View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0243_high_41 (Length: 298)
Name: NF0243_high_41
Description: NF0243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0243_high_41 |
 | |
|
| [»] scaffold0079 (1 HSPs) |
| | |
|
| [»] scaffold0184 (1 HSPs) |
| | |
|
| [»] scaffold0078 (1 HSPs) |
| | |
|
| [»] scaffold0751 (1 HSPs) |
| | |
|
| [»] scaffold0013 (1 HSPs) |
| | |
|
| [»] scaffold0097 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 22 - 294
Target Start/End: Original strand, 44116304 - 44116576
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
121 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44116304 |
catcaacacagtggttagcaactgcgtaggcacctaagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
44116403 |
T |
|
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtag |
221 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44116404 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacagaagctgaaatggatgcacgtctatgtgatcaccataagtag |
44116503 |
T |
|
| Q |
222 |
aaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
44116504 |
aaaacttgacgtcatccacctccaagcgatcctggcataagcggtaatggtgcacatctttatgccctctgct |
44116576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 8317476 - 8317690
Alignment:
| Q |
71 |
ggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagt |
170 |
Q |
| |
|
|||||||||||||| || |||||| || | | ||| || |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |
|
|
| T |
8317476 |
ggatgtctgggaacatcttgtacatagaaaagctgtatcgttacccgctcaggtaaatgacggtttaccctctccttcccgcacatcagccatcccgagt |
8317575 |
T |
|
| Q |
171 |
aagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatg |
270 |
Q |
| |
|
|||| |||||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| ||| |||||||||||| |
|
|
| T |
8317576 |
tagtgacaataagctggaatgagtgcacgtctctgtgatcaccataagtagaaaatctgacgtcatccacctccaagtgatccaggcgtaagcggtaatg |
8317675 |
T |
|
| Q |
271 |
gtacacatctttatg |
285 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
8317676 |
gtgcacatctttatg |
8317690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 44 - 253
Target Start/End: Complemental strand, 41269574 - 41269365
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
|||||||||||||||| ||| ||| |||||||||||||| ||||||||| || | | | |||||||||||||||| ||||||||| |||||| ||| |
|
|
| T |
41269574 |
tgcgtaggcacctgagcaacagatgacggatgtctgggaacatcctgtacatagaaaagcctcctctttacccgctcaaataaatgacgttacaccatct |
41269475 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
|||| ||| |||| |||||||||||||||||| ||| |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41269474 |
cctttccgcacatcagccatcccgagtaagtgacaataagttgaaataggtgcacgtctctgtgatcaccataagtagaaaacctgacgtcatccacctc |
41269375 |
T |
|
| Q |
244 |
caagcgatcc |
253 |
Q |
| |
|
|||||||||| |
|
|
| T |
41269374 |
caagcgatcc |
41269365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 28 - 294
Target Start/End: Original strand, 42096158 - 42096424
Alignment:
| Q |
28 |
cacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaa |
127 |
Q |
| |
|
||||||||| ||||| |||||| ||| ||||| |||| ||| ||||||||| |||| || |||||| || | | || ||||||||||||| |||||||| |
|
|
| T |
42096158 |
cacagtggtcagcaaatgcgtaagcatctgagcgacagatgacggatgtctgagaacatcttgtacatagaaaagctacctctttacccgcacaggtaaa |
42096257 |
T |
|
| Q |
128 |
tgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacc |
227 |
Q |
| |
|
|||||||| ||| ||||||||||| ||| || ||||||||||||||| ||||||||| | ||| ||| |||||||||||||||||||||||| |
|
|
| T |
42096258 |
tgacggtataccatctccttcccgctcatcagtcatcccgagtaagtgacaataagctgaaaatggcgcatctctctgtgatcaccataagtagaaaacc |
42096357 |
T |
|
| Q |
228 |
tgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
|||| ||||||||||| |||||||| | |||||| ||||||| || |||| ||||| ||||||| |
|
|
| T |
42096358 |
tgacatcatccacctctaagcgatcaagcagtaagcgataatggtgcatatctgtatgccctctgct |
42096424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 23713937 - 23714041
Alignment:
| Q |
71 |
ggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagt |
170 |
Q |
| |
|
|||||||| || ||||| |||| ||||| ||||||| ||| || | || ||||||| ||||||||||||||||||||||| |||| || |||||||||| |
|
|
| T |
23713937 |
ggatgtcttgggacgtcatgtataaaggcaaactgccacttaactcacttaggtaaacgacggtacaccctctccttcccgcacataagtcatcccgagt |
23714036 |
T |
|
| Q |
171 |
aagtg |
175 |
Q |
| |
|
||||| |
|
|
| T |
23714037 |
aagtg |
23714041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 22 - 294
Target Start/End: Original strand, 42464008 - 42464280
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
121 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
42464008 |
catcaacacagtggtcagcaactgcgtaggcacctgagggacatctgacggatgtctgggaacgtcctatacaaaggataactgcctctttacccactca |
42464107 |
T |
|
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtag |
221 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
42464108 |
ggtaaatgacggtacaccatctccttcccgcacatgagccatcccgagtaagtgcacagaagctgaaatggatgcacgtctctatgatcaccataagtag |
42464207 |
T |
|
| Q |
222 |
aaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||| ||||||| |
|
|
| T |
42464208 |
aaaacctgacgtcatccacctccaagcgatccatacgtaagcggtgatggtgcacatctttatgccctctgct |
42464280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 22 - 294
Target Start/End: Complemental strand, 50914615 - 50914343
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
121 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50914615 |
catcaacacagtggtcagcaactgcgtaggcacttgagggacatctgacggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
50914516 |
T |
|
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtag |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
50914515 |
ggtaaatgacggtacaccctctccttcccgcacatgagccatcccgggtaagtgcacagaagctgaaatgggtgcacgtctctgtgatcaccataagtag |
50914416 |
T |
|
| Q |
222 |
aaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
|||||||||||||||||||||| |||||||| | |||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
50914415 |
aaaacctgacgtcatccacctctaagcgatcaagcagtaagcggtaatggtgcacatcagtatgccctctgct |
50914343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 22 - 294
Target Start/End: Complemental strand, 31387265 - 31386993
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
121 |
Q |
| |
|
||||| |||||||||||||| |||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
31387265 |
catcaacacagtggttagcatctgcgtaggcacatgagggacatctgacggatgtctaggaacgtcatgtacaaaggataactgcctctttactcgctca |
31387166 |
T |
|
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtag |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
31387165 |
ggtaaatgacggtacaccctctccttcccgcacatgagccatcccgagtaagtgcacataagctgaaatgggtgcacgtctctgtgatcaccataagtag |
