttgtataag 29052337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 29623404 - 29623559
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    ||||||| |||||||||||||||| ||||||  |||||  ||| || ||||| ||||| |||||||||| ||||| | ||| |||||||||||           
T  29623404 ttttgagtttatgaaaaatagcttatgcaaataaataagattt-atgttaattcataagttctcactaacgaaaactttattttcataagttg-tttttt 29623501  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| || |||| || || ||||||| ||||||| ||||||||||| |||||    
T  29623502 cataaactacattaacaaactcataaataataaataaaaggttatttatttgcataag 29623559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 34223452 - 34223539
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaa-tgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  |||||||||   ||||||||||||||||||    
T  34223452 ttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctctcactaacaaaaaattgtatcttcataa 34223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 12816822 - 12816908
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaataca-taaattctcactaatgaaaattgtat 229  Q
    |||||||||||||||||||||||||| || ||||||  |||||  |||||| ||||| || ||| |||||||||| |||||| ||||    
T  12816822 cttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcattaagttctcactaacgaaaatggtat 12816908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 32615341 - 32615429
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||| ||| || |||  | |||  ||||||||||||  |||   ||||||||| |||||||||||||||||||    
T  32615341 ttttgagcttatgaaaaataacttatgtaaataagtaagcttttattttaatttatatgctctcactaacgaaaattgtatcttcataa 32615429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 285
Target Start/End: Complemental strand, 6958804 - 6958649
Alignment:
Q  128 gacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgt 227  Q
    ||||| ||||| ||| ||||||||| || ||||||||| |||||| |||| |  |||||  ||||||  ||||  |||| |||||||||| |||||||||    
T  6958804 gacccgtttggattgtcttattttttagtttatgaaaa-tagcttatgcacataaataagcttttatactaatttataacttctcactaaagaaaattgt 6958706  T
Q  228 atcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataa 285  Q
    ||||||| ||| ||       || ||| |||||||| |||||||||||| ||||||||    
T  6958705 atcttcacaagctg-ctttttcacaaactaccttgagaagcttatgaatgatacataa 6958649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 9894827 - 9894776
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| |||||| |||| ||||| ||||||||||||||| |||||||||||    
T  9894827 cataaaataccttaacaaacttataaataatacataaaagattatttatttg 9894776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 9894930 - 9894847
Alignment:
Q  154 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  ||||| ||| ||||||||||  |||||||    
T  9894930 agcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctctcaataacgaaaattgtaaattcataa 9894847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 17300681 - 17300768
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||| ||||||||||||||| || || |||  ||||| |||||||||||||  |||| || ||||||| |||| |||||| |||||||    
T  17300681 tttgggcttatgaaaaatagtttatgtaaataaataactttttattttaatttataagttgtcactaacgaaagttgtatattcataa 17300768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 20776528 - 20776469
Alignment:
Q  135 ttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttat 194  Q
    |||| ||||||||||||||||| ||||||||||| ||| ||||||  |||||| ||||||    
T  20776528 ttggattggcttatttttgagcatatgaaaaataacttatgcaaataaataaacttttat 20776469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 10184258 - 10184344
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||| |  |||  |||||  ||||||||||||  ||||  ||| ||||| ||||||||| |||||||||    
T  10184258 ttgagcttatgaaaaatagcttatataaataaataagcttttattttaatttataagctcttactaacgaaaattgtttcttcataa 10184344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 6632720 - 6632663
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| || ||||| |||| |||||||||||||||| |||||||||| |||||    
T  6632720 cataaactacattaacaagtttataaataatacataaaagcatatttatttgcataag 6632663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 9201768 - 9201813
Alignment:
Q  261 tgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||||||||||||  |||||||||| ||||| |||||    
T  9201768 tgacaagcttatgaataatacagcaaagcttattcatttgcataag 9201813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 1468333 - 1468246
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||| |||||| || |||  ||||| |||||||||||||  ||||  ||| ||||| |||||| || |||||||||    
T  1468333 ttttgagcttatgaaaa-tagcttatgtaaataaataagtttttattttaatttataagctcttactaacgaaaatggtttcttcataa 1468246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 4808731 - 4808643
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || | |  | ||| |||||||||||||  ||||   || ||||| ||| |||||||||||||||    
T  4808731 ttttgagcttatgaaaaatagcttatgtatataagtaagtttttattttaatttataagcccttactaacgaatattgtatcttcataa 4808643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 7446780 - 7446808
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaata 168  Q
    |||||||||||||||||||||||||||||    
T  7446780 ttggcttatttttgagcttatgaaaaata 7446808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 6e-41; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 125 - 300
Target Start/End: Complemental strand, 4068299 - 4068125
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 224  Q
    |||| ||| ||||| ||||||||||||| || ||||||||| |||||| ||||||  |||||| |||||| ||||| ||||| |||||||||| ||||||    
T  4068299 aagggcccgtttggattggcttattttttagtttatgaaaagtagcttatgcaaataaataaacttttatattaattcataagttctcactaacgaaaat 4068200  T
Q  225 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
     ||||||||||||||||       |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4068199 agtatcttcataagttg-ttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttg 4068125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 48819474 - 48819303
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||||||  |||| |||||||||    
T  48819474 tttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacaaaaaatgtatcttc 48819375  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| ||       |||||| |||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  48819374 ataagctg-ttttttcataaactaccttgacaagcttatgaataatacattaaagctcatttatttgcataag 48819303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 134 - 305
Target Start/End: Complemental strand, 37712242 - 37712073
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||||||||||||||| |||||||||||| ||||||  |||||| |||||| ||||| ||||| |||| ||||| |||| ||||||||||    
T  37712242 tttggattgacttatttttgagcttacgaaaaatagcttatgcaaataaataaacttttatgttaattcataagttcttactaacgaaagttgtatcttc 37712143  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||||||       |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  37712142 ataagttg-ttttttcataaactaccttgacaagcttatgaat-atacataaaagcttattcatttgcataa 37712073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 298
Target Start/End: Original strand, 15515258 - 15515421
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||| |||||||||||||||||||||  | |||  |||||  ||| || ||||| ||||| |||||||||| |||||||||||||||    
T  15515258 tttggattggcttatttatgagcttatgaaaaatagcttaagtaaataaataagctttcatgttaattcataagttctcactaacgaaaattgtatcttc 15515357  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 298  Q
    ||||| |        |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15515358 ataagct-cttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatt 15515421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 145 - 300
Target Start/End: Original strand, 16888891 - 16889041
Alignment:
Q  145 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnn 244  Q
    |||||||||||||||||||||||   || ||||||  |||||  |||||| ||||  ||||||||||||||||||||||||||||||||||||| ||       
T  16888891 ttatttttgagcttatgaaaaat---ttatgcaaataaataagcttttatgttaagtcataaattctcactaatgaaaattgtatcttcataagctg-tt 16888986  T
Q  245 nnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
        |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  16888987 ttttcataaactacctt-acaagcttatgaataatacataaaagcttatttatttg 16889041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 37329333 - 37329493
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 243  Q
    ||||||||||||||||||||||||| ||| ||||||  |||||  |||||| |||||  |||| ||||||| || |||||||||||||||||||| ||      
T  37329333 cttatttttgagcttatgaaaaataacttatgcaaataaataagcttttatgttaatttataagttctcaccaacgaaaattgtatcttcataagctg-t 37329431  T
Q  244 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
         |||||| |||||||||||| |||||||||||||||||||||| ||||||||| ||||    
T  37329432 tttttcataaactaccttgacaagtttatgaataatacataaaagctcatttatttgcataa 37329493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 45267637 - 45267469
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||    |||  |||||| || || ||||| |||| ||||| |||||||||||||||    
T  45267637 tttgggttggattatttttgagcttatgaaaaatagcttatgcaaa----taagcttttatgtttattcataagttcttactaacgaaaattgtatcttc 45267542  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| ||       |||||| |||||||||||||| || ||||||||  ||||||||||||||||| |||||    
T  45267541 ataagctgtttttttcataaactaccttgacaagctaataaataatactaaaaagcttatttatttgcataag 45267469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 149 - 300
Target Start/End: Complemental strand, 13039107 - 13038957
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||||| ||||||||||||||||| ||||||  |||||| |||||| ||||| ||||| |||||||||| ||||| | |||||||||||||||           
T  13039107 ttttgaacttatgaaaaatagcttatgcaaataaataaacttttatattaattcataacttctcactaacgaaaactttatcttcataagttg-tttttt 13039009  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| |||||| ||||||| |||||||||| |||||||||||||||||||    
T  13039008 cataaactaccttaacaagctcatgaataatatataaaagcttatttatttg 13038957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 134 - 293
Target Start/End: Complemental strand, 28690179 - 28690021
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||| ||||||||||||||||||||||||| ||||||  |||||  |||||| ||||| || || ||||||||||| ||||||||||||||    
T  28690179 tttggattgacttgtttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcagaatttctcactaataaaaattgtatcttc 28690080  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttat 293  Q
    ||||| ||       |||||| ||||||||||| |||||||||||||||||||| |||||    
T  28690079 ataagctg-tttgttcataaactaccttgacaaacttatgaataatacataaaaccttat 28690021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 300
Target Start/End: Complemental strand, 26988323 - 26988158
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||||||||||||||||||||||||| || ||||||  ||| |  |||||| ||||| ||||| || | ||||| || ||||||||||||    
T  26988323 tttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaattagcttttatgttaattcataagtttttactaacgacaattgtatcttc 26988224  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||| ||       |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  26988223 ataagctgtttttt-cataaactaccttgacaagcttatgaataagacataaaagcttatttatttg 26988158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 295
Target Start/End: Original strand, 41196612 - 41196781
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 224  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||  |||||   ||||| ||||| || ||  |||||||||  |||||    
T  41196612 aagggcccatttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaataagcctttatgttaattcacaagctctcactaacaaaaat 41196711  T
Q  225 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttattt 295  Q
    |||||||||||||| ||       |||||| ||| |||||||||||||||||||||||||||| |||||||    
T  41196712 tgtatcttcataagctg-ttttttcataaactacattgacaagcttatgaataatacataaaaacttattt 41196781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 164 - 299
Target Start/End: Original strand, 6337697 - 6337831
Alignment:
Q  164 aaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttga 263  Q
    ||||||||| ||||||  |||||  |||||| ||||| ||||| ||||| ||||  ||||||||||||||||||| ||       |||||| ||||||||    
T  6337697 aaatagcttatgcaaacaaataagcttttatgttaattcataagttctcgctaacaaaaattgtatcttcataagctgtttttt-cataaactaccttga 6337795  T
Q  264 caagcttatgaataatacataaaagcttatttattt 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  6337796 caagcttatgaataatacataaaagcttatttattt 6337831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 35897530 - 35897705
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||||||||||| ||||||||||||||||| || |||  |||||| |||||| |||||  ||||||| |||||||||||||||||||| |     
T  35897530 tttggattgacttatttttgaacttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataaattttcactaatgaaaattgtatcgtt 35897629  T
Q  234 ataag---ttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||   ||        |||||| ||| |||| |||||||||||||||| |||||| |||||||||||| |||||    
T  35897630 ataagtttttttttccttcataaactactttgaaaagcttatgaataataaataaaaacttatttatttgcataag 35897705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 3069820 - 3069936
Alignment:
Q  189 ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaag 288  Q
    |||||| ||||| ||||| ||||||||| ||||||||||||||||||||| ||       |||||| |||||||||||||||||||||||||||| ||||    
T  3069820 ttttatgttaattcataagttctcactagtgaaaattgtatcttcataagctgtttttt-cataaactaccttgacaagcttatgaataatacattaaag 3069918  T
Q  289 cttatttatttgaataag 306  Q
    |||| ||||||| |||||    
T  3069919 cttacttatttgtataag 3069936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 151 - 305
Target Start/End: Original strand, 46689478 - 46689631
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||||| ||| ||||||  |||||| | |||| ||||| ||||| |||||||||| ||||||| ||| |||||||||||        |    
T  46689478 ttgagcttatgaaaaataacttatgcaaataaataaactattatattaattcataagttctcactaacgaaaattttattttcataagttgttttatt-a 46689576  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||| |||||| ||||||| |||||||||| |||||||||| |||||||| ||||    
T  46689577 taaaataccttaacaagctcatgaataataaataaaagcttttttatttgcataa 46689631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 31249834 - 31249754
Alignment:
Q  157 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||| ||||||||||  |||||| |||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  31249834 ttatgaaaaataacttttgcaaataaataaacttttatattaattcatagattctcactaatgaaaattgtatcttcataa 31249754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 299
Target Start/End: Complemental strand, 41130169 - 41130005
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||||||||| |||||||||||||||| ||| | | ||  |||||  |||||| ||||| | ||| ||  ||||||||||||||||||||||    
T  41130169 tttggattggcttattttcgagcttatgaaaaataacttattctaataaataagattttatgttaattcttaagtttgcactaatgaaaattgtatcttc 41130070  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    ||||||||       ||||||  |||| || ||||||||||||||||||||||| ||| |||||||    
T  41130069 ataagttg-ttttgacataaaccacctagagaagcttatgaataatacataaaaacttttttattt 41130005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 299
Target Start/End: Original strand, 1565286 - 1565457
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaa-------ttctcactaatgaaaattg 226  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||  |||||  |||||| ||| | ||||||       | |||||||  ||||||||    
T  1565286 tttggattggcttatttttgagcttatgaaaaatagc-tttgcaaataaataagcttttatgttatttcataaatcataagtactcactagcgaaaattg 1565384  T
Q  227 tatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||||||| |||        |||||| |||||||||||||||| ||||||| ||||||||||| |||||||    
T  1565385 tatcttcatatgttatttttttcataaactaccttgacaagcttacgaataatgcataaaagcttgtttattt 1565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 306
Target Start/End: Complemental strand, 35590296 - 35590134
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttatt-ttaatacataaattctcactaatgaaaattgtatcttcataagttgn 242  Q
    ||||||||| ||||||  ||||||||||| | ||||  || || |||||| | ||||| ||||| |||||||| | |||||||||||||||||||| ||     
T  35590296 cttatttttaagcttagaaaaaatagcttatccaaataaaaaagtttttaatgttaattcataagttctcactgacgaaaattgtatcttcataagctgt 35590197  T
Q  243 nnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
          ||||||  |||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  35590196 ttttt-cataaacaaccttgacaagcttatgaactatacataaaagcttatttatttgcataag 35590134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 306
Target Start/End: Original strand, 36422909 - 36423063
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||| |||||||| |||| ||| ||||||  |||||| |||||| ||| |  |||| |||||||||| |||| || |||||||||||||||       ||    
T  36422909 ttgatcttatgaagaataacttatgcaaataaataaacttttatattattttataacttctcactaacgaaatttttatcttcataagttgtttatt-ca 36423007  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||| |||||| |||| ||||||||||||| ||||||||||||||||||| |||||    
T  36423008 taaactaccttaacaaacttatgaataataaataaaagcttatttatttgcataag 36423063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 151 - 300
Target Start/End: Original strand, 9572712 - 9572861
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||||||  |||| | ||||||||||| |||       ||    
T  9572712 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaacaaaaactttatcttcataaattg-ttttttca 9572810  T
Q  251 taaattaccttgacaagcttatgaataatacat-aaaagcttatttatttg 300  Q
    |||| |||||| |||| ||||||||||||| || |||||||||||||||||    
T  9572811 taaactaccttaacaaacttatgaataataaataaaaagcttatttatttg 9572861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 10082426 - 10082254
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    |||||||||  ||||||||||||||||||| ||||  ||   ||||  |||||  |||||| ||||| ||||| ||||||| ||  |||| ||||| |||    
T  10082426 tttgggttgagttatttttgagcttatgaacaatacattacacaaataaataagcttttatattaattcataagttctcacgaaccaaaaatgtattttc 10082327  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||       |||||| ||||||||||| ||||| ||||| |||||||| |||||||||||| |||||    
T  10082326 ataagttgtttttttcataaactaccttgacaaacttatcaataacacataaaaacttatttatttgcataag 10082254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 306
Target Start/End: Original strand, 32497199 - 32497353
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnc 249  Q
    ||||||||||||||||||||||| || |||  |||||| ||||||||||||  ||||  ||||||||| |||||||||||| ||||||  ||       |    
T  32497199 tttgagcttatgaaaaatagcttatgtaaataaataaacttttattttaatttataagctctcactaacgaaaattgtatcctcataaactg-ttttttc 32497297  T
Q  250 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| |||||| | || ||||| |||||||||||||| |||||||||||| |||||    
T  32497298 ataaactacctt-aaaaacttataaataatacataaaaacttatttatttgcataag 32497353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 299
Target Start/End: Original strand, 26946015 - 26946180
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||||||||||||||||||||||  ||||| || |||  || ||  |||| |  |||| || || || ||||||| |||||||||||||||    
T  26946015 tttggattgacttatttttgagcttatgaaaatcagcttatgtaaataaacaagcttttgtactaattcacaagttgtcactaaggaaaattgtatcttc 26946114  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacat-aaaagcttatttattt 299  Q
    ||||||||       |||||| |||||| |||||||||||||||| |||| ||||||||||||||||    
T  26946115 ataagttgtttttt-cataaactaccttaacaagcttatgaataacacataaaaagcttatttattt 26946180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 28870378 - 28870274
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||||| |||| ||||||||||||||| ||||||||||  |||||  |||||| || || ||||| |||||||||| |||||||| || |||    
T  28870378 tttggattggcttaatttttagcttatgaaaaataacttttgcaaataaataagcttttatgttcattcataagttctcactaaagaaaattgcattttc 28870279  T
Q  234 ataag 238  Q
    |||||    
T  28870278 ataag 28870274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 141 - 306
Target Start/End: Complemental strand, 1005508 - 1005344
Alignment:
Q  141 tggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 240  Q
    |||| |||||||  ||||||||||||||||||   ||||  ||| |  ||| || ||||| ||||| |||||||||   ||||||||||||||||||||     
T  1005508 tggcatatttttctgcttatgaaaaatagcttactcaaataaatgagctttgatgttaattcataagttctcactatcaaaaattgtatcttcataagta 1005409  T
Q  241 gnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |       ||| || ||||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  1005408 gtttttt-cattaactacctagacaagcttatgaataatacgtaaaagcttatttatttgcataag 1005344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 10365335 - 10365176
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 243  Q
    ||||||||| ||||||||||||||||||| ||||||  |||||  |||||| |||||  | || || | ||||| ||||||||||| |||||  ||||      
T  10365335 cttatttttaagcttatgaaaaatagcttatgcaaatgaataagcttttatgttaatttaaaagtttttactaacgaaaattgtatattcatcggttgtt 10365236  T
Q  244 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
         |||||| ||| ||||||||||||| ||||||||||||||| ||||| ||||| ||||    
T  10365235 ttt--cataaactactttgacaagcttattaataatacataaaagtttattcatttgcataa 10365176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 26435082 - 26435189
Alignment:
Q  130 cccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtat 229  Q
    ||||||||| ||| ||||||||| |||||||||||||||| || ||||||  |||| | || ||| ||||| ||||| |||||| ||| ||||| |||||    
T  26435082 cccatttggattgacttatttttaagcttatgaaaaatagtttatgcaaataaatagacttatatgttaattcataagttctcagtaacgaaaaatgtat 26435181  T
Q  230 cttcataa 237  Q
    ||||||||    
T  26435182 cttcataa 26435189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 134 - 298
Target Start/End: Complemental strand, 47413547 - 47413385
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||  |||||  |||||| |||||  |||| || |||| ||   ||||| |||||||    
T  47413547 tttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaatttataatttttcaccaacacaaattatatcttc 47413448  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 298  Q
    ||||  ||       |||||| ||| ||||||||||||| ||||||||| ||||||| |||||||    
T  47413447 ataacctg-ttatttcataaactacattgacaagcttataaataataca-aaaagctcatttatt 47413385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 18327585 - 18327528
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| || |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  18327585 cataaactatcttgacaagcttatgagtaatacataaaagcttatttatttgcataag 18327528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 8061943 - 8062023
Alignment:
Q  157 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||| || || |||  |||||||||||||||||||  ||||  |||||| ||||||||||||||||||||||    
T  8061943 ttatgaaaaataggttatgtaaataaataaatttttattttaatttataagctctcacaaatgaaaattgtatcttcataa 8062023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 8410293 - 8410205
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  | ||  ||||||||| |||||||||||||||||||    
T  8410293 ttttgagcttatgaaaaatagcttctgtaaataaataagcttttattttaatttacaagctctcactaacgaaaattgtatcttcataa 8410205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 17814350 - 17814262
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| |||| ||||| ||||||||||| |||||||    
T  17814350 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgactaacgaaaattgtattttcataa 17814262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 10850096 - 10850147
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  10850096 cataaactacgttgacaaccttatgaataatacataaaagcttatttatttg 10850147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 17628352 - 17628439
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||||| || |||  |||||  ||||||||||||  | ||  ||||||||| |||||||||||||||||||    
T  17628352 tttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttagaagctctcactaacgaaaattgtatcttcataa 17628439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 140 - 233
Target Start/End: Complemental strand, 391345 - 391251
