View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0243_high_66 (Length: 251)

Name: NF0243_high_66
Description: NF0243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0243_high_66
NF0243_high_66
[»] chr8 (49 HSPs)
chr8 (12-251)||(9045990-9046234)
chr8 (12-90)||(6849251-6849329)
chr8 (12-95)||(33863238-33863321)
chr8 (12-90)||(14548813-14548891)
chr8 (12-95)||(6004942-6005025)
chr8 (12-95)||(12045643-12045726)
chr8 (12-95)||(32725770-32725853)
chr8 (12-90)||(20852922-20853000)
chr8 (12-95)||(27630895-27630978)
chr8 (12-95)||(31665980-31666063)
chr8 (12-95)||(44380604-44380687)
chr8 (12-90)||(42443107-42443185)
chr8 (12-95)||(42716318-42716401)
chr8 (17-95)||(12697708-12697786)
chr8 (22-88)||(20065621-20065687)
chr8 (12-61)||(9001004-9001053)
chr8 (25-90)||(21273713-21273778)
chr8 (12-96)||(26294186-26294270)
chr8 (12-96)||(26307443-26307527)
chr8 (12-96)||(42012580-42012664)
chr8 (12-95)||(69581-69664)
chr8 (12-95)||(36740312-36740395)
chr8 (12-95)||(39021433-39021516)
chr8 (16-90)||(45504564-45504639)
chr8 (12-90)||(14228710-14228788)
chr8 (12-78)||(30578269-30578335)
chr8 (12-90)||(34494628-34494706)
chr8 (12-90)||(37562131-37562209)
chr8 (40-90)||(38844808-38844858)
chr8 (12-90)||(43873681-43873759)
chr8 (25-95)||(45101394-45101464)
chr8 (54-95)||(28732760-28732801)
chr8 (18-95)||(29910208-29910285)
chr8 (30-70)||(2070958-2070998)
chr8 (16-95)||(2621783-2621863)
chr8 (19-95)||(3893395-3893471)
chr8 (30-90)||(6806911-6806971)
chr8 (52-96)||(8955718-8955762)
chr8 (30-94)||(11089575-11089639)
chr8 (18-102)||(18411291-18411375)
chr8 (49-93)||(20052836-20052880)
chr8 (12-95)||(28473535-28473618)
chr8 (12-95)||(28772113-28772197)
chr8 (30-90)||(36064033-36064093)
chr8 (35-95)||(36497659-36497719)
chr8 (30-86)||(39359743-39359799)
chr8 (21-85)||(40464964-40465028)
chr8 (55-95)||(41675402-41675442)
chr8 (30-90)||(43186299-43186359)
[»] chr7 (56 HSPs)
chr7 (12-88)||(18157175-18157251)
chr7 (12-90)||(9031208-9031286)
chr7 (12-97)||(38023414-38023499)
chr7 (12-90)||(34304668-34304746)
chr7 (16-90)||(43079626-43079700)
chr7 (6-90)||(6655599-6655684)
chr7 (16-95)||(4971288-4971367)
chr7 (12-95)||(47905106-47905189)
chr7 (12-90)||(8061734-8061812)
chr7 (12-86)||(29034108-29034182)
chr7 (12-90)||(30941181-30941259)
chr7 (18-95)||(37392041-37392118)
chr7 (12-95)||(47644703-47644786)
chr7 (12-90)||(17500700-17500778)
chr7 (12-90)||(17552436-17552514)
chr7 (12-90)||(42467207-42467285)
chr7 (30-90)||(33881713-33881773)
chr7 (12-90)||(4678068-4678144)
chr7 (12-95)||(7990077-7990160)
chr7 (12-95)||(16567314-16567397)
chr7 (12-95)||(16598265-16598348)
chr7 (24-95)||(32918982-32919053)
chr7 (12-95)||(36108170-36108253)
chr7 (12-95)||(44187689-44187772)
chr7 (12-90)||(2790180-2790258)
chr7 (12-90)||(19426583-19426661)
chr7 (12-90)||(28081772-28081850)
chr7 (18-92)||(31436420-31436494)
chr7 (12-90)||(33212045-33212123)
chr7 (12-90)||(40693518-40693596)
chr7 (12-90)||(46148169-46148247)
chr7 (13-90)||(45154531-45154607)
chr7 (12-88)||(21588915-21588991)
chr7 (18-90)||(31982060-31982132)
chr7 (19-90)||(22692087-22692158)
chr7 (15-90)||(41798223-41798298)
chr7 (25-95)||(2414075-2414145)
chr7 (12-90)||(7807058-7807136)
chr7 (12-90)||(26153649-26153726)
chr7 (12-90)||(28109960-28110038)
chr7 (12-93)||(30862638-30862717)
chr7 (12-90)||(35590769-35590847)
chr7 (12-90)||(43107613-43107691)
chr7 (25-95)||(47424988-47425058)
chr7 (16-93)||(11604676-11604753)
chr7 (13-89)||(26123370-26123447)
chr7 (52-93)||(27125582-27125623)
chr7 (30-95)||(42060654-42060719)
chr7 (13-90)||(44564714-44564790)
chr7 (18-90)||(2756925-2756997)
chr7 (22-93)||(6269366-6269438)
chr7 (30-90)||(8241044-8241104)
chr7 (30-90)||(10014963-10015023)
chr7 (30-90)||(33050186-33050246)
chr7 (30-102)||(37385241-37385313)
chr7 (31-90)||(46880905-46880965)
[»] chr4 (71 HSPs)
chr4 (12-95)||(54800996-54801079)
chr4 (12-90)||(33438048-33438126)
chr4 (12-90)||(35332709-35332787)
chr4 (30-93)||(925070-925133)
chr4 (12-90)||(24209777-24209855)
chr4 (12-90)||(31804319-31804397)
chr4 (12-95)||(18874912-18874994)
chr4 (12-95)||(23094374-23094457)
chr4 (12-95)||(44272800-44272883)
chr4 (16-95)||(46566927-46567006)
chr4 (16-95)||(55510858-55510936)
chr4 (12-90)||(18880788-18880866)
chr4 (12-90)||(40755924-40756002)
chr4 (25-90)||(10994155-10994220)
chr4 (18-95)||(26739968-26740045)
chr4 (33-90)||(40258208-40258265)
chr4 (30-90)||(20632656-20632716)
chr4 (22-90)||(23220338-23220406)
chr4 (19-95)||(29694050-29694126)
chr4 (30-90)||(45548792-45548852)
chr4 (12-95)||(39449171-39449253)
chr4 (12-95)||(42853937-42854020)
chr4 (16-95)||(44495988-44496067)
chr4 (12-90)||(8680944-8681022)
chr4 (12-90)||(9472503-9472581)
chr4 (12-90)||(29525861-29525939)
chr4 (12-90)||(34259818-34259896)
chr4 (12-94)||(35580125-35580207)
chr4 (20-93)||(34114115-34114188)
chr4 (28-105)||(37869784-37869861)
chr4 (30-90)||(12694436-12694496)
chr4 (30-90)||(18568823-18568883)
chr4 (37-89)||(33484123-33484175)
chr4 (18-90)||(34116536-34116608)
chr4 (14-90)||(40847373-40847449)
chr4 (35-95)||(52487282-52487342)
chr4 (18-89)||(11493190-11493260)
chr4 (24-95)||(36444397-36444468)
chr4 (19-90)||(40308444-40308515)
chr4 (12-95)||(41170771-41170853)
chr4 (33-96)||(43608054-43608117)
chr4 (31-90)||(45779300-45779359)
chr4 (12-95)||(51717272-51717355)
chr4 (12-90)||(1031758-1031836)
chr4 (12-90)||(4514255-4514333)
chr4 (12-90)||(11012144-11012222)
chr4 (25-95)||(35661600-35661670)
chr4 (12-90)||(38160763-38160841)
chr4 (32-90)||(40161712-40161769)
chr4 (12-90)||(44165912-44165990)
chr4 (33-95)||(44170630-44170692)
chr4 (12-90)||(46794491-46794569)
chr4 (12-90)||(46912789-46912867)
chr4 (12-90)||(47540138-47540216)
chr4 (25-90)||(50506396-50506462)
chr4 (12-90)||(52224096-52224174)
chr4 (12-90)||(52456917-52456994)
chr4 (12-90)||(55996425-55996503)
chr4 (24-101)||(4896502-4896579)
chr4 (12-85)||(17805460-17805533)
chr4 (12-69)||(23837090-23837147)
chr4 (18-95)||(48743708-48743785)
chr4 (25-90)||(52392228-52392293)
chr4 (30-90)||(12638828-12638888)
chr4 (30-90)||(13267486-13267546)
chr4 (30-90)||(40721972-40722032)
chr4 (16-95)||(47288080-47288160)
chr4 (54-94)||(48414202-48414242)
chr4 (16-95)||(49584992-49585072)
chr4 (25-105)||(49768872-49768952)
chr4 (30-90)||(55268009-55268069)
[»] chr3 (71 HSPs)
chr3 (12-95)||(35376541-35376624)
chr3 (12-95)||(1901916-1901999)
chr3 (12-95)||(1911362-1911445)
chr3 (12-90)||(462391-462469)
chr3 (12-90)||(1295335-1295413)
chr3 (12-90)||(36869827-36869905)
chr3 (12-90)||(45150256-45150334)
chr3 (14-90)||(43409354-43409430)
chr3 (12-95)||(20215946-20216029)
chr3 (12-95)||(31326708-31326791)
chr3 (12-95)||(47773965-47774048)
chr3 (12-90)||(31176430-31176508)
chr3 (12-90)||(34607910-34607988)
chr3 (22-95)||(34628070-34628143)
chr3 (12-95)||(7867701-7867784)
chr3 (12-95)||(29800539-29800622)
chr3 (12-95)||(47849670-47849753)
chr3 (12-90)||(29705906-29705984)
chr3 (12-90)||(32981111-32981189)
chr3 (25-90)||(9027876-9027941)
chr3 (16-89)||(25959536-25959609)
chr3 (18-90)||(36799401-36799473)
chr3 (30-90)||(40419650-40419710)
chr3 (14-90)||(50294104-50294180)
chr3 (12-95)||(108429-108512)
chr3 (12-91)||(14207377-14207456)
chr3 (12-91)||(14215125-14215204)
chr3 (12-95)||(18181441-18181524)
chr3 (12-95)||(32795828-32795911)
chr3 (12-95)||(45528932-45529015)
chr3 (12-95)||(49196694-49196777)
chr3 (12-90)||(41369600-41369678)
chr3 (18-95)||(7210-7287)
chr3 (22-95)||(27198160-27198233)
chr3 (13-90)||(34271481-34271558)
chr3 (52-89)||(41349008-41349045)
chr3 (25-90)||(51464275-51464340)
chr3 (30-95)||(53932399-53932464)
chr3 (14-90)||(8868875-8868951)
chr3 (22-90)||(20380889-20380957)
chr3 (30-90)||(50652391-50652451)
chr3 (12-106)||(12094379-12094474)
chr3 (35-90)||(20893255-20893310)
chr3 (12-95)||(43499552-43499634)
chr3 (12-95)||(44127182-44127264)
chr3 (12-95)||(52727438-52727521)
chr3 (12-90)||(1834509-1834587)
chr3 (12-90)||(27646501-27646579)
chr3 (12-90)||(28300289-28300367)
chr3 (25-95)||(29222404-29222473)
chr3 (22-95)||(33374490-33374564)
chr3 (12-94)||(34733281-34733363)
chr3 (18-95)||(37035613-37035691)
chr3 (12-90)||(41717266-41717344)
chr3 (12-90)||(43900747-43900825)
chr3 (12-90)||(46315945-46316023)
chr3 (12-90)||(51032614-51032692)
chr3 (35-92)||(1668165-1668222)
chr3 (12-93)||(16139285-16139366)
chr3 (18-95)||(21579112-21579189)
chr3 (54-95)||(33256307-33256348)
chr3 (30-95)||(43176200-43176265)
chr3 (30-90)||(51771447-51771507)
chr3 (22-95)||(55344296-55344369)
chr3 (30-90)||(9582167-9582227)
chr3 (30-90)||(11327111-11327171)
chr3 (39-95)||(12792636-12792692)
chr3 (54-90)||(32622395-32622431)
chr3 (18-90)||(35425668-35425740)
chr3 (12-88)||(41309005-41309081)
chr3 (30-90)||(47141608-47141668)
[»] chr1 (76 HSPs)
chr1 (12-95)||(23554749-23554832)
chr1 (12-95)||(27352628-27352711)
chr1 (18-90)||(45350091-45350163)
chr1 (12-90)||(586902-586980)
chr1 (12-90)||(30530564-30530642)
chr1 (16-90)||(49621366-49621440)
chr1 (12-90)||(3919303-3919381)
chr1 (12-90)||(25988974-25989052)
chr1 (12-90)||(30687055-30687133)
chr1 (12-90)||(32821638-32821716)
chr1 (16-90)||(34941914-34941988)
chr1 (12-90)||(36930744-36930821)
chr1 (12-90)||(50528047-50528125)
chr1 (12-90)||(51168758-51168836)
chr1 (12-89)||(5043096-5043173)
chr1 (12-92)||(8757508-8757588)
chr1 (12-95)||(49596233-49596316)
chr1 (12-90)||(25098778-25098856)
chr1 (16-90)||(40605415-40605489)
chr1 (12-102)||(43755668-43755758)
chr1 (18-95)||(366655-366732)
chr1 (13-90)||(16658441-16658518)
chr1 (13-90)||(32966270-32966347)
chr1 (12-89)||(48325226-48325303)
chr1 (30-90)||(36231714-36231774)
chr1 (14-90)||(42299178-42299254)
chr1 (12-95)||(41885719-41885802)
chr1 (12-95)||(47113272-47113355)
chr1 (12-90)||(18959007-18959085)
chr1 (12-90)||(25702205-25702283)
chr1 (12-90)||(29254056-29254134)
chr1 (12-90)||(34157523-34157600)
chr1 (12-90)||(49425741-49425818)
chr1 (12-90)||(52368672-52368749)
chr1 (25-90)||(30439253-30439318)
chr1 (30-90)||(14247667-14247727)
chr1 (12-90)||(4604534-4604610)
chr1 (12-95)||(11038260-11038343)
chr1 (31-90)||(26101397-26101456)
chr1 (12-95)||(39815344-39815427)
chr1 (12-95)||(40610227-40610310)
chr1 (30-89)||(43056720-43056779)
chr1 (12-95)||(44112452-44112535)
chr1 (12-95)||(45042259-45042342)
chr1 (12-95)||(48872377-48872460)
chr1 (16-90)||(52437497-52437572)
chr1 (12-90)||(1788334-1788412)
chr1 (12-90)||(8464503-8464581)
chr1 (12-90)||(14002732-14002809)
chr1 (12-90)||(19651413-19651491)
chr1 (12-90)||(36794618-36794696)
chr1 (16-90)||(40238441-40238515)
chr1 (25-95)||(40612112-40612182)
chr1 (41-95)||(41608727-41608781)
chr1 (12-90)||(44641893-44641971)
chr1 (12-95)||(44730641-44730725)
chr1 (12-90)||(48576495-48576573)
chr1 (12-90)||(48872941-48873018)
chr1 (12-90)||(51250265-51250343)
chr1 (12-90)||(51339690-51339768)
chr1 (30-95)||(7203852-7203917)
chr1 (30-95)||(11812385-11812450)
chr1 (33-90)||(26501298-26501355)
chr1 (25-90)||(27563487-27563552)
chr1 (30-95)||(29489367-29489432)
chr1 (22-95)||(32216000-32216073)
chr1 (30-95)||(36669378-36669443)
chr1 (25-82)||(37515927-37515984)
chr1 (18-95)||(50226875-50226952)
chr1 (30-87)||(50777431-50777488)
chr1 (19-95)||(11097881-11097957)
chr1 (12-96)||(24158647-24158731)
chr1 (12-72)||(34173598-34173658)
chr1 (67-95)||(39380864-39380892)
chr1 (54-90)||(43145299-43145335)
chr1 (12-95)||(48896666-48896747)
[»] scaffold0184 (1 HSPs)
scaffold0184 (12-90)||(16584-16662)
[»] scaffold0078 (1 HSPs)
scaffold0078 (12-90)||(56182-56260)
[»] chr6 (44 HSPs)
chr6 (12-90)||(16743256-16743334)
chr6 (14-94)||(34490346-34490426)
chr6 (12-95)||(9188934-9189017)
chr6 (12-94)||(16533250-16533331)
chr6 (12-95)||(3088971-3089054)
chr6 (12-95)||(11742972-11743055)
chr6 (12-95)||(12044330-12044413)
chr6 (12-95)||(32729887-32729970)
chr6 (12-95)||(11785353-11785436)
chr6 (12-94)||(21506335-21506417)
chr6 (18-95)||(32253778-32253855)
chr6 (30-90)||(6435039-6435099)
chr6 (14-90)||(30744240-30744316)
chr6 (12-95)||(17417225-17417308)
chr6 (12-95)||(23633313-23633396)
chr6 (24-90)||(9851303-9851369)
chr6 (24-90)||(26094908-26094974)
chr6 (49-90)||(3373776-3373817)
chr6 (25-90)||(10521129-10521194)
chr6 (16-93)||(29197724-29197801)
chr6 (55-94)||(3401083-3401122)
chr6 (12-87)||(7693321-7693396)
chr6 (12-95)||(19789066-19789149)
chr6 (12-95)||(29383555-29383638)
chr6 (16-90)||(8173306-8173380)
chr6 (17-83)||(18272354-18272420)
chr6 (16-90)||(23653887-23653960)
chr6 (24-90)||(25554248-25554314)
chr6 (24-90)||(25995445-25995511)
chr6 (25-95)||(29172988-29173058)
chr6 (12-90)||(30906653-30906731)
chr6 (12-90)||(32457242-32457320)
chr6 (30-95)||(237406-237471)
chr6 (30-95)||(3339507-3339572)
chr6 (18-95)||(3821376-3821453)
chr6 (54-95)||(23775969-23776010)
chr6 (30-95)||(26668494-26668559)
chr6 (30-95)||(28965848-28965913)
chr6 (18-95)||(31480830-31480907)
chr6 (18-95)||(31934153-31934230)
chr6 (54-95)||(32876500-32876541)
chr6 (35-95)||(1434677-1434737)
chr6 (31-95)||(11635615-11635679)
chr6 (12-88)||(21443693-21443769)
[»] chr2 (64 HSPs)
chr2 (15-95)||(15283243-15283323)
chr2 (12-95)||(35792446-35792529)
chr2 (12-90)||(10288153-10288231)
chr2 (12-90)||(13553150-13553228)
chr2 (12-95)||(1052486-1052569)
chr2 (12-95)||(8352833-8352916)
chr2 (15-90)||(30856810-30856885)
chr2 (12-95)||(5167730-5167815)
chr2 (12-90)||(28165132-28165210)
chr2 (16-90)||(27939160-27939235)
chr2 (12-95)||(36132972-36133055)
chr2 (12-90)||(8555281-8555358)
chr2 (12-90)||(21805776-21805854)
chr2 (12-95)||(1889145-1889228)
chr2 (52-95)||(3358720-3358763)
chr2 (16-90)||(21738609-21738684)
chr2 (12-95)||(31296835-31296918)
chr2 (12-95)||(34139028-34139111)
chr2 (12-90)||(2308312-2308390)
chr2 (12-90)||(9695051-9695129)
chr2 (24-90)||(12600051-12600117)
chr2 (12-90)||(15678176-15678253)
chr2 (16-90)||(23358573-23358647)
chr2 (24-90)||(34913095-34913161)
chr2 (25-90)||(3091744-3091809)
chr2 (17-86)||(4842515-4842584)
chr2 (22-95)||(16447246-16447319)
chr2 (18-90)||(3959897-3959969)
chr2 (30-90)||(5962641-5962701)
chr2 (18-90)||(32688540-32688612)
chr2 (55-99)||(33002813-33002857)
chr2 (12-95)||(7497981-7498064)
chr2 (12-90)||(8329870-8329946)
chr2 (16-90)||(12784392-12784467)
chr2 (55-90)||(17267685-17267720)
chr2 (12-95)||(18508076-18508159)
chr2 (54-89)||(41840613-41840648)
chr2 (16-90)||(5361798-5361871)
chr2 (12-90)||(13850174-13850252)
chr2 (16-97)||(24766148-24766230)
chr2 (12-90)||(26321687-26321765)
chr2 (12-90)||(29192641-29192719)
chr2 (12-90)||(34373008-34373086)
chr2 (12-90)||(36587458-36587536)
chr2 (12-90)||(36763514-36763591)
chr2 (20-90)||(39454237-39454307)
chr2 (30-88)||(44018256-44018314)
chr2 (13-90)||(11442675-11442752)
chr2 (54-95)||(19529540-19529581)
chr2 (30-95)||(34144559-34144624)
chr2 (12-97)||(34442109-34442194)
chr2 (30-95)||(35171234-35171299)
chr2 (18-95)||(35965573-35965650)
chr2 (18-95)||(41353493-41353570)
chr2 (30-95)||(44085272-44085337)
chr2 (18-90)||(6365189-6365261)
chr2 (30-90)||(6884913-6884973)
chr2 (18-90)||(13711064-13711136)
chr2 (30-90)||(23048091-23048151)
chr2 (30-90)||(26321873-26321933)
chr2 (18-90)||(31635806-31635878)
chr2 (31-90)||(33030111-33030171)
chr2 (30-90)||(36909851-36909911)
chr2 (30-90)||(44484664-44484724)
[»] chr5 (48 HSPs)
