View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0243_high_51 (Length: 266)
Name: NF0243_high_51
Description: NF0243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0243_high_51 |
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Alignment Details
Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 53112360 - 53112530
Alignment:
| Q |
25 |
aggtatataggctacactnnnnnnntgagagcataagaacgattatcgtatcggtgacaatagtctgtttctattcaaaaacattttcagaatggacttt |
124 |
Q |
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|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53112360 |
aggtatataggctacactaaaaaaatgagaacataagaacgattatcgtatcggtgacaatagtctgtttctattcaaaaacattttcagaatggacttt |
53112459 |
T |
|
| Q |
125 |
ttggtctgttactatatatcaaaatagcaacgtaacatacctcacatcagccataacctggactttgaagg |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53112460 |
ttggtctgttactatatatcaaaatagcaacgtaacatacctcacatcagccataacctggactttgaagg |
53112530 |
T |
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