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaa-tttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    |||||||| |||| ||||||||||||||||||| | ||||  |||||  ||||||| ||||| ||||| ||||| |||| |||||||||||||||    
T  391345 ttggcttaatttttagcttatgaaaaatagcttatccaaataaataagctttttatgttaattcataagttctcgctaacgaaaattgtatcttc 391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 42591540 - 42591454
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  | ||||||| ||||| |||||||||||||    
T  42591540 ttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctttcactaacgaaaagtgtatcttcataa 42591454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 15791542 - 15791457
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    ||||||||||||||||||||||| || |||  |||||  ||||||||||||  ||||  ||||| ||| |||||||||||||||||    
T  15791542 tttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataagctctcattaacgaaaattgtatcttcat 15791457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 31378776 - 31378833
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||||||||||| |||||    
T  31378776 cataaactaccttgacaagcttgttaataatatataaaagcttatttatttgcataag 31378833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 14460967 - 14461055
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||| |||| ||||||| ||  |||||  || |||||||||| |||||  |||| ||||||||||||||||||||||||| ||||    
T  14460967 ttttgagcctatgcaaaatagtttacgcaaataaacaaatttttatgttaatttataagttctcactaatgaaaattgtatctttataa 14461055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 15235087 - 15235175
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  ||| ||||| |||||| || |||||||||    
T  15235087 ttttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctcttactaacgaaaatggtttcttcataa 15235175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 16708958 - 16708871
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||| |  || ||||||  ||||||||||||| ||||| |||||  ||| ||||||||||||||||| |||||||    
T  16708958 ttttgagcttatgaaaaagat-ttatgcaaataaataaatttttatgttaattcataagatcttactaatgaaaattgtatattcataa 16708871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 25485908 - 25485820
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||| ||||||| ||| ||||| ||||||  ||||||||||||| |||||  ||||||| ||||||  ||||||| |||||||||||    
T  25485908 ttttgaacttatgagaaagagcttatgcaaataaataaatttttatattaatttataaattttcactagcgaaaattttatcttcataa 25485820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 35282539 - 35282676
Alignment:
Q  168 agcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaag 267  Q
    ||||| ||||||  |||| | |||||| ||||| ||||| || |||||||| |||||| |||||||||||||||       |||||| |||||| ||| |    
T  35282539 agcttatgcaaataaatagacttttatattaattcataagttttcactaattaaaattttatcttcataagttg-ttttttcataaactaccttaacatg 35282637  T
Q  268 cttatgaataatacataaaagcttatttatttgaataag 306  Q
     |||| ||||||| ||||| ||||||||||||| |||||    
T  35282638 tttataaataataaataaacgcttatttatttgcataag 35282676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 42367125 - 42367026
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| || |||||||||| ||||||||||||||||||| ||||||  ||||| || |||| ||||| ||| |||||| | |||  ||||||||||||||    
T  42367125 tttggatttgcttatttttaagcttatgaaaaatagcttatgcaaataaataagttcttatgttaattcat-aattcttattaacaaaaattgtatcttc 42367027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 5347313 - 5347226
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| |||| | ||| ||||||||||| |||||||    
T  5347313 tttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgattaacgaaaattgtattttcataa 5347226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 12256733 - 12256678
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||| ||||| |||| ||||| |||||||||| ||||||||    
T  12256733 aataaatttttattttaattcataagttcttactaacgaaaattgtaccttcataa 12256678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 19285025 - 19284970
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||  |||| || ||||||| |||||||||||||||||||    
T  19285025 aataaatttttattttaatctataatttttcactaacgaaaattgtatcttcataa 19284970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 19395932 - 19395846
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||| |  | |  ||||| |||||||||||||  ||||  | ||||||| |||||||||||||||||||    
T  19395932 ttgagcttatgaaaaatagcttatatatataaataagtttttattttaatttataagctttcactaacgaaaattgtatcttcataa 19395846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 26936919 - 26936863
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||||||||||||||||||| | ||||||| ||||||||||||||| |||||    
T  26936919 cataaactaccttgacaagcttatgagt-atacatagaagcttatttatttgcataag 26936863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 17349038 - 17348950
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||| ||||||||||||||||| || |||  ||||| |||||||||||||  ||||| ||||| ||  |||||| |||| |||||||    
T  17349038 ttttgaacttatgaaaaatagcttatgtaaataaataagtttttattttaatttataaactctcagtagagaaaatcgtattttcataa 17348950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 19220333 - 19220245
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||| || ||||||  |||||  ||||||||||||  ||||  ||||| ||  |||||||| ||||||||||    
T  19220333 ttttgagcttatgaaaaatagtttatgcaaataaataagcttttattttaatttataatctctcattatcgaaaattgcatcttcataa 19220245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 39941420 - 39941380
Alignment:
Q  260 ttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  39941420 ttgacaagcttatgaataatacataaaaactcatttatttg 39941380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 39941491 - 39941451
Alignment:
Q  260 ttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  39941491 ttgacaagcttatgaataatacataaaagttcatttatttg 39941451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 299
Target Start/End: Complemental strand, 46473254 - 46473105
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    ||||||||||| | ||||||| || ||||||  |||||  |||||| ||||| ||||| |||| | ||| ||||| | |||||||||||||||           
T  46473254 ttttgagcttacggaaaataggttatgcaaataaataagattttatattaattcataagttcttattaacgaaaactttatcttcataagttg-tttttt 46473156  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||| | |||||| | || || |||||||||| ||||||||||||||||||    
T  46473155 catatactaccttaaaaacctcatgaataataaataaaagcttatttattt 46473105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 391219 - 391172
Alignment:
Q  260 ttgacaagcttatgaataatacat-aaaagcttatttatttgaataag 306  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||    
T  391219 ttgacaagcttatgaataatatataaaaagcttatttatttgcataag 391172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 3115989 - 3116076
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||| ||| || |||  | |||  ||||||||||||  ||||  ||| ||||| |||||||||||||||||||    
T  3115989 tttgagcttatgaaaaataacttatgtaaataagtaagcttttattttaatttataagatcttactaacgaaaattgtatcttcataa 3116076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 22593446 - 22593489
Alignment:
Q  263 acaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||||||||||||||  ||||||||||| |||||    
T  22593446 acaagcttatgaataatacataaaaatttatttatttgcataag 22593489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 306
Target Start/End: Complemental strand, 41003514 - 41003391
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattacctt-gacaagcttatgaataata 280  Q
    |||||| |||||| |||||  |||| ||||||||||| |||||| ||||||  |||| ||       |||||| |||||| ||||| ||||| |||||||    
T  41003514 aataaacttttatgttaattaataagttctcactaataaaaattatatcttagtaagctgttttt--cataaactacctttgacaaacttataaataata 41003417  T
Q  281 cataaaagcttatttatttgaataag 306  Q
    ||||||| |||||||||||| |||||    
T  41003416 cataaaaacttatttatttgcataag 41003391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 20169306 - 20169268
Alignment:
Q  268 cttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  20169306 cttataaataatacataaaagcttatttatttgcataag 20169268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 41576323 - 41576409
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||  ||||| || ||||||  |||||| |||||| |||||| |||| || |||||||  |||||| |||||||||||    
T  41576323 ttgagcttatgatgaatagattatgcaaataaataaacttttatgttaatatataagttatcactaacaaaaattatatcttcataa 41576409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 49822863 - 49822817
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgta 228  Q
    ||||| ||||||||||||| |||||||| ||||||| ||||||||||    
T  49822863 aataagtttttattttaattcataaattttcactaacgaaaattgta 49822817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 1265718 - 1265775
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||||||||  ||||||||||||||||||| ||||| | |||| |||||    
T  1265718 cataaactaccttgacaaaattatgaataatacataaaatcttatctgtttgtataag 1265775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 9575492 - 9575407
Alignment:
Q  145 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 230  Q
    |||||||| | |||||||||||||| || | ||||  |||||||| |||| |||||  |||||||||| |||| ||||||| ||||    
T  9575492 ttatttttaaacttatgaaaaatagtttatacaaataaataaattattatgttaatttataaattctctctaacgaaaattatatc 9575407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 15631965 - 15631908
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| || |||| ||||| |||||||||||||| |||||||||||| |||||    
T  15631965 cataaaatacattaacaaacttataaataatacataaaaacttatttatttgtataag 15631908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 22103262 - 22103181
Alignment:
Q  156 cttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||| || |||  || ||  ||||||||||||  |||| |||| ||||| ||||||||||| |||||||    
T  22103262 cttatgaaaaatagcttatgtaaataaagaagcttttattttaatctataagttctaactaacgaaaattgtattttcataa 22103181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 23544852 - 23544819
Alignment:
Q  249 cataaattaccttgacaagcttatgaataataca 282  Q
    |||||| |||||||||||||||||||||||||||    
T  23544852 cataaactaccttgacaagcttatgaataataca 23544819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 51409732 - 51409789
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| || |||| ||||||||||||||||| || |||||||||||| |||||    
T  51409732 cataaactacatttacaaacttatgaataatacatacaaacttatttatttgcataag 51409789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 300
Target Start/End: Complemental strand, 8410191 - 8410159
Alignment:
Q  268 cttatgaataatacataaaagcttatttatttg 300  Q
    |||||||||||||||||||| ||||||||||||    
T  8410191 cttatgaataatacataaaaacttatttatttg 8410159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 22593337 - 22593421
Alignment:
Q  153 gagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||| |||| ||||| ||||||  |||||  |||||| |||||  |||| ||||||||||  ||||||||||||| ||||    
T  22593337 gagcttatgcaaaacagcttatgcaaataaataagcttttatgttaatttataagttctcactaacaaaaattgtatctttataa 22593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 39941560 - 39941520
Alignment:
Q  260 ttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||||||||||||||||||||||||||  | |||||||||    
T  39941560 ttgacaagcttatgaataatacataaaaattcatttatttg 39941520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 4e-36; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 131 - 306
Target Start/End: Original strand, 48591332 - 48591506
Alignment:
Q  131 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 230  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||  |||||  |||||  ||||| ||||| |||||| ||| ||||||||||||    
T  48591332 ccatttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttctcattaacgaaaattgtatc 48591431  T
Q  231 ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||| ||       |||||| ||||||||||||| ||||||||||| |||||| |||||||||||| |||||    
T  48591432 ttcataagctg-ttttttcataaactaccttgacaagcgtatgaataatatataaaaacttatttatttgcataag 48591506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 287
Target Start/End: Complemental strand, 17223004 - 17222852
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||| ||||| ||||| |||| ||||| |||||||||||||||    
T  17223004 tttggattggcttatttttgagcttatgaaaaatagcttattcaaataaataagtttttatgttaattcataagttctaactaacgaaaattgtatcttc 17222905  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaa 287  Q
    ||||  ||       |||||| ||||||||||||||||||||||||||||||||    
T  17222904 ataatctg-ttttttcataaactaccttgacaagcttatgaataatacataaaa 17222852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 23297599 - 23297442
Alignment:
Q  145 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnn 244  Q
    |||||||||||||||||||||||||||| ||||||  |||||  ||||||  |||| ||||| ||||| ||||  ||||||||||||||||||| ||       
T  23297599 ttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgctaattcataagttctcgctaacaaaaattgtatcttcataagctgttt 23297500  T
Q  245 nnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
        |||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  23297499 ----cataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataag 23297442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 12495555 - 12495728
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||||||||||||||||||||| |||||| ||||||  ||||| ||||||| |||||  |||| |||||||||||||| ||||||||||     
T  12495555 tttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttg 12495654  T
Q  234 ataagttgnnnnnnncataaattacc--ttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    || || ||       |||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12495655 attagctg-ttttttcataaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcataag 12495728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 28074548 - 28074369
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 224  Q
    |||| ||| ||||| ||||||||||||| || |||||||||||||||| ||||||  |||||  |||||| ||| | || || || || |||| ||||||    
T  28074548 aagggcccctttggattggcttattttttagtttatgaaaaatagcttatgcaaataaataagattttatgttatttcacaagttttcgctaacgaaaat 28074449  T
Q  225 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||| |        |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28074448 tgtatcttcataagct--ttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 28074369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 36741079 - 36740908
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||  |||||  |||| | || || ||||| ||||||||||||||||||||||||||    
T  36741079 tttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttgtgttgattcataagttctcactaatgaaaattgtatcttc 36740980  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    || |  ||       |||||| ||| |||||||||||||| |||||| ||||||||||||||||||| |||||    
T  36740979 atgaactg-tattttcataaactactttgacaagcttatgcataatatataaaagcttatttatttgcataag 36740908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 125 - 305
Target Start/End: Complemental strand, 29877825 - 29877644
Alignment:
Q  125 aaggacccatttgggttggctta--tttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaa 222  Q
    |||| ||||||||| ||||||||  ||||| | ||||||||||||||||| ||||||   ||||  |||||| ||||| ||||| ||||||||||  |||    
T  29877825 aagggcccatttggattggcttactttttttatcttatgaaaaatagcttatgcaaatatataagcttttatgttaattcataagttctcactaacaaaa 29877726  T
Q  223 attgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||||||||||||| ||       |||||| ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  29877725 attgtatcttcataagctg-ctttttcataaactaccttagcaagcttatgaataatacataaaagcttatttatttgcataa 29877644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 127 - 306
Target Start/End: Original strand, 38345727 - 38345903
Alignment:
Q  127 ggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattg 226  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||| || |||  |||||  |||||| ||||| ||||| ||||  ||||| |||||||    
T  38345727 ggacccgtttggattggcttatttttgagcttat-aaaaatagcttatgtaaataaataagcttttatgttaattcataagttctggctaataaaaattg 38345825  T
Q  227 tatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||||       |||||| ||| ||||||| |||||||||| |||||||||||||||||||||| |||||    
T  38345826 tatcttcataagttg-ttttttcataaactactttgacaa-cttatgaatactacataaaagcttatttatttggataag 38345903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 296
Target Start/End: Complemental strand, 41229061 - 41228917
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||||||||| ||||||  ||| |  |||||| ||||| ||||| |||| ||||||||||||||||||||||| |||||       ||    
T  41229061 ttgagcttatgaaaaatagcttatgcaaataaattagcttttatattaattcataagttctaactaatgaaaattgtatcttcatcagttg-ttttttca 41228963  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttattta 296  Q
    |||| |||||| |||||||||||||||||| |||||||| ||||||    
T  41228962 taaactaccttaacaagcttatgaataataaataaaagcctattta 41228917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 7148946 - 7148776
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||||||| |||||||||||||| |||||| ||||||  |||||  ||||||  |||| ||||| |||| ||||| ||||||||||| ||     
T  7148946 tttggattgacttatttctgagcttatgaaaa-tagcttatgcaaataaataagcttttatgctaattcataagttctgactaaagaaaattgtattttt 7148848  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| ||       || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7148847 ataagctgtttttt-caaaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 7148776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 23335817 - 23335646
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||||||||| ||||||||| ||||||||  |||||   || || ||||||| ||||| ||||| |||||||| |||||||||||||||||    
T  23335817 tttggattgccttattttttagcttatgagaaatagctaatgcaattaaacaagtttttatgttaattcataagttctcacttatgaaaattgtatcttc 23335718  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| ||       |||||| |||||||| | ||||||||||||||||||||| || ||||||||| |||||    
T  23335717 ataagctg-ttttttcataaactaccttgatatgcttatgaataatacataaaatctcatttatttgcataag 23335646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 46704201 - 46704340
Alignment:
Q  154 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataa 253  Q
    ||||||||||||||| ||| ||||||  | ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||| ||       |||||    
T  46704201 agcttatgaaaaataacttatgcaaataagtaactttttatattaattcataagttctcactaatgaaaattttatcttcataagctg-ttttttcataa 46704299  T
Q  254 attaccttgacaagcttatgaataatacataaaagcttatt 294  Q
    | |||||| ||||||| |||||||||| |||||||||||||    
T  46704300 actaccttaacaagctcatgaataataaataaaagcttatt 46704340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 488295 - 488466
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||| |||| ||||||| ||||||||||| || |||  |||||  |||||| ||||| ||||| ||||||||||| |||||||||||||     
T  488295 tttggattgacttacttttaagcttataaaaaatagcttatggaaataaataagcttttatgttaattcataagttctcactaataaaaattgtatcttt 488394  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    | |||          |||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  488395 acaagca-attttttcataaactaccttgacaagcttattaataatacataaaagcttacttatttgcataag 488466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 299
Target Start/End: Complemental strand, 948250 - 948083
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattt--taatacataaattctcactaatgaaaattgtatct 231  Q
    ||||| ||| |||||||||||||||||||| | |||||| ||||||  |||||  |||||| |  |||| ||||| ||||| || |  ||||||||||||    
T  948250 tttggattgacttatttttgagcttatgaagagtagcttatgcaaatgaataagcttttatgtgttaattcataagttctctctgacaaaaattgtatct 948151  T
Q  232 tcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    | ||||| ||       |||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  948150 ttataagctgtttttttcataaactaccttgacaaagttatgaataatacataaaagcttatttattt 948083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 48687108 - 48687006
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||||||||||||||||||||| |||||| ||||||  |||||| || ||| ||||| ||||| |||||||||||||||||||||||||     
T  48687108 tttggattgccttatttttgagcttatgaaaa-tagcttatgcaaataaataaacttatatgttaattcataagttctcactaatgaaaattgtatcttt 48687010  T
Q  234 ataa 237  Q
    ||||    
T  48687009 ataa 48687006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 142 - 306
Target Start/End: Complemental strand, 897137 - 896974
Alignment:
Q  142 ggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    ||||||||||| | |||||||||||||| || ||||||  |||||  |||||| |||||  |||| || ||||||| |||||| |||||| | ||| |||    
T  897137 ggcttattttttaacttatgaaaaatagtttatgcaaataaataagcttttatattaatttataagttttcactaacgaaaatcgtatctacgtaaattg 897038  T
Q  242 nnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
           |||||| ||| ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  897037 tttttt-cataaactacattgacaagcttatgaataatacataaaagtttatttatttgcataag 896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 131 - 295
Target Start/End: Complemental strand, 32628956 - 32628793
Alignment:
Q  131 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 230  Q
    |||||||| ||||||||||||||| ||||||||||||||||| || |||   |   | |||||| ||||| | ||| |||||||| || |||||||||||    
T  32628956 ccatttggattggcttatttttgaccttatgaaaaatagcttatgtaaatatacctacttttatgttaattcgtaagttctcactgatcaaaattgtatc 32628857  T
Q  231 ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttattt 295  Q
    |||| ||| ||       |||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  32628856 ttcacaagctgtttttt-cataaattacctcgacaagcttatgaataacacaaaaaagcttattt 32628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 42611779 - 42611950
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttt-tgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| ||||| ||||||| |||||||||||||||| ||| ||||||  |||||  |||||| ||||| ||||| || ||||| | ||||| ||||||||    
T  42611779 tttggattggcgtatttttaagcttatgaaaaatagatttatgcaaataaataagcttttatgttaattcataagttgtcact-acgaaaactgtatctt 42611877  T
Q  233 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacata-aaagcttatttatttgaataag 306  Q
    |||||||||       |||||| || || ||||||||||||||||||||||| |||||||||||||||| |||||    
T  42611878 cataagttg-ttttttcataaacta-ctcgacaagcttatgaataatacatataaagcttatttatttgcataag 42611950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 305
Target Start/End: Original strand, 18424211 - 18424358
Alignment:
Q  156 cttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaat 255  Q
    ||||||||||||||||  || |||  |||||  |||||| ||||| ||||| || ||| |||  |||||||||||||||||| |||       ||||||     
T  18424211 cttatgaaaaatagctcatgaaaataaataagcttttatgttaattcataagttttcaataacaaaaattgtatcttcataaattgttttt--cataaac 18424308  T
Q  256 taccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  18424309 taccttcacaagtttatgaataatacataaaagcttatttatttgtataa 18424358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 18630821 - 18630961
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| |||||||||| ||||| | |||||||||||| ||           
T  18630821 ttttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaacgaaaactttatcttcataagctg-tttttt 18630919  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagct 290  Q
    |||||| |||||| ||||||| ||| |||||| |||||||||    
T  18630920 cataaactaccttaacaagctcatggataataaataaaagct 18630961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 36254948 - 36255051
Alignment:
Q  135 ttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttca 234  Q
    |||| ||| |||||||||  |||||||||||||||||| |||| |  |||||  |||||| ||||| ||||| ||||||||||| |||||||||||||||    
T  36254948 ttggattgacttatttttttgcttatgaaaaatagcttatgcagataaataagcttttatgttaattcataagttctcactaattaaaattgtatcttca 36255047  T
Q  235 taag 238  Q
    ||||    
T  36255048 taag 36255051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 2330394 - 2330491
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    ||||||||||||||||||||||| | | | |||| |  |||||| |||||||||| | ||||| ||||||| ||||||||||||||||||||| ||||    