chr5 (12-90)||(15639388-15639466)
chr5 (12-95)||(5698318-5698401)
chr5 (12-95)||(7144575-7144658)
chr5 (12-90)||(36624321-36624399)
chr5 (12-90)||(41460119-41460197)
chr5 (12-90)||(582857-582935)
chr5 (12-90)||(36581455-36581533)
chr5 (13-90)||(28903994-28904071)
chr5 (13-90)||(28940389-28940466)
chr5 (14-95)||(35098724-35098805)
chr5 (12-95)||(18638815-18638898)
chr5 (12-95)||(19376122-19376205)
chr5 (12-95)||(19437255-19437338)
chr5 (12-95)||(29803223-29803306)
chr5 (12-90)||(8787146-8787224)
chr5 (12-90)||(12779596-12779674)
chr5 (12-90)||(17063868-17063946)
chr5 (30-92)||(17489349-17489411)
chr5 (12-90)||(27340872-27340950)
chr5 (12-93)||(3141495-3141576)
chr5 (18-95)||(5996665-5996742)
chr5 (12-89)||(9636148-9636225)
chr5 (18-95)||(38500941-38501018)
chr5 (56-95)||(7927353-7927392)
chr5 (12-95)||(20591464-20591547)
chr5 (12-95)||(20985519-20985602)
chr5 (12-95)||(26660401-26660484)
chr5 (12-95)||(26931993-26932076)
chr5 (12-95)||(34428158-34428241)
chr5 (16-90)||(40829417-40829492)
chr5 (12-90)||(2456029-2456107)
chr5 (12-90)||(11880977-11881055)
chr5 (12-90)||(12718370-12718448)
chr5 (12-90)||(19827364-19827442)
chr5 (12-90)||(31024995-31025073)
chr5 (12-90)||(34381015-34381093)
chr5 (12-90)||(36713168-36713246)
chr5 (12-90)||(39595275-39595353)
chr5 (12-69)||(91239-91296)
chr5 (55-104)||(4434471-4434520)
chr5 (25-90)||(12661950-12662015)
chr5 (30-90)||(2050930-2050990)
chr5 (30-90)||(7077350-7077410)
chr5 (18-90)||(8087802-8087874)
chr5 (30-90)||(19271862-19271922)
chr5 (25-97)||(21353519-21353590)
chr5 (18-90)||(36416058-36416130)
chr5 (30-90)||(39788714-39788774)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-90)||(337121-337199)
[»] scaffold0154 (1 HSPs)
scaffold0154 (12-90)||(4318-4396)
[»] scaffold0121 (1 HSPs)
scaffold0121 (35-90)||(3935-3991)
[»] scaffold0504 (1 HSPs)
scaffold0504 (12-90)||(10725-10803)
[»] scaffold0032 (1 HSPs)
scaffold0032 (12-90)||(17439-17517)
[»] scaffold0002 (1 HSPs)
scaffold0002 (12-90)||(440721-440799)
[»] scaffold0014 (1 HSPs)
scaffold0014 (18-95)||(199264-199341)
[»] scaffold0542 (1 HSPs)
scaffold0542 (54-90)||(3647-3683)
[»] scaffold0204 (1 HSPs)
scaffold0204 (12-95)||(27337-27420)
[»] scaffold0018 (1 HSPs)
scaffold0018 (12-95)||(36000-36083)
[»] scaffold0592 (1 HSPs)
scaffold0592 (25-95)||(908-978)
[»] scaffold0522 (1 HSPs)
scaffold0522 (12-90)||(2494-2572)
[»] scaffold0086 (1 HSPs)
scaffold0086 (14-84)||(17322-17392)
[»] scaffold0020 (1 HSPs)
scaffold0020 (12-90)||(155909-155987)
[»] scaffold0119 (1 HSPs)
scaffold0119 (30-95)||(2234-2299)
[»] scaffold0076 (1 HSPs)
scaffold0076 (12-96)||(11207-11289)
[»] scaffold0041 (1 HSPs)
scaffold0041 (18-94)||(34407-34483)
[»] scaffold0011 (1 HSPs)
scaffold0011 (30-90)||(18598-18658)


Alignment Details
Target: chr8 (Bit Score: 181; Significance: 7e-98; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 12 - 251
Target Start/End: Complemental strand, 9046234 - 9045990
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataa-----atatcatttatcttgtataaataaa 106  Q
    ||||||||| ||||||| |||| ||| ||||||||| || ||||||||||||||||||||||||||||||     ||||||||| |||| ||||||||||    
T  9046234 agagagtaataatataatgtgaatataagagataaatttgtctaaaaattatcacaaaatggttgtataatataaatatcatttttcttctataaataaa 9046135  T
Q  107 tacattactcaattaatggtgaccacttctactacttcaagaggttcaactactcatgatgtactcagccaaagactggtcaaactgtcctagattctct 206  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9046134 tatattactcaactaatggtgaccacttctactacttcaagaggttcaactactcatgatgtactcacccaaagactggtcaaactgtcctagattctct 9046035  T
Q  207 tgggacttcacttatattacttgcttttatatgcgggttgcttgt 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9046034 tgggacttcacttatattacttgcttttatatgcgggttgcttgt 9045990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 6849251 - 6849329
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||| ||||||| || ||||||| || ||||||||||||||||||||||||||||    
T  6849251 agagagtaagaatataatgtgagtatgaaagataaagttgtctaaaagttgtcacaaaatggttgtataaatatcattt 6849329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 33863238 - 33863321
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||||||||||| || |||||||||||||| |||||||||||| | ||||||||| ||||    
T  33863238 agagaataagaatataatgtgagtatgagagataaaattgtctaaaaattatcagaaaatggttgtacatatatcatttctctt 33863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 14548813 - 14548891
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||||||| | |||||||||||| |||||||||||    
T  14548813 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcattt 14548891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 6005025 - 6004942
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||||| ||||||| | |||||| ||||||||||| ||||    
T  6005025 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtagttgtacaaatatcatttctctt 6004942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 12045643 - 12045726
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || |||| ||||||||||| ||||||||||| ||||    
T  12045643 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaatatcatttctctt 12045726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 32725770 - 32725853
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||||| | |||||||||||||| ||| || |||||||||||||||||| |||||||| ||||||||||| ||||    
T  32725770 agagagtaaaaatatgatgtgagtatgagagaaaaaattgtctaaaaattatcacaaagtggttgtacaaatatcatttctctt 32725853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 20853000 - 20852922
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||| | ||| || |||||||||||||| |||||||||||| |||||||||||    
T  20853000 agagaataagaatataacgtgagtatgagaaagaaagttgtctaaaaattatcataaaatggttgtacaaatatcattt 20852922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 27630978 - 27630895
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||||||| ||| || || ||||||| ||| ||||||| |||| ||||||||||| ||||    
T  27630978 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaaattgtcataaaatggatgtacaaatatcatttctctt 27630895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 31665980 - 31666063
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||| |||||||||| | || ||||||| | ||| || |||||||||| |||||||||||||||| | ||||||||||||||    
T  31665980 agagagcaagaatataatgcgaatatgagaaagaaagttgtctaaaaattgtcacaaaatggttgtacatatatcatttatctt 31666063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 44380604 - 44380687
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| ||||||||| |||||||||||||| ||| || | ||||  || |||||||||||||||| ||||||||||| ||||    
T  44380604 agagagtcagaatataatgtgagtatgagagagaaagttgtttaaaggttgtcacaaaatggttgtacaaatatcatttctctt 44380687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 42443185 - 42443107
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| ||||||| |||||||||||||| ||| || ||||||| || |||| ||||| ||||| |||||||||||    
T  42443185 agagagtaataatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatgattgtacaaatatcattt 42443107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 42716401 - 42716318
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||| |||| |||||||||||||| ||| || || ||||||||| | ||| |||||||| ||||||||||| ||||    
T  42716401 agagaataagaagataatgtgagtatgagagagaaagttgtcaaaaaattatgaaaaagtggttgtacaaatatcatttctctt 42716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 12697708 - 12697786
Alignment:
Q  17 gtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| |||| |||||| ||||||| ||| || |  ||||||||||| ||||| |||||||||||||||||| ||||    
T  12697708 gtaagaacataatgtgagtgtgagagagaaagttgttcaaaaattatcataaaatagttgtataaatatcatttttctt 12697786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 20065687 - 20065621
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcat 88  Q
    ||||| |||| ||||||||||| ||| || || |||||||||||||||||  |||||||||||||||    
T  20065687 aatatcaagtaagtatgagagagaaaattgtcaaaaaattatcacaaaattattgtataaatatcat 20065621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 9001004 - 9001053
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaatt 61  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||||||    
T  9001004 agagagtaagaatataatgtgagtatgagagaaaaaattgtctaaaaatt 9001053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 21273713 - 21273778
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||||||| || || | || || |||||||||||||||| |||||||||||    
T  21273713 ataatgtgagtatgagagataaaattgtcaagaagttgtcacaaaatggttgtacaaatatcattt 21273778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 26294270 - 26294186
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttg 96  Q
    ||||| ||||| ||||| ||||||||| |||| ||| || || |||| || ||||||||||||||||  |||||||||| |||||    
T  26294270 agagaataagagtataatgtgagtatgtgagagaaaattgtcaaaaagttgtcacaaaatggttgtaccaatatcatttctcttg 26294186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 26307527 - 26307443
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttg 96  Q
    ||||| ||||| ||||| ||||||||| |||| ||| || || |||| || ||||||||||||||||  |||||||||| |||||    
T  26307527 agagaataagagtataatgtgagtatgtgagagaaaattgtcaaaaagttgtcacaaaatggttgtaccaatatcatttctcttg 26307443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 42012580 - 42012664
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttg 96  Q
    ||||| |||||  |||| |||||||||||||| ||| || || |||| |||||| ||| | |||||||||||||||||| |||||    
T  42012580 agagaataagatgataacgtgagtatgagagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcatttctcttg 42012664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 69581 - 69664
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||||||| ||  |||| |||||  || || |||||||||||||||||| || ||||| ||||||||||| ||||    
T  69581 agagagtaataatataatgtatgtataagagaggaagttgtctaaaaattatcacaaagtgattgtacaaatatcatttctctt 69664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 36740395 - 36740312
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| |||||||  ||| ||||||||  ||| || ||||||||||||||| ||||| ||||| ||||||||||| ||||    
T  36740395 agagaataaaaatataatatgaatatgagagggaaagttgtctaaaaattatcactaaatgattgtacaaatatcatttctctt 36740312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 39021433 - 39021516
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| || |||| |||||||||| ||| | | || || |||| ||||||||||||||||||| ||||||||||| ||||    
T  39021433 agagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaagttatcacaaaatggttgtacaaatatcatttctctt 39021516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 45504639 - 45504564
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatc-taaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| |||||||||| ||| ||| || || ||||||||||| |||||||||| || |||||||||||    
T  45504639 agtaaaaatataatgtgagtatgatagagaaaattttcataaaaattatcccaaaatggttttaaaaatatcattt 45504564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 14228788 - 14228710
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| || | |||||||||||||| ||| || |  |||| |||||||||||| |||||| |||||||||||    
T  14228788 agagaataagaacatcatgtgagtatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcattt 14228710  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 30578335 - 30578269
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgta 78  Q
    ||||||||||||||||| |||||||||||| | ||| || | ||||| || ||| ||||||||||||    
T  30578335 agagagtaagaatataacgtgagtatgagaaagaaagttgtttaaaagttgtcaaaaaatggttgta 30578269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 34494628 - 34494706
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| |||| |||||||||||||| ||| || || ||||||| | | ||||| |||||| |||||||||||    
T  34494628 agagaataagaagataacgtgagtatgagagagaaaattttcaaaaaattgttagaaaatagttgtacaaatatcattt 34494706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 37562131 - 37562209
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||| | | |||||||||||| ||| || ||||||| || ||||| ||| |||||| |||||||||||    
T  37562131 agagaataagaatatcatgcgagtatgagagagaaagttgtctaaaagttgtcacataatagttgtacaaatatcattt 37562209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 38844808 - 38844858
Alignment:
Q  40 gagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| ||| |||||||||| || |||||||||||||||| |||||||||||    
T  38844808 gagagaaagttatctaaaagttgtcacaaaatggttgtacaaatatcattt 38844858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 43873681 - 43873759
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| |||||||||| ||| | | || || ||||||| |||||||||||||||| |||||||||||    
T  43873681 agagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaaattgtcacaaaatggttgtacaaatatcattt 43873759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 45101464 - 45101394
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||| |||||||||||||| ||| || || |||| || ||||||| |||||||| ||||||||||| ||||    
T  45101464 ataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 45101394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 28732801 - 28732760
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||| |||||| ||||||||||||||||| ||||    
T  28732801 taaaaattatcataaaatgattgtataaatatcatttttctt 28732760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 29910208 - 29910285
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||||||||| ||| ||| || || ||||||||| | ||| |||||||  ||||||||||| ||||    
T  29910208 taagaatataatgtgagtatgaaagagaaagttgtcaaaaaattataataaagtggttgtgcaaatatcatttctctt 29910285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 2070998 - 2070958
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaa 70  Q
    |||||||||||||| ||| || |||||||||||||||||||    
T  2070998 gtgagtatgagagagaaagttgtctaaaaattatcacaaaa 2070958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 2621863 - 2621783
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaa-ttatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||| || ||||| ||||||||| || ||  |||| |||||||||| | |||||||||||||||||| ||||    
T  2621863 agtaaaaatataatgtaagtataagagataaagttgtcacaaaagttatcacaaattagttgtataaatatcatttctctt 2621783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 3893395 - 3893471
Alignment:
Q  19 aagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||| ||||| |||||||||||||| ||| || |  ||||||| |  |||||| |||||| ||||||||||||||||    
T  3893395 aagagtataatgtgagtatgagagaaaaagttgttcaaaaattgtaccaaaatagttgtacaaatatcatttatctt 3893471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 6806971 - 6806911
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || | ||||| || |||||||||| ||||| |||||||||||    
T  6806971 gtgagtatgagagaaaaaattgtttaaaagttgtcacaaaatgattgtacaaatatcattt 6806911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 8955718 - 8955762
Alignment:
Q  52 tctaaaaattatcacaaaatggttgtataaatatcatttatcttg 96  Q
    ||||||||||||||||||||| |||| ||||||| |||| |||||    
T  8955718 tctaaaaattatcacaaaatgattgtttaaatattatttctcttg 8955762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 11089639 - 11089575
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatct 94  Q
    |||||| ||||||| ||| || || |||||||||   |||||||||||| |||||||||||||||    
T  11089639 gtgagtgtgagagaaaaagttgtcaaaaaattatagtaaaatggttgtacaaatatcatttatct 11089575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 18411291 - 18411375
