View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0243_high_37 (Length: 313)

Name: NF0243_high_37
Description: NF0243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0243_high_37
NF0243_high_37
[»] scaffold0010 (2 HSPs)
scaffold0010 (52-248)||(180716-180912)
scaffold0010 (83-188)||(39241-39346)
[»] scaffold0029 (2 HSPs)
scaffold0029 (54-248)||(93773-93967)
scaffold0029 (130-224)||(115817-115911)
[»] chr5 (10 HSPs)
chr5 (52-248)||(20824569-20824765)
chr5 (53-245)||(28891999-28892191)
chr5 (55-245)||(20779032-20779222)
chr5 (55-248)||(22465066-22465259)
chr5 (83-194)||(20345452-20345563)
chr5 (83-194)||(25851242-25851353)
chr5 (83-151)||(16258123-16258191)
chr5 (83-151)||(22591842-22591910)
chr5 (83-151)||(22595397-22595465)
chr5 (83-145)||(14884078-14884140)
[»] chr3 (17 HSPs)
chr3 (52-248)||(10417147-10417343)
chr3 (82-240)||(13317701-13317859)
chr3 (83-239)||(16831661-16831817)
chr3 (83-191)||(31941791-31941899)
chr3 (83-191)||(31692318-31692426)
chr3 (83-227)||(16384505-16384649)
chr3 (132-239)||(11949107-11949214)
chr3 (83-145)||(10408902-10408964)
chr3 (50-188)||(24190195-24190333)
chr3 (83-145)||(28757253-28757315)
chr3 (83-145)||(47126878-47126940)
chr3 (83-188)||(17189265-17189370)
chr3 (83-188)||(18131480-18131585)
chr3 (83-151)||(2037045-2037113)
chr3 (83-151)||(2040786-2040854)
chr3 (83-151)||(14039674-14039742)
chr3 (118-230)||(35983030-35983142)
[»] chr1 (11 HSPs)
chr1 (55-248)||(20853709-20853902)
chr1 (83-188)||(20832877-20832982)
chr1 (104-227)||(20074707-20074830)
chr1 (104-151)||(18273112-18273159)
chr1 (83-194)||(20297685-20297796)
chr1 (83-194)||(52989043-52989154)
chr1 (83-149)||(24096592-24096658)
chr1 (83-145)||(38909803-38909865)
chr1 (83-145)||(48426224-48426286)
chr1 (83-145)||(37680400-37680462)
chr1 (83-191)||(21961332-21961440)
[»] chr6 (13 HSPs)
chr6 (55-248)||(20010523-20010717)
chr6 (52-245)||(15462405-15462598)
chr6 (83-188)||(24515464-24515569)
chr6 (89-191)||(18797813-18797915)
chr6 (83-188)||(14376966-14377071)
chr6 (126-227)||(34642679-34642780)
chr6 (104-230)||(19486365-19486491)
chr6 (89-149)||(23081588-23081648)
chr6 (52-151)||(16813803-16813902)
chr6 (83-145)||(24367569-24367631)
chr6 (92-145)||(30678083-30678136)
chr6 (83-151)||(8720755-8720823)
chr6 (83-191)||(10465898-10466006)
[»] scaffold0605 (1 HSPs)
scaffold0605 (55-248)||(1511-1704)
[»] chr4 (9 HSPs)
chr4 (82-240)||(27903595-27903753)
chr4 (83-241)||(16150845-16151003)
chr4 (83-241)||(16154991-16155149)
chr4 (83-194)||(29450442-29450553)
chr4 (83-145)||(3261699-3261761)
chr4 (104-230)||(8708897-8709023)
chr4 (104-230)||(13879329-13879455)
chr4 (83-145)||(44658771-44658833)
chr4 (83-227)||(7357490-7357634)
[»] scaffold0034 (3 HSPs)
scaffold0034 (82-240)||(70611-70769)
scaffold0034 (106-188)||(11837-11919)
scaffold0034 (89-188)||(1866-1965)
[»] chr7 (13 HSPs)
chr7 (83-239)||(14283266-14283422)
chr7 (130-227)||(12712602-12712699)
chr7 (50-149)||(16947331-16947430)
chr7 (104-194)||(21755658-21755748)
chr7 (83-145)||(26091690-26091752)
chr7 (83-145)||(40924709-40924771)
chr7 (83-145)||(49155596-49155658)
chr7 (83-167)||(13676724-13676808)
chr7 (83-145)||(26115482-26115544)
chr7 (104-145)||(12203713-12203754)
chr7 (130-227)||(14144874-14144971)
chr7 (92-149)||(15627814-15627871)
chr7 (83-191)||(12459877-12459985)
[»] scaffold0235 (2 HSPs)
scaffold0235 (83-191)||(8370-8478)
scaffold0235 (83-191)||(18584-18692)
[»] scaffold0664 (1 HSPs)
scaffold0664 (83-238)||(7279-7434)
[»] chr2 (5 HSPs)
chr2 (50-188)||(19716429-19716567)
chr2 (50-188)||(19720992-19721130)
chr2 (83-191)||(23274483-23274591)
chr2 (104-151)||(21901467-21901514)
chr2 (48-151)||(28350805-28350908)
[»] scaffold0420 (1 HSPs)
scaffold0420 (83-188)||(8905-9010)
[»] scaffold0072 (1 HSPs)
scaffold0072 (106-191)||(54335-54420)
[»] scaffold0020 (1 HSPs)
scaffold0020 (83-188)||(98491-98596)
[»] chr8 (6 HSPs)
chr8 (130-239)||(22054140-22054249)
chr8 (104-195)||(16268593-16268684)
chr8 (83-194)||(22027628-22027739)
chr8 (104-230)||(6606838-6606964)
chr8 (83-145)||(28984282-28984344)
chr8 (104-145)||(20391457-20391498)
[»] scaffold0067 (3 HSPs)
scaffold0067 (89-188)||(49094-49193)
scaffold0067 (89-188)||(58128-58227)
scaffold0067 (89-188)||(64516-64615)
[»] scaffold0203 (1 HSPs)
scaffold0203 (89-239)||(768-918)
[»] scaffold0348 (1 HSPs)
scaffold0348 (130-239)||(4804-4913)
[»] scaffold0239 (1 HSPs)
scaffold0239 (83-239)||(9695-9851)
[»] scaffold0114 (1 HSPs)
scaffold0114 (83-239)||(40298-40454)
[»] scaffold0053 (1 HSPs)
scaffold0053 (89-241)||(65212-65364)
[»] scaffold0609 (1 HSPs)
scaffold0609 (104-230)||(1188-1314)
[»] scaffold0243 (1 HSPs)
scaffold0243 (83-145)||(9680-9742)
[»] scaffold0004 (1 HSPs)
scaffold0004 (104-230)||(200406-200532)
[»] scaffold0100 (1 HSPs)
scaffold0100 (92-149)||(16526-16583)
[»] scaffold0058 (1 HSPs)
scaffold0058 (83-188)||(22413-22518)
[»] scaffold0005 (1 HSPs)
scaffold0005 (83-240)||(263465-263622)
[»] scaffold0003 (1 HSPs)
scaffold0003 (83-240)||(203620-203777)
[»] scaffold0765 (1 HSPs)
scaffold0765 (83-227)||(6165-6309)
[»] scaffold0222 (2 HSPs)
scaffold0222 (83-191)||(21102-21210)
scaffold0222 (83-188)||(395-500)
[»] scaffold0509 (1 HSPs)
scaffold0509 (104-151)||(12156-12203)
[»] scaffold0180 (1 HSPs)
scaffold0180 (104-167)||(30942-31005)
[»] scaffold0118 (1 HSPs)
scaffold0118 (83-194)||(746-857)
[»] scaffold0076 (1 HSPs)
scaffold0076 (106-185)||(53354-53433)
[»] scaffold0276 (1 HSPs)
scaffold0276 (83-145)||(23831-23893)
[»] scaffold0041 (1 HSPs)
scaffold0041 (83-145)||(42069-42131)
[»] scaffold0023 (1 HSPs)
scaffold0023 (106-188)||(164332-164414)
[»] scaffold0054 (1 HSPs)
scaffold0054 (83-188)||(63427-63532)
[»] scaffold1426 (1 HSPs)
scaffold1426 (83-191)||(1515-1623)
[»] scaffold0317 (1 HSPs)
scaffold0317 (83-167)||(2943-3027)
[»] scaffold0046 (1 HSPs)
scaffold0046 (118-230)||(70357-70469)
[»] scaffold0108 (1 HSPs)
scaffold0108 (83-230)||(50354-50501)
[»] scaffold1845 (1 HSPs)
scaffold1845 (83-145)||(1212-1274)
[»] scaffold0993 (1 HSPs)
scaffold0993 (91-149)||(1312-1370)
[»] scaffold0751 (1 HSPs)
scaffold0751 (50-188)||(5472-5609)
[»] scaffold0310 (1 HSPs)
scaffold0310 (83-191)||(11265-11373)
[»] scaffold0001 (1 HSPs)
scaffold0001 (83-191)||(514261-514369)


Alignment Details
Target: scaffold0010 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 52 - 248
Target Start/End: Original strand, 180716 - 180912
Alignment:
Q  52 cagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  180716 cagagattgaatgatgagagaccacaaaaagggaaaaatgctcctgttgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 180815  T
Q  152 ctcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  180816 ctcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggctgattgcaagcgtggagatattgtttgttttaactgtggtgatga 180912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 39241 - 39346
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  ||||||| ||||| ||||||| ||| |||||||||||||||| |||   | ||||||||||||| || ||||| || ||    
T  39241 ggagagatgctcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtgg 39340  T
Q  183 tcagaa 188  Q
    ||||||    
T  39341 tcagaa 39346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 183; Significance: 5e-99; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 54 - 248
Target Start/End: Original strand, 93773 - 93967
Alignment:
Q  54 gagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcact 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  93773 gagattgaatgatgagagaccacaaaaagggaaaaatgctcctgttgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcact 93872  T