T  2330394 cttatttttgagcttatgaaaaacaacctatgcagataaataaacttttattttatttcataagttctcacaaatgaaaattgtatcttcatacgttg 2330491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 22273967 - 22273851
Alignment:
Q  123 caaaggacccatttgggttggcttatttttg-agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaa 221  Q
    |||||| ||| ||||| || ||||||||||  |||||| ||||||||| || ||||||  |||||| |||||| ||||| ||||| ||||||||||  ||    
T  22273967 caaagggcccgtttggattagcttatttttttagcttacgaaaaatagattatgcaaataaataaacttttatgttaattcataacttctcactaacaaa 22273868  T
Q  222 aattgtatcttcataag 238  Q
    |||||||||||||||||    
T  22273867 aattgtatcttcataag 22273851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 34526258 - 34526351
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||| ||| ||||||||||||||||| || ||||||  |||||  |||||| ||||| ||||| |||||||||  |||||||||||||||||||    
T  34526258 cttactttcgagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcataagttctcactatggaaaattgtatcttcataa 34526351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 43699508 - 43699565
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  43699508 cataaactacattgacaagcttatgaataagacataaaagcttatttatttgtataag 43699565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 4603258 - 4603346
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||  || || |||  |||||  ||||||||||||  ||||| ||||||||| |||||||||||||||||||    
T  4603258 ttttgagcttatgaaaaatattttatgtaaataaataagcttttattttaatttataaactctcactaacgaaaattgtatcttcataa 4603346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 9153508 - 9153588
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtat 229  Q
    ||||||||| || ||||||||||| ||||||  |||||| |||||| |||||  ||||||||||||| |||||||||||||    
T  9153508 ttttgagctaattaaaaatagcttatgcaaataaataaacttttatgttaatttataaattctcactgatgaaaattgtat 9153588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 15179977 - 15179889
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| |||| ||||| ||||||||||| |||||||    
T  15179977 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgactaacgaaaattgtattttcataa 15179889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 19725454 - 19725366
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaattttt-attttaatacataaattctcactaatgaaaattgtatcttcata 236  Q
    |||||||||||||||||||||||| || |||  ||||| ||||| ||||||||  ||||  ||||||||||||||||| ||||||||||    
T  19725454 ttttgagcttatgaaaaatagcttatgtaaaaaaataagttttttattttaatttataagctctcactaatgaaaattatatcttcata 19725366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 39931471 - 39931558
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||| | || |||  ||||| ||||||||||| |  ||||  ||||||||| |||||||||||||||||||    
T  39931471 tttgagcttatgaaaaatagcatatgtaaataaataagtttttattttattttataagctctcactaacgaaaattgtatcttcataa 39931558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 42617157 - 42617244
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||||| || |||  ||||| |||||||||||||  |||| || ||||||| ||||||  |||||||||||    
T  42617157 tttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagttttcactaacgaaaatcatatcttcataa 42617244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 11298742 - 11298656
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    |||||||||||||||||||||||| ||||||  |||||| ||||||  |||| | ||| |||||||||| ||||| | |||||||||    
T  11298742 ttttgagcttatgaaaaatagcttatgcaaataaataaacttttataataattcttaagttctcactaacgaaaactttatcttcat 11298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 42153073 - 42153171
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| |||||||||||||||||||| | |||||||||| ||||||  |||||  |||||| ||||| ||| | || ||||||| |||||||| |||||    
T  42153073 tttggattggcttatttttgagcttacgtaaaatagcttatgcaaataaataagcttttatgttaattcatgagttgtcactaacgaaaattgcatctt 42153171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 35124448 - 35124391
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||||||||||||||||||| |||||||||| |||| |||||| |||||    
T  35124448 cataaactaccttgacaagcttatgaatagtacataaaaggttatatatttgcataag 35124391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 52274100 - 52274202
Alignment:
Q  203 ataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaa 302  Q
    |||| |||||||| | |||||||||||||||||||| ||       | |||| |||||||| |||||||| ||||||||||||||| ||||||||||| |    
T  52274100 ataagttctcactgacgaaaattgtatcttcataagctgtttttt-cgtaaactaccttgataagcttatcaataatacataaaagtttatttatttgca 52274198  T
Q  303 taag 306  Q
    ||||    
T  52274199 taag 52274202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 15184706 - 15184618
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||| ||||||| ||||||||||| |  ||   ||||| |||||||||||||  |||| |||||||||| |||||||||||||||||||    
T  15184706 ttttaagcttatcaaaaatagcttatataagcaaataagtttttattttaatttataagttctcactaacgaaaattgtatcttcataa 15184618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 41071525 - 41071421
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||| ||| |||||||||||||||||||  | |||  |||||  |||||| |||||  | || ||||||||||||| ||||||| ||||    
T  41071525 tttggattggcttatattttagcttatgaaaaatagcttaagaaaataaataagcttttatgttaatttacaagttctcactaatgagaattgtaacttc 41071426  T
Q  234 ataag 238  Q
    |||||    
T  41071425 ataag 41071421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 43213437 - 43213532
Alignment:
Q  145 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    |||||||||||||  ||||||||| ||| ||||||  ||||||||||||| ||||| ||| | || ||| |||  ||||||||||||||||||||||    
T  43213437 ttatttttgagctcgtgaaaaataacttatgcaaataaataaatttttatgttaattcat-agttatcattaacaaaaattgtatcttcataagttg 43213532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 48667845 - 48667741
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||| |||| |||||||||||||| ||||||  |||||  |||||| ||||| ||||| |||| | | | |||||| |||||| |    
T  48667845 tttggattggcttatttttaagctcatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctgagtgaggaaaatagtatctcc 48667746  T
Q  234 ataag 238  Q
    |||||    
T  48667745 ataag 48667741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 1374358 - 1374445
Alignment:
Q  219 gaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||||||||| ||       |||||| |||| |||||||||||||||| || ||||||| ||| |||||||| |||||    
T  1374358 gaaaattgtatcttcataagctggttttttcataaactaccatgacaagcttatgaatcatgcataaaaacttttttatttgcataag 1374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 3564281 - 3564231
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||| ||||||||||| ||||||||||||| ||||||| ||||||||||    
T  3564281 cataaactaccttgacaaacttatgaataatatataaaagtttatttattt 3564231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 3564381 - 3564315
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 200  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||||  |||||  |||||| |||||    
T  3564381 tttggattgacttatttttgagcttatgaaaaatagcttatgcaaataaataatcttttatgttaat 3564315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 8130542 - 8130492
Alignment:
Q  256 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||| |||||| |||||||||||| |||||||||||||||||||| |||||    
T  8130542 taccctgacaaacttatgaataatgcataaaagcttatttatttgcataag 8130492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 8130634 - 8130560
Alignment:
Q  154 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgta 228  Q
    ||||||||||||||||||| ||||||  ||||| ||||||| ||||| ||||| || |||||||  |||||||||    
T  8130634 agcttatgaaaaatagcttgtgcaaataaataagtttttatgttaattcataagttttcactaacaaaaattgta 8130560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 21216353 - 21216391
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaa 287  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  21216353 cataaactaccttgacaagcttatgaataatacataaaa 21216391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 22303221 - 22303167
Alignment:
Q  183 ataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||| |||||||||||||  ||||| | |||||||||||||||||||||||||||    
T  22303221 ataagtttttattttaatttataaactttcactaatgaaaattgtatcttcataa 22303167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 27368188 - 27368234
Alignment:
Q  260 ttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  27368188 ttgacaaacttatgaataatatataaaagcttatttatttgcataag 27368234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 306
Target Start/End: Original strand, 39932729 - 39932836
Alignment:
Q  198 aatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttat 297  Q
    |||| |||| |||||||||||  ||||||||||||||||| |||       |||| | |||||| |||| ||||| ||||||||||||||| ||||||||    
T  39932729 aataaataagttctcactaatagaaattgtatcttcataaattgtttttt-catacactaccttaacaatcttataaataatacataaaagtttatttat 39932827  T
Q  298 ttgaataag 306  Q
    ||| |||||    
T  39932828 ttgcataag 39932836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 43699369 - 43699455
Alignment:
Q  143 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtat 229  Q
    |||||||||| | || || ||||||||||| ||||||  ||||| ||||||| ||||| ||||| ||| ||||| ||||||||||||    
T  43699369 gcttattttttatctcattaaaaatagcttatgcaaataaataagtttttatgttaattcataagttcccactagtgaaaattgtat 43699455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 212973 - 213029
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||| |||||||||||||||||| |||||| |||||||||||| |||||    
T  212973 cataaactaccttaacaagcttatgaataataaataaaa-cttatttatttgcataag 213029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 23297406 - 23297451
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||||    
T  23297406 tttggattggcttatttttgagcttatgcaaaatagcttatgcaaa 23297451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 277
Target Start/End: Complemental strand, 28663747 - 28663606
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||||||||||||||||||||||||| || |||||   | |||  |||||| ||| | ||||| |||||| ||| |||||||||||||||    
T  28663747 tttggattgacttatttttgagcttatgaaaaatagtttatgcaactaattaagcttttatgttagttcataagttctca-taacgaaaattgtatcttc 28663649  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaata 277  Q
    | ||  ||       |||||| ||||||||||||||||||||||    
T  28663648 agaatctg-ttttttcataaactaccttgacaagcttatgaata 28663606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 35405851 - 35405755
Alignment:
Q  141 tggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataag 238  Q
    |||||||||||| ||||||||||||||||||| ||||||  |||||  |||||| |||||  || |  ||| ||||| ||||||| ||||||||||||    
T  35405851 tggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattaat-aggtcttactaacgaaaattctatcttcataag 35405755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 48722002 - 48721889
Alignment:
Q  127 ggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattg 226  Q
    |||||| ||||  ||| ||||||||| ||||||| |||||||  || | ||||  |||||  |||||| ||||| ||||| ||||||||||  ||||||     
T  48722002 ggacccgtttgaattgacttattttttagcttataaaaaataatttatacaaataaataagcttttatattaattcataagttctcactaacaaaaatta 48721903  T
Q  227 tatcttcataagtt 240  Q
    ||||||||||||||    
T  48721902 tatcttcataagtt 48721889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 2547973 - 2548061
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||| ||| ||||| ||||||  ||||| ||||||| |||||  |||| |||||| ||  ||||||| |||||||||||    
T  2547973 ttttgagcttatgagaaagagcttatgcaaataaataagtttttatattaatttataagttctcattagcgaaaattttatcttcataa 2548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 4331398 - 4331350
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttat 297  Q
    |||||| |||||||||||  |||||||||||| ||||||||||||||||    
T  4331398 cataaactaccttgacaaagttatgaataataaataaaagcttatttat 4331350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 8057120 - 8057164
Alignment:
Q  256 taccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||    
T  8057120 taccttgacaagcttatgaataataaataaaaacttatttttttg 8057164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 19414275 - 19414187
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||| |||||||||||||||| || |||  |||||  |||||||||| |  ||||  ||||||||| |||||||||||||| ||||    
T  19414275 ttttgagtttatgaaaaatagcttatgtaaataaataagcttttattttactttataagctctcactaacgaaaattgtatcttaataa 19414187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 22117513 - 22117425
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||   ||||  ||||||||||||  |||| |||| ||||| |||||||| || |||||||    
T  22117513 ttttgagcttatgaaaaatagcttatgtaaatagataagcttttattttaatctataagttctgactaacgaaaattgcattttcataa 22117425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 29615421 - 29615385
Alignment:
Q  263 acaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||||||||||||||||||| ||||||||||||||    
T  29615421 acaagcttatgaataatacatataagcttatttattt 29615385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 47202985 - 47202897
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||| ||| |  |||  | |||  ||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  47202985 ttttgagcttatgaaaaataacttatataaataagtaagcttttattttaatttataagatctcactaacgaaaattgtatcttcataa 47202897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 48686999 - 48686959
Alignment:
Q  260 ttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  48686999 ttgacaagcttatgaatagtacataaaaacttatttatttg 48686959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 1374487 - 1374436
Alignment:
Q  128 gacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    ||||||||||| |||||||||||||||||||||| |||| | ||| ||||||    
T  1374487 gacccatttggattggcttatttttgagcttatgcaaaaaaacttatgcaaa 1374436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 11679054 - 11679141
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||| ||||||||||| | ||||  || ||  |||||| |||||  ||||||| | ||||| |||||||||||||||||||    
T  11679054 tttgagcttatcaaaaatagcttatacaaataaaaaacattttatgttaatttataaattttaactaacgaaaattgtatcttcataa 11679141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 11687333 - 11687420
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||| ||||||||||| | ||||  || ||  |||||| |||||  ||||||| | ||||| |||||||||||||||||||    
T  11687333 tttgagcttatcaaaaatagcttatacaaataaaaaacattttatgttaatttataaattttaactaacgaaaattgtatcttcataa 11687420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 300
Target Start/End: Complemental strand, 18258178 - 18258021
Alignment:
Q  135 ttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttca 234  Q
    |||| ||| |||||||||||||||||  |||||| ||| | ||||  |||||| ||||||||     ||||| || ||||||| |||||||||| |||||    
T  18258178 ttggattgtcttatttttgagcttatagaaaataacttatacaaataaataaacttttattt-----cataagttttcactaacgaaaattgtaacttca 18258084  T
Q  235 taagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||||       || |||  | ||||| ||| ||||||||||||||||||| ||||||||||||    
T  18258083 taagttg--tttttcaaaaaacatcttgataagtttatgaataatacataaaa-cttatttatttg 18258021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 23284750 - 23284805
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||| |||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  23284750 aataagtttttattttaatttataagctctcactaacgaaaattgtatcttcataa 23284805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 2702643 - 2702733
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    ||||||||| |||||| ||| | ||||||  | |||  |||||| ||||| |||||  ||| ||||||||||||||||| |||||||||||    
T  2702643 ttgagcttacgaaaaagagcatatgcaaataattaagcttttatgttaattcataagatcttactaatgaaaattgtatattcataagttg 2702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 11256598 - 11256676
Alignment:
Q  160 tgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataag 238  Q
    |||||||||| || ||||||  |||||  |||||| ||||| ||||| ||||| ||||  |||||||||||||||||||    
T  11256598 tgaaaaatagtttatgcaaataaataagcttttatgttaattcataagttctcgctaactaaaattgtatcttcataag 11256676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 29996678 - 29996720
Alignment:
Q  263 acaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||    
T  29996678 acaaacttatgaataatatataaaagcttatttatttgcataa 29996720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 30956849 - 30956787
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataa 206  Q
    ||||||||| ||||||||||||||||||| ||||||  ||||| ||||||  ||||| |||||    
T  30956849 cttattttttagcttatgaaaaatagcttatgcaaataaataagtttttacattaattcataa 30956787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 35010272 - 35010222
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||| ||| ||||||| ||||| |||||||||||||| |||||||||||    
T  35010272 cataaactacgttgacaaacttataaataatacataaaaacttatttattt 35010222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 35124346 - 35124400
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    |||| ||||||||| ||| |||||||||||||||||| |||| ||||| ||||||    
T  35124346 aagggcccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaa 35124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 40699330 - 40699384
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttat 194  Q
    |||||||||| ||||||||||| |||| ||||| ||||||  |||||||||||||    
T  40699330 ttggcttattattgagcttatgcaaaacagcttatgcaaataaataaatttttat 40699384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 55638120 - 55638162
Alignment:
Q  263 acaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||| |||||||||||||||||||||||| |||||||| ||||    
T  55638120 acaaacttatgaataatacataaaagcttgtttatttgcataa 55638162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 825743 - 825686
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| || || |||| |||||||||||||| | ||||||||||||||||| |||||    
T  825743 cataaactaactagacaggcttatgaataatatagaaaagcttatttatttgcataag 825686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 298
Target Start/End: Original strand, 38515689 - 38515726
Alignment:
Q  261 tgacaagcttatgaataatacataaaagcttatttatt 298  Q
    |||||||||||||||||||||||| | |||||||||||    
T  38515689 tgacaagcttatgaataatacatagaggcttatttatt 38515726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 38876054 - 38876107
Alignment:
Q  155 gcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaat 208  Q
    |||||||||||||||||| ||||||  |||||| |||||| ||||| |||||||    
T  38876054 gcttatgaaaaatagcttatgcaaataaataaacttttatgttaattcataaat 38876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 43415328 - 43415365
Alignment:
Q  263 acaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  43415328 acaaccttatgaataatacataaaaacttatttatttg 43415365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 4331506 - 4331406
Alignment:
Q  133 atttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    |||||| || |||||| |||||| |||||||||||| ||| || |||  ||||| ||||||| ||||| ||||||||   ||||| |||| |||||| ||    
T  4331506 atttggatttgcttatctttgagtttatgaaaaataacttatgtaaataaataagtttttatgttaattcataaatttctactaacgaaagttgtatatt 4331407  T
Q  233 c 233  Q
    |    
T  4331406 c 4331406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 29997335 - 29997375
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagc 289  Q
    |||||| |||||||| |||||||||||||||| ||||||||    
T  29997335 cataaactaccttgataagcttatgaataatatataaaagc 29997375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 30956744 - 30956692
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacat-aaaagcttatttatttg 300  Q
    |||||| |||||||| |||||| ||| |||||||| |||||||||||||||||    
T  30956744 cataaactaccttgagaagcttgtgagtaatacataaaaagcttatttatttg 30956692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 34633510 - 34633459
Alignment:
Q  189 ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    |||||| ||||| ||||| |||||||| ||||||||||||| |||||||||||    
T  34633510 ttttatgttaattcataagttctcacttatgaaaattgtat-ttcataagttg 34633459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 43699601 - 43699569
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaa 166  Q
    ||||| |||||||||||||||||||||||||||    
T  43699601 tttggattggcttatttttgagcttatgaaaaa 43699569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 43983408 - 43983464
Alignment:
Q  250 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| || ||| |||||||||| |||||||||| || ||||||||||||| |||||    
T  43983408 ataaactatcttaacaagcttataaataatacattaatgcttatttatttgtataag 43983464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 46650312 - 46650276
Alignment:
Q  269 ttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  46650312 ttatgaataatacatgaaagcttatttatttgcataa 46650276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 4e-36; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 125 - 300
Target Start/End: Original strand, 33321214 - 33321388
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 224  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||  ||||||  ||||| ||||| || ||  |||||||||  |||||    
T  33321214 aagggcccatttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaataaacctttatgttaattcacaagctctcactaacaaaaat 33321313  T
Q  225 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||||||||||| ||       |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  33321314 tgtatcttcataagctg-ttttttcataaactaccttgacaagcttatgaataagacataaaagcttatttatttg 33321388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 306
Target Start/End: Complemental strand, 4027093 - 4026930
Alignment:
Q  141 tggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 240  Q
    |||||||||||| ||||||||||||||||||| ||||||  |||||  | |||| ||||| ||||| ||||||||||  ||||||||||||||||||| |    
T  4027093 tggcttatttttaagcttatgaaaaatagcttatgcaaataaataagctattatgttaattcataagttctcactaacaaaaattgtatcttcataagct 4026994  T
Q  241 gnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |       |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  4026993 g-ttttttcataaactaccttgacaagcttatg-ataatacataaaagcttatttatttgcataag 4026930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 292
Target Start/End: Original strand, 36501426 - 36501583
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||  |||||  |||||| ||||| ||| | |||||||||| | ||||| |||||||    
T  36501426 tttggattggcttatttttgagcttgtgaaaaatagcttatgcaaataaataagcttttatgttaattcatgagttctcactaacgcaaattttatcttc 36501525  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagctta 292  Q
    ||||| ||       |||||| |||||||||||||||||||||||||||||||| ||||    
T  36501526 ataagctg-ttttttcataaactaccttgacaagcttatgaataatacataaaaactta 36501583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 887587 - 887416
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||| |||||| ||||| ||||||| ||||| ||||||   ||||  |||||| ||||| ||||| ||||  ||||||||||||||||||||    
T  887587 tttggattggctaattttttagcttttgaaaaacagcttatgcaaatagataagcttttatgttaattcataagttcttgctaatgaaaattgtatcttc 887488  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||  |       |||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  887487 ataagcaggtttta-cataaactaccttgacaagcttatgaataatacaaaaaagcttatttatttgcataag 887416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 21788615 - 21788460
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||||| ||| ||||||  |||||  |||||| ||||| |||||  ||||||||| ||||||| |||||||||||||||       ||    
T  21788615 ttgagcttatgaaaaataacttatgcaaataaataagcttttatattaattcataagctctcactaacgaaaattttatcttcataagttg-ttttttca 21788517  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataaga 307  Q
    |||| || ||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  21788516 taaactatcttaacaagcttatgaataataaataaaagcttatttatttgcataaga 21788460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 25836634 - 25836794
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 243  Q
    |||||||||||||||||||| |||| ||| ||||||  |||||  |||||| ||| | ||||| |||||||||| || |||||| ||||||||||  |      