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttgtataaa 102  Q
    |||||| |||| || ||||||||||||||| || |  |||| || |  |||||| |||||| |||||||||||||||| ||||||    
T  18411291 taagaacataatgttagtatgagagataaatttgtacaaaagttgtaccaaaattgttgtacaaatatcatttatcttttataaa 18411375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 20052880 - 20052836
Alignment:
Q  49 ttatctaaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    ||||| ||||||||| | |||||||||||| ||||||||||||||    
T  20052880 ttatcaaaaaattataataaaatggttgtacaaatatcatttatc 20052836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 28473535 - 28473618
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaa-tggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||||||| ||| ||||| ||| ||| | |||||| |||||||| ||||||||||| ||||    
T  28473535 agagaataagagtataatgtgagtatgagagagaaagttatcaaaatattgt-acaaaagtggttgtacaaatatcatttctctt 28473618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 28772113 - 28772197
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| |  |||||||| |||||||||| ||| |||||  ||||||| ||| |||||||||||  ||||||||||| ||||    
T  28772113 agagagtaaaatgataaagtgggtatgagagagaaagttatcacaaaaattgtcaaaaaatggttgttcaaatatcatttctctt 28772197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 36064093 - 36064033
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || || |||| || |||||||||| ||||| |||||||||||    
T  36064093 gtgagtatgagagagaaaattgtccaaaagttgtcacaaaatgattgtacaaatatcattt 36064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 36497719 - 36497659
Alignment:
Q  35 tatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||| || ||||||| || ||||||||| |||||| ||||||||||| ||||    
T  36497719 tatgagagagaaagttgtctaaaagttgtcacaaaatagttgtacaaatatcatttctctt 36497659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 39359799 - 39359743
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatc 86  Q
    |||||||||||||| ||| || || ||||||| ||| |||||||||||| |||||||    
T  39359799 gtgagtatgagagagaaaattgtccaaaaattgtcagaaaatggttgtacaaatatc 39359743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 40465028 - 40464964
Alignment:
Q  21 gaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatat 85  Q
    |||||||| |||||||||||||| ||| || || |||| |||||| ||| | |||||||||||||    
T  40465028 gaatataatgtgagtatgagagagaaagttgtcaaaaatttatcataaagtagttgtataaatat 40464964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 41675402 - 41675442
Alignment:
Q  55 aaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||||| ||||| ||||||||||||||||    
T  41675402 aaaaattatcaaaaaatgattgtacaaatatcatttatctt 41675442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 43186359 - 43186299
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || |  |||||||||||||||||  ||||| |||||||||||    
T  43186359 gtgagtatgagagagaaagttgtacaaaaattatcacaaaataattgtacaaatatcattt 43186299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 18157175 - 18157251
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcat 88  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||||||||||||| |||||||| |||||||||    
T  18157175 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaaattatcacaaagtggttgtacaaatatcat 18157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 9031286 - 9031208
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||| | |||||||| ||||| |||||||||||    
T  9031286 agagagtaagaatataacgtgagtatgagagagaaaattatctaaaaattgtaacaaaatgtttgtacaaatatcattt 9031208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 38023414 - 38023499
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttgt 97  Q
    ||||||||| |||| || |||||||||||||| ||| || |||||||||||||||||| |||||||| ||||||||||| ||||||    
T  38023414 agagagtaaaaatagaatgtgagtatgagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctcttgt 38023499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 34304668 - 34304746
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||||| ||| ||||| |||||| |||||||||||    
T  34304668 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaaattgtcaaaaaatagttgtacaaatatcattt 34304746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 43079626 - 43079700
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||| |||||||||||||| ||| || || ||||||||||||||| |||||||| |||||||||||    
T  43079626 agtaagaatataatgtgagtatgagagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcattt 43079700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 6655599 - 6655684
Alignment:
Q  6 aggagcagagagtaagaatataaagtgagtatgagagataaac-ttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||| |||||||||||| |||||||||||||| |||  |||||||||||||||||||||||| || || |||||||||||    
T  6655599 aggaggagagggtaagaatataatgtgagtatgagagaaaaaaattatctaaaaattatcacaaaatgattttacaaatatcattt 6655684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 4971367 - 4971288
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||| |||||||||||||| ||| || | ||||| || |||||||||||||||| ||||||||||| ||||    
T  4971367 agtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcatttctctt 4971288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 47905106 - 47905189
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||| ||||||| ||| || |||||| ||| ||| |||||||||||| ||||||||||| ||||    
T  47905106 agagagtaagaatataatgtgagtgtgagagagaaagttgtctaaatattgtcaaaaaatggttgtacaaatatcatttctctt 47905189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8061734 - 8061812
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||| ||||| ||| ||| |||||||||| || ||| |||||||||||| |||||||||||    
T  8061734 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaatttttcataaaatggttgtagaaatatcattt 8061812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 29034182 - 29034108
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatc 86  Q
    |||| |||||||||||| |||||||||||||| ||| ||||| ||||||| |||||||||| ||||| |||||||    
T  29034182 agagggtaagaatataatgtgagtatgagagagaaaattatcaaaaaattgtcacaaaatgattgtacaaatatc 29034108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 30941259 - 30941181
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||||||  ||||||| ||||| ||| ||||||||||||| | ||||| |||||||| |||||||||||    
T  30941259 agagagtaagaatataatatgagtataagagagaaagttatctaaaaattgttacaaagtggttgtacaaatatcattt 30941181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 37392118 - 37392041
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||||||||||||||||| || | ||||| || ||| |||||||||||| ||||||||||| ||||    
T  37392118 taagaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatggttgtacaaatatcatttctctt 37392041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 47644786 - 47644703
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| ||||||| |||||||||||||| ||| || || ||||||||| | ||| |||||||| ||||||||||||||||    
T  47644786 agagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaaattataataaagtggttgtacaaatatcatttatctt 47644703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 17500778 - 17500700
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||||||| || || |||| |||| | ||| |||||||| |||||||||||    
T  17500778 agagaataagaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcattt 17500700  T

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Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 17552436 - 17552514
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||||||| || || |||| |||| | ||| |||||||| |||||||||||    
T  17552436 agagaataagaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcattt 17552514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 42467285 - 42467207
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| ||||||| ||||||||||| || |||  | |||||||||||| | |||||||||||| |||||||||||    
T  42467285 agagagtaaaaatataatgtgagtatgagggagaaagctgtctaaaaattattaaaaaatggttgtacaaatatcattt 42467207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 33881713 - 33881773
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| ||||| |||| ||||  |||||||||||||||||||||||||    
T  33881713 gtgagtatgagagagaaagttatcaaaaagttataccaaaatggttgtataaatatcattt 33881773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 4678144 - 4678068
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || ||| ||||  |||||| |||||||||||    
T  4678144 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttgtcaaaaaa--gttgtacaaatatcattt 4678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 7990160 - 7990077
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||| ||||| ||| ||||| ||||||||||| ||||| | |||| ||||||||||| ||||    
T  7990160 agagaataagagtataatgtgagtataagagagaaaattatcaaaaaattatcataaaatagatgtacaaatatcatttctctt 7990077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 16567397 - 16567314
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||| ||| ||| || || |||| |||| | |||||||||||| ||||||||||| ||||    
T  16567397 agagaataagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctctt 16567314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 16598265 - 16598348
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||| ||| ||| || || |||| |||| | |||||||||||| ||||||||||| ||||    
T  16598265 agagaataagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctctt 16598348  T

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Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 32918982 - 32919053
Alignment:
Q  24 tataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||||||||| ||||  || || ||||||| |||||||||| ||||||||||||||||| ||||    
T  32918982 tataatgtgagtatgagaaataatgttgtcaaaaaattgtcacaaaatgattgtataaatatcatttctctt 32919053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 36108253 - 36108170
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| ||||||| |||||||||||||| ||| ||||  ||||||| |  ||||||||||||| ||||||||||| ||||    
T  36108253 agagaataaaaatataatgtgagtatgagagagaaagttataaaaaaattgtatcaaaatggttgtacaaatatcatttctctt 36108170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 44187772 - 44187689
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||| ||||| || | ||||| || ||| |||||| ||||| | ||||||||| ||||    
T  44187772 agagagtaagaatataatgtgagtatgagaaataaagttgtttaaaagttgtcaaaaaatgattgtacacatatcatttctctt 44187689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 2790258 - 2790180
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| ||||| |||||||||||||| ||| || || ||||||| | ||||| |||||||| |||||||||||    
T  2790258 agagaataagagtataatgtgagtatgagagagaaagttgtcaaaaaattgttacaaagtggttgtacaaatatcattt 2790180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 19426661 - 19426583
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||||||||||||| ||| || || |||| || |||||||||||||||| |||||||||||    
T  19426661 agagaataagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcattt 19426583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 28081772 - 28081850
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| |||||||||||||| ||| || |  ||||||||| |||||||||||||| |||||||||||    
T  28081772 agagaataacaagataatgtgagtatgagagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcattt 28081850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 31436494 - 31436420
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttat 92  Q
    ||||||||||| || ||||||||||| ||| || || |||| || ||| |||||||||||| |||||||||||||    
T  31436494 taagaatataatgtaagtatgagagaaaaaattgtcaaaaagttgtcaaaaaatggttgtacaaatatcatttat 31436420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 33212123 - 33212045
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| |||||||||||||||||| || || ||||||| | | |||||||||||| |||||||||||    
T  33212123 agagaataaaaagataatgtgagtatgagagataaagttgtcaaaaaattgttagaaaatggttgtacaaatatcattt 33212045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 40693518 - 40693596
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| ||||||| || ||||||||||| ||| || ||||||| || ||| ||||| |||||| |||||||||||    
T  40693518 agagagtaaaaatataatgtaagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 40693596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 46148247 - 46148169
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| ||||||||||||||||||||| | | ||| || ||| |||||| || || |||||||||||    
T  46148247 agagaataagaatataatgtgagtatgagagataaacttgtttcaaagttgtcaaaaaatgattttacaaatatcattt 46148169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 45154531 - 45154607
Alignment:
Q  13 gagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| ||||||||||| |||||||||| ||| ||| |||||||||| || ||| ||||| |||||| |||||||||||    
T  45154531 gagattaagaatataatgtgagtatgaaagagaaagttatctaaaagttgtca-aaaatagttgtacaaatatcattt 45154607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 21588915 - 21588991
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcat 88  Q
    ||||||||| ||||||| || ||||||||||| ||| |||||||||| |||| | |||||  ||||| |||||||||    
T  21588915 agagagtaaaaatataatgtaagtatgagagagaaaattatctaaaagttattaaaaaataattgtacaaatatcat 21588991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 31982132 - 31982060
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| |||||||||||||  ||| ||||| ||| ||| ||||||| |||||||| |||||||||||    
T  31982132 taagagtataatgtgagtatgagagcaaaagttatcaaaagattgtcacaaagtggttgtacaaatatcattt 31982060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 22692158 - 22692087
Alignment:
Q  19 aagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||| || ||||||||||| ||| || | ||||| || ||| |||||||||||| |||||||||||    
T  22692158 aagaatataatgtaagtatgagagagaaaattgtttaaaagttgtcataaaatggttgtacaaatatcattt 22692087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 41798298 - 41798223
Alignment:
Q  15 gagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||| ||||||| || ||||||||||| ||| || ||||||||||||   |||||  |||||||||||||||||    
T  41798298 gagtaaaaatataatgtaagtatgagagagaaaattgtctaaaaattatttaaaaattattgtataaatatcattt 41798223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 2414145 - 2414075
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||| |||||||||||| ||||| || || ||||||| |||| || | |||||||||||||||||| ||||    
T  2414145 ataatgtgagtatgagatataaagttgtcaaaaaattgtcacgaagtagttgtataaatatcatttctctt 2414075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 7807136 - 7807058
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||||||||||||| ||| || |  |||| |||||||||||||| |||| |||||||||||    
T  7807136 agagaataagagaataatgtgagtatgagagaaaaagttgtaaaaaatttatcacaaaatgggtgtacaaatatcattt 7807058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 26153726 - 26153649
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || || |||| || ||| ||||| |||||| |||||||||||    
T  26153726 agagaataagaatataatgtgagtatgagagagaaaattgtc-aaaagttgtcataaaatagttgtacaaatatcattt 26153649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 28110038 - 28109960
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| ||||||| ||||||||| |||||||| || | ||||| || ||| ||| |||||||| |||||||||||    