Q  154 caagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 248  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  93873 caagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 93967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 115911 - 115817
Alignment:
Q  130 ggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatat 224  Q
    |||||||| ||||||| ||| ||  ||||||||||||| || ||||| || || ||||||||||| ||||| || |||||||||||||| |||||    
T  115911 ggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaagcgtggtgatat 115817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 8e-98; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 52 - 248
Target Start/End: Complemental strand, 20824765 - 20824569
Alignment:
Q  52 cagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20824765 cagagattgaatgatgagagaccacaaaaagggaaaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 20824666  T
Q  152 ctcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 248  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  20824665 ctcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggtggactgcaagcgtggagatattgtttgttttaactgtggtgatga 20824569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 53 - 245
Target Start/End: Original strand, 28891999 - 28892191
Alignment:
Q  53 agagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcac 152  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28891999 agagattgaatgatgagagaccacaaaaagggaaaaatgcccctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcac 28892098  T
Q  153 tcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtga 245  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| ||||| || ||||||||||  ||||||||    
T  28892099 tcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggctgaatgcaagcggggagacatcgtttgttttagttgtggtga 28892191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 55 - 245
Target Start/End: Complemental strand, 20779222 - 20779032
Alignment:
Q  55 agattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactc 154  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20779222 agattgaatgatgagaggccacaaaaagggaaaaatgctcatgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcaccc 20779123  T
Q  155 aagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtga 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |  ||||||||||  ||||||||    
T  20779122 aagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggctgaatgcaagcgtggagacaacgtttgttttagttgtggtga 20779032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 55 - 248
Target Start/End: Complemental strand, 22465259 - 22465066
Alignment:
Q  55 agattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactc 154  Q
    ||||||||||||||||| |  |  || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |    
T  22465259 agattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttatttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcatcc 22465160  T
Q  155 aagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 248  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||| ||||| |||||    
T  22465159 aagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaagcgtggagatatcgtttgttttaattgtggcgatga 22465066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 20345563 - 20345452
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  ||||||||||||| ||||||| ||| | |||||||||||||| |||   | ||||||| | ||| || ||||| || ||    
T  20345563 ggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaagcccacaagagtaatgtttgtggtaaagatgataggaagtgcttcaggtgtgg 20345464  T
Q  183 tcagaagggtca 194  Q
    ||||||||||||    
T  20345463 tcagaagggtca 20345452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 25851353 - 25851242
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||| ||||||  ||||||| ||||| ||||||| ||| |||||||||||||||| |||   | ||||||| | ||| || ||||| || ||    
T  25851353 ggagagatgctcttgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgataggaagtgcttcaggtgtgg 25851254  T
Q  183 tcagaagggtca 194  Q
    ||||||||||||    
T  25851253 tcagaagggtca 25851242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 16258123 - 16258191
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||| ||| ||||| |||  ||||||| ||||| ||||||| |||||||||||||||||||| |||||    
T  16258123 ggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 16258191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 22591842 - 22591910
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||| ||| ||||| |||  ||||||| ||||| ||||||| |||||||||||||||||||| |||||    
T  22591842 ggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 22591910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 22595397 - 22595465
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||| ||| ||||| |||  ||||||| ||||| ||||||| |||||||||||||||||||| |||||    
T  22595397 ggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 22595465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 14884078 - 14884140
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| ||||||| | |||  ||||||||||||| ||||||| ||| ||||||||||||||||    
T  14884078 ggagagatgctccagctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatg 14884140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 8e-98; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 52 - 248
Target Start/End: Original strand, 10417147 - 10417343
Alignment:
Q  52 cagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    |||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10417147 cagagattgaatgatgagagaccacaaaaagggaaaaatgctcaagttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 10417246  T
Q  152 ctcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 248  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10417247 ctcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 10417343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 82 - 240
Target Start/End: Original strand, 13317701 - 13317859
Alignment:
Q  82 gggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcg 181  Q
    |||||| |||||||||||||||||||||||||||| |||||||  || |||||||| ||||||| ||||||  ||||||||||||| ||||||||||| |    
T  13317701 gggagagatgctcctgttgatgttgtttgttacaagtgtggtgcaaaaggccacaaaagtaatgtttgcaccaaagatgagaagaagtgtttcagatgtg 13317800  T
Q  182 gtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgt 240  Q
    |||| || |||||||| || ||||||||||||||||| ||| | ||||||| |||||||    
T  13317801 gtcaaaaaggtcatgttttagcggattgcaagcgtggggatgtggtttgttataactgt 13317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 16831661 - 16831817
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  | |||||||  || ||||| | ||| |||||||||||||||| ||| ||  | ||||||||||| || ||||| || ||    
T  16831661 ggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtgg 16831760  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactg 239  Q
    |||||||||||| ||||| ||||| ||||||||||| ||| |||| |||| ||||||    
T  16831761 tcagaagggtcacgtgttagcggactgcaagcgtggtgatgttgtatgttataactg 16831817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 31941899 - 31941791
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||||||||||||| |||  | ||||||||||| ||||| | ||| |||||||||||||||| ||| ||  ||||||||||||| |||||||| || ||    
T  31941899 ggagaaatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgtttcaggtgtgg 31941800  T
Q  183 tcagaaggg 191  Q
    |||||||||    
T  31941799 tcagaaggg 31941791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 31692318 - 31692426
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||||||||| ||| |||  | ||||||||||| ||||||| ||| |||||||||||||||| ||| ||  ||||||||||||| |||||||| || ||    
T  31692318 ggagaaatgcttctgctgagatcgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgtttcaggtgtgg 31692417  T
Q  183 tcagaaggg 191  Q
    | |||||||    