T  25836634 cttatttttgagcttatgaagaataccttatgcaaataaataagcttttatgttatt-cataagttctcactaacgataattgtgtcttcataagccgtt 25836732  T
Q  244 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
         |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  25836733 tttt-cataaactaccttgacaagcttatgaataatacataaaagcatatttatttgcataag 25836794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 4004985 - 4004823
Alignment:
Q  143 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgn 242  Q
    ||||||||||||| |||||||||||||||| |||| |  || ||  ||||||  |||| ||||| |||||||||| |||||||||| ||||||||||||     
T  4004985 gcttatttttgagtttatgaaaaatagcttatgcagataaaaaagcttttatagtaattcataagttctcactaacgaaaattgtagcttcataagttg- 4004887  T
Q  243 nnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
          |||||| ||| || | ||||||||||||| |||||||||| ||||||||||| |||||    
T  4004886 tattttcataaactactttaaaaagcttatgaatagtacataaaagattatttatttgcataag 4004823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 134 - 300
Target Start/End: Complemental strand, 8832632 - 8832464
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||||||||| ||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| || ||||||| ||||||||||||||     
T  8832632 tttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatcttt 8832533  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatg---aataatacataaaagcttatttatttg 300  Q
     |||  ||       |||||| |||||||| |||||||||   |||||||||||||||||||||||||||    
T  8832532 ctaacctg-tgttttcataaactaccttgaaaagcttatgattaataatacataaaagcttatttatttg 8832464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 285
Target Start/End: Complemental strand, 38216188 - 38216044
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 239  Q
    ||||||||||||| |||||| |||||||||||| ||||||  |||||  |||||| ||||  ||||| |||||||||| |||||||||||||||||| |     
T  38216188 ttggcttattttttagcttacgaaaaatagcttatgcaaataaataagcttttatgttaactcataagttctcactaacgaaaattgtatcttcatatgc 38216089  T
Q  240 tgnnnnnnncataaattaccttgacaagcttatgaataatacataa 285  Q
    |        | |||| ||||||||||||||||||||||||||||||    
T  38216088 t-attttttcctaaactaccttgacaagcttatgaataatacataa 38216044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 288
Target Start/End: Complemental strand, 39592407 - 39592271
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||||||||||||||||||||||| ||||||| |||||  |||| |||  || |||||||||||||||| ||||||| ||||||| |||| |            
T  39592407 ttttgagcttatgaaaaatagcttatgcaaagaaataagcttttgttt--attcataaattctcactaaagaaaattatatcttcttaagct-ttatttt 39592311  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaag 288  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  39592310 cataaactaccttgacaagcttatgaataatgcataaaag 39592271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 306
Target Start/End: Complemental strand, 29774928 - 29774749
Alignment:
Q  126 aggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaatt 225  Q
    ||||||| ||||| ||| |||||||||||||| | ||||||||| ||  |||||  |||||  |||||  ||||| ||||| |||||||||| |||||||    
T  29774928 aggacccgtttggattgacttatttttgagctaacgaaaaatagtttaagcaaataaataagcttttacgttaattcataagttctcactaacgaaaatt 29774829  T
Q  226 gtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||| ||||||||  |       |||||| |||||| |||| || ||||||||| |||||||| ||||||||||| |||||    
T  29774828 gtattttcataagccg-ttttttcataaactaccttaacaaactaatgaataatgcataaaagtttatttatttgcataag 29774749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 286
Target Start/End: Complemental strand, 4533487 - 4533346
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 243  Q
    ||||||||||||||||||||||||||||| ||||||  |||||  || |||  |||| ||||| || |||||||  |||||||||| ||||| |||||      
T  4533487 cttatttttgagcttatgaaaaatagcttatgcaaataaataagcttctatgctaattcataagttgtcactaacaaaaattgtatattcatgagttgtt 4533388  T
Q  244 nnnnncataaattaccttgacaagcttatgaataatacataaa 286  Q
         |||||||||| |||||||| || |||||||||||||||    
T  4533387 tttatcataaattactttgacaagatt-tgaataatacataaa 4533346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 306
Target Start/End: Complemental strand, 11777142 - 11776988
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||| ||||||||||| ||||||  |||||  |||||| ||| |  |||| ||||||||||  |||| |||||||||||||| ||       ||    
T  11777142 ttgagcttattaaaaatagcttctgcaaataaataaggttttatgttagtttataagttctcactaacaaaaagtgtatcttcataagctgtgtttt-ca 11777044  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||| || ||| |||||||||| |||||||||||||||||||||||| || |||||    
T  11777043 taaactaacttaacaagcttataaataatacataaaagcttatttatatgcataag 11776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 7480821 - 7480917
Alignment:
Q  145 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    |||| ||| ||||||| |||||||| || ||||||  ||||| ||||||| ||||| ||||| |||| ||||||||||||||||||||| |||||||    
T  7480821 ttatcttttagcttataaaaaatagattatgcaaataaataagtttttatgttaattcataagttctgactaatgaaaattgtatcttcctaagttg 7480917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 8441618 - 8441530
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||  | || ||||||  ||||| |||| |||||||| |||||||||||||||| |||||||||| ||||||||    
T  8441618 ttttgagcttatgaaaaagtgtttatgcaaataaataagttttaattttaattcataaattctcactaaagaaaattgtaccttcataa 8441530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 134 - 305
Target Start/End: Original strand, 13056238 - 13056408
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||||||| |||||||||| |||||||| || | ||||   ||||  ||| || ||||| ||||| |||||  ||| |||||||| ||||||    
T  13056238 tttggattggcttattgttgagcttatcaaaaatagtttatacaaatagataagctttaatgttaattcataagttctcgttaacgaaaattgcatcttc 13056337  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||| |         ||||| |||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  13056338 ataagctattttttt-ataaactaccttgacaagcttatgaaaaatacataaaagcttatctatttgcataa 13056408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 35515429 - 35515509
Alignment:
Q  157 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||| ||||| | ||||  ||||||||||||| ||||| |||||| ||||||||||||||||| || ||||||||    
T  35515429 ttatgaaaaagagcttatacaaataaataaatttttatcttaattcataaactctcactaatgaaaattataccttcataa 35515509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 755726 - 755818
Alignment:
Q  208 ttctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||||||||  ||||||||||||||||||| ||       |||||| |||| | |||||||| ||||||||||||||||||||| |||||||    
T  755726 ttctcactaacaaaaattgtatcttcataagctgtttttttcataaactaccgtaacaagcttctgaataatacataaaagcttaattatttg 755818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 33321428 - 33321485
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||||||||||||||||||| |||||||||||| |||| ||||||| |||||    
T  33321428 cataaactaccttgacaagcttatgagtaatacataaaaacttaattatttgcataag 33321485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 34913415 - 34913472
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| || ||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  34913415 cataaactatcttaacaaacttatgaataatacataaaagcttatttatttgcataag 34913472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 299
Target Start/End: Complemental strand, 15155973 - 15155824
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||||||||||||||||| ||||| || |||  ||||| ||||||| ||||| ||||| |||||| ||| | |||||||| |||| ||| |||           
T  15155973 ttttgagcttatgaaaaagagcttatgaaaataaataagtttttatcttaattcataagttctcattaacggaaattgtaccttcttaaattg-tttttt 15155875  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||| | | || ||||| |||| |||||||||||||||| |||||||||    
T  15155874 cataaacttcattaacaagattataaataatacataaaagcatatttattt 15155824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 22898283 - 22898371
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| || | ||||| ||||||||||| |||||||    
T  22898283 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttttgactaacgaaaattgtattttcataa 22898371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 5903713 - 5903537
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaat-----tctcactaatgaaaattgta 228  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||  |||||  |||||| || || | ||| |     |||||||||  |||||||||    
T  5903713 tttggattggcttatttttgagctcatgaaaaatagcttatgcaaataaataagcttttatgtttattcttaagttctcatctcactaacaaaaattgta 5903614  T
Q  229 tcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||| ||       ||| || ||| ||||||||||||||| |||||||  || |||| |||||||| |||||    
T  5903613 tcttcataagatg-ttttttcattaactactttgacaagcttatgagtaatacactaatgcttgtttatttgcataag 5903537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 306
Target Start/End: Original strand, 12238453 - 12238565
Alignment:
Q  190 tttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagc 289  Q
    ||||| ||||| |||||  ||| ||||| ||||||||||| ||||||||||        |||||| |||||| |||||||||| |||||||||| || ||    
T  12238453 tttatgttaattcataagatcttactaacgaaaattgtatgttcataagtt----ttttcataaactaccttaacaagcttataaataatacattaatgc 12238548  T
Q  290 ttatttatttgaataag 306  Q
    ||||||||||| |||||    
T  12238549 ttatttatttgcataag 12238565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 2790095 - 2790153
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagc-ttatttatttgaataag 306  Q
    |||||| ||||||||||||||||| |||||| ||||||||| ||||||||||| |||||    
T  2790095 cataaaataccttgacaagcttatcaataatgcataaaagctttatttatttgcataag 2790153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 4090543 - 4090493
Alignment:
Q  256 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||||    
T  4090543 taccttgacaagattatgaataatacatcaaagtttatttatttgcataag 4090493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 11073007 - 11072949
Alignment:
Q  249 cataaattaccttgacaagcttatgaat-aatacataaaagcttatttatttgaataag 306  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||| |||| |||||    
T  11073007 cataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataag 11072949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 12223953 - 12223862
Alignment:
Q  208 ttctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||||||||||||||| ||||||||||||  ||       |||||| |||||||||| ||||||||||||||||| |||| ||| |||||||    
T  12223953 ttctcactaatgaaaatggtatcttcataaactgtttttt-cataaactaccttgacaggcttatgaataatacatgaaaggttacttatttg 12223862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 32521972 - 32522058
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    ||||||||||||| |||||||||| || |||  ||||| ||| |||||||||  ||||  ||| ||||| |||||||||||||||||    
T  32521972 ttttgagcttatgtaaaatagcttatgtaaataaataagtttatattttaatttataagctcttactaacgaaaattgtatcttcat 32522058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 38471719 - 38471805
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||| ||||||||||| | ||| | ||||  |||||||| |||| ||||| ||||| |||||||||| |||||||||| ||||||||    
T  38471719 ttgaacttatgaaaaagaacttatacaaataaataaattgttatcttaattcataagttctcactaacgaaaattgtaccttcataa 38471805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 297
Target Start/End: Original strand, 42839259 - 42839393
Alignment:
Q  161 gaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattacct 260  Q
    |||||||||||| |||||   |||||  |||||| |||||  |||| || || |||| |||||||| ||||||||||| ||       |||||| || ||    
T  42839259 gaaaaatagcttatgcaattaaataagcttttatgttaattgataagttttctctaacgaaaattgcatcttcataagctggtttt--cataaactaact 42839356  T
Q  261 tgacaagcttatgaataatacataaaagcttatttat 297  Q
    |||||| |||||||||||||||||||| |||||||||    
T  42839357 tgacaaacttatgaataatacataaaaacttatttat 42839393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 2790189 - 2790144
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||    
T  2790189 tttgggttggcttatttttgagcttatgcaaaacagcttatgcaaa 2790144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 5903790 - 5903745
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||    
T  5903790 tttggattggcttatttttgagctcatgaaaaatagcttatgcaaa 5903745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 35731189 - 35731148
Alignment:
Q  259 cttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  35731189 cttgacaaactcatgaataatacataaaagcttatttatttg 35731148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 37420090 - 37420009
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataa 206  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||  || ||||||  |||||  |||||| ||||| |||||    
T  37420090 aagggcccatttggattggcttattttttagcttatgaaaaataatttatgcaaataaataagcttttatgttaattcataa 37420009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 12683643 - 12683687
Alignment:
Q  261 tgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||    
T  12683643 tgacaagcttatgaataatacattaaaacttatttatttgcataa 12683687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 27703500 - 27703540
Alignment:
Q  266 agcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  27703500 agcttatgaataatatataaaagcttatttatttgcataag 27703540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 29133704 - 29133748
Alignment:
Q  261 tgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| ||||||||||||||||||||| ||||||||||| ||||    
T  29133704 tgacaaacttatgaataatacataaaagattatttatttgcataa 29133748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 12442874 - 12442831
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagctta 292  Q
    |||||| || ||||||||||||||||||||||| ||||||||||    
T  12442874 cataaactatcttgacaagcttatgaataatacctaaaagctta 12442831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 172
Target Start/End: Complemental strand, 37409811 - 37409780
Alignment:
Q  141 tggcttatttttgagcttatgaaaaatagctt 172  Q
    ||||||||||||||||||||||||||||||||    
T  37409811 tggcttatttttgagcttatgaaaaatagctt 37409780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 43787800 - 43787884
Alignment:
Q  220 aaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||||||||||||||||||||       |||||  |||||  ||||| |||||||||||||||||||| ||||||||||| ||||    
T  43787800 aaaattgtatcttcataagttgtttttt-cataagctacctaaacaagtttatgaataatacataaaagtttatttatttgtataa 43787884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 446585 - 446499
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||  || || |||  | |||  ||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  446585 ttgagcttatgaaaaataatttatgtaaataagtaagcttttattttaatttataagctctcactaacgaaaattgtatcttcataa 446499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 14365264 - 14365230
Alignment:
Q  131 ccatttgggttggcttatttttgagcttatgaaaa 165  Q
    |||||||||||||||||||||| ||||||||||||    
T  14365264 ccatttgggttggcttatttttcagcttatgaaaa 14365230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 2401555 - 2401636
Alignment:
Q  156 cttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||  || || |||  |||||||||||||||||||  |||| |||| |||||  |||||||||| |||||||    
T  2401555 cttatgaaaaataatttatgtaaataaataaatttttattttaatctataagttctgactaacaaaaattgtattttcataa 2401636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 12442991 - 12442934
Alignment:
Q  120 aaacaaaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgca 177  Q
    |||| |||||||| ||||| || ||||| |||||||||||||||||| ||||| ||||    
T  12442991 aaaccaaggacccgtttggattagcttaattttgagcttatgaaaaacagcttatgca 12442934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 22422071 - 22422163
Alignment:
Q  125 aaggacccatttgggttg-gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaa 217  Q
    |||| ||||||||| ||| |||||||||  ||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  |||||||||    
T  22422071 aaggtcccatttggtttgagcttatttta-agcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctctcactaa 22422163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 41554625 - 41554662
Alignment:
Q  269 ttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  41554625 ttatgaataatacataaaagtttatttatttgtataag 41554662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 42382804 - 42382691
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 224  Q
    |||||| | ||||| ||| ||||||||| ||||||||||||  || || || |||  ||||| ||||||| | ||| ||| | |||||||||| |||| |    
T  42382804 aaggactcgtttggattgacttatttttaagcttatgaaaagcagtttatgtaaatcaataagtttttatgtcaattcattagttctcactaacgaaatt 42382705  T
Q  225 tgtatcttcataag 238  Q
    || |||||||||||    
T  42382704 tgcatcttcataag 42382691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 43787739 - 43787788
Alignment:
Q  130 cccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    ||||||||| ||| ||||||||| |||||||||||||||| || ||||||    
T  43787739 cccatttggattgacttattttttagcttatgaaaaatagtttatgcaaa 43787788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 27243575 - 27243607
Alignment:
Q  262 gacaagcttatgaataatacataaaagcttatt 294  Q
    |||||||||||||||||||| ||||||||||||    
T  27243575 gacaagcttatgaataatacgtaaaagcttatt 27243607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 30382195 - 30382279
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||||||||||||||||||| || || |||  |||||  |||| |||||||  ||||  | ||||||| |||||||||||||||    
T  30382195 ttttgagcttatgaaaaatagattatgtaaataaataagcttttgttttaatttataagctttcactaacgaaaattgtatcttc 30382279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 37419989 - 37420044
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| |||||||||||  |||||||| | ||||||||||||||||||||| ||||    
T  37419989 cataaactaccttgacaaaattatgaatta-acataaaagcttatttatttgcataa 37420044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 38010582 - 38010689
Alignment:
Q  135 ttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttatt--ttaatacataaattctcactaatgaaaattgtatctt 232  Q
    |||| ||| ||||| ||||||||||||||||||||||| | ||||  ||||| ||||| ||  ||||| ||||| || |||||||  |||||| |||| |    
T  38010582 ttggattgtcttatctttgagcttatgaaaaatagcttatacaaataaataagtttttttttgttaattcataagttttcactaacaaaaattatatcat 38010681  T
Q  233 cataagtt 240  Q
     |||||||    
T  38010682 aataagtt 38010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 40301479 - 40301431
Alignment:
Q  189 ttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||  ||||| ||||||||| ||||| |||||||||||||    
T  40301479 ttttattttaatttataaactctcactaacgaaaagtgtatcttcataa 40301431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 42382666 - 42382622
Alignment:
Q  256 taccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||||||||| |||||||||||||| || || ||||||||||||    
T  42382666 taccttgacaaacttatgaataatacgtacaaacttatttatttg 42382622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 44475478 - 44475526
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgtatc 230  Q
    ||||| ||||||| ||||| | ||| |||||||||||||||||||||||    
T  44475478 aataagtttttatgttaattcgtaagttctcactaatgaaaattgtatc 44475526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 148 - 306
Target Start/End: Complemental strand, 32975848 - 32975691
Alignment:
Q  148 tttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 247  Q
    ||||||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||| ||  ||||||||||||||||||||||          
T  32975848 tttttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcacaaacaaaaattgtatcttcataagttg-tgttt 32975750  T
Q  248 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
     |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  32975749 tcataaactaccttgacaagcttatgaataatatataaaagcttatttatttgcataag 32975691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 144 - 299
Target Start/End: Original strand, 34286485 - 34286638
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 243  Q
    |||||||||||||||||||||||||| || ||||||  |||||  |||||| ||||| ||||| ||||| |||| |||||||||||||||||||| ||      
T  34286485 cttatttttgagcttatgaaaaataggttatgcaaataaataagcttttatattaattcataagttctccctaacgaaaattgtatcttcataagctg-- 34286582  T
Q  244 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
         || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34286583 tttttcacaaactaccttgacaagcttatgaataatacataaaagcttatttattt 34286638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 306
Target Start/End: Complemental strand, 32131603 - 32131444
Alignment:
Q  146 tatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnn 245  Q
    |||||||||||||||||||||||| || ||||||   ||||  |||||| ||||| ||||| ||||||||| ||||||||||||||||||| ||||        
T  32131603 tatttttgagcttatgaaaaatagtttatgcaaatagataagcttttatgttaattcataagttctcactattgaaaattgtatcttcataggttg-ttt 32131505  T
Q  246 nnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
       |||||| ||||||||||| |||| ||||||| |||||||||||||||||||| |||||    
T  32131504 attcataaactaccttgacaaacttaggaataatgcataaaagcttatttatttgcataag 32131444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 24350440 - 24350600
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 243  Q
    |||||||||||||||||||||| |||||| ||||||  |||||  |||||| ||||| ||||| |||| ||||| ||||||| |||||||||||| |       
T  24350440 cttatttttgagcttatgaaaactagcttatgcaaataaataagattttatgttaattcataagttcttactaacgaaaattatatcttcataagct-at 24350538  T
Q  244 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
         |||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  24350539 tttttcataaattacgttgacaagcttatgaataatatataaaagcttaattatttgcataa 24350600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 28879230 - 28879062
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattct--cactaatgaaaattgtatct 231  Q
    ||||| ||| ||||||||| ||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||  ||||||  |||||     ||    
T  28879230 tttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctttcactaacaaaaat-----ct 28879136  T
Q  232 tcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||       |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28879135 tcataagttgttattt-cataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 28879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 134 - 305
Target Start/End: Original strand, 10298838 - 10299007
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||| ||   |  |||||| ||||| ||||| |||||| |||  ||||||||||||||    
T  10298838 tttggattggcttatttttgagcttatgaataatagcttatgcaaa-tagatagcttttatgttaattcataagttctcattaacaaaaattgtatcttc 10298936  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||| ||       |||||| ||||||||||||||||||||| ||||| ||||| | ||||||||| ||||    
T  10298937 ataagctg-ttttttcataaactaccttgacaagcttatgaatgatacaaaaaagttaatttatttgcataa 10299007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 134 - 300
Target Start/End: Original strand, 16972267 - 16972433
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||| ||||||||||||  |||||||||| ||||||  |||||| |||||| || || ||||| || ||||||| |||||||||||||||    
T  16972267 tttggattgacttaattttgagcttattcaaaatagcttatgcaaataaataaacttttatattgattcataagttatcactaacgaaaattgtatcttc 16972366  T
Q  234 ataagttgnnnnnnncataaattacctt-gacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||| ||       ||| || |||||| ||||| ||||||||||||||||| |||||||||||||||    
T  16972367 ataagctg-ttttttcatgaactaccttagacaaacttatgaataatacatacaagcttatttatttg 16972433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 9131059 - 9131210
Alignment:
Q  154 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataa 253  Q
    ||||||||||||||||||| ||||||  |||||| |||||| ||||| ||||| |||  ||||| |||||||||||||||||||| ||       || ||    
T  9131059 agcttatgaaaaatagcttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtatcttcataagctg-tttcttcagaa 9131157  T
Q  254 attaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    | ||  | ||||||||||| |||||||||||||||||||| |||||| |||||    
T  9131158 actaaatcgacaagcttataaataatacataaaagcttatatatttgcataag 9131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 32212926 - 32213104