T  28110038 agagaataaaaatataatgtgagtatgtgagataaagttgtttaaaagttgtcaaaaagtggttgtacaaatatcattt 28109960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 30862717 - 30862638
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    ||||| ||||| ||||| |||||||||||||| ||  || || ||||||||||| ||| |||| ||| ||||||||||||||    
T  30862717 agagaataagagtataatgtgagtatgagagaaaa--ttgtcaaaaaattatcataaagtggtagtacaaatatcatttatc 30862638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 35590769 - 35590847
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| |||||||||||||| ||| ||||||||||||| |   |||||||||||| |||||| ||||    
T  35590769 agagaataataacataatgtgagtatgagagagaaaattatctaaaaattgtacaaaaatggttgtacaaatatgattt 35590847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 43107691 - 43107613
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| ||||||| |||||||||||||||||| || ||||||| || |||  || || || || |||||||||||    
T  43107691 agagagtaaaaatataatgtgagtatgagagataaagttgtctaaaagttgtcatgaagtgattttacaaatatcattt 43107613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 47424988 - 47425058
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||| |||||||||||||| ||| || || ||| ||||||||||| ||| | || ||||||||||||||||    
T  47424988 ataatgtgagtatgagagagaaaattgtcaaaagattatcacaaagtggatatacaaatatcatttatctt 47425058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 11604676 - 11604753
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    |||||||||| || | ||| |||||||||||| || |  ||||||||||| |||||  ||||| ||||||||||||||    
T  11604676 agtaagaatacaaggagagaatgagagataaaattgttcaaaaattatcataaaatttttgtacaaatatcatttatc 11604753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 26123447 - 26123370
Alignment:
Q  13 gagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatc-acaaaatggttgtataaatatcatt 89  Q
    |||||||||||||||| |||| ||||||||| ||| || ||||||| || || | ||||| |||||| ||||||||||    
T  26123447 gagagtaagaatataatgtgaatatgagagagaaagttgtctaaaagttgtcaaaaaaatagttgtacaaatatcatt 26123370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 27125582 - 27125623
Alignment:
Q  52 tctaaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    |||||||||||| ||||||| |||||| ||||||||||||||    
T  27125582 tctaaaaattattacaaaatagttgtagaaatatcatttatc 27125623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 42060719 - 42060654
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| ||| || || |||| ||||  ||||||||||||| ||||||||||| ||||    
T  42060719 gtgagtatgagagagaaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttctctt 42060654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 44564714 - 44564790
Alignment:
Q  13 gagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| ||||||||||| |||||||||| | | ||| || |||||||||| ||| ||||| |||||| |||||||||||    
T  44564714 gagattaagaatataatgtgagtatgaaataaaaagttgtctaaaaattgtca-aaaatagttgtacaaatatcattt 44564790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 2756925 - 2756997
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||| ||| |||||||||||||||||| || || |||| || | | ||| |||||||| |||||||||||    
T  2756925 taagaatgtaatgtgagtatgagagataaagttgtcaaaaagttgttagaaattggttgtacaaatatcattt 2756997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 6269438 - 6269366
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    ||||||| |||||||||||||| ||| || ||  ||||||| | | |||||||||||| ||||||||||||||    
T  6269438 aatataatgtgagtatgagagagaaagttgtcacaaaaattgttataaaatggttgtacaaatatcatttatc 6269366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 8241044 - 8241104
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||| ||||| ||| ||||||| ||||||||| ||||| ||| | ||||||||||||    
T  8241044 gtgagtattagagagaaagttatctacaaattatcataaaatagttatttaaatatcattt 8241104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 10014963 - 10015023
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || || ||| ||||||| ||||| |||||| |||||||||||    
T  10014963 gtgagtatgagagaaaaagttgtccaaatattatcataaaatagttgtacaaatatcattt 10015023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 33050246 - 33050186
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || |  |||| || |||||||||||||||| |||||||||||    
T  33050246 gtgagtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcattt 33050186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 37385241 - 37385313
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttgtataaa 102  Q
    |||||||||||||| ||| || |  |||| || ||| ||||| |||||| |||||||||||||||| ||||||    
T  37385241 gtgagtatgagagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcatttatcttttataaa 37385313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 46880965 - 46880905
Alignment:
Q  31 tgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||| ||| |||||  ||||||||||| |||||||||||  |||||||||||    
T  46880965 tgagtatgagagagaaaattatcgcaaaaattatcaaaaaatggttgttcaaatatcattt 46880905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 54801079 - 54800996
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||| ||||||| || ||||||| |||||||||| |||||||| ||||||||||| ||||    
T  54801079 agagagtaagaatataatgtgagtatgaaagataaaattgtctaaaagttatcacaaagtggttgtacaaatatcatttctctt 54800996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 33438126 - 33438048
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||| ||||||| ||||| || |||||||||||    
T  33438126 agagagtaagaatataatgtgagtatgagagagaaaattatctaaaaattgtcacaaattggttttacaaatatcattt 33438048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 35332787 - 35332709
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| ||||| ||||||||||| ||| |||||||| |||||||||||    
T  35332787 agagaataagaatataatgtgagtatgagagagaaagttatcaaaaaattatcataaagtggttgtacaaatatcattt 35332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 925070 - 925133
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    |||||||||||||| ||| || ||||||| || |||||||||||||||||||||||||||||||    
T  925070 gtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtataaatatcatttatc 925133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 24209777 - 24209855
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| |  |||||||||||||| ||| || |||||||||| ||||||| |||| |||||||||||||||    
T  24209777 agagagtaagaatagagtgtgagtatgagagagaaaattgtctaaaaattgtcacaaagtggtcgtataaatatcattt 24209855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 31804319 - 31804397
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||  ||||||||||||| ||| ||||| ||||||||||||||| || ||||| |||||||||||    
T  31804319 agagaataagaatataatctgagtatgagagagaaaattatcaaaaaattatcacaaagtgattgtacaaatatcattt 31804397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 18874912 - 18874994
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || ||| ||||| |||||| ||||||||||| ||||    
T  18874912 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaat-gttgtacaaatatcatttctctt 18874994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 23094457 - 23094374
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| || | ||||| ||| ||| || ||||||| ||||||||||||| ||||| ||||||||||| ||||    
T  23094457 agagagtaagaatataatgtaaatatgaaagagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcatttctctt 23094374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 44272800 - 44272883
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || | ||||| || ||| ||||| |||||| ||||||||||| ||||    
T  44272800 agagagtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 44272883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 46567006 - 46566927
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||| |||||||||||||| ||| || ||||||| || ||||||| ||| |||| ||||||||||| ||||    
T  46567006 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggatgtacaaatatcatttctctt 46566927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 55510936 - 55510858
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||| || |||||||||||||||||| ||||||||||||| |||  ||||| ||||| ||||||||||| ||||    
T  55510936 agtaagaataaaatgtgagtatgagagataaagttatctaaaaattgtca-taaatgattgtacaaatatcatttctctt 55510858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 18880866 - 18880788
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || ||||||| |||||| ||||| |||||| | |||||||||    
T  18880866 agagaataagaatataatgtgagtatgagagagaaaattgtctaaaagttatcataaaattgttgtacatatatcattt 18880788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 40756002 - 40755924
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| |||| |||||||||||||| ||| ||||| ||||||| | | |||||||||||| |||||||||||    
T  40756002 agagaataagaagataatgtgagtatgagagagaaaattatcaaaaaattgttagaaaatggttgtacaaatatcattt 40755924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 10994155 - 10994220
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||||||| || || ||| ||| |||||||||||||||| |||||||||||    
T  10994155 ataatgtgagtatgagagataaagttgtcaaaagattgtcacaaaatggttgtacaaatatcattt 10994220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 26740045 - 26739968
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||| |||| ||||| |||| ||||||  || |  |||||||||||||||||||||||||||||||| ||||||||    
T  26740045 taagaacataatgtgagaatgaaagataacgttgttcaaaaattatcacaaaatggttgtataaatatcgtttatctt 26739968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 40258265 - 40258208
Alignment:
Q  33 agtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||| ||| ||||  ||||||||||| ||||||||||||||||||||||||    
T  40258265 agtatgagagagaaagttattcaaaaattatcataaaatggttgtataaatatcattt 40258208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 20632656 - 20632716
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| ||||  |||| |||||| ||||||||||||||||||||||||    
T  20632656 gtgagtatgagagagaaagttatgcaaaagttatcaaaaaatggttgtataaatatcattt 20632716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 23220406 - 23220338
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||| |||||||| ||||||||| |||| ||||| || ||| |||||||||||| |||||||||||    
T  23220406 aatataatgtgagtataagagataaagttatttaaaagttgtcaaaaaatggttgtacaaatatcattt 23220338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 29694050 - 29694126
Alignment:
Q  19 aagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||| || ||||||| ||| ||| |||||||||||||||||||||||  | ||| ||||||||||| ||||    
T  29694050 aagaatataatgtaagtatgaaagagaaaattatctaaaaattatcacaaaataatagtagaaatatcatttctctt 29694126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 45548792 - 45548852
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||| ||| ||| || || |||||||||||||||||||||||| |||||||||||    
T  45548792 gtgagtatgaaagaaaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcattt 45548852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 39449253 - 39449171
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||| || | |||||||||||||| ||| || || |||| |||||||||||| |||||||||||||||||| ||||    
T  39449253 agagaataagaacatgatgtgagtatgagagaaaaaattgtc-aaaagttatcacaaaatagttgtataaatatcatttctctt 39449171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 42854020 - 42853937
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||||||| |||||||||| ||| ||| || ||||||| || ||| ||||| |||||| ||||||||||| ||||    
T  42854020 agagagtaaaaatataatgtgagtatgatagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 42853937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 44495988 - 44496067
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||  ||| ||||||||| ||| ||||||||||||||||| |||||  ||||| || |||||||| ||||    
T  44495988 agtaagaatataatatgaatatgagagagaaaattatctaaaaattatcaaaaaataattgtacaactatcatttctctt 44496067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 8681022 - 8680944
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| | | |||||||||||||| ||| || || ||||| ||||||| |||||||||| |||||||||||    
T  8681022 agagaataagaatctcatgtgagtatgagagagaaagttgtccaaaaaatatcacataatggttgtacaaatatcattt 8680944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 9472503 - 9472581
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| |||| |||||||||||||| ||| || || ||||||||| | ||||| |||||| |||||||||||    
T  9472503 agagaataagaagataatgtgagtatgagagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcattt 9472581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 29525939 - 29525861
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||  ||||||||||||| ||| ||||| |||| || | | |||||||||||| |||||||||||    
T  29525939 agagaataagaatataatctgagtatgagagagaaagttatcaaaaagttgtaataaaatggttgtacaaatatcattt 29525861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 34259896 - 34259818
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||| |||| |||||||||||||| ||| || |  || | || |||||||||||||||| |||||||||||    
T  34259896 agagagtaagaagataatgtgagtatgagagagaaagttgttcaacagttgtcacaaaatggttgtacaaatatcattt 34259818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 35580207 - 35580125
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatct 94  Q
    ||||| ||||||||||| ||| |||||||| | ||| || || ||||||| ||| ||||||| |||| |||||||||||||||    
T  35580207 agagaataagaatataatgtgggtatgagaaagaaaattgtcaaaaaattgtcagaaaatggctgtacaaatatcatttatct 35580125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 34114115 - 34114188
Alignment:
Q  20 agaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    ||||||||| |||||||||||||| ||| || || |||| |||| | ||||| |||||| ||||||||||||||    
T  34114115 agaatataacgtgagtatgagagaaaaagttgtcaaaaagttataataaaatagttgtacaaatatcatttatc 34114188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 37869784 - 37869861
Alignment:
Q  28 aagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttgtataaataa 105  Q
    |||||||||||||||| ||| || ||||||| |||| |||||||  |||| |||||||||||| |||| | |||||||    
T  37869784 aagtgagtatgagagagaaagttgtctaaaagttattacaaaataattgtttaaatatcatttctcttatttaaataa 37869861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 12694436 - 12694496
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| ||||||||| ||| ||||| |||| || |||||||||||||||| |||||||||||    
T  12694436 gtgaatatgagagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatcattt 12694496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 18568823 - 18568883
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||| ||||| ||| || || |||| || ||||||||||||||||||||||||||||    
T  18568823 gtgagtataagagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcattt 18568883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 33484123 - 33484175
Alignment:
Q  37 tgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatt 89  Q
    ||||||| ||| || || |||||||||||||||||||||||| ||||||||||    
T  33484123 tgagagagaaagttgtccaaaaattatcacaaaatggttgtacaaatatcatt 33484175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 34116536 - 34116608
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| |||||||||||||| ||| || || |||| || ||||||| |||||||| |||||||||||    
T  34116536 taagagtataatgtgagtatgagagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 34116608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 40847449 - 40847373
Alignment:
Q  14 agagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||| |||||||||||||| ||| |  |||||||||| | |||||||  ||||| |||||| ||||    