T  31692418 ttagaaggg 31692426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 16384505 - 16384649
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  | |||||||  || ||||| | ||| | |||||||||||| | ||| ||  | ||||||||||| || ||||| || ||    
T  16384505 ggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaagtccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtgg 16384604  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgt 227  Q
    ||||||||||||  ||||||| |||||||||||||| ||| ||||    
T  16384605 tcagaagggtcacatgttggctgattgcaagcgtggtgatgttgt 16384649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 11949107 - 11949214
Alignment:
Q  132 ccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgt 231  Q
    |||||||||||||| ||| ||| ||||||||||||| || |||||||| |||||||| || ||  | || || ||||| ||||| |||||| |||||||     
T  11949107 ccacaagagtaatgtttgtactaaagatgagaagaagtgcttcagatgtggtcagaaaggacacatattagctgattgtaagcggggagatgttgtttgc 11949206  T
Q  232 tttaactg 239  Q
    | ||||||    
T  11949207 tataactg 11949214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 10408964 - 10408902
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| ||||||| | |||  ||||||||||||||||||||| ||| ||||||||||||||||    
T  10408964 ggagagatgctccagctgagattgtttgttacaaatgtggtgagaaaggccacaagagtaatg 10408902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 24190333 - 24190195
Alignment:
Q  50 agcagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    ||||||||||||||||||||||     | ||  ||||| |||||||||||||| |||||||||  || ||||| | ||| |||||||| ||||| | |||    
T  24190333 agcagagattgaatgatgagaggaggtacaagaggagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaaagtaacgtttg 24190234  T
Q  150 cactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
     ||  ||||||||||||| || ||||| || ||||||||    
T  24190233 taccaaagatgagaagaagtgcttcaggtgtggtcagaa 24190195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 28757315 - 28757253
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  28757315 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 28757253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 47126940 - 47126878
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  47126940 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 47126878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 17189370 - 17189265
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||||||| |||||||||  || ||||| | ||| |||||||| ||||| | ||| ||  ||||||||||||| || ||||| || ||    
T  17189370 ggagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaaagtaacgtttgtaccaaagatgagaagaagtgcttcaggtgtgg 17189271  T
Q  183 tcagaa 188  Q
    ||||||    
T  17189270 tcagaa 17189265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 18131480 - 18131585
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||||||  ||| ||| ||||| ||||| | ||| |||||||||||||||| |||   | ||||||||||||| || ||||| || ||    
T  18131480 ggagagatgctcctgttgagattgattgctacaagtgtggcgagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtgg 18131579  T
Q  183 tcagaa 188  Q
    ||||||    
T  18131580 tcagaa 18131585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 2037045 - 2037113
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||| ||| ||||| |||  ||||||| ||||| ||||||| |||||||||||||||||||| |||||    
T  2037045 ggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 2037113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 2040786 - 2040854
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||| ||| ||||| |||  ||||||| ||||| ||||||| |||||||||||||||||||| |||||    
T  2040786 ggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 2040854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 14039742 - 14039674
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||| ||| ||||| |||  ||||||| ||||| ||||||| |||||||||||||||||||| |||||    
T  14039742 ggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 14039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 35983142 - 35983030
Alignment:
Q  118 tgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtg 217  Q
    ||||||| ||| ||||||||||||||||  ||    | |||||||||||| ||||||||||| || ||||| || ||    ||||| |||||||||||||    
T  35983142 tgtggtgagaaaggccacaagagtaatgtgtgtgaccgagatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtg 35983043  T
Q  218 gagatattgtttg 230  Q
    | |||||||||||    
T  35983042 gggatattgtttg 35983030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 55 - 248
Target Start/End: Original strand, 20853709 - 20853902
Alignment:
Q  55 agattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactc 154  Q
    ||||||||||||||||| |  |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20853709 agattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcaccc 20853808  T
Q  155 aagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 248  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||| ||||| |||||    
T  20853809 aagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaagcgtggagatatcgtttgttttaattgtggcgatga 20853902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 20832877 - 20832982
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||||||| ||||||| ||||| ||||| | ||| |||||||||||||||| ||| ||| ||||||||||||| |||||||| || ||    
T  20832877 ggagagatgctcctgttgatattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaattgtttcaggtgtgg 20832976  T
Q  183 tcagaa 188  Q
    ||||||    
T  20832977 tcagaa 20832982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 20074707 - 20074830
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggc 203  Q
    |||| |||||||| ||||||| ||| ||||||||||| |||| ||| | | ||||||||| ||| || ||||| || ||||||||||||||    |||||    
T  20074707 ttgtgtgttacaagtgtggtgagaaaggccacaagagcaatgtttgtagtaaagatgagaggaagtgcttcaggtgtggtcagaagggtcacagcttggc 20074806  T
Q  204 ggattgcaagcgtggagatattgt 227  Q
     || ||||||||||| ||||||||    
T  20074807 tgaatgcaagcgtggggatattgt 20074830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 18273159 - 18273112
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  18273159 ttgtttgttacaagtgtggtgagaagggccacaagagtaatgtttgca 18273112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 20297796 - 20297685
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  ||||||||||||| ||||||| |||  ||||||||||||||| |||   | ||||||||| ||| || ||||| || ||    
T  20297796 ggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaatgccacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggtgtgg 20297697  T
Q  183 tcagaagggtca 194  Q
    | ||||||||||    
T  20297696 ttagaagggtca 20297685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 52989154 - 52989043
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||  |||  ||||||||||||| |||||||  || ||||||||||| |||| |||   | ||||||||| ||| |||||||| || ||    
T  52989154 ggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgtttcaggtgtgg 52989055  T
Q  183 tcagaagggtca 194  Q
    ||||||||||||    
T  52989054 tcagaagggtca 52989043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 24096592 - 24096658
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    ||||| |||||||||||||  ||||||||| ||| |||||||  || ||||||||||||||||||||    
T  24096592 ggagagatgctcctgttgagattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttg 24096658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 38909803 - 38909865
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  38909803 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 38909865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 48426286 - 48426224
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  48426286 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 48426224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 37680462 - 37680400