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc--- 230  Q
    ||||| |||||||||||||  |||||||||||||||||| ||||||  |||||  |||||| ||| |  |||| |||||||||||||||||||| ||       
T  32212926 tttggattggcttatttttttgcttatgaaaaatagcttatgcaaataaataagcttttatgttattttataagttctcactaatgaaaattgtgtcttc 32213025  T
Q  231 ---ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
       ||| || | ||       |||||| || | |||||||||||||||||||||||||||||||||||||||| |||||    
T  32213026 ttattcttatgctgttattttcataaactaacctgacaagcttatgaataatacataaaagcttatttatttgcataag 32213104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 10213870 - 10213766
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||  |||||  || ||| ||||| ||||| ||||||||||  |||||||| |||||    
T  10213870 tttggattggattatttttgagcttatgaaaaatagcttatgcaaataaataagcttgtatgttaattcataagttctcactaacaaaaattgtttcttc 10213771  T
Q  234 ataag 238  Q
    |||||    
T  10213770 ataag 10213766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 41145322 - 41145480
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    ||||||||||||||||||||| || ||||||  ||||| ||| ||| ||||| ||||| ||||||||||||||||| ||||||| | ||||||           
T  41145322 ttttgagcttatgaaaaatagtttatgcaaataaataagtttatatattaattcataagttctcactaatgaaaatcgtatcttta-aagttg-tttttt 41145419  T
Q  249 cataaattaccttgacaagcttatg---aataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||| |||| ||||||   ||||||| ||||||||||||||||||| |||||    
T  41145420 cataaactaccttaacaaacttatgaataataataaataaaagcttatttatttgcataag 41145480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 306
Target Start/End: Complemental strand, 19925715 - 19925561
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||||||||| || |||  ||||| | |||||||||||   |||  ||||||||| ||||||||||||||||||| |||       |     
T  19925715 ttgagcttatgaaaaatagcttatgtaaataaataagtatttattttaatttgtaagctctcactaacgaaaattgtatcttcataaattg-ttttttcg 19925617  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||| |||||| |||| ||||| |||||||  |||||||||||||||||| |||||    
T  19925616 taaaataccttaacaaacttataaataataattaaaagcttatttatttgcataag 19925561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 29218177 - 29218265
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||| |||||||||||||||| || |||   |||| |||||||||||||  ||||| ||||||||||||||||| |||||||||||    
T  29218177 ttttgaggttatgaaaaatagcttatgtaaatacataagtttttattttaatttataaactctcactaatgaaaattatatcttcataa 29218265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 35168466 - 35168512
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttattt 295  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  35168466 cataaactaccttgacaagcttatgaataatacataaaagcttattt 35168512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 37410839 - 37410925
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    |||||||||||||||||||||||| || |||  ||||| ||| |||||||||  |||| |||| ||||| |||||||||||||||||    
T  37410839 ttttgagcttatgaaaaatagcttatgtaaataaataagtttatattttaatttataagttcttactaacgaaaattgtatcttcat 37410925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 306
Target Start/End: Complemental strand, 2669806 - 2669652
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||| ||||| || |||  |||||  |||||| ||||| |||||  ||  ||||||||||| ||||| |||||||||||       ||    
T  2669806 ttgagcttatgaaaaagagcttatgaaaataaataagcttttatgttaattcataagatcctactaatgaaaaatgtatattcataagttg-ttttttca 2669708  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||| |||||| |||| ||||| |||||||||| | |||||||||||||| |||||    
T  2669707 taaactaccttaacaaacttataaataatacattagagcttatttatttgcataag 2669652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 13265534 - 13265489
Alignment:
Q  260 ttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13265534 ttgacaagcttatgaataatacataaaagcttatttatttgcataa 13265489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 35453471 - 35453414
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  35453471 cataaactaccttgataaacttatgaataatacataaaagcttatttatttgcataag 35453414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 35055581 - 35055494
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  |||||  |||||||| ||| |||||  ||||||||| |||||||||||||||||||    
T  35055581 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattt-aattcataagctctcactaacgaaaattgtatcttcataa 35055494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 38895819 - 38895663
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    ||||||||||||||||| ||| || | ||||  ||||| ||||||| |||||  |||| || |||||||  || ||||||||||||||| ||            
T  38895819 ttttgagcttatgaaaattagtttatacaaataaataagtttttatattaatttataagttttcactaacaaatattgtatcttcataaatt-atttttt 38895721  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||| |||||||||||||||||| ||||||| |||||| |||| |||||    
T  38895720 cataaactaccttaacaagcttatgaataataaataaaagtttatttttttgcataag 38895663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 9788969 - 9788879
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 240  Q
    |||||||||||||||||||||||| || |||  |||| |||||||  ||||| ||||| ||||||||||  |||| ||||||||||||||||    
T  9788969 ttttgagcttatgaaaaatagcttatgaaaataaatatatttttaaattaattcataagttctcactaa-caaaaatgtatcttcataagtt 9788879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 25333635 - 25333718
Alignment:
Q  157 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 240  Q
    |||||||||||||||| || |||  |||||  |||||| ||||| ||||| || ||||||| ||||||||||||||||||||||    
T  25333635 ttatgaaaaatagcttatgtaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatcttcataagtt 25333718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 38338778 - 38338865
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||| |||||||||||||||| || |||  ||||| |||||||||||||  |||| |||||||||| ||||||  |||||||||||    
T  38338778 tttgagattatgaaaaatagcttatgtaaataaataagtttttattttaatttataagttctcactaacgaaaatcatatcttcataa 38338865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 153 - 297
Target Start/End: Complemental strand, 14942580 - 14942437
Alignment:
Q  153 gagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncata 252  Q
    ||||||||| |||||||||||||||||  |||||  |||||| |||||  |||| ||||  ||||  ||||||| |||||||||||| |       ||||    
T  14942580 gagcttatggaaaatagcttttgcaaataaataaggttttatgttaatttataagttcttgctaacaaaaattgcatcttcataagtcg-ttttttcata 14942482  T
Q  253 aattaccttgacaagcttatgaataatacataaaagcttatttat 297  Q
    || || ||| |||||||||| ||||||||| ||||||||||||||    
T  14942481 aactaacttaacaagcttataaataatacacaaaagcttatttat 14942437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 42102266 - 42102180
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  ||||  ||||| ||| |||||||||||||||||    
T  42102266 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataacctctcattaacgaaaattgtatcttcat 42102180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 24866877 - 24866966
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataag 238  Q
    |||||||||||||||||| ||||| ||||||  ||||| ||||||| |||||  |||| |||||  ||| |||||||||| |||||||||    
T  24866877 ttttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaatttataagttctcgataacgaaaattgtaccttcataag 24866966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 1089074 - 1089018
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| ||| |||||||||||||||||||||||| ||| |||||||||||| ||||    
T  1089074 cataaagtacattgacaagcttatgaataatacattaaaacttatttatttgcataa 1089018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 11988356 - 11988268
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||| ||| || |||  ||||   ||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  11988356 ttttgagcttatgaaaaataacttatgtaaataaatatgcttttattttaatttataagctctcactaacgaaaattgtatcttcataa 11988268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 12607239 - 12607151
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||| ||||||||||||||||||| || |||  |||||  ||||||||||||  ||||  ||||||||| | |||||||||||||||||    
T  12607239 ttttaagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataagctctcactaacggaaattgtatcttcataa 12607151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 13131479 - 13131435
Alignment:
Q  261 tgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||    
T  13131479 tgacaaacttatgaataatacataaaagcttatttatttgcataa 13131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 15763263 - 15763207
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaattt 190  Q
    ||||| ||| |||||||||||| |||||||||||||||| |||||| ||||||||||    
T  15763263 tttggattgacttatttttgagtttatgaaaaatagcttatgcaaattaataaattt 15763207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 25465781 - 25465865
Alignment:
Q  157 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    |||||||||||||||| ||||||  |||||  |||||| ||||| ||||| || ||| |||  ||||||||||||||||||||||    
T  25465781 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttttcagtaacaaaaattgtatcttcataagttg 25465865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 28280869 - 28280801
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaa 217  Q
    |||||||||||||||||| ||||| ||||||  ||||| ||||||| ||||| ||||| ||||||||||    
T  28280869 ttttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagttctcactaa 28280801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 10480029 - 10480067
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagctt 172  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  10480029 tttggattggcttatttttgagcttatgaaaaatagctt 10480067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 32131400 - 32131453
Alignment:
Q  126 aggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    ||||||||||||| ||| |||||||||||||||||| |||| ||||| ||||||    
T  32131400 aggacccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaa 32131453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 35285989 - 35285932
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| ||||| ||||||||||||| ||| ||||||||||||||||| |||||    
T  35285989 cataaactactttgacgagcttatgaataacacacaaaagcttatttatttgcataag 35285932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 14262486 - 14262394
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    |||||||||||| ||||| | ||| ||||||  ||||| ||||||| ||||| |||||  ||| |||||  |||||||||| |||||||||||    
T  14262486 ttttgagcttataaaaaagaacttatgcaaaaaaataagtttttatgttaattcataagatcttactaacaaaaattgtatattcataagttg 14262394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 19327914 - 19327871
Alignment:
Q  263 acaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||    
T  19327914 acaaacttatgaataatacataaaagtttatttatttgcataag 19327871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 9782340 - 9782251
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    |||||||||||||||| ||||  ||||||  | ||| ||||||| ||||| |||||  ||| ||||| ||||||||||| |||||||||||    
T  9782340 ttgagcttatgaaaaagagctgatgcaaaa-attaactttttatgttaattcataagatcttactaacgaaaattgtatattcataagttg 9782251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 11460823 - 11460785
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagctt 172  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  11460823 tttggattgacttatttttgagcttatgaaaaatagctt 11460785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 29243107 - 29243145
Alignment:
Q  268 cttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  29243107 cttataaataatacataaaagcttatttatttgcataag 29243145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 32924139 - 32924230
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaat----ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    ||||||||||||| |||||||| ||||||  |||||||    |||||| ||||| ||||| || ||||||| ||||||| |||||||||||||||    
T  32924139 ttgagcttatgaagaatagcttatgcaaa--aataaataagcttttatattaattcataagttttcactaa-gaaaattttatcttcataagttg 32924230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 9130962 - 9131035
Alignment:
Q  168 agcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    ||||| ||||||  |||||| |||||| ||||| ||||| |||  ||||| |||||||||||||||||| ||||    
T  9130962 agcttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtatcttcataggttg 9131035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 11460878 - 11460841
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagct 171  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  11460878 tttggattgacttatttttgagcttatgaaaaatagct 11460841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 24087346 - 24087249
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatct 231  Q
    ||||| ||| ||||||||||||   |||||||||||||| ||||||  |||||  ||||||||||||  |||| || ||| ||| |||||| ||||||    
T  24087346 tttggattgacttatttttgagtgaatgaaaaatagcttatgcaaataaataagcttttattttaatttataagttttcattaacgaaaatggtatct 24087249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 300
Target Start/End: Original strand, 34102733 - 34102762
Alignment:
Q  271 atgaataatacataaaagcttatttatttg 300  Q
    ||||||||||||||||||||||||||||||    
T  34102733 atgaataatacataaaagcttatttatttg 34102762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 14709561 - 14709617
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| || ||||||||||||||||||  ||| |||||||||||||| ||| ||||    
T  14709561 cataaactagcttgacaagcttatgaattgtacttaaaagcttatttagttgcataa 14709617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 29390462 - 29390632
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||||||||||||||||||||||||| || ||||||  |||||  |||||| ||||| ||||||||||  |||| |||||||||||||||    
T  29390462 tttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcataaattctagctaacgaaaattgtatcttc 29390561  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||       |||||| |||||| ||||||||||||||||||||| |||| ||||||||||| |||||    
T  29390562 ataagttg--tttttcataaactacctttacaagcttatgaataatacatcaaagattatttatttgcataag 29390632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 29378829 - 29378649
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 224  Q
    |||| ||| ||||| ||| |||||||||||| |||||||||||||||| ||||||  |||||  |||||  ||||| ||||| |||| ||||| ||||||    
T  29378829 aagggcccgtttggattgacttatttttgagtttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttcttactaacgaaaat 29378730  T
Q  225 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||| ||       |||||| ||||||||||| || || ||||||||||||||||||||||||||| |||||    
T  29378729 tgtatcttcataagctg-ttttttcataaactaccttgacaaactcataaataatacataaaagcttatttatttgcataag 29378649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 140 - 306
Target Start/End: Complemental strand, 34923102 - 34922935
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 239  Q
    ||||||||||||||||||||| ||||||||||| ||||||  |||||  |||||| ||| | ||||| |||||||||| ||||| |||||||||| |||     
T  34923102 ttggcttatttttgagcttataaaaaatagcttatgcaaataaataagcttttatgttagttcataagttctcactaacgaaaagtgtatcttcacaagc 34923003  T
Q  240 tg-nnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||         ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  34923002 tgtttttttttataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataag 34922935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 151 - 306
Target Start/End: Original strand, 44613401 - 44613555
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| |||| | |||| ||||||||||| ||||||||||       ||    
T  44613401 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctaattaataaaaattgtatcgtcataagttg-ttttttca 44613499  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  44613500 taaactaccttaacaagcttatgaataataaataaaagcttatttatttgcataag 44613555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 300
Target Start/End: Original strand, 14691219 - 14691376
Alignment:
Q  143 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgn 242  Q
    |||||||||| |||||||||||||||| |  ||||||  |||||  |||||| ||||| ||||| |||||||||| ||||||| ||||||||||| |||     
T  14691219 gcttattttttagcttatgaaaaatagttcatgcaaataaataaccttttatgttaattcataagttctcactaacgaaaattatatcttcataaattg- 14691317  T
Q  243 nnnnnncataaattaccttgacaagcttatgaataatacataaaagc-ttatttatttg 300  Q
          |||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  14691318 ttttttcataaattacattgacaagcttatgaataatacataaaagctttatttatttg 14691376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 47511220 - 47511047
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctca--ctaatgaaaattgtatct 231  Q
    ||||| |||| ||||||||||| |||||||||||||||| ||||    ||||| ||||||| ||||| ||||| ||||||  | ||||||||||||||||    
T  47511220 tttggattggtttatttttgaggttatgaaaaatagcttatgcagttaaataattttttatgttaattcataagttctcaccccaatgaaaattgtatct 47511121  T
Q  232 tcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||| ||       |||| | | |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  47511120 tcataagctg-ttttttcatagacttccttaacaagcttatgaataatacataaaagcttatttatttgcataag 47511047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 38372733 - 38372562
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||| |||||||||||||||||||||||||||  ||||||  ||| |  |||||| ||||| ||||| |||||||||| ||||||||| |||||    
T  38372733 tttggattgggttatttttgagcttatgaaaaatagctaatgcaaataaatcagcttttatgttaattcataagttctcactaacgaaaattgtttcttc 38372634  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
     | || ||       | |||| ||||||||||| |||||||||||||||||| |||||||||||||| |||||    
T  38372633 ttgagctg-ctttttcgtaaactaccttgacaaacttatgaataatacataagagcttatttatttgcataag 38372562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 20888739 - 20888578
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 243  Q
    ||||||||||||||||||||||||| ||| ||||||  | ||| ||||||| |||||  |||| || ||||  | ||||||||||||||||||| |||      
T  20888739 cttatttttgagcttatgaaaaataacttatgcaaataagtaagtttttatgttaatttataagttttcacggaagaaaattgtatcttcataaattg-t 20888641  T
Q  244 nnnnncataaattaccttgacaagcttatgaataatacat-aaaagcttatttatttgaataa 305  Q
         |||||| ||||||  |||||||||||||||||||| ||||||||||||||||| ||||    
T  20888640 tttttcataaactacctttgcaagcttatgaataatacataaaaagcttatttatttgcataa 20888578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 300
Target Start/End: Complemental strand, 30181727 - 30181560
Alignment:
Q  131 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 230  Q
    |||||||  ||| ||||||||| ||||||| || ||||| || ||||||  |||||  |||||| ||||| ||||| ||| ||||||||||||  |||||    
T  30181727 ccatttgtattgccttattttttagcttat-aataatagtttatgcaaataaataagcttttatgttaattcataagttcccactaatgaaaacagtatc 30181629  T
Q  231 ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||||| ||        ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  30181628 ttcataagctgttttttg-ataaactaccttgacaagcttatgaataatacataaaagcttctttatttg 30181560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 33287986 - 33288090
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||||||||||||||||||||||| |||||| | ||||  ||||| ||||||| ||||| ||||| || ||||||| ||||| |||||||||    
T  33287986 tttggattggcttatttttgagcttatgaaaactagcttatccaaataaataagtttttatgttaattcataagttttcactaacgaaaactgtatcttc 33288085  T
Q  234 ataag 238  Q
    |||||    
T  33288086 ataag 33288090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 22032922 - 22032766
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||||||||||||||||| ||||| ||||||  ||||| ||||||| |||||  |||| |||||||||| |||||||||| |||||||| |||           
T  22032922 ttttgagcttatgaaaaaaagcttatgcaaataaataagtttttatcttaatttataagttctcactaacgaaaattgtaccttcataaattg-tttttt 22032824  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| || ||| |||||| |||||||||||||| | |||||||||| |||||    
T  22032823 cataaactacattaacatgcttataaataatacataaaaacatatttatttgcataag 22032766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 1312273 - 1312185
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  |||||| ||||||||||||  ||||| ||||||||||||||| ||||| |||||||    
T  1312273 ttttgagcttatgaaaaatagcttatgtaaataaataaacttttattttaatttataaactctcactaatgaaaagtgtatattcataa 1312185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 25908469 - 25908366
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||||||||||||| ||||||||||| |||| ||||||  ||||| ||||||| |||||  |||| || |||| || |||||||||||||||    
T  25908469 tttggattggcttatttttgaggttatgaaaaatggcttatgcaaataaataagtttttatgttaatttataacttttcacaaacgaaaattgtatcttc 25908370  T
Q  234 ataa 237  Q
    ||||    
T  25908369 ataa 25908366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 48021607 - 48021728
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatac 281  Q
    ||||| ||||||| ||||| ||||| || ||||||||||||||||||||||||| ||||        |||||| ||| || ||||||||||||||||||     
T  48021607 aataattttttatattaattcataagttttcactaatgaaaattgtatcttcattagtt--atttttcataaactactttaacaagcttatgaataataa 48021704  T
Q  282 ataaaagcttatttatttgaataa 305  Q
    |||| |||||||||||||| ||||    
T  48021705 ataagagcttatttatttgcataa 48021728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 41037813 - 41037757
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  41037813 cataaattaccttgacaagctt-tgaataatacataaaagcttatttatttgcataag 41037757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 43818806 - 43818883
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgta 228  Q
    |||||||||||||||| ||||| ||||||  ||||| ||||||| ||||| ||||| |||||||||||||||||||||    
T  43818806 ttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagttctcactaatgaaaattgta 43818883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 991659 - 991571
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  ||||| ||||||||| ||||| |||||||||||||    
T  991659 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataaactctcactaacgaaaagtgtatcttcataa 991571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 40629344 - 40629446
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||| ||||||   ||||| ||||| ||||| ||||||| ||  ||||| ||||||||    
T  40629344 tttggattggcttatttttgagcttatgaaaaatagcttaggcaaa-taataagcatttatattaattcataagttctcacaaacaaaaatagtatcttc 40629442  T
Q  234 ataa 237  Q
    ||||    
T  40629443 ataa 40629446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 33205009 - 33204915
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgta 228  Q
    ||||| ||||||||||||| ||||||||||||||| ||| ||||||  |||||  |||||| ||||| ||||| |||||||||| || |||||||    
T  33205009 tttggattggcttattttttagcttatgaaaaatatcttatgcaaataaataagcttttatgttaattcataagttctcactaacgataattgta 33204915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 47654342 - 47654428
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||| | ||| ||||||  ||||| ||||||| ||||| ||||| |||||||||| |||||||||| ||||||||    
T  47654342 ttgagcttatgaaaaagatcttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaattgtaccttcataa 47654428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 41094318 - 41094223
Alignment:
Q  207 attctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||| ||||| ||||||||||||||||||||||        ||||||  |||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  41094318 attcttactaacgaaaattgtatcttcataagtt---tttttcataaaccaccttgacaagcttatgagtaatacataaaggcttatttatttgcataa 41094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 22575746 - 22575589
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||| ||||||||||||||||||| || | |  ||||| |||||||||||||  ||||  ||| ||||| |||||||||||||||||||  ||           
T  22575746 ttttaagcttatgaaaaatagcttatgtagataaataagtttttattttaatttataagctcttactaacgaaaattgtatcttcataaactg-tttttt 22575648  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataaga 307  Q
    |||||| || ||| |||| ||||| |||||||||||||| | |||||||||| ||||||    