T  40847449 agagtaagaatataatgtgagtatgagagagaaaatggtctaaaaattgttacaaaataattgtacaaatataattt 40847373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 52487282 - 52487342
Alignment:
Q  35 tatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||| ||||  ||||||||||||||| | |||||| ||||||||||||||||    
T  52487282 tatgagagagaaagttatacaaaaattatcacaaattagttgtacaaatatcatttatctt 52487342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 11493190 - 11493260
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatt 89  Q
    ||||||||||| || ||||||||||| ||| ||||| ||||||| |  ||||||||||||| ||||||||||    
T  11493190 taagaatataatgttagtatgagagagaaagttatc-aaaaattgtatcaaaatggttgtacaaatatcatt 11493260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 36444397 - 36444468
Alignment:
Q  24 tataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||||||||||| ||| || |  |||| |||||| |||||||||||| ||||||||||| ||||    
T  36444397 tataatgtgagtatgagagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctctt 36444468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 40308515 - 40308444
Alignment:
Q  19 aagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||| |||||||||| ||| ||| || || ||||||||| | |||||| ||||| |||||||||||    
T  40308515 aagaatataatgtgagtatgaaagagaaagttgtcaaaaaattattataaaatgattgtacaaatatcattt 40308444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 41170853 - 41170771
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| ||||||| |||||||||||||| ||| || || |||| || |  ||||||||||||| ||||||||||||||||    
T  41170853 agagaataaaaatataatgtgagtatgagagagaaagttgtc-aaaagttgtaccaaaatggttgtacaaatatcatttatctt 41170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 43608054 - 43608117
Alignment:
Q  33 agtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttg 96  Q
    ||||||||||||||| ||||| ||||||| | | |||||  ||||||||||||||||| |||||    
T  43608054 agtatgagagataaagttatcaaaaaattgtgagaaaatacttgtataaatatcatttctcttg 43608117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 45779300 - 45779359
Alignment:
Q  31 tgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||| | ||| || || ||||||||| ||||||| ||||||||||||||||||    
T  45779300 tgagtatgagaaagaaagttgtcaaaaaattataacaaaatagttgtataaatatcattt 45779359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 51717272 - 51717355
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| || ||||||||| | ||| ||||| | || || ||||||| |||||||| ||||||||||| ||||    
T  51717272 agagaataagaatataatgtaagtatgagaaagaaagttatcaagaagttgtcacaaattggttgtacaaatatcatttctctt 51717355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 1031836 - 1031758
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| |||||||||||||| ||| || || | || |||||||||| |||||||| |||||||||||    
T  1031836 agagaataaaaacataatgtgagtatgagagagaaagttgtcaagaagttatcacaaagtggttgtacaaatatcattt 1031758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 4514255 - 4514333
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| || |||||||| |||||||||||||| ||| || || ||||||| | |  |||||||||||||||||| ||||    
T  4514255 agagaatatgaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaatgaaatggttgtataaatattattt 4514333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 11012222 - 11012144
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| ||||||| || ||||||||||||||| || |  |||| || ||| |||||||||||| |||||||||||    
T  11012222 agagaataaaaatataatgtaagtatgagagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcattt 11012144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 35661600 - 35661670
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||| |||||||||||||| |   || |||||||||| ||| |||||||||||| ||||||||||| ||||    
T  35661600 ataatgtgagtatgagagaaagtgttgtctaaaaattgtcataaaatggttgtacaaatatcatttctctt 35661670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 38160763 - 38160841
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| |||||  ||||||||||||| ||| || || ||  ||| ||||||||| ||||||||||||||||||    
T  38160763 agagaataagagtataatatgagtatgagagagaaagttgtcaaatgattgtcacaaaatagttgtataaatatcattt 38160841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 40161712 - 40161769
Alignment:
Q  32 gagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||| ||||||| |||| ||||| |||||||||||||||| || |||||||||||    
T  40161712 gagtatgaaagataaaattatttaaaagttatcacaaaatggtt-tacaaatatcattt 40161769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 44165990 - 44165912
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||||||||||||| ||| || || ||||||| || |||| |||||||| |||||||||||    
T  44165990 agagaataagagaataatgtgagtatgagagagaaagttgtcaaaaaattgtcgcaaagtggttgtacaaatatcattt 44165912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 44170630 - 44170692
Alignment:
Q  33 agtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||| |||| ||| || || ||||||||| |||||||||||||| ||||||||||| ||||    
T  44170630 agtatgtgagagaaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttctctt 44170692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 46794491 - 46794569
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| ||||| |||||||||||||| ||| || || |||| || ||| ||| |||||||| |||||||||||    
T  46794491 agagaataagagtataatgtgagtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcattt 46794569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 46912789 - 46912867
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || |  ||||||| | | ||| |||||||| |||||||||||    
T  46912789 agagaataagaatataatgtgagtatgagagagaaagttgttaaaaaattgtaataaagtggttgtacaaatatcattt 46912867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 47540216 - 47540138
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| ||||| ||||||| | | ||| ||| |||| | |||||||||    
T  47540216 agagattaagaatataatgtgagtatgagagagaaagttatcaaaaaattgttaaaaagtggatgtacatatatcattt 47540138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 50506462 - 50506396
Alignment:
Q  25 ataaagtgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||| ||||||||| ||| |||||| ||||||||||| |||||||||||  |||||||||||    
T  50506462 ataatgtgaatatgagagagaaaattatctcaaaaattatcaaaaaatggttgttcaaatatcattt 50506396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 52224174 - 52224096
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| ||||| ||||||||| |||| ||| || || ||||||||||| ||| ||||||||  ||||||||||    
T  52224174 agagaataagagtataatgtgagtatgtgagagaaagttgtcaaaaaattatcataaagtggttgtactaatatcattt 52224096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 52456917 - 52456994
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| ||||||| |||||||||||||| ||| || ||||||| || ||| |||||  ||||| |||||||||||    
T  52456917 agagagtaaaaatataatgtgagtatgagagagaaaattgtctaaaagttgtcaaaaaat-attgtacaaatatcattt 52456994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 55996503 - 55996425
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| |||| |||||||||||||| ||| || || ||||||| | | |||||| ||||| |||||||||||    
T  55996503 agagaataagaagataatgtgagtatgagagagaaaattgtcaaaaaattgttagaaaatgattgtacaaatatcattt 55996425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 4896502 - 4896579
Alignment:
Q  24 tataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttgtataa 101  Q
    ||||| ||||||||| |||| ||| || || |||| || ||||||| |||||||| ||||||||||| |||| |||||    
T  4896502 tataatgtgagtatgcgagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcttatataa 4896579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 17805533 - 17805460
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatat 85  Q
    ||||| |||||| |||| |||||||||||||| ||| || || ||||||||| | ||||| |||||| ||||||    
T  17805533 agagaataagaaaataatgtgagtatgagagagaaaattgtcaaaaaattattaaaaaatagttgtacaaatat 17805460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 23837090 - 23837147
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaa 69  Q
    ||||| ||| |||| || ||||||||| |||||||| || ||||||||||||||||||    
T  23837090 agagattaaaaataaaatgtgagtatgggagataaagttgtctaaaaattatcacaaa 23837147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 48743785 - 48743708
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| ||| |||||||||||||| ||| || || ||||||| | | ||| |||||||| ||||||||||| ||||    
T  48743785 taagaatgtaatgtgagtatgagagagaaaattgtcaaaaaattgttaaaaattggttgtacaaatatcatttttctt 48743708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 52392228 - 52392293
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||||||| || || |||| || ||||||| ||| |||| |||||||||||    
T  52392228 ataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaagtggatgtacaaatatcattt 52392293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 12638888 - 12638828
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || |||||||||| | ||||| | |||||| |||||||||||    
T  12638888 gtgagtatgagagagaaagttgtctaaaaattgttacaaagtagttgtacaaatatcattt 12638828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 13267486 - 13267546
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| |||| ||| || || |||| || |||||||||||||||| |||||||||||    
T  13267486 gtgagtatgtgagagaaagttttccaaaatttgtcacaaaatggttgtacaaatatcattt 13267546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 40721972 - 40722032
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || || ||||||||| | ||||||| |||| |||||||||||    
T  40721972 gtgagtatgagagagaaagttgtccaaaaattattataaaatggatgtacaaatatcattt 40722032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 47288160 - 47288080
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||| | |||||||||||| ||| || ||  ||||||| | |||||||||||||| ||||||||||| ||||    
T  47288160 agtaaaaatataacgcgagtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctctt 47288080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 48414242 - 48414202
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcatttatct 94  Q
    ||||| ||||||||||||  |||||||||||||||||||||    
T  48414242 taaaatttatcacaaaataattgtataaatatcatttatct 48414202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 49585072 - 49584992
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||| |||||||||||||| ||| || ||  ||||||||| | |||||||| ||| ||||||||||| ||||    
T  49585072 agtaaaaatataatgtgagtatgagagagaaagttgtcccaaaaattattagaaaatggtcgtagaaatatcatttctctt 49584992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 49768872 - 49768952
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttgtataaataa 105  Q
    |||| |||||||||||||| ||| || || ||||||| |  |||||||| |||| ||||||||||| |||| || ||||||    
T  49768872 ataatgtgagtatgagagagaaagttgtcaaaaaattgttgcaaaatggatgtacaaatatcatttctcttttaaaaataa 49768952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 55268009 - 55268069
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||||||| || |  |||| || ||||||| |||||||| |||||||||||    
T  55268009 gtgagtatgagagataaagttgtacaaaagttgtcacaaattggttgtacaaatatcattt 55268069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 35376541 - 35376624
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||||||  ||||||||||||| ||| || |||||||||| |||||||||||||||| ||||||||||| ||||    
T  35376541 agagagtaagaatataatatgagtatgagagagaaagttgtctaaaaattgtcacaaaatggttgtacaaatatcatttctctt 35376624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 1901916 - 1901999
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || ||||||| |||||||| ||||||||||| ||||    
T  1901916 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctctt 1901999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 1911362 - 1911445
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || ||||||| |||||||| ||||||||||| ||||    
T  1911362 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctctt 1911445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 462391 - 462469
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || ||||||| || |||||||||||||||| |||||||||||    
T  462391 agagaataagaatataacgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcattt 462469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 1295413 - 1295335
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || || |||| |||||||||||| |||||| |||||||||||    
T  1295413 agagagtaagaatataatgtgagtatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcattt 1295335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 36869827 - 36869905
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || ||| |||||||||||| |||||||||||    
T  36869827 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatggttgtacaaatatcattt 36869905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 45150256 - 45150334
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || ||||||||| ||||||||| ||||||||    
T  45150256 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatagttgtataagtatcattt 45150334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 43409354 - 43409430
Alignment:
Q  14 agagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||| |||||||| ||||| ||| || || ||||||||||||||| |||||||| |||||||||||    
T  43409354 agagtaagaatataatgtgagtataagagagaaagttttccaaaaattatcacaaagtggttgtacaaatatcattt 43409430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 20216029 - 20215946
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||||||| | |||||||||||| ||| || |||||||||| ||||||| |||||||| ||||||||||| ||||    
T  20216029 agagagtaaaaatataatgcgagtatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttctctt 20215946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 31326791 - 31326708
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||||||||||||||||| ||| ||| |||| |||||||| | | ||| |||||||| ||||||||||| ||||    
T  31326791 agagagtaagaatataaagtgagtatgaaagagaaagttatttaaaaattctgagaaagtggttgtacaaatatcatttctctt 31326708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 47773965 - 47774048
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| |||||||  ||| ||||||||||||| |||||||||| |||||||||||||  |||| ||||||||||| ||||    
T  47773965 agagagtaaaaatataatatgaatatgagagataaagttatctaaaagttatcacaaaatgaatgtacaaatatcatttctctt 47774048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 31176430 - 31176508
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| |||||||  ||||||| ||||| ||| || |||||||||||||||||| |||||||| |||||||||||    
T  31176430 agagagtaaaaatataatctgagtataagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcattt 31176508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 34607910 - 34607988
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||  ||||||||| ||| ||| ||||||||||||| ||||||| |||||||| |||||||||||    
T  34607910 agagagtaagaatagaatatgagtatgaaagagaaaattatctaaaaattgtcacaaagtggttgtacaaatatcattt 34607988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 34628070 - 34628143
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| |||||||||||| ||||| |||||||||| || | | |||||||||||| ||||||||||||||||    
T  34628070 aatataatgtgagtatgagaaataaagttatctaaaagttgttaaaaaatggttgtacaaatatcatttatctt 34628143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 7867701 - 7867784
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||| | ||| || | ||||| || ||||||||| |||||| ||||||||||| ||||    