31387066 |
T |
|
| Q |
222 |
aaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
||||||| |||||||||||||||||||||||| | |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
31387065 |
aaaacctaacgtcatccacctccaagcgatccatacgtaagcggtaatggtggacatctttatgccctctgct |
31386993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 22 - 294
Target Start/End: Original strand, 27106411 - 27106682
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
121 |
Q |
| |
|
||||| ||||||| | ||||| |||||||||||||||||||||| || |||||||||| |||||| |||||||||||||||||| |||||||||| ||| |
|
|
| T |
27106411 |
catcaacacagtgatcagcaatcgcgtaggcacctgagggacatccgacggatgtctggaaacgtcatgtacaaaggataactgc-tctttacccgttca |
27106509 |
T |
|
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtag |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
27106510 |
ggtaaatgacggtacaccctctccttcccgcacatgagtcatcccgagtacgtgcacagaagctgaaatggatgcacgtctctgtgatcaccataagtag |
27106609 |
T |
|
| Q |
222 |
aaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||||| ||||||| |
|
|
| T |
27106610 |
aaaacctgacgtcatccacctccaagcgatccatgcgtaagcggtaatggtgcatatctttatgtcctctgct |
27106682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 22 - 291
Target Start/End: Original strand, 4912321 - 4912590
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
121 |
Q |
| |
|
||||| ||||||||| ||||||| || ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
4912321 |
catcaacacagtggtcagcaactacggaggcacctgagggacatctgacagatgtctcggaacgttatgtacaaaggataactgtctctttacccgctca |
4912420 |
T |
|
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtag |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||| | ||||||| |||||| || |||||||| |
|
|
| T |
4912421 |
ggtaaatgacggtacaccctctccttcccgcacatgagtcatcctgagtaagtgcacagaagctgaaatgggttcacgtctttgtgattactataagtag |
4912520 |
T |
|
| Q |
222 |
aaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctct |
291 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||||||||| |||| |
|
|
| T |
4912521 |
aaaacctgacgtcacccacctccaagcgatctaggcgtaagcggtaatggtgcacatctttatgccctct |
4912590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 22 - 252
Target Start/End: Complemental strand, 18242690 - 18242460
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
121 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
18242690 |
catcaacacagtggtcagcaactgcgtaggcacctgagggacatcttacggatgtctgggaacgtcttgtacaaaggataactgtctctttacccgctca |
18242591 |
T |
|
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtag |
221 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
18242590 |
ggtaaatgacagtacaccctctccttcccgcacatgagtcatcccaagtaagtgcacataagctgaaatgggtgcacgtctctgtgatcaccataagtag |
18242491 |
T |
|
| Q |
222 |
aaaacctgacgtcatccacctccaagcgatc |
252 |
Q |
| |
|
||||| |||||||||||||||| |||||||| |
|
|
| T |
18242490 |
aaaacttgacgtcatccacctctaagcgatc |
18242460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 15291986 - 15292189
Alignment:
| Q |
32 |
gtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgac |
131 |
Q |
| |
|
||||| ||||| |||||||||||||||| |||| ||| |||||||||||||| ||||||||| || | | ||||| ||||||||||||||||||||||| |
|
|
| T |
15291986 |
gtggtcagcaaatgcgtaggcacctgagcgacagatgacggatgtctgggaacatcctgtacatagaaaagctgcc-ctttacccgctcaggtaaatgac |
15292084 |
T |
|
| Q |
132 |
ggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgac |
231 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||| || || ||| || | | ||| |||||||||||||||||||||||||||| |
|
|
| T |
15292085 |
ggtacaccctctccttcccgcacatcagccatcccgagtaagtgacaataaactaaaaagggcgtatttctctgtgatcaccataagtagaaaacctgac |
15292184 |
T |
|
| Q |
232 |
gtcat |
236 |
Q |
| |
|
||||| |
|
|
| T |
15292185 |
gtcat |
15292189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 286
Target Start/End: Original strand, 46192688 - 46192942
Alignment:
| Q |
32 |
gtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgac |
131 |
Q |
| |
|
||||| ||||| || ||||||| ||||| ||||||||| |||||||||||||| ||||||||| || | | || ||||||| |||||||||||||||||| |
|
|
| T |
46192688 |
gtggtcagcaaatgtgtaggcatctgagcgacatctgacggatgtctgggaacatcctgtacatagaaaagctacctcttttcccgctcaggtaaatgac |
46192787 |
T |
|
| Q |
132 |
ggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgac |
231 |
Q |
| |
|
|||||| ||||| ||||||| |||| || ||||||||||||||| ||||| ||| | || | ||| | |||||| ||||||||||||||||| |
|
|
| T |
46192788 |
ggtacatcctcttcttcccgcacatcagtcatcccgagtaagtgacaataagcttaaaatggtgtatttctctatgatcagtataagtagaaaacctgaa |
46192887 |
T |
|
| Q |
232 |
gtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgc |
286 |
Q |
| |
|
||||||||||| |||||||| | | |||| ||||||||| ||||||||||||| |
|
|
| T |
46192888 |
atcatccacctctaagcgatcaagccgtaagtggtaatggtgcacatctttatgc |
46192942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 42056161 - 42056269
Alignment:
| Q |
48 |
taggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctcctt |
147 |
Q |
| |
|
|||||||||||| |||| ||| ||||||||||||| ||||||||| || | | |||||||||||||| |||| |||||||||| |||||| ||||||| |
|
|
| T |
42056161 |
taggcacctgagcgacagatgacagatgtctgggaacatcctgtacatagaaaagctgcctctttacccactcatgtaaatgacgatacaccttctcctt |
42056260 |
T |
|
| Q |
148 |
cccgaacat |
156 |
Q |
| |
|
|||| |||| |
|
|
| T |
42056261 |
cccgcacat |
42056269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 28 - 294
Target Start/End: Original strand, 31501528 - 31501794
Alignment:
| Q |
28 |
cacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaa |
127 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
31501528 |
cacagtggtcagcaactgcgtaggcacctgagggacatctgacggatgtctgggaacgtcttgtacaaaggataattgcctctttacccgctcaggtaaa |
31501627 |
T |
|
| Q |
128 |
tgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacc |
227 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||| |
|
|
| T |
31501628 |
tgacagtacaccctctccttcccgcacatgagtcatcccgagtaagtgcacagaagctgaaatgggtgcacgtctctgtgatcaccataaatagaaaaca |
31501727 |
T |
|
| Q |
228 |
tgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
31501728 |
tgacgacatccacctccaagcgatccaggcgtaagcggtaatggtgcacatctttatgccctctgct |
31501794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 28 - 286
Target Start/End: Original strand, 40613243 - 40613501
Alignment:
| Q |
28 |
cacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaa |
127 |
Q |
| |
|
||||||||| |||||||||||||||| ||||| |||| ||| |||||||||||||| |||||||||||| | |||||||||||||| |||||| ||||| |
|
|
| T |
40613243 |
cacagtggtcagcaactgcgtaggcatctgagcgacagatgacggatgtctgggaacatcctgtacaaagaaaaactgcctctttacacgctcacgtaaa |
40613342 |
T |
|
| Q |
128 |
tgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacc |