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| || ||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  37680462 ggagagatactcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 37680400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 21961440 - 21961332
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||  |||  ||||||||||||| |||||||  || ||||||||||| |||| |||   | ||||||||| ||| || ||||| || ||    
T  21961440 ggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgcttcaggtgtgg 21961341  T
Q  183 tcagaaggg 191  Q
    |||||||||    
T  21961340 tcagaaggg 21961332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 6e-68; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 55 - 248
Target Start/End: Original strand, 20010523 - 20010717
Alignment:
Q  55 agattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgt-ttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcact 153  Q
    ||||||||||||||||| |  |  || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  20010523 agattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtattgttacaaatgtggtgtgaagggccacaagagtaatgcttgcacc 20010622  T
Q  154 caagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 248  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||| || ||||| |||||    
T  20010623 caagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaagcgtggagatatcgtttgtttcaattgtggcgatga 20010717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 52 - 245
Target Start/End: Complemental strand, 15462598 - 15462405
Alignment:
Q  52 cagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    |||||||||||||||||||| |  |  | ||||||| |  |||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||  ||||    
T  15462598 cagagattgaatgatgagaggcagcctagagggagagagactcctgttgatgttgtgtgttacaagtgtggtgcgaaaggccacaagagtaatgtctgca 15462499  T
Q  152 ctcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtga 245  Q
    |   ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||| || |||| ||||||||||||    
T  15462498 ccagagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggctgagtgcaagcggggagatatcgtgtgttataactgtggtga 15462405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 24515464 - 24515569
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||||||| |||||||||| || ||||||| ||| |||||||||||||||| ||| ||| ||||||||||||| |||||||| || ||    
T  24515464 ggagagatgctcctgttgatattgtttgttataagtgtggtgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtgg 24515563  T
Q  183 tcagaa 188  Q
    ||||||    
T  24515564 tcagaa 24515569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 18797915 - 18797813
Alignment:
Q  89 atgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
    |||||||||| ||| |||||||||| || ||||| | ||| |||||||||||||||| ||||||| |||||||| ||||||||||||| || ||||||||    
T  18797915 atgctcctgtggatattgtttgttataagtgtggcgagaaaggccacaagagtaatgtttgcactaaagatgagcagaaatgtttcaggtgtggtcagaa 18797816  T
Q  189 ggg 191  Q
    |||    
T  18797815 ggg 18797813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 14376966 - 14377071
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||||||||||||||| ||||| || |||| ||| |||||||||||||||| ||| ||| ||||||||||||| || ||||| || ||    
T  14376966 ggagagatgctcctgttgatgttgtttgctacaagtgcggtgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtgg 14377065  T
Q  183 tcagaa 188  Q
    ||||||    
T  14377066 tcagaa 14377071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 34642679 - 34642780
Alignment:
Q  126 gaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatatt 225  Q
    |||||||||||| ||||||| ||| ||  ||||||||||||| || ||||| || || ||||||||||| ||||| || ||||| || ||||| ||||||    
T  34642679 gaagggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgtaaacgtggtgatatt 34642778  T
Q  226 gt 227  Q
    ||    
T  34642779 gt 34642780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 19486365 - 19486491
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggc 203  Q
    ||||||| ||||| ||||||| |||||||||||||||||||| ||||| |   ||||||||||| || ||| |||| ||  |||| || |||  | | ||    
T  19486365 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgatgagaagaagtgcttccgatgtgggaagaaagggcatacgatagc 19486464  T
Q  204 ggattgcaagcgtggagatattgtttg 230  Q
    ||| ||||||| ||| |||||||||||    
T  19486465 ggaatgcaagcatggtgatattgtttg 19486491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 23081648 - 23081588
Alignment:
Q  89 atgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    |||||||||||||  |||||||||| |  ||||||| ||| ||||||||||||||||||||    
T  23081648 atgctcctgttgagattgtttgttatacttgtggtgagaaaggccacaagagtaatgcttg 23081588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 151
Target Start/End: Complemental strand, 16813902 - 16813803
Alignment:
Q  52 cagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||||||||||||||||||   ||  ||  ||||| ||| ||||| |||  ||||||| ||||| ||||||| ||| |||||||||||||||| |||||    
T  16813902 cagagattgaatgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgca 16813803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 24367631 - 24367569
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||| ||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  24367631 ggagagatgctcatgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 24367569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 30678083 - 30678136
Alignment:
Q  92 ctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    |||||| ||| |||||||| ||||| ||||||| |||| |||||||||||||||    
T  30678083 ctcctgctgaggttgtttgctacaagtgtggtgagaagagccacaagagtaatg 30678136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 8720755 - 8720823
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||| ||| ||||| |||  ||||||| ||||| ||||||| ||| |||||||||||||||| |||||    
T  8720755 ggagagatgatcctgatgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgca 8720823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 10465898 - 10466006
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||| ||||| |||  |||| |||||||| |||||||  || ||||||||||| ||||||||   |  |||||||| ||||||||| || || ||    
T  10465898 ggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatgagaggaaatgttttaggtgtgg 10465997  T
Q  183 tcagaaggg 191  Q
    |||||||||    
T  10465998 tcagaaggg 10466006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 55 - 248
Target Start/End: Complemental strand, 1704 - 1511
Alignment:
Q  55 agattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactc 154  Q
    ||||||||||||||||| |  |  || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  1704 agattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaaatgtggtgttaagggccacaagagtaatgcttgcaccc 1605  T
Q  155 aagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatga 248  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||| || ||||||| ||||||||| ||||||||||| ||||| |||||    
T  1604 aagatgagaagaaatgtttcagatgcggtcagaatggtcatttgttggctgaatgcaagcttggagatatcgtttgttttaattgtggcgatga 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 82 - 240
Target Start/End: Complemental strand, 27903753 - 27903595
Alignment:
Q  82 gggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcg 181  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||  |||||  ||||||||||||| ||||||||||| |    
T  27903753 gggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggccacaagagtaatgtctgcaccaaagatgagaagaagtgtttcagatgtg 27903654  T
Q  182 gtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgt 240  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||    