T  7867701 agagagtaagaatataatgtgagtatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcatttctctt 7867784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 29800539 - 29800622
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||| |||| ||||||| || ||||||||||| ||| || |||||||||||||||||| | |||||| ||||||||||| ||||    
T  29800539 agagggtaaaaatataatgtaagtatgagagaaaaagttgtctaaaaattatcacaaagtagttgtacaaatatcatttctctt 29800622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 47849753 - 47849670
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||  ||| ||| || || |||||||||||||||||||||||| ||||||||||| ||||    
T  47849753 agagaataagagtataatgtgagtatgtaagagaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttctctt 47849670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 29705984 - 29705906
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||||||||| ||| ||| ||||| |||||||||||||||||  |||||||||||||||||    
T  29705984 agagaataagagaataatgtgagtatgaaagagaaaattatcaaaaaattatcacaaaataattgtataaatatcattt 29705906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 32981111 - 32981189
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| ||||||| |||||||||||||| ||| || ||||||| || |||| ||||||||||| |||||| ||||    
T  32981111 agagagtaataatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaatataattt 32981189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 9027941 - 9027876
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||| ||| ||||| |||| |||||||||| |||||||| |||||||||||    
T  9027941 ataatgtgagtatgagagagaaagttatcaaaaagttatcacaaagtggttgtacaaatatcattt 9027876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 25959536 - 25959609
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatt 89  Q
    ||||| ||||||| |||||||||||||| ||| || ||||||| |||||||||| |||||||  ||||||||||    
T  25959536 agtaaaaatataatgtgagtatgagagagaaagttgtctaaaagttatcacaaagtggttgtccaaatatcatt 25959609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 36799473 - 36799401
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||| |||||||||||| ||||| || | ||||| |||||| ||||| |||||| |||||||||||    
T  36799473 taagaatataatgtgagtatgagaaataaaattgtttaaaagttatcaaaaaatagttgtacaaatatcattt 36799401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 40419650 - 40419710
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| ||||||||| ||| || ||||||||||||||||||||| ||||| |||||||||||    
T  40419650 gtgaatatgagagagaaaattgtctaaaaattatcacaaaatgattgtacaaatatcattt 40419710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 50294104 - 50294180
Alignment:
Q  14 agagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||| |||||| ||||||||||| || | ||||| || || |||| |||||||| |||||||||||    
T  50294104 agagtaagaatataatgtgagtgtgagagataaaattgtttaaaagttgtcgcaaagtggttgtacaaatatcattt 50294180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 108512 - 108429
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||  |||| |||||||||||||| ||| || || ||||||| ||||||| |||||||| ||||||||||| ||||    
T  108512 agagaataagaggataatgtgagtatgagagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctctt 108429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 14207456 - 14207377
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattta 91  Q
    ||||| ||||| ||||| |||||||||||||| ||| || || |||  |||||||||| |||||||| ||||||||||||    
T  14207456 agagaataagagtataatgtgagtatgagagagaaagttgtcaaaaggttatcacaaagtggttgtacaaatatcattta 14207377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 14215204 - 14215125
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattta 91  Q
    ||||| ||||| ||||| |||||||||||||| ||| || || |||  |||||||||| |||||||| ||||||||||||    
T  14215204 agagaataagagtataatgtgagtatgagagagaaagttgtcaaaaggttatcacaaagtggttgtacaaatatcattta 14215125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 18181524 - 18181441
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| || ||||| ||| | ||| |||||||||| |||||  ||| |||||||| ||||||||||| ||||    
T  18181524 agagagtaagaatataatgtaagtatcagataaaaagttatctaaaagttatcgtaaagtggttgtagaaatatcatttctctt 18181441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 32795911 - 32795828
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||||||| |||||||||||||| ||| || ||||||| || | ||||  ||||| |||||||||||||| ||||    
T  32795911 agagagtaataatataatgtgagtatgagagagaaaattgtctaaaagttgttacaatgtggttatataaatatcatttctctt 32795828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 45528932 - 45529015
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||| ||| |||||||||||| | ||| || ||||||| || ||| ||||| |||||| ||||||||||| ||||    
T  45528932 agagagtaagaatctaatgtgagtatgagaaagaaatttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 45529015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 49196777 - 49196694
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||||||| ||| || ||  ||| || |||||||||||||||| ||||||||||| ||||    
T  49196777 agagaataagagtataatgtgagtatgagagagaaaattgtcacaaagttgtcacaaaatggttgtacaaatatcatttctctt 49196694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 41369678 - 41369600
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| |||| |||||| ||||||| ||| || || ||||||||| | |||||||||||| |||||||||||    
T  41369678 agagaataagaagataatgtgagtttgagagagaaagttgtcaaaaaattattagaaaatggttgtacaaatatcattt 41369600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 7210 - 7287
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||||||||||||| ||| || || |||| || ||| |||||| ||||| ||||||||||| ||||    
T  7210 taagaatataatgtgagtatgagagagaaagttgtccaaaagttgtcagaaaatgattgtacaaatatcatttctctt 7287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 27198160 - 27198233
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||  ||||||||||||||||| || | ||||| |||||| |||||| ||||| ||||||||||| ||||    
T  27198160 aatataatatgagtatgagagataaaattgtttaaaagttatcaaaaaatgattgtacaaatatcatttctctt 27198233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 34271481 - 34271558
Alignment:
Q  13 gagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| ||||||||||| ||||||||| |||| ||| ||||| |||| || | ||||| |||||||| |||||||||||    
T  34271481 gagaataagaatataacgtgagtatgtgagagaaagttatcaaaaagttgttacaaagtggttgtacaaatatcattt 34271558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 41349008 - 41349045
Alignment:
Q  52 tctaaaaattatcacaaaatggttgtataaatatcatt 89  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  41349008 tctaaaaattatcacaaaatggttgtacaaatatcatt 41349045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 51464275 - 51464340
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||||||| || || |||| || ||||||| |||||||| |||||||||||    
T  51464275 ataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 51464340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 53932399 - 53932464
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||  ||| || || ||||||| |||||||||||||||| ||||||||||| ||||    
T  53932399 gtgagtatgagagtgaaagttgtccaaaaattgtcacaaaatggttgtacaaatatcatttctctt 53932464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 8868951 - 8868875
Alignment:
Q  14 agagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||| |||||||||||||| ||| || ||| ||| || ||| |||| | ||||| |||||||||||    
T  8868951 agagtaagaatataatgtgagtatgagagagaaagttgtctgaaagttgtcaaaaaaagattgtacaaatatcattt 8868875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 20380889 - 20380957
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||||||||||| ||| || || | || || ||||||| |||||||| |||||||||||    
T  20380889 aatataaagtgagtatgagagagaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcattt 20380957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 50652451 - 50652391
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||| ||||| ||||| |||| || ||| |||||||||||| |||||||||||    
T  50652451 gtgagtatgagatataaatttatccaaaagttgtcataaaatggttgtacaaatatcattt 50652391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 12094379 - 12094474
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatc-ttgtataaataaa 106  Q
    ||||| || |||||||| |||||||||||||| | | || |  ||||||| ||| ||||| |||||||||||||||||| || || ||||||||||    
T  12094379 agagaatacgaatataatgtgagtatgagagagacattttttaaaaaattgtcataaaatagttgtataaatatcatttctcattttataaataaa 12094474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 20893255 - 20893310
Alignment:
Q  35 tatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||| |||||| || || |||||||||||||||||||||||| |||||| ||||    
T  20893255 tatgagggataaagttgtcaaaaaattatcacaaaatggttgtacaaatattattt 20893310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 43499552 - 43499634
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||| | | ||| || || |||| |||||| ||| |||||||| ||||||||||| ||||    
T  43499552 agagagtaagaatataatgtgagtatga-aaagaaaattgtccaaaagttatcataaagtggttgtacaaatatcatttctctt 43499634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 44127182 - 44127264
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| ||||||||| |||| ||| || | |||||||| | | |||| ||||||| ||||||||||| ||||    
T  44127182 agagagtaagaatataatgtgagtatgggagagaaagttgtataaaaattgtta-aaaaaggttgtacaaatatcatttctctt 44127264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 52727438 - 52727521
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| ||||||||| |||| ||| || || ||||||||||| ||| || ||||| ||||||||||| ||||    
T  52727438 agagaataagagtataatgtgagtatgtgagagaaagttgtcaaaaaattatcataaagtgattgtacaaatatcatttctctt 52727521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 1834587 - 1834509
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || |  ||||||| |  ||||||||||||| |||||| ||||    
T  1834587 agagaataagaatataatgtgagtatgagagagaaagttgttcaaaaattgtagcaaaatggttgtacaaatattattt 1834509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 27646579 - 27646501
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| ||||| |||||||||||| || || |||||||||  ||||||| ||||| |||||||||||    
T  27646579 agagaataaaaacataatgtgagcatgagagataaagttgtccaaaaattattgcaaaatgattgtacaaatatcattt 27646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 28300367 - 28300289
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||  ||||||| | ||| ||| || || ||||||||| | |||||||||||| |||||||||||    
T  28300367 agagaataagaatataatttgagtataaaagaaaaagttgtcaaaaaattataataaaatggttgtacaaatatcattt 28300289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 29222404 - 29222473
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| ||||||| ||| |  || ||||||||||| |||||| ||||||||||||||||| ||||    
T  29222404 ataaagtgagtgtgagagaaaaattgttc-aaaaattatcataaaatgattgtataaatatcatttttctt 29222473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 33374564 - 33374490
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatc-taaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| |||||||||||||| ||| ||||| |||||||| ||| ||||||||| |  ||||||||||| ||||    
T  33374564 aatataatgtgagtatgagagagaaagttatcataaaaattgtcataaaatggttattcaaatatcatttctctt 33374490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 34733281 - 34733363
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatct 94  Q
    ||||| ||| ||||||| ||||||||| || | ||| || || |||| || ||||||| |||||||| |||||||||||||||    
T  34733281 agagaataaaaatataatgtgagtatgtgaaagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttatct 34733363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 37035691 - 37035613
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaa-tggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||| ||||||||| ||| || ||||||| || ||| |||| ||||| || ||||||||||||||||    
T  37035691 taagaatataacgtgaatatgagagagaaaattgtctaaaagttgtcaaaaaaatggttatacaaatatcatttatctt 37035613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 41717344 - 41717266
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||| | ||| || | ||||| || |||| ||||  ||||| |||||||||||    
T  41717344 agagagtaagaatataacgtgagtatgagatagaaagttgtttaaaagttgtcactaaataattgtacaaatatcattt 41717266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 43900747 - 43900825
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || || |||| || | | ||| |||||||| |||||||||||    
T  43900747 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcattt 43900825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 46315945 - 46316023
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||| ||| ||  ||||| |||| || ||| ||| |||||||| |||||||||||    
T  46315945 agagaataagaatataatgtgagtatgaaagagaagattatcaaaaagttgtcataaagtggttgtacaaatatcattt 46316023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 51032614 - 51032692
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| |||| |||||||||||||| ||| || || |||| || | | |||||||||||| |||||||||||    
T  51032614 agagaataagaagataatgtgagtatgagagagaaaattgtcaaaaagttgttagaaaatggttgtacaaatatcattt 51032692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 1668165 - 1668222
Alignment:
Q  35 tatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttat 92  Q
    ||||||||||||| || | |||||||||| | |||||||||||  |||||||||||||    
T  1668165 tatgagagataaagttgtataaaaattattataaaatggttgttcaaatatcatttat 1668222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 16139285 - 16139366
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    ||||| ||||||||||| |||  ||||||||| ||| || |  |||| |||||| |||||||||||| |||||| |||||||    
T  16139285 agagaataagaatataatgtgtttatgagagagaaaattgttcaaaagttatcataaaatggttgtacaaatattatttatc 16139366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 21579189 - 21579112
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||||||||||||| ||| || ||  ||| || | | ||| |||||||||||||||||||| ||||    
T  21579189 taagaatataatgtgagtatgagagagaaaattgtcataaagttgttagaaattggttgtataaatatcatttctctt 21579112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 33256348 - 33256307
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||| || ||||||||||||||||||||||||| ||||    
T  33256348 taaaaattgtctcaaaatggttgtataaatatcatttctctt 33256307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 43176265 - 43176200
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||||||| || ||  |||||| | ||||| |||||||| ||||||||||| ||||    
T  43176265 gtgagtatgagagataaagttgtcataaaattgtaacaaagtggttgtacaaatatcatttctctt 43176200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 51771447 - 51771507
Alignment:
Q  30 gtgagtatgagagataaacttatc-taaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| |||||  ||||||||| |||||||||||||| |||||||||||    
T  51771447 gtgagtatgagagagaaaattatcaaaaaaattat-acaaaatggttgtacaaatatcattt 51771507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 55344296 - 55344369
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| | |||||||| ||| ||| || || | || ||||||||||||||||||| ||||||||||| ||||    
T  55344296 aatataatgcgagtatgaaagagaaaattgtcaagaagttatcacaaaatggttgtacaaatatcatttctctt 55344369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 9582167 - 9582227
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||| ||||| ||| |||| |||||||||||| ||| |  |||||||||||||||||    