227 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||||| |||||| |
|
|
| T |
40613343 |
tgacggtacaccctctccttcccgaacatcagccatcccgagtaagtgcacaaaagctgaaaagggcgcacatctatgtgatcaccataagtacaaaacc |
40613442 |
T |
|
| Q |
228 |
tgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgc |
286 |
Q |
| |
|
| || ||||||||||| ||||||||| | | |||||||||||||| ||||| ||||||| |
|
|
| T |
40613443 |
tcacatcatccacctctaagcgatccagccgtaagcggtaatggtgcacatatttatgc |
40613501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 44 - 285
Target Start/End: Original strand, 2120260 - 2120501
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
|||||||||||||||| |||| ||| ||||||||||||| ||||||| | || | | ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2120260 |
tgcgtaggcacctgagcgacagatgacagatgtctgggaacatcctgtatatagaaaagctgtctctttacccgctcaggtaaatgacggtacaccctct |
2120359 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
|||||||| |||| |||||||||||||||||| || ||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
2120360 |
ccttcccgcacatcagccatcccgagtaagtgacaataaactggaatgggtgcacgtctctgtgatcaccataagtagaaaacctgatgtcatccacctc |
2120459 |
T |
|
| Q |
244 |
caagcgatcctggcataagcggtaatggtacacatctttatg |
285 |
Q |
| |
|
|||| |||| ||| |||||||||||||| |||||||||||| |
|
|
| T |
2120460 |
caaggaatccaggcgtaagcggtaatggtgcacatctttatg |
2120501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 31 - 286
Target Start/End: Original strand, 695133 - 695387
Alignment:
| Q |
31 |
agtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatga |
130 |
Q |
| |
|
|||||| ||||||||| |||||| |||| ||||||||| ||||||||| |||| || ||||| || | |||| |||||||||||||||||||||||| |
|
|
| T |
695133 |
agtggtcagcaactgcataggcatttgagtgacatctgacggatgtctgagaacatcacgtacatagaaaaactatctctttacccgctcaggtaaatga |
695232 |
T |
|
| Q |
131 |
cggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctga |
230 |
Q |
| |
|
||||||||||||||||||| | |||| || |||||||||||||||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
695233 |
cggtacaccctctccttcc-gcacatcagtcatcccgagtaagtgcacagaagctgaaattggtgcacctctctgtgatcaccataagtagaaaacctga |
695331 |
T |
|
| Q |
231 |
cgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgc |
286 |
Q |
| |
|
||||||||||||| |||||||| | |||||||||||| | ||||||| ||||| |
|
|
| T |
695332 |
cgtcatccacctctaagcgatcaagcagtaagcggtaatgatgcacatctgtatgc |
695387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 103 - 285
Target Start/End: Complemental strand, 28652313 - 28652131
Alignment:
| Q |
103 |
ctgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtct |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| |||||||||| |||||| ||||| ||||||||| |
|
|
| T |
28652313 |
ctgcctctttacccgctcaggtaaatgacgcaacaccctctccttcccgcacattagccatctcgagtaagtgacaataagctggaatgggtgcacgtct |
28652214 |
T |
|
| Q |
203 |
atgtgatcaccataagtagaaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatg |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |
|
|
| T |
28652213 |
ctgtgatcaccataagtagaaaacctgacgtcatccacctccaagcgatccaggcgtaagcggtaatggtgcacatctttatg |
28652131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 286
Target Start/End: Complemental strand, 4174520 - 4174272
Alignment:
| Q |
38 |
agcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtaca |
137 |
Q |
| |
|
||||| |||||||||||||||| |||| ||| |||||||||||||| ||||||||| || | | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4174520 |
agcaaatgcgtaggcacctgagcgacagatgacggatgtctgggaacatcctgtacatagaaaagctgcctctttacccgctcaggtaaatgacggtaca |
4174421 |
T |
|
| Q |
138 |
ccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatc |
237 |
Q |
| |
|
|| |||||||||| |||| | |||||| |||||||| ||||||||| |||| | ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4174420 |
ccatctccttcccacacatcactcatcccaagtaagtgacaataagctgaaaaagatgtatctctctgtgatcaccataagtagaaaacctgacgtcatc |
4174321 |
T |
|
| Q |
238 |
cacctccaagcgatcctggcataagcggtaatggtacacatctttatgc |
286 |
Q |
| |
|
|||||| ||| |||| | ||| |||||||||||| |||| |||||||| |
|
|
| T |
4174320 |
cacctctaagtgatcaagccatgagcggtaatggtgcacaactttatgc |
4174272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 55 - 253
Target Start/End: Complemental strand, 29901965 - 29901767
Alignment:
| Q |
55 |
ctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaac |
154 |
Q |
| |
|
||||| |||| |||| |||||||||| || ||| ||||||||| ||| ||| ||||||||||||||||||||||| |||||| |||||||| || || |
|
|
| T |
29901965 |
ctgagcgacagctgaaggatgtctggaaatgtcttgtacaaagtcaaacaacctttttacccgctcaggtaaatgacgatacaccttctccttctcgcac |
29901866 |
T |
|
| Q |
155 |
atgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaagcgatcc |
253 |
Q |
| |
|
|| ||||||||||||||||||||| |||| ||||| || |||| ||| ||||||||||||| ||||||||||| || ||||||||||| ||||||||| |
|
|
| T |
29901865 |
atcagccatcccgagtaagtgcacagaaggtgaaaagggcgcacttctctgtgatcaccatatgtagaaaacctcacatcatccacctctaagcgatcc |
29901767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 253
Target Start/End: Complemental strand, 21833180 - 21832988
Alignment:
| Q |
61 |
gacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatgagc |
160 |
Q |
| |
|
||||||||| |||||| |||||| ||| ||||||||||| ||||||| ||| |||||||| |||||||||| ||||||||||| ||||||| |||| ||| |
|
|
| T |
21833180 |
gacatctgacggatgtttgggaatgtcatgtacaaaggaaaactgccacttaacccgctctggtaaatgacagtacaccctcttcttcccgcacataagc |
21833081 |
T |
|
| Q |
161 |
catcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaagcgatcc |
253 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||| |||||||| |||| ||||| |||| || ||||||||||| ||||||||| |
|
|
| T |
21833080 |
catcccgagtaagtgacaataagctgaaatggatgcatctctctgtgatcatcatatgtagaccacctcacttcatccacctctaagcgatcc |
21832988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 294
Target Start/End: Complemental strand, 26391330 - 26391107
Alignment:
| Q |
71 |
ggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagt |
170 |
Q |
| |
|
|||||||| ||||| ||||||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
26391330 |
ggatgtctaggaacatcctgtacatagaaaagctgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgcacactagccatcccgagt |
26391231 |
T |
|
| Q |
171 |
aagtgcacggaagctga-aatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaagcgatcctggcataagcggtaat |
269 |
Q |
| |
|
||||| ||||||| ||||| | | ||| ||||||||||||||||| |||||||||||||||||||| | |||||||| | ||||||||||| |
|
|
| T |
26391230 |
aagtgacaataagctgagaatgg-cgtatctctctgtgatcaccataagtaaaaaacctgacgtcatccaccactaagcgatcaagtagtaagcggtaat |
26391132 |
T |
|
| Q |
270 |
ggtacacatctttatgctctctgct |
294 |
Q |
| |
|
||| |||||| ||||| ||||||| |
|
|
| T |
26391131 |
ggtgcacatcagtatgccctctgct |