T  22575647 cataaaatatcttaacaaacttataaataatacataaaaacgtatttatttgcataaga 22575589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 18765022 - 18765129
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaa-tttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| ||||||||||||| ||||||||||||||| |||  |||||  |||||| ||||||| |||||    || ||||||||||  |||||||||||||    
T  18765022 tttggattggcttattttttagcttatgaaaaataacttacgcaaataaataaactttttatattaatttgcaagttctcactaacaaaaattgtatctt 18765121  T
Q  233 cataagtt 240  Q
    ||||||||    
T  18765122 cataagtt 18765129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 23137094 - 23137177
Alignment:
Q  154 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||| || |||  | |||  ||||||||||||  ||||  |||||||||||||||||||||||||||||    
T  23137094 agcttatgaaaaatagcttatgtaaataagtaagcttttattttaatttataagctctcactaatgaaaattgtatcttcataa 23137177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 33288134 - 33288181
Alignment:
Q  259 cttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  33288134 cttgacaagctaatgaataatacataaaagcttatttatttgcataag 33288181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 49104295 - 49104378
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    |||||||||||  ||||||| || ||||||  ||||||||||||| ||||| |||||||||||||| || |||||  |||||||    
T  49104295 tttgagcttatataaaatagattatgcaaataaataaatttttatgttaattcataaattctcactcataaaaatcatatcttc 49104378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 5947747 - 5947669
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaat 218  Q
    |||||||||| ||||| |||| ||||||||||| ||||||  |||||| | ||||| |||| | |||||||||||||||    
T  5947747 ttggcttattgttgagtttataaaaaatagcttatgcaaataaataaactcttattataattcgtaaattctcactaat 5947669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 24371353 - 24371436
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||||| || |    ||||| ||||||||||| |  ||||  ||||||||| |||||||||||||||||||    
T  24371353 tttgagcttatgaaaaatagcttatgta----aataagtttttattttattttataagctctcactaacgaaaattgtatcttcataa 24371436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 35809248 - 35809093
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||| ||||| || |||  | |||  |||||| ||||| |||||| ||| |||   ||||||||||| ||| |||||||       ||    
T  35809248 ttgagcttatgaaaaagagcttatgtaaataattaagcttttatgttaattcataaaatcttactggcgaaaattgtatattcttaagttgtttttt-ca 35809150  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataaga 307  Q
    |||| ||| || |||||||||| |||||||||| || ||||||||||||| ||||||    
T  35809149 taaactacgttaacaagcttataaataatacattaatgcttatttatttgcataaga 35809093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 281
Target Start/End: Complemental strand, 39279605 - 39279458
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctc-actaatgaaaattgtatctt 232  Q
    ||||| |||||||  |||||||||||||||||||||||| | ||||  |||||  |||||| ||||| ||||  ||||| | ||| ||||||||||||||    
T  39279605 tttggattggcttgattttgagcttatgaaaaatagcttatacaaataaataagcttttatgttaattcataggttctcaattaacgaaaattgtatctt 39279506  T
Q  233 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatac 281  Q
    | |||| ||       ||||||  ||||| |||||||||||||||||||    
T  39279505 cctaagctg-atttttcataaaccaccttaacaagcttatgaataatac 39279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 40629449 - 40629498
Alignment:
Q  256 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  40629449 taccttgacaagcttatgaataatacat-aaagtttatttatttggataag 40629498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 44799560 - 44799474
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||| || || |||  ||||| |||||||||||||  ||||  ||||||||| ||| ||| |||||||||||    
T  44799560 ttgagcttatgaaaaatagtttatgtaaataaataagtttttattttaatttataagctctcactaacgaatattctatcttcataa 44799474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 7098125 - 7098181
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| || |||||||| |||||||||||| ||||||| |||||||||||| ||||    
T  7098125 cataaactatcttgacaaacttatgaataattcataaaatcttatttatttgtataa 7098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 7774673 - 7774761
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||| ||||||| |||||||| || || |||  |||||| ||||| ||||||  ||||| |||||| || |||||||||||||||||||    
T  7774673 ttttcagcttataaaaaatagtttatgtaaataaataaacttttaatttaatttataaactctcaccaacgaaaattgtatcttcataa 7774761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 16012853 - 16012773
Alignment:
Q  154 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttca 234  Q
    |||||||||||||||||||  |||||  || ||||| |||  ||||| ||||| || ||||||| ||||||||||||||||    
T  16012853 agcttatgaaaaatagcttaagcaaataaaaaaattgttaggttaattcataagttttcactaacgaaaattgtatcttca 16012773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 18837276 - 18837232
Alignment:
Q  256 taccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| |||||||||||||||||||| | |||||||||||||||    
T  18837276 tacctttacaagcttatgaataatacacataagcttatttatttg 18837232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 25655730 - 25655674
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 200  Q
    ||||||||| | ||||||||||||| ||||||||||  ||||| |||||||||||||    
T  25655730 cttattttttaacttatgaaaaataacttttgcaaataaataagtttttattttaat 25655674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 32848696 - 32848612
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagt-aataaatttttattttaatacataaattctcactaatgaaaattgt 227  Q
    ||||||||| ||||||||||||||| ||| |||||| | |||||  |||||| |||||  ||||||| | |||||||||||||||    
T  32848696 cttattttttagcttatgaaaaataacttatgcaaaataaataaggttttatgttaatttataaattttaactaatgaaaattgt 32848612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 41677434 - 41677378
Alignment:
Q  250 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| ||| ||||||| ||||||||||||||||||||  ||||||||||| |||||    
T  41677434 ataaactacattgacaaacttatgaataatacataaaaatttatttatttgcataag 41677378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 16932857 - 16932944
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||||| || | |  |||||  ||||||||||||  ||||  | | ||||| |||||||||||||||||||    
T  16932857 tttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataa 16932944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 16938240 - 16938327
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||||| || | |  |||||  ||||||||||||  ||||  | | ||||| |||||||||||||||||||    
T  16938240 tttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataa 16938327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 16958974 - 16958887
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||||| || | |  |||||  ||||||||||||  ||||  | | ||||| |||||||||||||||||||    
T  16958974 tttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataa 16958887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 35246828 - 35246741
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||| | || |||  |||||  ||||||||||||  ||||   |||||||| |||||||||||| ||||||    
T  35246828 tttgagcttatgaaaaatagcctatgtaaataaataagcttttattttaatttataagccctcactaacgaaaattgtatcctcataa 35246741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 48895357 - 48895306
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| |||||||| |||||||||||||||| || || |||||||||||||    
T  48895357 cataaactaccttgataagcttatgaataatatatgaatgcttatttatttg 48895306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 306
Target Start/End: Original strand, 1054116 - 1054150
Alignment:
Q  272 tgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||||||||||||||||||| |||||    
T  1054116 tgaataatacataaaagcttatttatttgcataag 1054150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 21249198 - 21249160
Alignment:
Q  268 cttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  21249198 cttatgaataatacataaaaacttatttatttgcataag 21249160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 23356516 - 23356566
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||||||||||||||| ||| ||||||||||| |||  |||||||||||    
T  23356516 cataaattaccttgacaaacttgtgaataatacaaaaagccttatttattt 23356566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 288
Target Start/End: Original strand, 37465816 - 37465951
Alignment:
Q  153 gagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncata 252  Q
    ||||||||||||| |||||| ||||||  |||||  |||||| ||||| ||||| ||||| | ||  || |||||||||| ||||||||        |||    
T  37465816 gagcttatgaaaattagcttatgcaaataaataagcttttatattaattcataagttctcgccaacaaatattgtatcttaataagttgttttttctata 37465915  T
Q  253 aattaccttgacaagcttatgaataatacataaaag 288  Q
    || || ||| ||||| |||||||||||| |||||||    
T  37465916 aactatcttaacaagtttatgaataataaataaaag 37465951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 41094193 - 41094151
Alignment:
Q  264 caagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||    
T  41094193 caagcttatgaataatacatagaagtttatttatttgcataag 41094151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 42083442 - 42083492
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||||||  || |||| |||||||||||||||||||| |||||||||||    
T  42083442 cataaattatatttacaaacttatgaataatacataaaaacttatttattt 42083492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 18704307 - 18704352
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    ||||||||||||| |||||| |||||||| ||||||||| ||||||    
T  18704307 tttgggttggcttgtttttgtgcttatgagaaatagcttatgcaaa 18704352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 19914105 - 19914017
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||| |||||||||||||||| || |||  |||||  ||||||||||||| ||||  | | ||||| ||||||| | |||||||||    
T  19914105 ttttgagtttatgaaaaatagcttatgtaaataaataagcttttattttaatatataagcttttactaacgaaaattatctcttcataa 19914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 22515463 - 22515519
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 200  Q
    ||||||||| ||||||||||| ||||||| ||||||  ||||| ||||||| |||||    
T  22515463 cttatttttaagcttatgaaagatagcttatgcaaataaataattttttatgttaat 22515519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 24414574 - 24414534
Alignment:
Q  259 cttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    ||||||||||||||| |||||||||||| | ||||||||||    
T  24414574 cttgacaagcttatggataatacataaatgtttatttattt 24414534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 9e-34; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 140 - 306
Target Start/End: Original strand, 40580993 - 40581159
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 239  Q
    |||||||||||||||| | |||||||||| ||| ||||||  |||||  |||||| ||||| ||||| |||||||||| ||||||||| |||||||| |     
T  40580993 ttggcttatttttgagttgatgaaaaatatcttatgcaaataaataagattttatgttaattcataagttctcactaacgaaaattgtttcttcatacgc 40581092  T
Q  240 tgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||       |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  40581093 tgtttttttcataaactaccttgacaagcttattaataatacataaaagcttatttatttgcataag 40581159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 40240503 - 40240659
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||||||||||||||||||||||| ||||||  |||||  |||||| ||||| |||||  ||||||||| |||||||||||||||||||||||           
T  40240503 ttttgagcttatgaaaaatagcttatgcaaataaataagcttttatcttaattcataagctctcactaacgaaaattgtatcttcataagttg-tttttt 40240601  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||||| |||| ||||||||||||||||||||||||| |||||||| |||||    
T  40240602 cataaactacctagacacgcttatgaataatacataaaagcttctttatttgcataag 40240659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 298
Target Start/End: Original strand, 53217952 - 53218114
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||| ||||||||||||||| | | |||| |  |||||  ||||||||||||  |||| |||||||||| |||||||||||||||    
T  53217952 tttggtttggcttatttttaagcttatgaaaaatatcctatgcagaa-aataagcttttattttaatttataagttctcactaacgaaaattgtatcttc 53218050  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 298  Q
    | ||||||       |||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  53218051 aaaagttgtttttt-cataaactaccttgacaagcttatgaataatacataaaatcttatttatt 53218114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 43079845 - 43080016
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||||||  |||||||||||||||||||| | ||||  |||||  |||||  ||||| ||||| |||||| | | |||||||||||||||    
T  43079845 tttggattgacttatttacgagcttatgaaaaatagcttattcaaataaataagcttttaagttaattcataagttctcaatcacgaaaattgtatcttc 43079944  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| ||       |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  43079945 ataagctgtttttt-cataaactaccttgacaagcttatgaataacacataaaagcttatttatttgcataag 43080016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 22809104 - 22809276
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||| |||||||||||||||||||| | ||||| ||||||  ||||| ||||||| ||||| ||||| ||||   ||| |||||||||||||||    
T  22809104 tttggcttggtttatttttgagcttatgaaataaagcttgtgcaaataaataagtttttatgttaattcataagttcttcttaacgaaaattgtatcttc 22809203  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacat-aaaagcttatttatttgaataag 306  Q
    |||||  |       |||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  22809204 ataagcag-ttttttcataaactaccttgacaagcttatgaataatatataaaaagcttatttatttgcataag 22809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 134 - 305
Target Start/End: Complemental strand, 585194 - 585025
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    |||||||||||||||||||||||||||||||||||| || | ||||  |||||  || ||| ||||| | ||| |||  ||||| |||||||||||||||    
T  585194 tttgggttggcttatttttgagcttatgaaaaatag-ttattcaaatcaataagcttatatgttaattcttaagttcaaactaacgaaaattgtatcttc 585096  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||||||       |||||| |||||  | |||||| |||||||| |||||||||||||||||||| ||||    
T  585095 ataagttg-ttttttcataaactacctcaagaagcttttgaataatgcataaaagcttatttatttgcataa 585025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 300
Target Start/End: Original strand, 48597774 - 48597943
Alignment:
Q  131 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaataca-taaattctcactaatgaaaattgtat 229  Q
    |||||||| |||||||||||||||||||| |||||||||  ||||||||  |||||  |||||| ||||| || ||| |||||||| | |||||||||||    
T  48597774 ccatttggattggcttatttttgagcttacgaaaaatagtgtttgcaaataaataagcttttatgttaattcattaagttctcactgacgaaaattgtat 48597873  T
Q  230 cttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||||||||||       |||| | ||||| ||||| ||||||||||||  ||||||| |||| ||||||    
T  48597874 cttcataagttg-ttttttcatacactacctcgacaaacttatgaataatttataaaagtttatgtatttg 48597943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 20685960 - 20685853
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||||||||| |||||||||||||| |||| | ||||  ||||| |||||||  |||| || || ||||||||||||||||||||||||||    
T  20685960 tttggattgacttattttttagcttatgaaaaattgcttatccaaataaataagtttttatgataattcacaagttctcactaatgaaaattgtatcttc 20685861  T
Q  234 ataagttg 241  Q
    ||||||||    
T  20685860 ataagttg 20685853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 52021353 - 52021250
Alignment:
Q  203 ataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaa 302  Q
    |||| |||||||||| ||||||| |||||||||||| ||       |||||| ||||||||||| |||||||||||||||||||||| |||||||||| |    
T  52021353 ataagttctcactaacgaaaattatatcttcataagctgtttttttcataaactaccttgacaatcttatgaataatacataaaagcatatttatttgca 52021254  T
Q  303 taag 306  Q
    ||||    
T  52021253 taag 52021250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 299
Target Start/End: Original strand, 32901076 - 32901223
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||||||||| ||||||  ||||  ||||||| |||| | |||| |||||||||| ||||||| |||||||||||||||        |    
T  32901076 ttgagcttatgaaaaatagcttatgcaaataaatatgtttttatattaaaatataagttctcactaacgaaaattttatcttcataagttgttttctt-a 32901174  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||| || ||| ||||  || ||||||||| ||||||||||||||||||    
T  32901175 taaactatcttaacaaatttgtgaataataaataaaagcttatttattt 32901223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 52421166 - 52421217
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  52421166 cataaactaccttgacaagcttatgaataatacataaaagcttatttatttg 52421217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 299
Target Start/End: Original strand, 34707645 - 34707788
Alignment:
Q  155 gcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaa 254  Q
    |||||||||||||| |||  |||||  ||||| ||||||| ||||| | ||| ||||| |||| ||||||||||||||| | || ||       ||||||    
T  34707645 gcttatgaaaaataacttaagcaaataaataagtttttatgttaattcgtaagttctcgctaacgaaaattgtatcttcgttagctgtttttt-cataaa 34707743  T
Q  255 ttaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
     |||||| ||||||||||||||||||||||||||||||| |||||    
T  34707744 ctaccttaacaagcttatgaataatacataaaagcttatatattt 34707788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 300
Target Start/End: Complemental strand, 3846030 - 3845865
Alignment:
Q  134 tttgggttggcttatttttgagctta-tgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| ||| |||||||||||||||| ||| ||||||||| ||||||  |||||  |||||| ||||| ||||  || ||||||  |||||| |||||||    
T  3846030 tttggattgccttatttttgagcttaatgagaaatagcttatgcaaataaataagcttttatgttaattcatatgttttcactagcgaaaat-gtatctt 3845932  T
Q  233 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||| | ||       |||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  3845931 catatgctgttttgt-cataaactagcttgacaagcttatgaataatatataaaagcttatttatttg 3845865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 17752057 - 17752145
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  |||||| |||||| |||||  |||| |||| ||||| |||||||||||||||||||    
T  17752057 ttttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatcttcataa 17752145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 19053377 - 19053465
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  |||||| |||||| |||||  |||| |||| ||||| |||||||||||||||||||    
T  19053377 ttttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatcttcataa 19053465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 29270462 - 29270373
Alignment:
Q  208 ttctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 298  Q
    |||||| ||| |||||||||||||||||||| ||       ||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  29270462 ttctcattaacgaaaattgtatcttcataagctgtttttt-cataaattatcttgaaaagcttatgaataatacataaaagcttatttatt 29270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 29614353 - 29614265
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||||||| || |||  ||||| ||| |||||||||  ||||  ||||||||| |||||||||||||||||||    
T  29614353 ttttgagcttatgaaaaatagcttatgtaaataaataagtttatattttaatttataagctctcactaacgaaaattgtatcttcataa 29614265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 52895327 - 52895423
Alignment:
Q  145 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    ||||||||||||||||||||||| | ||  |||||  |||||  |||||| ||||| |||||||||||||||| |||||||||| ||||| ||||||    
T  52895327 ttatttttgagcttatgaaaaattgtttaggcaaataaataagcttttatgttaattcataaattctcactaacgaaaattgtaacttcagaagttg 52895423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 3870192 - 3870308
Alignment:
Q  189 ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaag 288  Q
    |||||| ||||| ||||| |||||| ||||||||| |||||| ||||| ||||       |||||| |||||||||||||||||||| || |||||||||    
T  3870192 ttttatgttaattcataagttctcattaatgaaaagtgtatcatcatatgttgtttttt-cataaactaccttgacaagcttatgaacaaaacataaaag 3870290  T
Q  289 cttatttatttgaataag 306  Q
    ||||||| |||| |||||    
T  3870291 cttatttttttgcataag 3870308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 306
Target Start/End: Original strand, 1516057 - 1516179
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatac 281  Q
    ||||| |||||||||||||  |||| ||||||||||||||||||||||||| ||||  ||       |||||| |||||| |||| ||||| ||||||||    
T  1516057 aataagtttttattttaatttataagttctcactaatgaaaattgtatctttataaactg-attttccataaaataccttaacaaacttataaataatac 1516155  T
Q  282 ataaaagcttatttatttgaataag 306  Q
    ||||| | |||||||||||||||||    
T  1516156 ataaatg-ttatttatttgaataag 1516179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 3645462 - 3645376
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    |||||||||||||||||||||||| || |||  ||||| ||| |||||||||  ||||  ||||||||| |||||||||||||||||    
T  3645462 ttttgagcttatgaaaaatagcttatgtaaataaataagtttatattttaatttataagctctcactaacgaaaattgtatcttcat 3645376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 21721067 - 21720981
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    ||||||| |||||||||||||||| ||||||  | ||| ||||||| ||||  ||||| |||||||||| |||||||||||||||||    
T  21721067 ttttgagtttatgaaaaatagcttatgcaaaaaagtaattttttatgttaagtcataagttctcactaacgaaaattgtatcttcat 21720981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 42956138 - 42956255
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatac 281  Q
    ||||| ||||||| |||||  |||| |||||||||| |||||||||||||| ||||| ||       |||||| ||| | |||||| |||||||||||||    
T  42956138 aataagtttttatgttaatttataagttctcactaacgaaaattgtatctttataagctgttttat-cataaactacttcgacaagtttatgaataatac 42956236  T
Q  282 ataaaagcttatttatttg 300  Q
    |||||| ||||||||||||    
T  42956237 ataaaaacttatttatttg 42956255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 43971773 - 43971922
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||||||||||||||||||| ||| ||||||  ||||  ||||||  |||| | |||| |||||||||| ||||||| ||||||||||| |||           
T  43971773 ttttgagcttatgaaaaataacttatgcaaataaatatgtttttaaattaaaatataagttctcactaacgaaaattttatcttcataaattg-ttttct 43971871  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||| ||  || |||| ||| ||||||||| ||||||||||||||||||    
T  43971872 cataaactattttaacaaacttgtgaataataaataaaagcttatttattt 43971922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 10521215 - 10521164
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  10521215 cataaactacattgacaagcttatgaataatacatataagcttatttatttg 10521164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 10667459 - 10667408
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  10667459 cataaactacattgacaagcttatgaataatacatataagcttatttatttg 10667408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 51409552 - 51409397
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    ||||||| ||||||||| |||||| | ||||  ||||| |||| || ||||| ||||| || ||| || || ||||| |||||||||||||||           
T  51409552 ttttgagattatgaaaagtagcttatacaaataaataagtttt-atattaattcataatttttcagtattggaaattttatcttcataagttgtttttt- 51409455  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||||||||||| || |||||||||| ||||||| ||||||||||| |||||    
T  51409454 cataaactaccttgacaaactcatgaataataaataaaagattatttatttgcataag 51409397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 29830564 - 29830653
Alignment:
Q  150 tttgagcttatgaaaaa--tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||  || ||| || |||  ||||| |||||||||||||  |||| |||||||||| |||||||||||||||||||    
T  29830564 tttgagcttatgaaaaaaataacttgtgtaaataaataagtttttattttaatttataagttctcactaacgaaaattgtatcttcataa 29830653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 33946478 - 33946568
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    |||||||||||||||||||||| ||||||  ||| |  |||||| ||||| ||||| |||||| ||| ||||||| ||||| |||||||||    
T  33946478 ttgagcttatgaaaaatagcttatgcaaataaatgagcttttatattaattcataagttctcattaacgaaaattttatctacataagttg 33946568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 3876189 - 3876338
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||||||||||||||||||||||| ||||||  ||||| ||||||| ||||| ||||| ||   |||||  |||| | || |||| |||||||           