T  9582167 gtgagtatcagagagaaatttatataaaaattatcataaagtaattgtataaatatcattt 9582227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 11327171 - 11327111
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || |  |||| || |||||||||||||||| |||||||||||    
T  11327171 gtgagtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcattt 11327111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 12792692 - 12792636
Alignment:
Q  39 agagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| || |||||||||| ||||||| |||||||| ||||||||||| ||||    
T  12792692 agagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttctctt 12792636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 32622395 - 32622431
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||| |||||| |||||||||||||||||    
T  32622395 taaaaattatcaaaaaatgattgtataaatatcattt 32622431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 35425668 - 35425740
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||| |||||||||||||||||| || || |||| || | | ||| |||||||| | |||||||||    
T  35425668 taagaatataatgtgagtatgagagataaagttgtcaaaaagttgtaataaagtggttgtacatatatcattt 35425740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 41309081 - 41309005
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcat 88  Q
    ||||| |||||  |||| |||||||||||||| ||| || |  ||||||| ||||||| |||||||| |||||||||    
T  41309081 agagaataagaggataatgtgagtatgagagagaaaattgttaaaaaattgtcacaaagtggttgtacaaatatcat 41309005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 47141608 - 47141668
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || |  |||||||||  ||||||||||||| |||||||||||    
T  47141608 gtgagtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcattt 47141668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 23554832 - 23554749
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||||||||||| || | |||||||||||| |||||||||||| ||||||||||| ||||    
T  23554832 agagaataagaatataatgtgagtatgagagataaagttgtttaaaaattatcaaaaaatggttgtacaaatatcatttctctt 23554749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 27352711 - 27352628
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || || |||| ||||||||||||||||||| ||||||||||| ||||    
T  27352711 agagagtaagaatataatgtgagtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttctctt 27352628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 45350091 - 45350163
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||  ||||| |||||||||||    
T  45350091 taagaatataatgtgagtatgagagaaaaaattatctaaaaattatcacaaaataattgtacaaatatcattt 45350163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 586980 - 586902
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| || ||||||||||| ||| || |||||||||||||||||| || ||||| |||||||||||    
T  586980 agagagtaagaatataatgtaagtatgagagaaaaagttgtctaaaaattatcacaaagtgattgtacaaatatcattt 586902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 30530564 - 30530642
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| ||||||| |||||||||||||| ||| || ||||||| || ||||||||||||||||||||||||||||    
T  30530564 agagaataaaaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcattt 30530642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 49621440 - 49621366
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||| || |||||||||||||| ||| || |||||||||||| |||||||||||||| |||||||||||    
T  49621440 agtaagaatagaatgtgagtatgagagagaaagttgtctaaaaattattacaaaatggttgtacaaatatcattt 49621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 3919381 - 3919303
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| | |||||||||||| ||| || || ||||||||| |||||||||||||| |||||||||||    
T  3919381 agagaataagaatataatgcgagtatgagagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcattt 3919303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 25988974 - 25989052
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || | | |||||||||||| |||||||||||    
T  25988974 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttgttaaaaaatggttgtacaaatatcattt 25989052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 30687133 - 30687055
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||| ||| ||| || ||||||| || |||| ||||||||||| |||||||||||    
T  30687133 agagagtaagaatataatgtgagtatgatagaaaaagttgtctaaaagttgtcactaaatggttgtacaaatatcattt 30687055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 32821716 - 32821638
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || | ||||| || ||||||| |||||||| |||||||||||    
T  32821716 agagagtaagaatataatgtgagtatgagagagaaaattgtttaaaagttgtcacaaagtggttgtacaaatatcattt 32821638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 34941914 - 34941988
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||| |||||||||| | ||| |||||||||||    
T  34941914 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaaatgatagtacaaatatcattt 34941988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 36930744 - 36930821
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || |||||||||| ||||| |||||||||||    
T  36930744 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagtt-tcacaaaatgattgtacaaatatcattt 36930821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 50528047 - 50528125
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || ||||||| || ||||| |||||||||||    
T  50528047 agagagtaagaatataatgtgagtatgagagaaaaaattgtctaaaagttgtcacaaattgattgtacaaatatcattt 50528125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 51168758 - 51168836
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||| ||||||||| ||| || ||||||| ||||||||||||| ||||| || ||||||||    
T  51168758 agagagtaagaatataatgtgaatatgagagaaaaagttgtctaaaagttatcacaaaatgattgtacaagtatcattt 51168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 5043173 - 5043096
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatt 89  Q
    ||||||||||||||||| |||| ||||| ||| ||| |||| ||||||||||||||||||  ||||| ||||||||||    
T  5043173 agagagtaagaatataatgtgaatatgaaagagaaagttatttaaaaattatcacaaaataattgtacaaatatcatt 5043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 8757508 - 8757588
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttat 92  Q
    |||||||||||||||||  ||||| ||||||| ||| || || ||||||||||| ||||| |||||||||||||| |||||    
T  8757508 agagagtaagaatataatatgagtgtgagagagaaagttgtccaaaaattatcataaaattgttgtataaatatcttttat 8757588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 49596316 - 49596233
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||||||| ||| || || ||||||| | | |||||||||||| ||||||||||| ||||    
T  49596316 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaaatggttgtacaaatatcatttctctt 49596233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 25098778 - 25098856
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||  || ||||||| || | ||||| |||||||| |||||||||||    
T  25098778 agagagtaagaatataatgtgagtatgagagagaaggttgtctaaaagttgttacaaagtggttgtacaaatatcattt 25098856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 40605415 - 40605489
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||| || ||||| ||||| ||| || |||||||||||||| |||| ||||||| |||||||||||    
T  40605415 agtaagaatataatgtaagtataagagagaaagttgtctaaaaattatcaaaaaaaggttgtacaaatatcattt 40605489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 43755668 - 43755758
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttgtataaa 102  Q
    ||||| ||||| |||||  ||||||||| ||| ||| || || ||||||||||| |||||||||||| ||||||||||| |||| ||||||    
T  43755668 agagaataagagtataatatgagtatgaaagagaaaattgtcaaaaaattatcataaaatggttgtacaaatatcatttctcttatataaa 43755758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 366732 - 366655
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| |||||||||||||| ||| || || |||| |||||| ||| |||||||||||||||||||| ||||    
T  366732 taagagtataatgtgagtatgagagagaaagttgtcaaaaagttatcagaaagtggttgtataaatatcatttctctt 366655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 16658518 - 16658441
Alignment:
Q  13 gagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||| || |||||||||||||| ||| || ||||||| || ||||||  |||||||| |||||||||||    
T  16658518 gagagtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcattt 16658441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 32966347 - 32966270
Alignment:
Q  13 gagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||  |||| |||||||| ||| |||| |||||||| ||||||| |||||||| |||||||||||    
T  32966347 gagattaagaatataatatgagaatgagagaaaaaattatttaaaaattgtcacaaagtggttgtacaaatatcattt 32966270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 48325303 - 48325226
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatt 89  Q
    ||||||||| ||||||| |||||||||||||| ||| ||||||||||||| | | |||||  ||||| ||||||||||    
T  48325303 agagagtaaaaatataatgtgagtatgagagagaaaattatctaaaaattgttaaaaaataattgtacaaatatcatt 48325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 36231714 - 36231774
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || |||||| ||| |||||||||||||||| |||||||||||    
T  36231714 gtgagtatgagagagaaagttgtctaaatattgtcacaaaatggttgtacaaatatcattt 36231774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 42299178 - 42299254
Alignment:
Q  14 agagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||| |||||||  ||| ||||||| | ||| || ||||||||||||||||||||||||||| |||||| ||||    
T  42299178 agagtaaaaatataatatgaatatgagaaaaaaaattgtctaaaaattatcacaaaatggttgtacaaatattattt 42299254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 41885802 - 41885719
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||||||  ||| || | |||||| |||||||||||  ||||| ||||||||||| ||||    
T  41885802 agagaataagaatataatgtgagtatgagagtgaaaattgtataaaaactatcacaaaataattgtacaaatatcatttctctt 41885719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 47113355 - 47113272
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| || |||| |||||||||||||| ||| || || |||||||||  ||||||| ||||| ||||||||||||||||    
T  47113355 agagaataaaaacataatgtgagtatgagagagaaagttgtccaaaaattattgcaaaatgattgtacaaatatcatttatctt 47113272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 18959085 - 18959007
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||||||||||||| ||| || || |||| || | ||||||||||||||||||||||||||    
T  18959085 agagaataagataataatgtgagtatgagagagaaaattgtcaaaaagttgtaacaaaatggttgtataaatatcattt 18959007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 25702205 - 25702283
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||||||| || |||| || || | | |||||  ||||| |||||||||||    
T  25702205 agagagtaagaatataatgtgagtatgagagataaagttgtctacaagttgttaaaaaataattgtagaaatatcattt 25702283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 29254056 - 29254134
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||| |||||||||| |||||||||||||| ||| || |||||||||| | | |||||| ||||| || ||||||||    
T  29254056 agagagaaagaatataatgtgagtatgagagagaaagttgtctaaaaattgttaaaaaatgattgtacaagtatcattt 29254134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 34157600 - 34157523
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| |||| |||||||||||||||||| || |  ||||||||| | |||||||||||| |||||||||||    
T  34157600 agagaataagaagataatgtgagtatgagagataaagttgttaaaaaattatta-aaaatggttgtacaaatatcattt 34157523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 49425818 - 49425741
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| |||| |||||||||||||||||| || || |||| || ||||||| |||||||| |||||||||||    
T  49425818 agagaataagaaaataatgtgagtatgagagataaagttgtc-aaaagttgtcacaaagtggttgtacaaatatcattt 49425741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 52368749 - 52368672
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || | |||||||| ||| |||| |||| || |||||||||||    
T  52368749 agagagtaagaatataacgtgagtatgagagagaaagttgtgtaaaaattgtca-aaaaaggttatacaaatatcattt 52368672  T

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Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 30439318 - 30439253
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||||||| || || ||||||| ||| ||| |||||||| |||||||||||    
T  30439318 ataatgtgagtatgagagataaagttgtcaaaaaattgtcataaattggttgtacaaatatcattt 30439253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 14247727 - 14247667
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || || ||||||||||||||| | |||||| |||||||||||    
T  14247727 gtgagtatgagagagaaagttgtcaaaaaattatcacaaagtcgttgtacaaatatcattt 14247667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 4604610 - 4604534
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||| |||||||||||||  ||| || |||||||||| ||||||  |||||||| |||||| ||||    
T  4604610 agagcgtaagaatataatgtgagtatgagag--aaaattgtctaaaaattgtcacaaggtggttgtacaaatattattt 4604534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 11038343 - 11038260
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| || |||| |||||||||| ||| ||| || |  |||||||||  ||||||||||||||||||||||||| ||||    
T  11038343 agagaataaaaacataatgtgagtatgaaagagaaagttgtacaaaaattataccaaaatggttgtataaatatcatttctctt 11038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 26101456 - 26101397
Alignment:
Q  31 tgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||| |  |||| |||||||||||||||||  ||||| |||||||||||    
T  26101456 tgagtatgagagatagagatatccaaaaattatcacaaaataattgtacaaatatcattt 26101397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 39815427 - 39815344
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||||||| ||| || || |||| || |  ||||||||||||| |||||| |||| ||||    
T  39815427 agagaataagaatataatgtgagtatgagagagaaagttgtccaaaagttgtagcaaaatggttgtacaaatataatttctctt 39815344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 40610310 - 40610227
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||||||| ||  || || ||||||| ||| ||||||  |||||||||||||||| ||||    
T  40610310 agagaataagagtataatgtgagtatgagagagaaggttgtcaaaaaattgtcataaaatgaatgtataaatatcatttctctt 40610227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 43056779 - 43056720
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatt 89  Q
    |||||||||||||| ||| || || |||||||||  ||||||||||||| ||||||||||    
T  43056779 gtgagtatgagagagaaagttgtccaaaaattattgcaaaatggttgtacaaatatcatt 43056720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 44112535 - 44112452
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| ||||||| |||||||||||||| ||| || || ||||||| | | ||| |||||||| ||||||||||| ||||    
T  44112535 agagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 44112452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 45042342 - 45042259
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||||||| ||| || || ||||||| | | ||||| |||||| ||||||||||| ||||    
T  45042342 agagaataagagtataatgtgagtatgagagaaaaaattgtcaaaaaattgttagaaaatagttgtacaaatatcatttctctt 45042259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 48872460 - 48872377
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||||| | |||||||||||||| ||  || ||||||| || ||| ||| |||||||| ||||||||||| ||||    
T  48872460 agagagtaaaaatatgatgtgagtatgagagagaaggttgtctaaaagttgtcataaagtggttgtacaaatatcatttctctt 48872377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 52437572 - 52437497