26391107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 2776858 - 2776730
Alignment:
| Q |
47 |
gtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctcct |
146 |
Q |
| |
|
||||||||||||| |||| ||| |||||||||||||| ||||||||| || | | || |||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
2776858 |
gtaggcacctgagcgacagatgacggatgtctgggaacatcctgtacatagaaaagatgtctctttacccgctcaggtaaatgacgatacaccctttcct |
2776759 |
T |
|
| Q |
147 |
tcccgaacatgagccatcccgagtaagtg |
175 |
Q |
| |
|
||||| |||| |||||||||||||||||| |
|
|
| T |
2776758 |
tcccgcacatcagccatcccgagtaagtg |
2776730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 270
Target Start/End: Complemental strand, 34458246 - 34458027
Alignment:
| Q |
28 |
cacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaa |
127 |
Q |
| |
|
||||||||| |||||||||||||||| || || ||||||||| |||||||||| ||| || |||||| | | ||||| |||| |||||||||| |
|
|
| T |
34458246 |
cacagtggtcagcaactgcgtaggcatctaagcgacatctgacggatgtctggaaacatcatgtacagataaaaactgtctct-------ctcaggtaaa |
34458154 |
T |
|
| Q |
128 |
tgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacc |
227 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||||||||| || |||| ||| | ||||||| ||||||| |||| |
|
|
| T |
34458153 |
tgacggtacaccctctccttcccga----------------gtaagtgcacagaagctgaaaagggcgcacatctctctgatcacgataagtacaaaagt |
34458070 |
T |
|
| Q |
228 |
tgacgtcatccacctccaagcgatcctggcataagcggtaatg |
270 |
Q |
| |
|
| || ||||||||||| ||| ||||| | | |||||||||||| |
|
|
| T |
34458069 |
tcacatcatccacctctaagagatccagccgtaagcggtaatg |
34458027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 20723323 - 20723206
Alignment:
| Q |
58 |
agggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatg |
157 |
Q |
| |
|
|||||||||||||||||||||||| | || ||| |||| ||||| ||| | ||| || |||||||||||||||||||| | ||||||||| |||| |
|
|
| T |
20723323 |
agggacatctgatggatgtctggggatgtaatgtttaaagccaaactggctcgtaacctgcccaggtaaatgacggtacaccttttccttcccgcacata |
20723224 |
T |
|
| Q |
158 |
agccatcccgagtaagtg |
175 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
20723223 |
agttatcccgagtaagtg |
20723206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 161; Significance: 7e-86; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 22 - 294
Target Start/End: Complemental strand, 55150573 - 55150301
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
121 |
Q |
| |
|
||||| ||||||||| ||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
55150573 |
catcaacacagtggtcagcaattgcctaggcacttgagggacatctgacggatgtctgggaacgtcatgtacaaaggataactgtctctttacccgctca |
55150474 |
T |
|
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtag |
221 |
Q |
| |
|
|||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||| |||| | |||||||||||||||| |
|
|
| T |
55150473 |
tgtaaataacgatacaccctctccttcccgcacatgagccatcccgagtaagtgcacagaagctgaaatgggtgcatgtctctatgatcaccataagtag |
55150374 |
T |
|
| Q |
222 |
aaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
||||||||||||||||||||| |||||||| | |||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
55150373 |
aaaacctgacgtcatccacctttaagcgatcaagcattaagcggtaatggtgcacatcagtatgccctctgct |
55150301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 292
Target Start/End: Complemental strand, 8924 - 8654
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctca |
121 |
Q |
| |
|
||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||||||| |||||||||| || | ||||||||||||||||||| |
|
|
| T |
8924 |
catcaacacagtggtcagcaactgcgtatgcacctgagggacatctggcagatgtctgggaatgtcctgtacatagacaagctgcctctttacccgctca |
8825 |
T |
|
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtag |
221 |
Q |
| |
|
|||||||||||||||||||| ||||||| | |||| | |||| |||||||||||||| ||||||||||||| |||| ||| ||||||||| || |||| |
|
|
| T |
8824 |
ggtaaatgacggtacaccctatccttcctgcacatcacccattccgagtaagtgcacagaagctgaaatgggcgcacctctctgtgatcactgtaggtag |
8725 |
T |
|
| Q |
222 |
aaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctg |
292 |
Q |
| |
|
|||||||||||||||||||||| |||||||| | ||||||||||||||| ||||||| ||||| ||||| |
|
|
| T |
8724 |
aaaacctgacgtcatccacctctaagcgatcaagcaataagcggtaatggtgcacatctgtatgccctctg |
8654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 44 - 279
Target Start/End: Complemental strand, 18907914 - 18907679
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
|||||||||||||||| |||| ||| |||||||||||||| |||| |||| | | | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18907914 |
tgcgtaggcacctgagcgacagatgacggatgtctgggaacatcctatacataaaaaagttgcctctttacccgctcaggtaaatgacggtacaccctct |
18907815 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
|||||| | |||| |||||||||||||||||| |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
18907814 |
ccttcctgcacatcagccatcccgagtaagtgacaataagctgaaatgggtgcacgtctctgtgatgaccataagtagaaaacctgacgtcatccacctc |
18907715 |
T |
|
| Q |
244 |
caagcgatcctggcataagcggtaatggtacacatc |
279 |
Q |
| |
|
|||||||| | |||||||||||||| |||||| |
|
|
| T |
18907714 |
taagcgatcaagcagtaagcggtaatggtgcacatc |
18907679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 32 - 286
Target Start/End: Original strand, 180712 - 180966
Alignment:
| Q |
32 |
gtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgac |
131 |
Q |
| |
|
||||| |||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||| || | | |||||||||||||||||||||||||||| |
|
|
| T |
180712 |
gtggtcagcaactgcgtaggcacctgagcgacagatgacggatgtctgggaacatcctgtacatagaaaagttgcctctttacccgctcaggtaaatgac |
180811 |
T |
|
| Q |
132 |
ggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgac |
231 |
Q |
| |
|
|||||||||||||||||||| |||| || ||||||||||||||| ||||||||| || | | || ||| |||||||||||||||||| ||||| |
|
|
| T |
180812 |
ggtacaccctctccttcccgcacatcagtcatcccgagtaagtgacaataagctgaaaagggcgtatccctctgttatcaccataagtagaaaatctgac |
180911 |
T |
|
| Q |
232 |
gtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgc |
286 |
Q |
| |
|
|||||||||||| |||||||| | | |||||||||||||| ||||| ||||||| |
|
|
| T |
180912 |
gtcatccacctctaagcgatcaagccgtaagcggtaatggtgcacatttttatgc |
180966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 44 - 272
Target Start/End: Original strand, 18943407 - 18943635
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
|||||||||||||||| |||| ||| |||||||||||||| ||||||||| | | | || |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18943407 |
tgcgtaggcacctgagcgacagatgacggatgtctgggaacatcctgtacataaaaaagcttcctctttacccgcttaggtaaatgacggtacaccctct |
18943506 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
|| |||| |||| ||||||| |||||||| | | |||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18943507 |