T  27903653 gtcagaaaggtcatgtgttggctgaatgcaagcgtggagatattgtttgttataactgt 27903595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 16151003 - 16150845
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||||||| ||||||| || || ||||| | ||| |||||||||||||||| ||| ||| ||||||||||||| || ||||| || ||    
T  16151003 ggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtgg 16150904  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtg 241  Q
    |||||| || ||     | || |||||||||||||| ||| ||||||| | ||||||||    
T  16150903 tcagaaaggacacacactagctgattgcaagcgtggtgatgttgtttgctataactgtg 16150845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 241
Target Start/End: Complemental strand, 16155149 - 16154991
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||||||| ||||||| || || ||||| | ||| |||||||||||||||| ||| ||| ||||||||||||| || ||||| || ||    
T  16155149 ggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtgg 16155050  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtg 241  Q
    |||||| || ||     | || |||||||||||||| ||| ||||||| | ||||||||    
T  16155049 tcagaaaggacacacactagctgattgcaagcgtggtgatgttgtttgctataactgtg 16154991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 29450442 - 29450553
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| |||||||||||||||| |||      |||||| | ||| |||||||| || ||    
T  29450442 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaggagatgataggaagtgtttcaggtgtgg 29450541  T
Q  183 tcagaagggtca 194  Q
    ||||||||||||    
T  29450542 tcagaagggtca 29450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 3261699 - 3261761
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  3261699 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 3261761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 8709023 - 8708897
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggc 203  Q
    ||||||| ||||| ||||||| |||||||||||||||||||| ||||| |   ||||| ||||| || ||| |||| ||  |||| || |||  | | ||    
T  8709023 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgatgaaaagaagtgcttccgatgtgggaagaaagggcatacgatagc 8708924  T
Q  204 ggattgcaagcgtggagatattgtttg 230  Q
    ||| ||||||||||| |||||||||||    
T  8708923 ggaatgcaagcgtggtgatattgtttg 8708897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 13879455 - 13879329
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggc 203  Q
    ||||||||||||| ||||||| ||||||||||||||||||||  |||| | | || |||||||| || ||| |||| ||  ||||||| |||  | | ||    
T  13879455 ttgtttgttacaagtgtggtgagaagggccacaagagtaatgtatgcaatgatgaggagaagaagtgcttccgatgtggaaagaagggccatacgatagc 13879356  T
Q  204 ggattgcaagcgtggagatattgtttg 230  Q
     || |||||||||||  ||||||||||    
T  13879355 tgaatgcaagcgtggtcatattgtttg 13879329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 44658771 - 44658833
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  44658771 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 44658833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 7357634 - 7357490
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  |||||||||||||  |||||| ||| ||||||||||| |||| ||    | ||||||||| ||| || ||||| || ||    
T  7357634 ggagagatgctcctgctgagattgtttgttacaagagtggtgagaaaggccacaagagcaatgtttatggtaaagatgagaggaagtgcttcaggtgtgg 7357535  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgt 227  Q
    ||||||||||||    || || || |||||||||||||| |||||    
T  7357534 tcagaagggtcacaatttagctgaatgcaagcgtggagacattgt 7357490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 99; Significance: 7e-49; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 82 - 240
Target Start/End: Complemental strand, 70769 - 70611
Alignment:
Q  82 gggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcg 181  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||  |||||  ||||||||||||| |||||||||||||    
T  70769 gggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggccacaagggtaatgtctgcaccaaagatgagaagaagtgtttcagatgcg 70670  T
Q  182 gtcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgt 240  Q
    |||| || |||||||||||||| || ||||||||||||||||||||||||| |||||||    
T  70669 gtcataaaggtcatgtgttggctgaatgcaagcgtggagatattgtttgttataactgt 70611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 11837 - 11919
Alignment:
Q  106 gtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
    ||||||||||| ||||| | ||| |||||||||||||||| ||| ||| ||||||||||||| || ||||| || ||||||||    
T  11837 gtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaa 11919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 1866 - 1965
Alignment:
Q  89 atgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
    ||||||||| |||  ||||||| ||||| ||||||| ||| |||||||||||||||| |||   | ||||||||||||| || ||||| || ||||||||    
T  1866 atgctcctgctgaaattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaa 1965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 14283266 - 14283422
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| ||| |||||||||||||| ||||| | ||| |||||||||||||||| ||| ||  | ||||||||||| || ||||| || ||    
T  14283266 ggagagatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtgg 14283365  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactg 239  Q
    ||||||||||||    || || |||||||||||||| ||| |||| |||| ||||||    
T  14283366 tcagaagggtcacacattagctgattgcaagcgtggtgatgttgtatgttataactg 14283422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 12712602 - 12712699
Alignment:
Q  130 ggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgt 227  Q
    |||||||| ||||||| ||| ||  ||||||||||||| || ||||| || || ||||||||||| ||||| || |||||||| ||||| ||||||||    
T  12712602 ggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaaacgtggtgatattgt 12712699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 16947331 - 16947430
Alignment:
Q  50 agcagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    |||||||| ||||||||||||||   |  ||  ||||| ||||||| |||||  ||||||||||||| |||||||  || ||||||||||||||||||||    
T  16947331 agcagagaatgaatgatgagagaaggcccaagaggagagatgctccagttgaaattgtttgttacaagtgtggtgaaaaaggccacaagagtaatgcttg 16947430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 21755748 - 21755658
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtca 194  Q
    ||||||||||||| |||||||  || ||||||||||| |||| |||   | ||||||||| ||| |||||||| || ||||||||||||||    
T  21755748 ttgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgtttcaggtgtggtcagaagggtca 21755658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 26091690 - 26091752
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  26091690 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 26091752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 40924709 - 40924771
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  40924709 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 40924771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 49155658 - 49155596
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  49155658 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 49155596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 13676808 - 13676724
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaa 167  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||  ||| |||||||||||||||| |||   | |||||||||||||    
T  13676808 ggagagatgctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaa 13676724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 26115482 - 26115544
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| ||||||| | |||  ||||||||||||| ||||||| ||| ||||||||||||||||    
T  26115482 ggagagatgctccggctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatg 26115544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 12203713 - 12203754