T  3876189 ttttgagcttatgaaaaatagcttatgcaaataaataagtttttatattaattcataagttagaactaacaaaaactttaccttcttaagttg-tttttt 3876287  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||| |||||| || || |||||||||||| ||||||||| ||||||||    
T  3876288 cataaactaccttaactagattatgaataataaataaaagctaatttattt 3876338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 5129840 - 5129896
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| ||| |||||||||||||||||||||||| ||| |||||||||||| ||||    
T  5129840 cataaagtacattgacaagcttatgaataatacattaaaacttatttatttgcataa 5129896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 32983212 - 32983268
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 200  Q
    ||||||||||||||||| ||||||||||| ||||||  ||||||||||||| |||||    
T  32983212 cttatttttgagcttataaaaaatagcttatgcaaataaataaatttttatgttaat 32983268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 37243626 - 37243538
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||| ||||| ||||||  | |||  |||||| ||||| ||||| ||||||| |||||||| |||| ||||||||    
T  37243626 ttttgagcttatgaaaaagagcttatgcaaataagtaagcttttatcttaattcataagttctcaccaatgaaaagtgtaccttcataa 37243538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 53261676 - 53261776
Alignment:
Q  132 catttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttatt-ttaatacataaattctcactaatgaaaattgtatc 230  Q
    ||||||| ||| |||| |||||||||||||||||||||||| |||||   |||||  ||||||| ||||| ||||| |||||||| | |||| |||||||    
T  53261676 catttggattgacttagttttgagcttatgaaaaatagcttatgcaattaaataagcttttattgttaattcataagttctcactgacgaaagttgtatc 53261775  T
Q  231 t 231  Q
    |    
T  53261776 t 53261776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 20894662 - 20894576
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    |||||||||||| |||||||| || || |||  ||||| ||| |||||||||  ||||  ||||||||| |||||||||||||||||    
T  20894662 ttttgagcttataaaaaatagtttatgtaaataaataagtttatattttaatttataagctctcactaacgaaaattgtatcttcat 20894576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 46573365 - 46573443
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctc 212  Q
    ||||| || |||||||||| |||||| |||||||||||| ||||||  |||||  |||||| ||||| |||||||||||    
T  46573365 tttggattcgcttattttttagcttaggaaaaatagcttatgcaaataaataagcttttatgttaattcataaattctc 46573443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 300
Target Start/End: Original strand, 47403696 - 47403839
Alignment:
Q  157 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaatt 256  Q
    ||||| |||||| ||| ||||||  ||||||||||||| |||||  ||||   ||||| || ||||||||||||||||||| ||        |||||| |    
T  47403696 ttatggaaaataacttatgcaaataaataaatttttatgttaatttataagccctcacaaacgaaaattgtatcttcataaattattttttgcataaact 47403795  T
Q  257 accttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    || || ||||  ||||||||||||| ||||| ||||||||||||    
T  47403796 acatttacaaatttatgaataatacctaaaaacttatttatttg 47403839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 306
Target Start/End: Original strand, 24842104 - 24842189
Alignment:
Q  220 aaaattgtatcttcataagttgnnnnnnncataaattacctt-gacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||||||||||||       |||||||||| || ||||| ||||||||||||||||||||  ||||||||||| |||||    
T  24842104 aaaattgtatcttcataagttgttttt--cataaattacatttgacaaacttatgaataatacataaaaatttatttatttgcataag 24842189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 30321647 - 30321739
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||||||||||| |||||| |||||||||||| ||||||  |||||   |||| ||||||  |||| || |||| ||||||||||||||||||    
T  30321647 ttggcttattttttagcttaagaaaaatagcttatgcaaataaataagccttta-tttaatttataagttttcaccaatgaaaattgtatcttc 30321739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 299
Target Start/End: Original strand, 45331236 - 45331370
Alignment:
Q  164 aaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttga 263  Q
    ||||||||| ||||||  |||||| |||||| ||||| ||||  ||||  |||  |||||||||||||||||||| ||       |||||| |  ||| |    
T  45331236 aaatagcttatgcaaataaataaacttttatgttaattcatatgttcttgctagcgaaaattgtatcttcataagatgtttttt-cataaactgtcttaa 45331334  T
Q  264 caagcttatgaataatacataaaagcttatttattt 299  Q
    |||||||||| |||||||||||||| ||||||||||    
T  45331335 caagcttatgcataatacataaaaggttatttattt 45331370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 20174866 - 20174958
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    ||||||| |||||||||| ||||| ||||||  |||||  ||||||  |||| |||||  ||| ||||| ||||||||||| |||||||||||    
T  20174866 ttttgaggttatgaaaaagagcttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcataagttg 20174958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 306
Target Start/End: Original strand, 4257225 - 4257383
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatt--tttattttaatacataaattctcactaatgaaaattgtatcttcataagttg-nnnnn 246  Q
    ||||||||||||||||||||||| || |||  ||||| ||  ||| |||||||  ||||  ||||||||  |||||||||||||||||||  ||          
T  4257225 tttgagcttatgaaaaatagcttatgtaaataaataagtttgttttttttaatttataagctctcactagcgaaaattgtatcttcataaactgtttttt 4257324  T
Q  247 nncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
      |||||| |||||| | || ||||| |||||||||||||| |||||||||||| |||||    
T  4257325 ttcataaactacctt-aaaaacttataaataatacataaaaacttatttatttgcataag 4257383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 300
Target Start/End: Complemental strand, 10272167 - 10272132
Alignment:
Q  265 aagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||||||||||||||||||||| |||||||||||    
T  10272167 aagcttatgaataatacataaaagtttatttatttg 10272132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 31787686 - 31787619
Alignment:
Q  145 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctc 212  Q
    ||||||||||||||||||||||||| || ||||||  ||||||  ||||| ||||| ||||| |||||    
T  31787686 ttatttttgagcttatgaaaaatagtttatgcaaataaataaacgtttatattaattcataagttctc 31787619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 37778292 - 37778205
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||| ||||||||||||  || || |||  |||||  ||||||||||||  |||| ||||||||||  ||||||||||||||||||    
T  37778292 tttgagtttatgaaaaataatttgtgtaaataaataagcttttattttaatttataagttctcactaacaaaaattgtatcttcataa 37778205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 7292730 - 7292684
Alignment:
Q  260 ttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||| |||||||||||||||||| ||||||| |||||| |||||    
T  7292730 ttgacaaacttatgaataatacataagagcttatgtatttgcataag 7292684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 25341428 - 25341342
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||| ||||| || |||  ||||| ||||||| ||||| || || || || |||| ||||||| |||||||||||    
T  25341428 ttgagcttatgaaaaagagcttatgtaaataaataagtttttatattaattcacaagttttccctaacgaaaattttatcttcataa 25341342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 29002773 - 29002726
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatt 298  Q
    |||||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  29002773 cataaattactttgacaagcttatgaataatac--aaaagtttatttatt 29002726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 36266303 - 36266249
Alignment:
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||| |||||| |||| ||||| ||||||||||||||| ||||||||||| ||||    
T  36266303 taaaataccttaacaaacttataaataatacataaaagtttatttatttgcataa 36266249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 38524246 - 38524160
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||| ||||| ||||||  |||||  |||||| ||||| |||||  ||| ||||| |||||||| || |||||||    
T  38524246 ttgagcttatgaaaaagagcttatgcaaataaataagcttttatgttaattcataagatcttactaacgaaaattgcatattcataa 38524160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 50540426 - 50540464
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagctt 172  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  50540426 tttggattgtcttatttttgagcttatgaaaaatagctt 50540464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 10448835 - 10448778
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| || |||||||||| ||||||||||||| || |||||||||| |||||    
T  10448835 cataaactacattaacaagcttataaataatacataaaggcatatttatttgcataag 10448778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 53261869 - 53261820
Alignment:
Q  130 cccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    ||||||||| |||||||||||||||||||||| | || ||||| ||||||    
T  53261869 cccatttggattggcttatttttgagcttatggacaacagcttatgcaaa 53261820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 21296827 - 21296771
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| |||||||| || | ||||||||||| |||||| |||||||||||| ||||    
T  21296827 cataaactaccttgataaacgtatgaataatagataaaaacttatttatttgcataa 21296771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 23555521 - 23555489
Alignment:
Q  273 gaataatacataaaagcttatttatttgaataa 305  Q
    |||||||||||||||||||||||||||| ||||    
T  23555521 gaataatacataaaagcttatttatttgcataa 23555489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 29830716 - 29830772
Alignment:
Q  181 taataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||| |||||||||||||  |||| |||||| |||  ||||||||||||||||||    
T  29830716 taataagtttttattttaatttataagttctcagtaacaaaaattgtatcttcataa 29830772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 306
Target Start/End: Complemental strand, 28625648 - 28625484
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 239  Q
    ||||||||||||| ||||||||||||||| ||| ||||||  |||||  |||||| ||||| ||||  |||||||||| ||||||||||||||||||||     
T  28625648 ttggcttattttt-agcttatgaaaaataacttatgcaaataaataagcttttatgttaattcataggttctcactaacgaaaattgtatcttcataagc 28625550  T
Q  240 tgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||       |||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  28625549 tg-ttttttcataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcataag 28625484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 134 - 305
Target Start/End: Complemental strand, 12467443 - 12467269
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaata---cataaattctcactaatgaaaattgtatc 230  Q
    ||||| ||||||||||||| || |||||||||||| ||| ||||||  |||||  |||||| ||| ||   ||||| ||||||||||  |||||||| ||    
T  12467443 tttggattggcttattttttaggttatgaaaaataacttatgcaaataaataagcttttatgttagtaattcataagttctcactaacaaaaattgtctc 12467344  T
Q  231 ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||||| ||       |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12467343 ttcataagctgtttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataa 12467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 140 - 305
Target Start/End: Original strand, 29922106 - 29922270
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 239  Q
    |||||||||||||||| |||||||||||||||| ||||||  |||||  |||||| ||||| |||||  |||||||||  |||||||||| | ||||||     
T  29922106 ttggcttatttttgagtttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagctctcactaaaaaaaattgtatatgcataagc 29922205  T
Q  240 tgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||       |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  29922206 tgtgtttt-cataaactaccttgacaagcttatgaataatacataaaaacttatttatttgcataa 29922270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 298
Target Start/End: Complemental strand, 1869016 - 1868858
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||      || |||||| |||||  |||  |||||||||| |||||||||||||||    
T  1869016 tttggattggcttattttcgagcttatgaaaaatagcttatgcaaat-----aacttttatgttaattgatacgttctcactaacgaaaattgtatcttc 1868922  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 298  Q
    ||||||||       |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  1868921 ataagttgattttt-cataaactaccttgacaagcttgtgaataatacataaaagcttatttatt 1868858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 306
Target Start/End: Original strand, 41059708 - 41059871
Alignment:
Q  142 ggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    ||||||||||||||||||||||||| || || ||||||  |||||  |||||| ||||| ||||| |||||||||| |||||||| ||||||||||| ||    
T  41059708 ggcttatttttgagcttatgaaaaacagtttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgaatcttcataaggtg 41059807  T
Q  242 nnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
           ||||||  ||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  41059808 -atttttcataaacaaccttgataagcttatgaataatacataaaagcttatttgtttgcataag 41059871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 294
Target Start/End: Original strand, 40452379 - 40452548
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatg-aaaa 223  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||  |||||  | |||| || || ||||| |||||||||| | ||||    
T  40452379 aaggacctctttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagctattatgtttattcataagttctcactaacgaaaaa 40452478  T
Q  224 ttgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatt 294  Q
    || |||||||||||| ||       |||||| |||||||||||||||||||||||| ||||||||||||||    
T  40452479 ttatatcttcataagctg-tttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 40452548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 134 - 300
Target Start/End: Complemental strand, 1576806 - 1576641
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||  |||| | |||||| ||||| | ||| ||||||||||  |||||||||||||    
T  1576806 tttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgttaattcttaagttctcactaacaaaaattgtatctt 1576707  T
Q  233 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    || ||||||       |||||| ||| |||||||||||||||| |||||||||||| |||||||||||    
T  1576706 cacaagttg-tttttccataaactacattgacaagcttatgaa-aatacataaaagtttatttatttg 1576641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 134 - 300
Target Start/End: Original strand, 1608009 - 1608174
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||  |||| | |||||| ||||| | ||| ||||||||||  |||||||||||||    
T  1608009 tttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgttaattcttaagttctcactaacaaaaattgtatctt 1608108  T
Q  233 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    || ||||||       |||||| ||| |||||||||||||||| |||||||||||| |||||||||||    
T  1608109 cacaagttg-tttttccataaactacattgacaagcttatgaa-aatacataaaagtttatttatttg 1608174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 295
Target Start/End: Original strand, 31636997 - 31637165
Alignment:
Q  129 acccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaa----aat 224  Q
    |||||||||| ||||| |||||||||||||| |||||| ||||| |||||| ||| ||  |||||  ||||| ||||| ||||||| || |||    |||    
T  31636997 acccatttggattggcatatttttgagcttacgaaaaacagcttatgcaaa-taacaagcttttacgttaattcataagttctcacgaacgaacgaaaat 31637095  T
Q  225 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttattt 295  Q
    |||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  31637096 tgtatcttcataagctgttcttt-cataaattaccttgacaagcttatgaataatacataaaagcttattt 31637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 42852185 - 42852026
Alignment:
Q  145 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnn 244  Q
    |||||||| | |||||| |||| ||||| |||||   |||||  |||||| ||||| ||||| |||||||||| ||||||||||| || ||||||||       
T  42852185 ttattttttaacttatgcaaaacagcttatgcaactaaataagcttttatgttaattcataagttctcactaacgaaaattgtatttt-ataagttgttt 42852087  T
Q  245 nnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
        |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42852086 ttt-cataaactatcttgacaagcttatgaataatacataaaagcttatttatttgaataag 42852026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 148 - 306
Target Start/End: Complemental strand, 24030375 - 24030219
Alignment:
Q  148 tttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 247  Q
    ||||| ||||||| ||||||||||| ||||||  |||||  |||||| ||||| ||||| |||||||||| |||||||||||| ||  ||||            
T  24030375 ttttttagcttattaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgtatcctcgcaagt--gttttt 24030278  T
Q  248 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
     |||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24030277 tcataaactactttgacaagcttatgaataatacataaaagcttatttatttggataag 24030219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 40697181 - 40697005
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||  |||||  |||||| ||||| ||||| || |||  ||  ||||||||||||||    
T  40697181 tttggattggcttatttttgagcttatgaaaaatagcttatacaaataaataagcttttatgttaattcataagttttcaggaacaaaaattgtatcttc 40697082  T
Q  234 ataag----ttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||    ||        |||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  40697081 ataagctgttttttttcttcataaaataccttgacaagcttataaataatacataaaaacttatttatttgcataag 40697005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 5559836 - 5559985
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 239  Q
    ||||||||||||||||||  ||||||||||||| ||||||  |||||  |||||| | ||| |||||||||||||||| ||||||||||||||||||||     
T  5559836 ttggcttatttttgagctcgtgaaaaatagcttatgcaaataaataagcttttatgtaaattcataaattctcactaacgaaaattgtatcttcataagc 5559935  T
Q  240 tg--nnnnnnncataaattaccttgacaagcttatgaataatacataaaa 287  Q
    ||         |||||| ||||||||| |||||||||| |||||||||||    
T  5559936 tgcttttttttcataaactaccttgacgagcttatgaagaatacataaaa 5559985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 276
Target Start/End: Original strand, 2577348 - 2577481
Alignment:
Q  143 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatg-aaaattgtatcttcataagttg 241  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||| |||| ||||| ||||| |||||||||| | |||||||||| || | ||||||    
T  2577348 gcttatttttgagcttatgaaaaatagcttatgcaaataaataaattgttatgttaattcataagttctcactaacgaaaaattgtatttttacaagttg 2577447  T
Q  242 nnnnnnncataaattaccttgacaagcttatgaat 276  Q
           ||||||||||||||||||||||||||||    
T  2577448 -ttttttcataaattaccttgacaagcttatgaat 2577481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 125 - 299
Target Start/End: Original strand, 22201833 - 22202011
Alignment:
Q  125 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaatt-ctcactaatgaaaa 223  Q
    |||| ||| ||||| || |||||||||| |||||||||||||||| || | ||||  ||||| ||||||| ||| | ||||| || ||| |||| |||||    
T  22201833 aagggcccgtttggatttgcttattttttagcttatgaaaaatagtttatacaaataaataagtttttatgttatttcataactttctcgctaacgaaaa 22201932  T
Q  224 ttgtatcttcataag---ttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    ||||||||||| |||   ||        |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22201933 ttgtatcttcacaagcttttttttccttcataaactaccttgacaagcttatgaataatacataaaagcttatttattt 22202011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 10537137 - 10537301
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataa-atttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||   ||||  ||||||| ||||| ||||| |||||||||| |||||||||||| |    
T  10537137 tttggattggcttatttttgagtttatgaaaaatagcttatgcaaatatataagctttttatgttaattcataagttctcactaacgaaaattgtatcct 10537236  T
Q  233 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
         |||        |||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  10537237 -----gtt----ttttcataaactatcttgacaagcttataaataatacataaaagcttatttatttgcataag 10537301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 305
Target Start/End: Complemental strand, 41534806 - 41534628
Alignment:
Q  131 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaa-------- 222  Q
    |||||||| |||||||||||||||||||||||||||||| ||  |||||    ||| ||||||| ||||| ||||  |||||||||| ||||            
T  41534806 ccatttggattggcttatttttgagcttatgaaaaatagtttacgcaaa----taagtttttatgttaattcatatgttctcactaacgaaaccaacgaa 41534711  T
Q  223 -attgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
     |||||||||||||||| ||       | |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41534710 aattgtatcttcataagctgtttttt-cgtaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataa 41534628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 13060568 - 13060684
Alignment:
Q  189 ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaag 288  Q
    |||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| ||       |||||| |||||||||||||||||||| ||||||||||||    
T  13060568 ttttatgttaattcataagttctcactaacgaaaatggtaacttcataagctgtttttt-cataaactaccttgacaagcttatgaacaatacataaaag 13060666  T
Q  289 cttatttatttgaataag 306  Q
    |||||||||||| |||||    
T  13060667 cttatttatttgcataag 13060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 35537019 - 35536846
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||||||||||| |||||||||||||||| ||||||  |||||  |||||| || || ||||| |||||| ||| |||||||||||||||    
T  35537019 tttggattgacttatttttgagattatgaaaaatagcttatgcaaataaataagcttttatatt-attcataagttctcagtaacgaaaattgtatcttc 35536921  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagctt---atgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| ||       |||||| || ||||||||||||   |||||||| |||||||||||||| |||||| |||||    
T  35536920 ataagctg-ttttttcataaactatcttgacaagcttatgatgaataacacataaaagcttatgtatttgcataag 35536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 1943161 - 1943067
Alignment:
Q  143 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||| ||||||| |||| ||||||  |||||  ||||||  |||| ||||| ||||||||||||||||||||||||||||||    
T  1943161 gcttatttttgagcttacgaaaaatggcttatgcaaataaataagcttttatgctaattcataagttctcactaatgaaaattgtatcttcataa 1943067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 13625456 - 13625603
Alignment:
Q  159 atgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattac 258  Q
    |||||||||||||| ||||||  |||||| |||||| |||||  |||| || ||||||| ||||||| |||||| ||||| ||       |||||| |||    
T  13625456 atgaaaaatagcttatgcaaataaataaacttttatattaatttataagttttcactaacgaaaattttatctttataagctgtttttatcataaactac 13625555  T
Q  259 cttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||  |||||||||||||||||| |||||||| |||||||||| |||||    
T  13625556 ctcaacaagcttatgaataataaataaaagcatatttatttgcataag 13625603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 1473417 - 1473360
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  1473417 cataaattaacttgacaagcttatgaataatacataaaagcttatttatttgcataag 1473360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 299
Target Start/End: Complemental strand, 6144898 - 6144749
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    ||||||||||||||||||||| || ||||||  || ||  |||||| ||||| ||||| ||||| ||||  |||||||||| |||||||| |            
T  6144898 ttttgagcttatgaaaaatagtttatgcaaataaacaagcttttatattaattcataagttctcgctaacaaaaattgtatattcataagct-atttttt 6144800  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  6144799 cataaaataccttgacaagcttatgagtaatatataaaagcttatttattt 6144749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 17657384 - 17657246
Alignment:
Q  167 tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaa 266  Q
    |||||| ||||||  |||||  |||||| ||||| ||||| |||||||||| |||||| ||||||||||||| ||       |||||| |||  || |||    
T  17657384 tagcttatgcaaataaataaccttttatgttaattcataagttctcactaacgaaaatcgtatcttcataagatgtttttt-cataaactacaatggcaa 17657286  T
Q  267 gcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  17657285 gcttatgaataatacataaaagcttatttatttgcataag 17657246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 29659220 - 29659132
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||| ||||| ||||||  ||||| ||||||| ||||| ||||| |||||||||||||||||||||  |||||||    
T  29659220 ttttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagttctcactaatgaaaattgtactttcataa 29659132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 144 - 299
Target Start/End: Complemental strand, 14243990 - 14243834
Alignment:
Q  144 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatg-aaaattgtatcttcataagttgn 242  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||   ||||| ||||| ||||||||   | |||||||||| |||||||| ||     
T  14243990 cttatttttgagcttatgaaaaatagcttttgcaaataaataagtttttcagttaattcataagttctcactttcgaaaaattgtattttcataagctgt 14243891  T
Q  243 nnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
          |||||| |||||| |  | |||||||||| |||||| ||||||||||||||    
T  14243890 tttttccataaactaccttaaacaacttatgaatattacatagaagcttatttattt 14243834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 12987039 - 12987096
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  12987039 cataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcataag 12987096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 299
Target Start/End: Complemental strand, 6125461 - 6125298
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| ||| ||||||| ||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||||||  || ||||||| |||    
T  6125461 tttggattgacttctttttgaacttatgaaaaatagcttatgcaaataaataagcttttatattaattcataatttctcactaacaaatattgtatattc 6125362  T
Q  234 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    ||||| |        |||||| ||| || | ||| |||||||||||||||||||| ||||||||||    
T  6125361 ataagct--atttttcataaaatacatttataagattatgaataatacataaaagtttatttattt 6125298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 29418678 - 29418766
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||| || || ||||||  ||||| ||||||| |||||  ||||||||||||||| |||||||||| ||||||||    
T  29418678 ttttgagcttatgaaaaaaagtttatgcaaataaataagtttttatcttaatttataaattctcactaacgaaaattgtaccttcataa 29418766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 42706856 - 42706800
Alignment:
Q  250 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  42706856 ataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcataag 42706800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 298
Target Start/End: Original strand, 11912021 - 11912176
Alignment:
Q  142 ggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 241  Q
    |||||||||  |||||||||||||||| |||  |||||  |||||  ||| || ||||| ||||| ||||||||||  ||||||||||||||||||| |     
T  11912021 ggcttatttacgagcttatgaaaaatatcttgagcaaataaataagctttcatgttaattcataagttctcactaacaaaaattgtatcttcataagct- 11912119  T
Q  242 nnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 298  Q
           || ||| ||| |||||||| ||||||| ||||||||||||||||||||||    
T  11912120 cttttttcacaaactactttgacaagattatgaacaatacataaaagcttatttatt 11912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 41125849 - 41125766
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaa 217  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||   ||||  |||||| ||||| ||||| ||||||||||    
T  41125849 tttggattggcttatttttgagtttatgaaaaatagcttttgcaaatatataagcttttatgttaattcataagttctcactaa 41125766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 7565192 - 7565281
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 240  Q
    |||||||||||||||| ||||| |||  |  ||||| ||||||| ||| | |||||||||||||||| |||||||||| |||||||||||    
T  7565192 ttgagcttatgaaaaagagcttatgcggataaataagtttttatcttagttcataaattctcactaacgaaaattgtaccttcataagtt 7565281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 43268646 - 43268703
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  43268646 cataaactaccttgaccagcttattaataatacataaaagcttatttatttgcataag 43268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 26003157 - 26003069
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||||| ||| || |||  ||||| |||||||||||||  | ||  ||||||||| |||||||||||||||||||    
T  26003157 ttttgagcttatgaaaaataacttatgtaaataaataagtttttattttaatttacaagctctcactaacgaaaattgtatcttcataa 26003069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 41419628 - 41419531
Alignment:
Q  182 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataata 280  Q
    ||||| ||||||| |||||  |||| |||||||||| |||||||||||||||||||| ||       |||||| |||||||||||||||||||||||||    
T  41419628 aataagtttttatgttaattgataagttctcactaacgaaaattgtatcttcataagctg-ttttttcataaactaccttgacaagcttatgaataata 41419531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 300
Target Start/End: Original strand, 7364254 - 7364385
Alignment:
Q  168 agcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaag 267  Q
    ||||| ||||||  |||||  |||||| ||||| ||||| ||||||||||  || |||||||||||||||||||        ||||| |||||| |||||    
T  7364254 agcttatgcaaataaataagcttttatattaattcataagttctcactaacaaatattgtatcttcataagttgtttgttg-ataaactaccttaacaag 7364352  T
Q  268 cttatgaataatacataaaagcttatttatttg 300  Q
    ||||||||||||| ||| |||||||||| ||||    
T  7364353 cttatgaataataaatagaagcttatttttttg 7364385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 16722185 - 16722098
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||||| || |||  ||| || |||||| |||||  ||||| ||||||||| ||||| |||||||||||||    
T  16722185 tttgagcttatgaaaaatagcttatgtaaataaatcaacttttatcttaatttataaactctcactaacgaaaagtgtatcttcataa 16722098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 39154672 - 39154775
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| |||||||||| |||| ||| ||||||||||||| ||||||  |||||  |||| | ||||| ||||| |||||| |||| ||||||| ||||||    
T  39154672 tttggattggcttattattgaacttctgaaaaatagcttatgcaaataaataagcttttgtgttaattcataagttctcaataataaaaattgcatcttc 39154771  T
Q  234 ataa 237  Q
    ||||    
T  39154772 ataa 39154775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 42558634 - 42558693
Alignment:
Q  140 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaa 199  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||  |||||||||||    
T  42558634 ttggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttattttaa 42558693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 17128339 - 17128282
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||| |||| ||| |||||||||||||||||||||||||||||||| |||||    
T  17128339 cataaactactttgataagtttatgaataatacataaaagcttatttatttgcataag 17128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 9477494 - 9477410
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    |||||||||||||||| || || ||||||  ||||| ||||||| ||||| ||||| |||||| ||| |||||||||| ||||||    
T  9477494 ttgagcttatgaaaaagagtttatgcaaataaataagtttttatcttaattcataagttctcagtaacgaaaattgtaccttcat 9477410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 306
Target Start/End: Original strand, 2878587 - 2878758
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| ||||||||||||| ||||||||||||| |||||| || |||  |||||  |||||| |||||  | || || |||||||  |||||||||||||    
T  2878587 tttggattggcttattttttagcttatgaaaaaatagcttatgtaaataaataagcttttatgttaatttaaaagttttcactaacaaaaattgtatctt 2878686  T
Q  233 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    | |||  ||       ||||||  || ||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  2878687 c-taaactgttgttt-cataaaccacattgacaaacttatgaataatagataaaagcttatttatttgcataag 2878758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 3977536 - 3977485
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    |||||| |||||||||||||||||||||||| || ||||| |||||||||||    
T  3977536 cataaactaccttgacaagcttatgaataatgcacaaaagtttatttatttg 3977485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 7364075 - 7364182
Alignment:
Q  131 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 230  Q
    |||||||||||| |||||||||||||||||||||||| |||  || |||  | |||  |||||| ||||| ||||| |||||||||  ||  ||||||||    
T  7364075 ccatttgggttgacttatttttgagcttatgaaaaattgctcatgtaaataattaagcttttatgttaattcataacttctcactagcgagcattgtatc 7364174  T
Q  231 ttcataag 238  Q
     |||||||    
T  7364175 ctcataag 7364182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 20458485 - 20458572
Alignment:
Q  150 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    ||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| |||| || || ||||||||||| |||||||    
T  20458485 tttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgaccaacgaaaattgtattttcataa 20458572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 22573818 - 22573779
Alignment:
Q  130 cccatttgggttggcttatttttgagcttatgaaaaatag 169  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  22573818 cccatttggattggcttatttttgagcttatgaaaaatag 22573779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 35083414 - 35083323
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaatt 225  Q
    ||||| |||| ||||||||||| |||||| |||||| || ||||||  |||||  |||||| ||||| ||||| |||||||| |||||||||    
T  35083414 tttggattggtttatttttgagtttatgataaatagtttatgcaaataaataagcttttatgttaattcataagttctcactgatgaaaatt 35083323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 38461206 - 38461357
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaat--tctcactaatgaaaattgtatcttcataagttgnnnnn 246  Q
    |||| ||||||||||||||||||| || |||  ||||| |||||||||||||  |||| |  |||||||||  |||||| |||||||||||  ||         
T  38461206 ttttaagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagttctctcactaacaaaaattatatcttcataaactg-tttt 38461304  T
Q  247 nncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
      |||||| ||| || |||| ||||| ||||||||||||| ||||||||||||    
T  38461305 ttcataaaatacatttacaaacttataaataatacataaaggcttatttattt 38461357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 1943064 - 1943014
Alignment:
Q  256 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||||||||||| ||||||||||||| |||||||| ||| |||||    
T  1943064 taccttgacaagcttatggataatacataaaaacttatttacttgcataag 1943014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 2670237 - 2670132
Alignment:
Q  131 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 230  Q
    |||||||| |||  |||||||  |||||||||||| ||  || ||||||  ||||||||||||| ||| | |||||||||||||||| ||||||| |||     
T  2670237 ccatttggattgatttattttcaagcttatgaaaagtaatttatgcaaataaataaatttttatgttatt-cataaattctcactaacgaaaattatatt 2670139  T
Q  231 ttcataa 237  Q
    |||||||    
T  2670138 ttcataa 2670132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 11163193 - 11163291
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| |||||||||||||||||| ||||  || | ||||| ||||  |||||  |||||| ||||| ||||| ||| |||||| ||||||||||||||    
T  11163193 tttggattggcttatttttgagctaatgatgaacaacttttacaaataaataagcttttatgttaattcataagttcgcactaacgaaaattgtatctt 11163291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 11706812 - 11706994
Alignment:
Q  124 aaaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaa------taaatttttattttaatacataaattctcactaa 217  Q
    ||||| ||||||| | ||||||||||||| ||||||| ||||||||||| ||||||  ||      |||  || ||| || || ||||| ||||||  ||    
T  11706812 aaagggcccatttcgattggcttattttttagcttatcaaaaatagcttatgcaaataaataagcttaagcttctatgttcattcataagttctcaaaaa 11706911  T
Q  218 tg-aaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
     | ||||||||||||||||||||||       |||||| ||| |||||||| ||| |||| |||||||||||||||||||||||    
T  11706912 agaaaaattgtatcttcataagttg-tttcttcataaaatacattgacaagtttaggaatgatacataaaagcttatttatttg 11706994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 43265967 - 43266017
Alignment:
Q  250 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||| || ||| |||||||||||||| |||||||||||||||||||||||    
T  43265967 ataaactatcttaacaagcttatgaatgatacataaaagcttatttatttg 43266017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 589317 - 589221
Alignment:
Q  145 ttatttttgagcttatgaaaaatagcttttgcaaagtaataa-atttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 240  Q
    |||||||||||||||| ||||||||||| ||||||  |||||  ||||||| ||||| ||||| || ||||||   ||| || ||||||||||||||    
T  589317 ttatttttgagcttataaaaaatagcttatgcaaataaataagttttttatgttaattcataagttttcactatcaaaatttttatcttcataagtt 589221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 2670136 - 2670080
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| ||||||||||| |||||||||| |||||||||| || |||||||| ||||    
T  2670136 cataaactaccttgacaaacttatgaatagtacataaaagattgtttatttgcataa 2670080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 3520530 - 3520577
Alignment:
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  3520530 taaactaccttgacaagcttatgaataatac-taaaaggttatttattt 3520577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 11991352 - 11991316
Alignment:
Q  263 acaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||||||| ||||||||||||||||||||||||||    
T  11991352 acaagcttataaataatacataaaagcttatttattt 11991316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 27806091 - 27805987
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 232  Q
    ||||| |||||||| |||| ||||||| ||||| |||||| ||||||  |||||| |||||| |||||  |||| || |||||||  |||||||||||||    
T  27806091 tttggattggcttactttttagcttattaaaaaatagcttatgcaaataaataaacttttatgttaatttataagttttcactaacaaaaattgtatctt 27805992  T
Q  233 cataa 237  Q
     ||||    
T  27805991 tataa 27805987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 29136731 - 29136841
Alignment:
Q  130 cccatttgggttggcttatttttgagcttatgaaaaa--tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgt 227  Q
    ||||||||| ||| ||||||||| ||||||| |||||  ||| || ||||||  |||||  |||||| ||||| ||||| | ||||| || | |||||||    
T  29136731 cccatttggattgacttatttttcagcttataaaaaaaatagtttatgcaaataaataagcttttatgttaattcataagtcctcaccaacggaaattgt 29136830  T
Q  228 atcttcataag 238  Q
    |||||||||||    
T  29136831 atcttcataag 29136841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 7984155 - 7984109
Alignment:
Q  260 ttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||| |||||||||||||||||||| |||| ||||||| |||||    
T  7984155 ttgacaaacttatgaataatacataaaaacttagttatttgcataag 7984109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 11163294 - 11163344
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||||| ||||| ||||||||||||||| |||||||||| |||||| ||||    
T  11163294 cataaactacctcgacaagcttatgaatcatacataaaaacttattgattt 11163344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 17868115 - 17868181
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 200  Q
    ||||| ||||||||||||| |||||||| |||||||||| ||||||  |||||  |||||| |||||    
T  17868115 tttggattggcttattttttagcttatggaaaatagcttatgcaaataaataaccttttatgttaat 17868181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 17868201 - 17868259
Alignment:
Q  249 cataaattaccttgacaagcttat-gaataatacataaaagcttatttatttgaataag 306  Q
    |||||| |||||||||||||||||  ||||||||| ||||||||| ||||||| |||||    
T  17868201 cataaactaccttgacaagcttataaaataatacacaaaagcttacttatttgcataag 17868259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 6150437 - 6150400
Alignment:
Q  250 ataaattaccttgacaagcttatgaataatacataaaa 287  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  6150437 ataaactaccttgacaaacttatgaataatacataaaa 6150400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 13739404 - 13739359
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 179  Q
    ||||| |||||||||||||||| |||||||||||| ||| ||||||    
T  13739404 tttggattggcttatttttgagtttatgaaaaataacttatgcaaa 13739359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 25332263 - 25332320
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||| |||| ||||| ||||||| || || ||||||||||||| |||||    
T  25332263 cataaattaccttaacaaacttataaataatatattaatgcttatttatttgcataag 25332320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 6150966 - 6150863
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| || |||| ||||||||||||||||||||| ||| |||||| ||   || |||||| ||||| | ||| |||||| |||  |||||||||| |||    
T  6150966 tttggatttgcttctttttgagcttatgaaaaataacttatgcaaa-tagctaagttttatgttaattcgtaagttctcagtaacaaaaattgtatattc 6150868  T
Q  234 ataag 238  Q
    |||||    
T  6150867 ataag 6150863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 18602691 - 18602618
Alignment:
Q  221 aaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatt 294  Q
    ||||||||| |||||||||||       |||||  |||||| |||||||||||||||||| |||||| ||||||    
T  18602691 aaattgtatattcataagttgtttttttcataagctaccttaacaagcttatgaataataaataaaaacttatt 18602618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 26003058 - 26003002
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    |||||| || ||| |||| ||||| |||||||||||||| |||||||||||| ||||    
T  26003058 cataaaataacttaacaaacttataaataatacataaaaacttatttatttgcataa 26003002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 40152802 - 40152890
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||| ||||||||||| | ||| ||||||  |||||  |||||| ||||| ||||| ||||||  || ||||||| |||||||||||    
T  40152802 ttttgaacttatgaaaaacatcttatgcaaataaataatcttttatattaattcataagttctcaagaacgaaaattttatcttcataa 40152890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 134 - 306
Target Start/End: Complemental strand, 24922 - 24749
Alignment:
Q  134 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 233  Q
    ||||| ||| |||||||||||||||||||||| |||||| ||||||  ||||| ||||||| |||||  |||| |||||||||||||| ||||||||||     
T  24922 tttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttg 24823  T
Q  234 ataagttgnnnnnnncataaattacc--ttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    || || ||       |||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24822 attagctg-ttttttcataaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcataag 24749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 1218 - 1062
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||| ||||||||||||||| ||| ||||||  |||||  |||||| ||||   |||| ||||||||||||||| |||||||||||||||||            
T  1218 ttttaagcttatgaaaaataacttatgcaaataaataagcttttatattaaagtataagttctcactaatgaaatttgtatcttcataagtt-atttttc 1120  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||| |||| |||||| |||||| ||||||||||||||||||| |||||    
T  1119 cataaattaccttaacaatcttatggataataaataaaagcttatttatttgcataag 1062  T

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Target: scaffold0299 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 11227 - 11382
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 248  Q
    |||| ||||||||||||||| ||| |||||| ||||||  |||||| ||||   |||| |||||||||||||||  ||||||||||||||||            
T  11227 ttttaagcttatgaaaaataacttatgcaaa-taataagcttttatattaaagtataagttctcactaatgaaatatgtatcttcataagtt-atttttc 11324  T
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||| ||||||| ||| |||||| ||||||||||||||||||| |||||    
T  11325 cataaattaccttaacaagctaatggataataaataaaagcttatttatttgcataag 11382  T

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Target: scaffold0041 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 108978 - 109073
Alignment:
Q  207 attctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 305  Q
    ||||| ||||| ||||||||||||||||||||||        ||||||  |||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  108978 attcttactaacgaaaattgtatcttcataagtt---tttttcataaaccaccttgacaagcttatgagtaatacataaaggcttatttatttgcataa 109073  T

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Target: scaffold0041; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 109103 - 109145
Alignment:
Q  264 caagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||    
T  109103 caagcttatgaataatacatagaagtttatttatttgcataag 109145  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 97231 - 97288
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||| ||||||||| |||||||||||| ||||||| |||||||||||||| |||||    
T  97231 cataaactaccttgactagcttatgaatactacataatagcttatttatttgcataag 97288  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 178662 - 178504
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaa-tacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 247  Q
    ||||||||||||||||||||| || || |||  ||||| |||  ||||||| |  ||||  ||| ||||| |||||||||||||||||||  |           
T  178662 ttttgagcttatgaaaaatagtttatgtaaataaataattttaaattttaaatttataagctcttactaacgaaaattgtatcttcataaactatttttt 178563  T
Q  248 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
     |||||| |||||| | || ||||| ||||||||||||||||||||||||||| |||||    
T  178562 tcataaaataccttaagaaacttataaataatacataaaagcttatttatttgcataag 178504  T

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Target: scaffold0512 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 299
Target Start/End: Complemental strand, 4222 - 4076
Alignment:
Q  151 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 250  Q
    |||||||||||||||||||||| ||||||  ||| |  |||||| |||||  |||| ||| |||||| ||||||||||| | |||||| |        ||    
T  4222 ttgagcttatgaaaaatagcttatgcaaatcaatgagcttttatgttaatttataagttcccactaacgaaaattgtat-tacataagct-attttttca 4125  T
Q  251 taaattaccttgacaagcttatgaataatacataaaagcttatttattt 299  Q
    |||| || ||| |||||||||| |||||||||| |||||||||||||||    
T  4124 taaactatctttacaagcttataaataatacattaaagcttatttattt 4076  T

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Target: scaffold0332 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 14790 - 14828
Alignment:
Q  268 cttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  14790 cttatgaataatacataaaagcttatttatttgtataag 14828  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 24421 - 24470
Alignment:
Q  256 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  24421 taccttgacaagcttatgaataatacatacaagc-tatttatttgcataag 24470  T

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Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 43842 - 43892
Alignment:
Q  250 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 300  Q
    ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||    
T  43842 ataaactacctcgacaagcttttgaataatacataaaaacttatttatttg 43892  T

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Target: scaffold1130 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 2403 - 2325
Alignment:
Q  157 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 235  Q
    |||| ||||||||||| || |||  |||||  ||||||||||||  ||||| ||||  |||||||||||||||||||||    
T  2403 ttatcaaaaatagcttatgtaaataaataagattttattttaatttataaactctccttaatgaaaattgtatcttcat 2325  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 298
Target Start/End: Complemental strand, 227853 - 227718
Alignment:
Q  163 aaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttg 262  Q
    |||| ||||| ||||||| | |||  |||||| ||||| |||||  ||| ||||| ||||||||||| |||||||| ||       |||||| ||||||     
T  227853 aaaagagcttgtgcaaagaattaagcttttatgttaattcataagatcttactaacgaaaattgtatattcataagctgtttttttcataaactacctta 227754  T
Q  263 acaagcttatgaataatacataaaagcttatttatt 298  Q
    |||| ||||| |||| ||||| || |||||||||||    
T  227753 acaaacttataaatactacattaatgcttatttatt 227718  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 242572 - 242654
Alignment:
Q  155 gcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||||||||||||||||| || |||  ||||  |||||||||||||  ||||  |||| |||| |||||| ||||||||||||    
T  242572 gcttatgaaaaatagcttatgtaaataaataggtttttattttaatttataagctctcgctaacgaaaatcgtatcttcataa 242654  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 142400 - 142343
Alignment:
Q  249 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 306  Q
    |||||||||| || | |||  ||||||||||||||||||||| ||||||||| |||||    
T  142400 cataaattacattaataagtatatgaataatacataaaagctcatttatttgcataag 142343  T

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Target: scaffold0048 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 59427 - 59339
Alignment:
Q  149 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 237  Q
    |||| ||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  | ||| || |||| || ||||||||||||    
T  59427 ttttaagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctttcattagtgaatatcgtatcttcataa 59339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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