ccatcccacacatcagccatctcgagtaagcgacaataggctgaaatgggtgcacgtctctatgatcaccataagtagaaaacctgacgtcatccacctc |
18943606 |
T |
|
| Q |
244 |
caagcgatcctggcataagcggtaatggt |
272 |
Q |
| |
|
|||||||||| ||| | |||||||||||| |
|
|
| T |
18943607 |
caagcgatccaggcgtgagcggtaatggt |
18943635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 47 - 252
Target Start/End: Complemental strand, 52560799 - 52560594
Alignment:
| Q |
47 |
gtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctcct |
146 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||| ||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52560799 |
gtaggcacctgagcgacatatgatggatgtctgggaacatcctgtacatagaaaagctgcctctttacccgctcaggtaaatgacggtacaccctctcct |
52560700 |
T |
|
| Q |
147 |
tcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaa |
246 |
Q |
| |
|
||| | |||| |||||||||||||||||| ||||| ||| || | | ||| ||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
52560699 |
tcctgcacatcagccatcccgagtaagtgacaataagctaaaaagggcgtatctctctgtgatcaccataaggagaaaacctgacgtcatccacctctaa |
52560600 |
T |
|
| Q |
247 |
gcgatc |
252 |
Q |
| |
|
|||||| |
|
|
| T |
52560599 |
gcgatc |
52560594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 32 - 285
Target Start/End: Complemental strand, 45034399 - 45034146
Alignment:
| Q |
32 |
gtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgac |
131 |
Q |
| |
|
||||| ||||| |||||||||||||||| ||| ||| ||||||| ||||| ||||| ||| || | | |||||||||||||||||||||||||| || |
|
|
| T |
45034399 |
gtggtcagcaaatgcgtaggcacctgagcgacggatgacagatgtctcggaacatcctgcacatagaaaagctgcctctttacccgctcaggtaaattac |
45034300 |
T |
|
| Q |
132 |
ggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgac |
231 |
Q |
| |
|
|||||||||||||||||||| |||| || ||||||||||||||| ||||||||| || || | ||| |||||||||||||||||||||||||||| |
|
|
| T |
45034299 |
ggtacaccctctccttcccgcacatcagtcatcccgagtaagtgacaataagctgaaaagggtgtatctctctgtgatcaccataagtagaaaacctgac |
45034200 |
T |
|
| Q |
232 |
gtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatg |
285 |
Q |
| |
|
||||||||||| |||||||| | | | |||||||||||| |||||||||||| |
|
|
| T |
45034199 |
gtcatccacctttaagcgatcaagtcgtgagcggtaatggtgcacatctttatg |
45034146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 291
Target Start/End: Complemental strand, 38110871 - 38110608
Alignment:
| Q |
28 |
cacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaa |
127 |
Q |
| |
|
||||||||||||||| |||||||||| |||| || | ||| |||||||||||||| || |||||| || | | ||| |||||||||| |||||||||| |
|
|
| T |
38110871 |
cacagtggttagcaaatgcgtaggcatctgaacgatagatgacggatgtctgggaacatcatgtacatagaaaagctgtctctttacccactcaggtaaa |
38110772 |
T |
|
| Q |
128 |
tgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacc |
227 |
Q |
| |
|
|||||||||| | | ||||||||| |||| | |||||||||||||||| ||||||||| || | | ||| ||||||| |||||||||||||||| |
|
|
| T |
38110771 |
tgacggtacatcatatccttcccgcacatcaaccatcccgagtaagtgacaataagctgaaaagggcgtatctctttgtgatcgccataagtagaaaacc |
38110672 |
T |
|
| Q |
228 |
tgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctct |
291 |
Q |
| |
|
|||||||||| ||||| |||||||| | |||||||||||||| ||||| | ||||| |||| |
|
|
| T |
38110671 |
tgacgtcatcaacctctaagcgatcaagcagtaagcggtaatggtgcacatttgtatgccctct |
38110608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 44 - 286
Target Start/End: Complemental strand, 48164520 - 48164283
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||| ||||| || |||||| || | | ||||||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
48164520 |
tgcgtaggcacctgagcgacatatgatagatg----ggaacatcttgtacatagaaaagctgcctctttacccgctcaggtaaatgacggtacatcatct |
48164425 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
|||||||| |||| || ||||||||||||||| ||||||||| || | | ||| ||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
48164424 |
ccttcccgcacatcagtcatcccgagtaagtgacaataagctgaaaagggcgtatctctcggtgatcaccataagtagaaaatctgacgtcattcacctc |
48164325 |
T |
|
| Q |
244 |
caagcgatcctggcataagcggtaatggtacacatctttatgc |
286 |
Q |
| |
|
|||||||| | | | ||||||||| || ||||||||||||| |
|
|
| T |
48164324 |
taagcgatcaagccgtgagcggtaat-gtgcacatctttatgc |
48164283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 292
Target Start/End: Original strand, 13826724 - 13826968
Alignment:
| Q |
48 |
taggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctcctt |
147 |
Q |
| |
|
|||||| || |||||||||||| ||||||||||| | |||||||| |||| | || |||||| || |||||||||||||||||||||| ||||||||| |
|
|
| T |
13826724 |
taggcatctcagggacatctgacggatgtctggggatgtcctgtataaagccaagctacctcttaactcgctcaggtaaatgacggtacatcctctcctt |
13826823 |
T |
|
| Q |
148 |
cccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaag |
247 |
Q |
| |
|
| || |||| |||||||||||||||||| ||||||||| || |||| ||| | |||||| |||| |||| |||| || ||||||||||| ||| |
|
|
| T |
13826824 |
ctcgcacatcagccatcccgagtaagtgacaataagctgaaaagggtgcatctctctttgatcatcatatatagaccacctcacatcatccacctctaag |
13826923 |
T |
|
| Q |
248 |
cgatcctggcataagcggtaatggtacacatctttatgctctctg |
292 |
Q |
| |
|
|||||| | | | |||||||||||| |||| || ||||| ||||| |
|
|
| T |
13826924 |
cgatccagccgtgagcggtaatggtgcacaactgtatgccctctg |
13826968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 123; Significance: 3e-63; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 47 - 285
Target Start/End: Original strand, 37980671 - 37980909
Alignment:
| Q |
47 |
gtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctcct |
146 |
Q |
| |
|
||||||||||||| |||| ||| |||||||| ||||| || |||||| || | | || ||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37980671 |
gtaggcacctgagagacagatgacggatgtctaggaacatcatgtacatagaaaagcttcctctttactcgctcaggtaaatgacggtacaccctctcct |
37980770 |
T |
|
| Q |
147 |
tcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaa |
246 |
Q |
| |
|
||||| |||| |||||||||||||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
37980771 |
tcccgcacatcagccatcccgagtaagtgacaataagctggaatgggtgcacgtctctgtgatcaccataagtagaaaacctgacgtcatccacctcaaa |
37980870 |
T |
|
| Q |
247 |
gcgatcctggcataagcggtaatggtacacatctttatg |
285 |
Q |
| |
|
||||||| | | |||||||||||| | |||||||||||| |
|
|
| T |
37980871 |
gcgatccagacgtaagcggtaatgatgcacatctttatg |
37980909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 44 - 286
Target Start/End: Complemental strand, 23066965 - 23066723
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
||||||||||| |||| |||| ||||||||||||| |||| ||||||||| || | | ||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
23066965 |
tgcgtaggcacttgagcgacagatgatggatgtctgtgaacatcctgtacatagaaaagctggctctttacccgctcaggtaaatgatggtacaccctct |
23066866 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