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||    
T  12203713 ttgtttgctacaagtgtggtgagaagggccacaagagtaatg 12203754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 14144971 - 14144874
Alignment:
Q  130 ggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgt 227  Q
    |||||||||||||| | ||| ||  | || |||||||| || ||||| || ||||| |||||||| ||||| || |||||||||||||| ||| ||||    
T  14144971 ggccacaagagtaacgtttgtaccaaggaggagaagaagtgcttcaggtgtggtcaaaagggtcacgtgttagctgattgcaagcgtggtgatgttgt 14144874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 15627871 - 15627814
Alignment:
Q  92 ctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    |||||| ||| |||||||| ||||| ||||||| ||| |||||||||||||| |||||    
T  15627871 ctcctgctgaagttgtttgctacaactgtggtgagaaaggccacaagagtaacgcttg 15627814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 12459985 - 12459877
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||| ||||| |||  |||| |||||||| |||||||  || ||||||||||| ||||||||   |  |||||||| ||||||||| || || ||    
T  12459985 ggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatgagaggaaatgttttaggtgtgg 12459886  T
Q  183 tcagaaggg 191  Q
    |||||||||    
T  12459885 tcagaaggg 12459877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 8370 - 8478
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||| ||||||| |||||||||| || ||||| | ||| |||||||||||||||| ||| ||| | ||||||||||| |||||||| || ||    
T  8370 ggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtactaaggatgagaagaagtgtttcaggtgtgg 8469  T
Q  183 tcagaaggg 191  Q
    |||||||||    
T  8470 tcagaaggg 8478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 18584 - 18692
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||| ||||||| |||||||||| || ||||| | ||| |||||||||||||||| ||| ||| | ||||||||||| |||||||| || ||    
T  18584 ggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtactaaggatgagaagaagtgtttcaggtgtgg 18683  T
Q  183 tcagaaggg 191  Q
    |||||||||    
T  18684 tcagaaggg 18692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 7434 - 7279
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  ||||||||||||| ||||| | ||| |||||||||||||||| ||| ||| ||||||||||||| || ||||| || ||    
T  7434 ggagagatgctcctgctgagattgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtgg 7335  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaact 238  Q
    |||||| || ||     | || |||||||||||||| ||| ||||||||| |||||    
T  7334 tcagaaaggacacactctagctgattgcaagcgtggtgatgttgtttgttataact 7279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 19716429 - 19716567
Alignment:
Q  50 agcagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    ||||||||||||||||||||||    |  ||  ||||| ||||||||| |||  | ||||||||||| ||||| | ||| |||||||||||||||| |||    
T  19716429 agcagagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttg 19716528  T
Q  150 cactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
     ||| ||||||||||||| |||||||| || ||||||||    
T  19716529 tactaaagatgagaagaagtgtttcaggtgtggtcagaa 19716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 19720992 - 19721130
Alignment:
Q  50 agcagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    ||||||||||||||||||||||    |  ||  ||||| ||||||||| |||  | ||||||||||| ||||| | ||| |||||||||||||||| |||    
T  19720992 agcagagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttg 19721091  T
Q  150 cactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
     ||| ||||||||||||| |||||||| || ||||||||    
T  19721092 tactaaagatgagaagaagtgtttcaggtgtggtcagaa 19721130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 23274591 - 23274483
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||  |||  |||||||  |||| ||||||| ||| |||||||||||||||| ||| ||| ||||||||||||| || ||||| || ||    
T  23274591 ggagagatgctcctactgaaattgtttgcaacaagtgtggtgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtgg 23274492  T
Q  183 tcagaaggg 191  Q
     ||||||||    
T  23274491 acagaaggg 23274483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 21901514 - 21901467
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||||| ||||| ||||||| |||||||||||||||||||| |||||    
T  21901514 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 21901467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 28350908 - 28350805
Alignment:
Q  48 ggagcagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgct 147  Q
    |||||| |||||||||||||||||   ||  ||  ||||| ||| ||||| |||  ||||||| ||||| ||||||| ||| |||||||||||||||| |    
T  28350908 ggagcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtt 28350809  T
Q  148 tgca 151  Q
    ||||    
T  28350808 tgca 28350805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 9010 - 8905
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  |||||||||| || ||||| | ||| |||||||||||||||| ||| ||| ||||||||||||| |||||||| || ||    
T  9010 ggagagatgctcctgatgagattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtgg 8911  T
Q  183 tcagaa 188  Q
    ||||||    
T  8910 tcagaa 8905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 54420 - 54335
Alignment:
Q  106 gtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaggg 191  Q
    ||||||||||| ||||| | ||| |||||||||||||||| ||| ||| ||||||||||||| |||||||| || |||||||||||    
T  54420 gtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaggg 54335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 98491 - 98596
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  | ||||||||||| ||||| | ||| |||||||||||||||| ||| ||| ||||||||||||| |||||||| || ||    
T  98491 ggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtgg 98590  T
Q  183 tcagaa 188  Q
    ||||||    
T  98591 tcagaa 98596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 22054249 - 22054140
Alignment:
Q  130 ggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgttt 229  Q
    |||||||||||||||| ||| ||  | ||||||||||| || |||||||| ||||||||||||||  | || ||||||||||||||||| ||| |||| |    
T  22054249 ggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcagatgtggtcagaagggtcaccttttagcggattgcaagcgtggtgatgttgtat 22054150  T
Q  230 gttttaactg 239  Q
    ||| ||||||    
T  22054149 gttataactg 22054140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 16268593 - 16268684
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcat 195  Q
    ||||||||||||| ||||||| ||| |||||||||||||||| |||   | ||||||||| ||| || ||||| || |||||||||||||||    
T  16268593 ttgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggtgtggtcagaagggtcat 16268684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 22027628 - 22027739
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  | ||||||||||| ||||| |  || |||||||||||||||| ||| ||  ||||||||||||| || ||||| || ||    
T  22027628 ggagagatgctcctgctgagatagtttgttacaagtgtggcgataaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtgg 22027727  T
Q  183 tcagaagggtca 194  Q
    ||||||||||||    
T  22027728 tcagaagggtca 22027739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 6606838 - 6606964
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggc 203  Q
    ||||||| ||||| ||||||| |||||||||||||||||||| ||||| |   || |||||||| || ||| |||| ||  ||||||| |||  | | ||    
T  6606838 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagc 6606937  T
Q  204 ggattgcaagcgtggagatattgtttg 230  Q
     || ||||||||||| |||||||||||    
T  6606938 tgaatgcaagcgtggggatattgtttg 6606964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 28984344 - 28984282
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| ||||||| |||||  ||||||||||||| ||||||| ||| ||||||||||||||||    
T  28984344 ggagagatgctccagttgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatg 28984282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 20391498 - 20391457