|||||||| |||| |||||||||||||||||| ||| | ||| || || | ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23066865 |
ccttcccgcacatcagccatcccgagtaagtgacaataagtttaaaagggtgtatctctctgtgatcaccataagtagaaaacctgacgtcatccacctc |
23066766 |
T |
|
| Q |
244 |
caagcgatcctggcataagcggtaatggtacacatctttatgc |
286 |
Q |
| |
|
|||||||| | | | |||||||||||||||||||||||||| |
|
|
| T |
23066765 |
taagcgatcaagccgtgagcggtaatggtacacatctttatgc |
23066723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 44 - 289
Target Start/End: Original strand, 9039300 - 9039545
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
|||||||||||||||| |||| ||| |||||||||||| || |||||| || | | |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9039300 |
tgcgtaggcacctgagtgacagatgacaaatgtctgggaacatcatgtacatagaaaagctgcctctttacccgctcaggtaaatgacggtaccccctct |
9039399 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
|||||||| |||| || ||||| ||||||||| ||||||||| || | | ||| | ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9039400 |
ccttcccgcacatcagtcatcctgagtaagtgacaataagctgaaaagggcgtatctctctatgatcaccataagtagaaaaccttacgtcatccacctc |
9039499 |
T |
|
| Q |
244 |
caagcgatcctggcataagcggtaatggtacacatctttatgctct |
289 |
Q |
| |
|
|||||||| | | | |||||||||||| |||||||||||||||| |
|
|
| T |
9039500 |
taagcgatcaagccgttagcggtaatggtgcacatctttatgctct |
9039545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 294
Target Start/End: Complemental strand, 19876261 - 19876084
Alignment:
| Q |
117 |
gctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccata |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||| ||||| || | | ||| ||||||||||||| |
|
|
| T |
19876261 |
gctcaggtaaatgacggtacaccctctccttcccgcacatcagccatcccgagtaagtgacaataagttgaaaagggcgtatctctctgtgatcaccata |
19876162 |
T |
|
| Q |
217 |
agtagaaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
|||| ||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| ||||| ||||||| |
|
|
| T |
19876161 |
agtaaaaaacctgacgacatccacctctaagcgatcaagcagtacgcggtaatggtgcacatcaatatgccctctgct |
19876084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 113 - 252
Target Start/End: Complemental strand, 7253181 - 7253042
Alignment:
| Q |
113 |
acccgctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcac |
212 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||| ||| | | | ||| ||||||||| |
|
|
| T |
7253181 |
acccgctcaggtaaatgacggtacaccccctccttcccgcacatcagccatcccgagtaagtgacaataagctaaaaatggcgtatctctctgtgatcac |
7253082 |
T |
|
| Q |
213 |
cataagtagaaaacctgacgtcatccacctccaagcgatc |
252 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
7253081 |
cataagtagaaaatctgacgtcatccacctctaagcgatc |
7253042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 10826102 - 10826147
Alignment:
| Q |
22 |
catcatcacagtggttagcaactgcgtaggcacctgagggacatct |
67 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
10826102 |
catcaacacagtggtcagcaattgcgtaggcacctgagggacatct |
10826147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 7262663 - 7262576
Alignment:
| Q |
32 |
gtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgct |
119 |
Q |
| |
|
||||| ||||| |||||||||| ||||| |||| ||| |||||||||||| ||||||||| || | | ||||||||||||||||| |
|
|
| T |
7262663 |
gtggtcagcaaatgcgtaggcatctgagcgacagatgacaaatgtctgggaacatcctgtacatagaaaagctgcctctttacccgct |
7262576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 294
Target Start/End: Original strand, 33522707 - 33522971
Alignment:
| Q |
29 |
acagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaat |
128 |
Q |
| |
|
|||||||| | ||||||| || ||| ||||| ||||| ||| ||||||| ||||||||| |||||||||| ||||||||||||||||||| || ||||| |
|
|
| T |
33522707 |
acagtggtcatcaactgcatatgcatctgagcgacatatgacagatgtctaggaacgtccggtacaaaggaaaactgcctctttacccgctaagttaaat |
33522806 |
T |
|
| Q |
129 |
gacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaa-tggatgcacgtctatgtgatcaccataagtagaaaacc |
227 |
Q |
| |
|
||||||||||| | ||||||||| |||| ||||||||||||||||||||| ||| |||||| ||| |||| ||| ||||||||||||||||| |||||| |
|
|
| T |
33522807 |
gacggtacaccttatccttcccgcacatcagccatcccgagtaagtgcacagaaactgaaagtgg--gcacttctctgtgatcaccataagtacaaaacc |
33522904 |
T |
|
| Q |
228 |
tgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
|||||||||||||||| ||||||||| | | ||||| |||| ||| ||||| ||||||| ||||||| |
|
|
| T |
33522905 |
tgacgtcatccacctctaagcgatccagccgtaagcagtaacggtgcacatatttatgccctctgct |
33522971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 44 - 279
Target Start/End: Complemental strand, 5620033 - 5619798
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
|||||||||| ||||| |||| ||| |||||||||||||| || |||||| || | | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5620033 |
tgcgtaggcatctgagcgacagatgacggatgtctgggaacatcatgtacatagaaaagatgcctctttacccactcaggtaaatgacggtacaccctct |
5619934 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
|||||||| |||| |||||| ||||||||||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5619933 |
ccttcccgcacatcagccattccgagtaagtgacaataagctgaaaaggatgtatctctctgtgatcaccataagtagaaaacctgacgtcatccacctc |
5619834 |
T |
|
| Q |
244 |
caagcgatcctggcataagcggtaatggtacacatc |
279 |
Q |
| |
|
|| ||||| | |||||||||||||| |||||| |
|
|
| T |
5619833 |
taaacgatcaagcagtaagcggtaatggtgcacatc |
5619798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 28 - 294
Target Start/End: Original strand, 19269146 - 19269412
Alignment:
| Q |
28 |
cacagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaa |
127 |
Q |
| |
|
||||||| ||||||||| |||||||| ||||| ||| ||| |||||| |||||||||| |||||||| |||||||||| |||||||||||||||| |
|
|
| T |
19269146 |
cacagtgtttagcaactacgtaggcatctgagctacagatgacggatgtatgggaacgtcttgtacaaactcaaactgcctctatacccgctcaggtaaa |
19269245 |
T |
|
| Q |
128 |
tgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacc |
227 |
Q |
| |
|
||||||||||||||||| |||| | |||| | ||||||||||||||||||| ||||||||| || |||| || | ||||||||||||||| |||||| |
|
|
| T |
19269246 |
tgacggtacaccctctcattcctgcacatcatccatcccgagtaagtgcacagaagctgaacagggcgcactcctctatgatcaccataagtacaaaacc |
19269345 |
T |
|
| Q |
228 |
tgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
| || |||| |||||| |||||||| | |||||||||||||||| || ||| |||| | ||||||| |
|
|
| T |
19269346 |
tcacatcattcacctctaagcgatcaagccataagcggtaatggtgcatatcattattccctctgct |
19269412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 47 - 285
Target Start/End: Complemental strand, 10554320 - 10554086
Alignment:
| Q |
47 |
gtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctcct |
146 |
Q |
| |
|
|||||||||| || |||| ||| |||||||||||||| || |||||| || | | ||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
10554320 |
gtaggcaccttagcgacagatgaaggatgtctgggaacatcttgtacatagaaaagttgcctctttacccgctcgggtaa----cggtacaccctctcct |
10554225 |
T |
|
| Q |
147 |
tcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaa |
246 |
Q |
| |
|
||||| ||| |||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10554224 |
tcccgcacaccagccatcccgagtaagtgacaataagctggaatgggtgcacgtctctgtgatcaccataagtagaaaacctgacgtcatccaccttcaa |
10554125 |
T |
|
| Q |
247 |
gcgatcctggcataagcggtaatggtacacatctttatg |
285 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||||||||| |
|
|
| T |
10554124 |
gcgatccaggcgtaagcggtaatggtgcacatctttatg |
10554086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 44 - 279
Target Start/End: Original strand, 46526824 - 46527059
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
|||||||||||||||| |||| ||| |||||||||| ||| || |||||| || | | ||| |||||||||||||||||||||||||||||||| | | |
|
|
| T |
46526824 |
tgcgtaggcacctgagcgacagatgacggatgtctggaaacatcttgtacatagaaaagttgcatctttacccgctcaggtaaatgacggtacaccatat |
46526923 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
|||||||| |||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
46526924 |
ccttcccgcacatcagccatcccgagtaagtgacaataagctgaaatggatgcacgactctgtgatcaccataagtagaaaatctgacgtcatccaccta |
46527023 |
T |
|
| Q |
244 |
caagcgatcctggcataagcggtaatggtacacatc |
279 |
Q |
| |
|
|||||||| | |||||| |||||||||||||| |
|
|
| T |
46527024 |
taagcgatcaagcagtaagcgataatggtacacatc |
46527059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 48 - 291
Target Start/End: Original strand, 11405494 - 11405736
Alignment:
| Q |
48 |
taggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctcctt |
147 |
Q |
| |
|
|||||| || ||||| |||||| ||||||||||| | || ||||| |||| |||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11405494 |
taggcatctcagggatatctgacggatgtctggggatgtactgtataaagtcaaacttcctctttaccctctcaggtaaatgacggtacaccctctccta |
11405593 |
T |
|
| Q |
148 |
cccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaag |
247 |
Q |
| |
|
|||| |||| ||||||| ||||||||||||| |||||||||| || ||| ||| ||||||||||||||||||||||||| | | ||||||||| ||| |
|
|
| T |
11405594 |
cccgcacatcagccatctcgagtaagtgcacagaagctgaaaagggcacacttctctgtgatcaccataagtagaaaacctcaaattatccacctctaag |
11405693 |
T |
|
| Q |
248 |
cgatcctggcataagcggtaatggtacacatctttatgctctct |
291 |
Q |
| |
|
|||| || || |||||||||||| | ||||||| ||||| |||| |
|
|
| T |
11405694 |
cgat-ctagcgtaagcggtaatgttgcacatctatatgccctct |
11405736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 286
Target Start/End: Original strand, 6321254 - 6321495
Alignment:
| Q |
44 |
tgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctct |
143 |
Q |
| |
|
||||||||||||| || |||| ||| ||||||||||||| || |||||| || | | |||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
6321254 |
tgcgtaggcaccttagcgacagatgacagatgtctgggaacatcttgtacatagaaaaggtgcctctttacctgttcaggtaaatgacggtacaccctct |
6321353 |
T |
|
| Q |
144 |
ccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctc |
243 |
Q |
| |
|
||||| || |||| |||||||||||||| ||| |||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
6321354 |
ccttctcgcacatcagccatcccgagtacgtgacaataagctgaaatgg-tgctcgtctctgtgatcaccataagtagaaaacttgacgtcatccacctc |
6321452 |
T |
|
| Q |
244 |
caagcgatcctggcataagcggtaatggtacacatctttatgc |
286 |
Q |
| |
|
|||||||| | |||||||||||||| |||||| |||||| |
|
|
| T |
6321453 |
taagcgatcaagcagtaagcggtaatggtgcacatcattatgc |
6321495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 279
Target Start/End: Complemental strand, 41964057 - 41963809
Alignment:
| Q |
32 |
gtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgac |
131 |
Q |
| |
|
||||| ||||| || ||||||||||||| |||| ||| |||||||| |||| ||||||||| || | ||| |||||||||||||||||||||||||| |
|
|
| T |
41964057 |
gtggtcagcaaatgtgtaggcacctgagcgacagatgacagatgtctgtgaacatcctgtacatagaaacactacctctttacccgctcaggtaaatgac |
41963958 |
T |
|
| Q |
132 |
ggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctg-aaatggatgcacgtctatgtgatcaccataagtagaaaacctga |
230 |
Q |
| |
|
|||||||||||||||||| | |||| |||||||||||||||||| |||||| ||| | | | | ||| ||| |||||||||||||||||| |||| |
|
|
| T |
41963957 |
ggtacaccctctccttcctgcacatcagccatcccgagtaagtgacaataagctgaaaaagaacgtatctctctgttatcaccataagtagaaaatctga |
41963858 |
T |
|
| Q |
231 |
cgtcatccacctccaagcgatcctggcataagcggtaatggtacacatc |
279 |
Q |
| |
|
||||||||||||| |||||||| | |||||||||||||| |||||| |
|
|
| T |
41963857 |
cgtcatccacctctaagcgatcaagcagtaagcggtaatggtgcacatc |
41963809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 28507865 - 28507941
Alignment:
| Q |
101 |
aactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgca |
177 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||||||||| | || ||||||| ||||||||||| |
|
|
| T |
28507865 |
aactgcctcttcacccgcttaggtaaatgacggtacaccctctccttcccgcaaatcagccatcttgagtaagtgca |
28507941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 11382124 - 11382228
Alignment:
| Q |
48 |
taggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctcctt |
147 |
Q |
| |
|
|||||| || |||||||||||| ||||||||||| | || | || |||| ||| |||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
11382124 |
taggcatctcagggacatctgacggatgtctggggatgtaccttataaagtcaaacggcctctttaccctctcaggtaaatgacgatacaccctctcctt |
11382223 |
T |
|
| Q |
148 |
cccga |
152 |
Q |
| |
|
||||| |
|
|
| T |
11382224 |
cccga |
11382228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 3939586 - 3939536
Alignment:
| Q |
101 |
aactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccg |
151 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3939586 |
aactgcctcttaacccgctcaggtaaatgacgatacaccctctccttcccg |
3939536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 11382223 - 11382288
Alignment:
| Q |
163 |
tcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacct |
228 |
Q |
| |
|
|||||||||||||||| |||||||||| || ||| ||| ||||||||||||||||||||||||| |
|
|
| T |
11382223 |
tcccgagtaagtgcacagaagctgaaaagggcacacttctctgtgatcaccataagtagaaaacct |
11382288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 104; Significance: 7e-52; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 279
Target Start/End: Original strand, 39389186 - 39389433
Alignment:
| Q |
32 |
gtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgac |
131 |
Q |
| |
|
||||| ||||| |||||||||||||||| |||| ||| |||||||||||||| ||||||||| || | | ||||||||||||| | ||||||||||||| |
|
|
| T |
39389186 |
gtggtcagcaaatgcgtaggcacctgagcgacagatgacggatgtctgggaacatcctgtacatagaaaagctgcctctttacctgttcaggtaaatgac |
39389285 |
T |
|
| Q |
132 |
ggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgac |
231 |
Q |
| |
|
| |||| ||||||||||||| |||| |||||||||||||||||| ||||||||| || || | ||| |||||||||||||| ||||||||||||| |