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||    
T  20391498 ttgtttgctacaagtgtggtgagaagggccacaagagtaatg 20391457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 49094 - 49193
Alignment:
Q  89 atgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
    ||||||||| |||  | ||||||||||| ||||| | |||||||||||||||||||| ||| ||  | |||||||||||||||||||| || ||||||||    
T  49094 atgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcagaa 49193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 58128 - 58227
Alignment:
Q  89 atgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
    ||||||||| |||  | ||||||||||| ||||| | |||||||||||||||||||| ||| ||  | |||||||||||||||||||| || ||||||||    
T  58128 atgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcagaa 58227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 64516 - 64615
Alignment:
Q  89 atgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
    ||||||||| |||  | ||||||||||| ||||| | ||| |||||||||||||||| ||| ||  | |||||||||||||||||||| || ||||||||    
T  64516 atgctcctgctgagatagtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaaatgtttcaggtgtggtcagaa 64615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 239
Target Start/End: Original strand, 768 - 918
Alignment:
Q  89 atgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
    ||||||||| |||  ||||||||||||| |||||   ||| ||||| |||||||||| ||| ||| ||||||||||||| || ||||| || ||||||||    
T  768 atgctcctgctgagattgtttgttacaagtgtggcaagaaaggccataagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaa 867  T
Q  189 gggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactg 239  Q
     || ||     | || |||||||||||||| ||||||||||||| ||||||    
T  868 aggacacactctagctgattgcaagcgtggtgatattgtttgttataactg 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 4804 - 4913
Alignment:
Q  130 ggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtggagatattgttt 229  Q
    |||||||||||||||| ||| ||  ||||||||||||| || ||||| || || |||||||||||  |||| || |||||||||||||| ||| |||| |    
T  4804 ggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacatgttagctgattgcaagcgtggtgatgttgtat 4903  T
Q  230 gttttaactg 239  Q
    ||| ||||||    
T  4904 gttataactg 4913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 9695 - 9851
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  | |||||||  || ||||| | ||| |||||||||||||||| ||| ||  | ||||||||||| || ||||| || ||    
T  9695 ggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtgg 9794  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactg 239  Q
    | ||||||||||  | || ||||||||||||||||| ||| |||| |||| ||||||    
T  9795 ttagaagggtcaccttttagcggattgcaagcgtggtgatgttgtatgttataactg 9851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 40454 - 40298
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  | || ||||| || ||||| | ||| |||||||||||||||| ||| ||  ||||||| ||||| || ||||| || ||    
T  40454 ggagagatgctcctgctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgataagaagtgcttcaggtgtgg 40355  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactg 239  Q
    | ||||||||||  |||| ||||||||||||||| | ||| |||| |||| ||||||    
T  40354 ttagaagggtcacatgttagcggattgcaagcgttgtgatgttgtatgttataactg 40298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 241
Target Start/End: Original strand, 65212 - 65364
Alignment:
Q  89 atgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
    ||||||||| ||| |||||||||||||| ||||| | ||| |||||||||||||||| ||| ||  |||||||||| || || ||||| || ||||||||    
T  65212 atgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaaaaagtgcttcaggtgtggtcagaa 65311  T
Q  189 gggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgtg 241  Q
     || ||   ||||||  |||| ||| | |||||| ||||||||| ||| ||||    
T  65312 aggacacacgttggctaattgtaagagaggagatgttgtttgttataattgtg 65364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 1314 - 1188
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggc 203  Q
    ||||||||||||| ||||||| |||||||||||||||||||| ||||| |   || |||||||| || ||| |||| ||  ||||||| |||  | | ||    
T  1314 ttgtttgttacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagc 1215  T
Q  204 ggattgcaagcgtggagatattgtttg 230  Q
     || ||||||||||| |||||||||||    
T  1214 tgaatgcaagcgtggtgatattgtttg 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 9680 - 9742
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| ||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||||||||    
T  9680 ggagagatgctcctgctgatattgtttgctacaagtgtggtgagaagggccacaagagtaatg 9742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 200406 - 200532
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggc 203  Q
    ||||||| ||||| ||||||| |||||||||||||||||||| ||||| |   ||||||||||| || ||| |||| ||  |||| || |||  | | ||    
T  200406 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgatgagaagaagtgcttccgatgtgggaagaaagggcatacgatagc 200505  T
Q  204 ggattgcaagcgtggagatattgtttg 230  Q
    ||| ||||||||||| |||||||||||    
T  200506 ggaatgcaagcgtggtgatattgtttg 200532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 16526 - 16583
Alignment:
Q  92 ctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    |||||| ||| |||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  16526 ctcctgctgaggttgtttgctacaagtgtggtgagaagggccacaagagtaatgcttg 16583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 22518 - 22413
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||||||  | ||||||||||| ||||| | ||| |||||||||||||||| ||  ||| | |||||||||||||| ||||  || ||    
T  22518 ggagagatgctcctgttgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttttactaaggatgagaagaaatgcttcaagtgtgg 22419  T
Q  183 tcagaa 188  Q
    ||||||    
T  22418 tcagaa 22413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 263622 - 263465
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  | |||||||  || ||||| | ||| |||||||||||||||| ||| ||  | ||||||||||| || ||||| || ||    
T  263622 ggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtgg 263523  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgt 240  Q
    ||||||||||||  | || ||||||||||||  ||| ||| |||| |||| |||||||    
T  263522 tcagaagggtcaccttttagcggattgcaaggatggtgatgttgtatgttataactgt 263465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 240
Target Start/End: Complemental strand, 203777 - 203620
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  | |||||||  || ||||| | ||| |||||||||||||||| ||| ||  | ||||||||||| || ||||| || ||    
T  203777 ggagagatgctcctggtgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatgagaagaagtgcttcaggtgtgg 203678  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttgttttaactgt 240  Q
    ||||||||||||  | || ||||||||||||  ||| ||| |||| |||| |||||||    
T  203677 tcagaagggtcaccttttagcggattgcaaggatggtgatgttgtatgttataactgt 203620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 6165 - 6309
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| |||||||||| ||  | |||||||  || ||||| | ||| |||||||||||||| | ||| ||  | ||||||||||| || ||||| || ||    
T  6165 ggagagatgctcctgtcgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtaccaaggatgagaagaagtgcttcaggtgtgg 6264  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgt 227  Q
    |||||||||||| ||| | || ||||| |||||||| ||||||||    
T  6265 tcagaagggtcacgtgctagctgattgtaagcgtggcgatattgt 6309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 21210 - 21102
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||| ||| |||  ||||||| ||||| ||||||| ||| |||||||||||||||| ||| ||| ||| ||||||||| || ||||| || ||    
T  21210 ggagagatgcttctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtactaaaggtgagaagaagtgcttcaggtgtgg 21111  T
Q  183 tcagaaggg 191  Q
     ||||||||    
T  21110 acagaaggg 21102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 395 - 500
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||| |||  | |||||||||||||||||   ||| |||||||||||| ||| ||| ||  | ||||||||||| |||||||| || ||    
T  395 ggagagatgctcctgctgagatcgtttgttacaaatgtggcaggaaaggccacaagagtgatgtttgtaccaaggatgagaagaagtgtttcaggtgtgg 494  T
Q  183 tcagaa 188  Q
    ||||||    
T  495 tcagaa 500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 12203 - 12156
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgca 151  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  12203 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgcttgca 12156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 30942 - 31005
Alignment:
Q  104 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaa 167  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||| |   |||||||||||    
T  30942 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgcttgcaatggtgatgagaagaa 31005  T

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Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 857 - 746
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||  |||  ||||||||||||| |||||||  || ||||||||||| |||| |||   | ||||||||| ||| || ||||| |||||    
T  857 ggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgcttcaggtgcgg 758  T
Q  183 tcagaagggtca 194  Q
    ||||||||||||    
T  757 tcagaagggtca 746  T

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Target: scaffold0076 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 53354 - 53433
Alignment:
Q  106 gtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtca 185  Q
    ||||||||||| ||||| | ||| |||||||||||||||| ||| ||| | |||||||||||||| ||||| || |||||    
T  53354 gtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaggatgagaagaaatgattcaggtgtggtca 53433  T

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Target: scaffold0276 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 23831 - 23893
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  23831 ggagagatgctcctgttgagattgtttgatacaagtgtggtgagaaaggccacaagagtaatg 23893  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 42131 - 42069
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||||||||    
T  42131 ggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatg 42069  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 164332 - 164414
Alignment:
Q  106 gtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
    ||||||||||| ||||| | ||| |||||||||||||||| |||  || | ||||||||||| |||||||| || ||||||||    
T  164332 gtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgttctaaggatgagaagaagtgtttcaggtgtggtcagaa 164414  T

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Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 63427 - 63532
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||  |||| ||||||||| ||| |||||||  || |||||||||||||||| |||    | |||||||||||| |||||||| || ||    
T  63427 ggagagatgctcctactgatattgtttgtttcaagtgtggtgataaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgtttcaggtgtgg 63526  T
Q  183 tcagaa 188  Q
    ||||||    
T  63527 tcagaa 63532  T

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Target: scaffold1426 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 1515 - 1623
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||  |||  ||||||||||||| ||||||| ||| || ||||||||||||| |||   | ||||||||| ||| || ||||| || ||    
T  1515 ggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggacacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggtgtgg 1614  T
Q  183 tcagaaggg 191  Q
    |||||||||    
T  1615 tcagaaggg 1623  T

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Target: scaffold0317 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 3027 - 2943
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaa 167  Q
    ||||| |||||||||||||  ||||||| ||||| ||||||  ||| |||||||||||||||| |||   | |||||||||||||    
T  3027 ggagagatgctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaa 2943  T

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Target: scaffold0046 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 70469 - 70357
Alignment:
Q  118 tgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggcggattgcaagcgtg 217  Q
    ||||||| ||| ||||||||||||||||  ||    | |||||||||||| ||||||||||| || ||||| || ||    ||||| |||||||||||||    
T  70469 tgtggtgagaaaggccacaagagtaatgtgtgtgaccgagatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtg 70370  T
Q  218 gagatattgtttg 230  Q
    | |||||||||||    
T  70369 gggatattgtttg 70357  T

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Target: scaffold0108 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 50501 - 50354
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||  |||| ||||||||| ||| |||||||  || | |||||||||||||| |||    | |||||||||||| |||||||| || ||    
T  50501 ggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaagaccacaagagtaatgtttgtgaccgagatgagaagaagtgtttcaggtgtgg 50402  T
Q  183 tcagaagggtcatgtgttggcggattgcaagcgtggagatattgtttg 230  Q
    |||||| || ||    || || ||||| |||||||| |||||||||||    
T  50401 tcagaaaggacacaccttagctgattgtaagcgtggggatattgtttg 50354  T

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Target: scaffold1845 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 1212 - 1274
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 145  Q
    ||||| ||||||||| |||  ||||||||||||| ||||||| ||| ||||||||||| ||||    
T  1212 ggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatg 1274  T

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Target: scaffold0993 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 1370 - 1312
Alignment:
Q  91 gctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    |||||||||||  |||||||||| |  ||||||| ||| ||||||||||||||||||||    
T  1370 gctcctgttgagattgtttgttatacttgtggtgagaaaggccacaagagtaatgcttg 1312  T

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Target: scaffold0751 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 5609 - 5472
Alignment:
Q  50 agcagagattgaatgatgagagaccacaaaaagggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttg 149  Q
    ||||||||||||||||||||||    | || ||| ||| ||||||||  |||| ||||||||| ||| |||||||  || |||||||||||||||| |||    
T  5609 agcagagattgaatgatgagaggaggccaagagg-agagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttg 5511  T
Q  150 cactcaagatgagaagaaatgtttcagatgcggtcagaa 188  Q
        | |||||||||||| || ||||| || ||||||||    
T  5510 tgaccgagatgagaagaagtgcttcaggtgtggtcagaa 5472  T

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Target: scaffold0310 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 11373 - 11265
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||  |||  ||||||||||||| |||||||  || ||||||||||| ||||||||   |  |||||||| ||| || ||||| || ||    
T  11373 ggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatgagaggaagtgcttcaggtgtgg 11274  T
Q  183 tcagaaggg 191  Q
    |||||||||    
T  11273 tcagaaggg 11265  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 514261 - 514369
Alignment:
Q  83 ggagaaatgctcctgttgatgttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcgg 182  Q
    ||||| ||||||||  |||  ||||||||||||| ||||||| ||| ||||||||||| |||| |||   | |||| |||| ||| || ||||| || ||    
T  514261 ggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggtaaagacgagaggaagtgcttcaggtgtgg 514360  T
Q  183 tcagaaggg 191  Q
    |||||||||    
T  514361 tcagaaggg 514369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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