|
|
| T |
39389286 |
gctacatcctctccttcccgcacatcagccatcccgagtaagtgacaataagctgaaaagggtgtatctctctgtgatcaccataactagaaaacctgac |
39389385 |
T |
|
| Q |
232 |
gtcatccacctccaagcgatcctggcataagcggtaatggtacacatc |
279 |
Q |
| |
|
|||||||||||| |||||||| | |||||||||||||| |||||| |
|
|
| T |
39389386 |
gtcatccacctctaagcgatcaagcagtaagcggtaatggtgcacatc |
39389433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 79 - 291
Target Start/End: Original strand, 16357873 - 16358085
Alignment:
| Q |
79 |
gggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcac |
178 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||| | ||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
16357873 |
gggaacgtcctgtagaaagtcaaactgccgctttaccccgttaggtaaatgacggtacaccttctccttcccgcacatcagccatcccgattaagtgcac |
16357972 |
T |
|
| Q |
179 |
ggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacat |
278 |
Q |
| |
|
||||||||| || |||| ||| | |||||| |||||||||||||||| || ||||||||||| ||||||||| | | |||||||||||| | ||||| |
|
|
| T |
16357973 |
ataagctgaaaagggcgcacttctctttgatcatcataagtagaaaacctcacatcatccacctctaagcgatccagccgtaagcggtaatgctgcacat |
16358072 |
T |
|
| Q |
279 |
ctttatgctctct |
291 |
Q |
| |
|
|| ||||| |||| |
|
|
| T |
16358073 |
ctgtatgccctct |
16358085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 294
Target Start/End: Original strand, 12025279 - 12025541
Alignment:
| Q |
32 |
gtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgac |
131 |
Q |
| |
|
||||| ||||| ||||||| || ||||| |||| ||| |||||| ||||||| || |||||| || | | ||||||||||| ||||||||||||||||| |
|
|
| T |
12025279 |
gtggtcagcaaatgcgtagacatctgagcgacagatgacggatgtttgggaacatcatgtacatagaaaagctgcctctttatccgctcaggtaaatgac |
12025378 |
T |
|
| Q |
132 |
ggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgac |
231 |
Q |
| |
|
| |||||||||| ||||||| |||| |||||||||||||||||| ||| ||||| || | | ||| |||||||||||||||||||||||||||| |
|
|
| T |
12025379 |
gatacaccctcttcttcccgcacatcagccatcccgagtaagtgacaataagttgaaaagggcgtatctctctgtgatcaccataagtagaaaacctgac |
12025478 |
T |
|
| Q |
232 |
gtcatccacctccaagcgatcctggcataagcggtaatggtacacatctttatgctctctgct |
294 |
Q |
| |
|
||||||| ||| |||||||| | |||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
12025479 |
gtcatccccctttaagcgatcaagcagtaagcggtaatggtgcacatcagtatgccctctgct |
12025541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 54602988 - 54603118
Alignment:
| Q |
122 |
ggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcacgg-aagctgaaatggatgcacgtctatgtgatcaccataagta |
220 |
Q |
| |
|
|||||| ||||||||||||||| ||||||| |||| ||||||||||||||| | ||| |||||||||||| ||||||||| ||||||||||||| ||| |
|
|
| T |
54602988 |
ggtaaacgacggtacaccctcttcttcccgcacatcagccatcccgagtaaat-cacaataagctgaaatgggtgcacgtctctgtgatcaccatatgta |
54603086 |
T |
|
| Q |
221 |
gaaaacctgacgtcatccacctccaagcgatc |
252 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |
|
|
| T |
54603087 |
gaaaacctgacatcatccacctctaagcgatc |
54603118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0079 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0079
Description:
Target: scaffold0079; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 79 - 291
Target Start/End: Complemental strand, 22865 - 22653
Alignment:
| Q |
79 |
gggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgcac |
178 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||| | ||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
22865 |
gggaacgtcctgtagaaagtcaaactgccgctttaccccgttaggtaaatgacggtacaccttctccttcccgcacatcagccatcccgattaagtgcac |
22766 |
T |
|
| Q |
179 |
ggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatccacctccaagcgatcctggcataagcggtaatggtacacat |
278 |
Q |
| |
|
||||||||| || |||| ||| | |||||| |||||||||||||||| || ||||||||||| ||||||||| | | |||||||||||| | ||||| |
|
|
| T |
22765 |
ataagctgaaaagggcgcacttctctttgatcatcataagtagaaaacctcacatcatccacctctaagcgatccagccgtaagcggtaatgctgcacat |
22666 |
T |
|
| Q |
279 |
ctttatgctctct |
291 |
Q |
| |
|
|| ||||| |||| |
|
|
| T |
22665 |
ctgtatgccctct |
22653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0184 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0184
Description:
Target: scaffold0184; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 18699 - 18811
Alignment:
| Q |
140 |
ctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatcca |
239 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
18699 |
ctctccttcccgcacattagccatcccgagtaagtgcacagaagctgaaatggatgcacgtctctatgatcaccataagtagaaaacctgacgtcatcca |
18798 |
T |
|
| Q |
240 |
cctccaagcgatc |
252 |
Q |
| |
|
|||| ||| |||| |
|
|
| T |
18799 |
cctctaagagatc |
18811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 54145 - 54033
Alignment:
| Q |
140 |
ctctccttcccgaacatgagccatcccgagtaagtgcacggaagctgaaatggatgcacgtctatgtgatcaccataagtagaaaacctgacgtcatcca |
239 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
54145 |
ctctccttcccgcacattagccatcccgagtaagtgcacagaagctgaaatggatgcacgtctctatgatcaccataagtagaaaacctgacgtcatcca |
54046 |
T |
|
| Q |
240 |
cctccaagcgatc |
252 |
Q |
| |
|
|||| ||| |||| |
|
|
| T |
54045 |
cctctaagagatc |
54033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0751 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0751
Description:
Target: scaffold0751; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 1858 - 1783
Alignment:
| Q |
30 |
cagtggttagcaactgcgtaggcacctgagggacatctgatggatgtctgggaacgtcctgtacaaaggataactg |
105 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1858 |
cagtggtcagcaactgcgtaggcacctgagggacatctgacggatgtctgggaacgtcctgtacaaaggataactg |
1783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 63205 - 63277
Alignment:
| Q |
105 |
gcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatgagccatcccgagtaagtgca |
177 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||| ||||||||| | |||| ||||||| ||||||||||| |
|
|
| T |
63205 |
gcctcttcacccgctcaggtaaatgatggtacaccatctccttcctgcacatcagccatcgtgagtaagtgca |
63277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 27152 - 27035
Alignment:
| Q |
58 |
agggacatctgatggatgtctgggaacgtcctgtacaaaggataactgcctctttacccgctcaggtaaatgacggtacaccctctccttcccgaacatg |
157 |
Q |
| |
|
|||||||||||||||||||||||| | || ||| |||| ||||| ||| | ||| || |||||||||||||||||||| | ||||||||| |||| |
|
|
| T |
27152 |
agggacatctgatggatgtctggggatgtaatgtttaaagccaaactggctcgtaacctgcccaggtaaatgacggtacaccttttccttcccgcacata |
27053 |
T |
|
| Q |
158 |
agccatcccgagtaagtg |
175 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
27052 |
agttatcccgagtaagtg |
27035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 1978 times since January 2019
Visitors: 2396