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| |||||||||||||| ||| || ||  ||||||||| | |||||||||||||| |||||||||    
T  52437572 agtaaaaatataatgtgagtatgagagagaaagttgtcacaaaaattattaaaaaatggttgtatatatatcattt 52437497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 1788334 - 1788412
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| |||| |||||||||||||||||| || || ||||||| | |  ||||||||||| | |||||||||    
T  1788334 agagaataagaagataatgtgagtatgagagataaaattgtcaaaaaattgttagtaaatggttgtacacatatcattt 1788412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8464503 - 8464581
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || || |||| || | | ||| |||||||| |||||||||||    
T  8464503 agagaataagaatataatgtgagtatgagagagaaaattgtcaaaaagttgtaataaagtggttgtacaaatatcattt 8464581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 14002732 - 14002809
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| || | ||||||| | ||| || | |||||||||||| |||| ||||||| |||||||||||    
T  14002732 agagagtaagaatataatgtaaatatgagaaagaaagttgtataaaaattatca-aaaaaggttgtacaaatatcattt 14002809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 19651491 - 19651413
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||| || | |||||||||||||| ||| ||||  |||| || ||||||||||||||||  ||||||||||    
T  19651491 agagaataagaacatcatgtgagtatgagagagaaagttatacaaaagttgtcacaaaatggttgtaggaatatcattt 19651413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 36794696 - 36794618
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||  ||||||||| ||| ||| ||||| |||||||||  ||||||  ||||| |||||||||||    
T  36794696 agagaataagaatataatctgagtatgaaagagaaatttatccaaaaattataccaaaataattgtacaaatatcattt 36794618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 40238515 - 40238441
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||| |||| ||||||||| ||| || | ||||| || ||| |||||| ||||| |||||||||||    
T  40238515 agtaagaatataatgtgaatatgagagaaaaaattgtttaaaagttgtcaaaaaatgattgtacaaatatcattt 40238441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 40612182 - 40612112
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||||| ||| || |  | || || |||||||||||||||| ||||||||||| ||||    
T  40612182 ataaagtgagtatgagagagaaagttgtggagaagttgtcacaaaatggttgtacaaatatcatttctctt 40612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 41608781 - 41608727
Alignment:
Q  41 agataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| ||||| |||||||||||||||||  | ||||||||||||||| ||||    
T  41608781 agataaagttatccaaaaattatcacaaaataatagtataaatatcatttctctt 41608727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 44641893 - 44641971
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| ||||||| |||||||||||||| ||| || || ||||||| | | ||| |||||||| |||||||||||    
T  44641893 agagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 44641971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 44730725 - 44730641
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaactt--atctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||| |||||||||||| |||| ||||| ||| ||| ||  ||||||||||||| | |||||||||||| ||||||||||| ||||    
T  44730725 agagggtaagaatataatgtgaatatgaaagagaaatttttatctaaaaattataa-aaaatggttgtacaaatatcatttctctt 44730641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 48576495 - 48576573
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| | || ||||||||| ||| ||||| |||| || ||| ||||||||| || |||||||||||    
T  48576495 agagaataagaatataatgcgaatatgagagagaaagttatcaaaaagttgtcataaaatggttatacaaatatcattt 48576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 48872941 - 48873018
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||||||||||||| ||| || || |||| || ||||||| ||||||||||||||||||||    
T  48872941 agagaataagaggataatgtgagtatgagagagaaagttctc-aaaagttgtcacaaagtggttgtataaatatcattt 48873018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 51250265 - 51250343
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || || ||||| | |   |||||||||||| |||||||||||    
T  51250265 agagaataagaatataacgtgagtatgagagagaaagttgtcaaaaaactgtattaaaatggttgtacaaatatcattt 51250343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 51339690 - 51339768
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| |||| || |||||||||||| | ||| || ||||||| || | ||||| |||||||| |||||||||||    
T  51339690 agagagtaaaaatagaatgtgagtatgagaaagaaagttgtctaaaagttgttacaaagtggttgtacaaatatcattt 51339768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 7203852 - 7203917
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| ||| || |||||||||| |  |||||||||| || ||||||||||| ||||    
T  7203852 gtgagtatgagagagaaagttgtctaaaaattgttgcaaaatggttatacaaatatcatttctctt 7203917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 11812450 - 11812385
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||| ||||| || || ||||||| |||||||||| ||||| || |||||||| ||||    
T  11812450 gtgagtatgagaaataaagttgtcaaaaaattgtcacaaaatgattgtacaactatcatttctctt 11812385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 26501355 - 26501298
Alignment:
Q  33 agtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||| ||| || || |||| |||| |||||||||||||| |||||||||||    
T  26501355 agtatgagagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcattt 26501298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 27563552 - 27563487
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||| ||| || || |||||||||  ||||||| ||||| |||||||||||    
T  27563552 ataatgtgagtatgagagagaaaattgtcaaaaaattatagcaaaatgattgtacaaatatcattt 27563487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 29489367 - 29489432
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| ||| || |   ||| ||||||||||||||||||| ||||||||||| ||||    
T  29489367 gtgagtatgagagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttctctt 29489432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 32216073 - 32216000
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| |||||||||||||| ||| || ||||||| |||| | |||||  ||||| ||||||||||| ||||    
T  32216073 aatataatgtgagtatgagagagaaagttgtctaaaatttattaaaaaattattgtacaaatatcatttctctt 32216000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 36669378 - 36669443
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| ||| || |  ||||||||||||||| || ||||| ||||||||||| ||||    
T  36669378 gtgagtatgagagaaaaagttgtacaaaaattatcacaaattgattgtacaaatatcatttctctt 36669443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 37515984 - 37515927
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaa 82  Q
    |||| |||||||||||||| ||| || || ||||||||||| ||||| ||||||||||    
T  37515984 ataatgtgagtatgagagagaaaattgtcaaaaaattatcataaaatagttgtataaa 37515927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 50226875 - 50226952
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| | |||||||||||| ||| || || |||| || ||||||| |||||||| ||||||||||| ||||    
T  50226875 taagagtataatgcgagtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctctt 50226952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 50777431 - 50777488
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatca 87  Q
    |||||||||||||| ||| ||||| ||||||| || || |||||||||| ||||||||    
T  50777431 gtgagtatgagagagaaagttatccaaaaattgtcgcataatggttgtacaaatatca 50777488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 11097881 - 11097957
Alignment:
Q  19 aagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||| | |||||||||||||| ||| || |  |||| || ||||||||||| |||| ||||||||||| ||||    
T  11097881 aagaatattatgtgagtatgagagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttctctt 11097957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 24158731 - 24158647
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttg 96  Q
    ||||| |||||| |||| |||||||||| ||||||| || | ||||| || |  | ||||||||||| ||||||||||| |||||    
T  24158731 agagaataagaacataatgtgagtatgaaagataaagttgtataaaagttgtaccgaaatggttgtacaaatatcatttctcttg 24158647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 34173658 - 34173598
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatg 72  Q
    ||||||||| |||| || |||||||||||| | ||| ||||| |||| |||||||||||||    
T  34173658 agagagtaaaaatacaatgtgagtatgagaaagaaatttatccaaaagttatcacaaaatg 34173598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 95
Target Start/End: Original strand, 39380864 - 39380892
Alignment:
Q  67 aaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||||||||||||||||||    
T  39380864 aaaatggttgtataaatatcatttatctt 39380892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 43145299 - 43145335
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  43145299 taaaaattatcacagaattgttgtataaatatcattt 43145335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 48896666 - 48896747
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||| | | |||||||||||||| ||| ||  | ||||||||||||| |||| ||| | ||||||||||||||||    
T  48896666 agagaataagaatctcacgtgagtatgagagagaaagtt--ccaaaaattatcacataatgattgcacaaatatcatttatctt 48896747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 16584 - 16662
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||| || | |||||||||||||| |||||||||||    
T  16584 agagagtaagaatataatgtgagtatgagagagaaaattatctaaaagttgttacaaaatggttgtacaaatatcattt 16662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 56260 - 56182
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||| || | |||||||||||||| |||||||||||    
T  56260 agagagtaagaatataatgtgagtatgagagagaaaattatctaaaagttgttacaaaatggttgtacaaatatcattt 56182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 16743256 - 16743334
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||||||| | |||||||||||| |||||||||||    
T  16743256 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcattt 16743334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 34490426 - 34490346
Alignment:
Q  14 agagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatct 94  Q
    ||||||||||||||| |||||||||||||| ||| || |||||||||| | | |||||||||||| |||||||||||||||    
T  34490426 agagtaagaatataatgtgagtatgagagagaaaattgtctaaaaattgttaaaaaatggttgtacaaatatcatttatct 34490346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 9188934 - 9189017
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||| || | | |||||||||||| ||||||||||| ||||    
T  9188934 agagagtaagaatataatgtgagtatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctctt 9189017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 16533250 - 16533331
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatct 94  Q
    ||||||||| |||| || |||||||||||||||||| || |||||||||| |||| ||||||||||| |||||||||||||||    
T  16533250 agagagtaaaaatagaatgtgagtatgagagataaagttgtctaaaaattgtcac-aaatggttgtacaaatatcatttatct 16533331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 3089054 - 3088971
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||| ||||||| ||| || ||||||| || |||| ||||||||||| ||||||||||| ||||    
T  3089054 agagagtaagaatataatgtgagtgtgagagagaaaattgtctaaaagttgtcactaaatggttgtacaaatatcatttctctt 3088971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 11742972 - 11743055
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||||||| |||||||||||||| ||| || |||||||||||||| ||||| |||||| |||||| |||| ||||    
T  11742972 agagagtaaaaatataatgtgagtatgagagaaaaaattgtctaaaaattatcaaaaaatagttgtacaaatattatttctctt 11743055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 12044413 - 12044330
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||||||| |||||||||||||| ||| || ||||||| || ||| ||||| |||||||||||||||||| ||||    
T  12044413 agagagtaaaaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtataaatatcatttctctt 12044330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 32729970 - 32729887
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || | ||||| || ||| |||||||||||| ||||||||||| ||||    
T  32729970 agagagtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcagaaaatggttgtacaaatatcatttctctt 32729887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 11785436 - 11785353
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||| ||||||| | ||| || || ||||||| |||||||||||||||| ||||||||||| ||||    
T  11785436 agagaataagaatataatgtgaatatgagatagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctctt 11785353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 21506417 - 21506335
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatct 94  Q
    ||||| |||||| |||| |||||||||||||| ||| || || |||| || ||| |||||||||||| |||||||||||||||    
T  21506417 agagaataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgtcaaaaaatggttgtacaaatatcatttatct 21506335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 32253855 - 32253778
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| |||||||||||||| ||| |||||  |||||||||| ||| |||||||| ||||||||||| ||||    
T  32253855 taagagtataatgtgagtatgagagagaaaattatcacaaaattatcaaaaagtggttgtacaaatatcatttctctt 32253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 6435099 - 6435039
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||||||| || ||||||| || ||||||| |||||||| |||||||||||    
T  6435099 gtgagtatgagagataaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 6435039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 30744316 - 30744240
Alignment:
Q  14 agagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||| |||||||||||||| ||| || | |||||  | |||||||||||||||| ||||| |||||    
T  30744316 agagtaagaatataatgtgagtatgagagacaaagttgtttaaaaggtgtcacaaaatggttgtacaaatagcattt 30744240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 17417225 - 17417308
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||| ||| |||||||||||||| ||| || || ||||||| ||||| |||| ||||| ||||||||||| ||||    
T  17417225 agagaataagaatctaatgtgagtatgagagagaaagttgtccaaaaattgtcacataatgattgtacaaatatcatttctctt 17417308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 23633313 - 23633396
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||||||| ||| || || |||| |||| | ||| |||||||| ||||||||||| ||||    
T  23633313 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagttataataaagtggttgtagaaatatcatttctctt 23633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 9851303 - 9851369
Alignment:
Q  24 tataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||||| ||| ||||| ||| |||||||||||||| ||||| |||| ||||||    
T  9851303 tataatgtgagtatgagagaaaaaattatcaaaatattatcacaaaatgattgtacaaatttcattt 9851369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 26094974 - 26094908
Alignment:
Q  24 tataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||||||||| || |  |||||||  ||||||||||||||| |||||||||||    
T  26094974 tataatgtgagtatgagagataaagttgtacaaaaattgccacaaaatggttgtacaaatatcattt 26094908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 3373817 - 3373776
Alignment:
Q  49 ttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  3373817 ttatctgaaaattatcacaaaatagttgtataaatatcattt 3373776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 10521194 - 10521129
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||||||| ||||| |||| |||||||||| |  ||||| |||||||||||    
T  10521194 ataatgtgagtatgagagataaaattatcaaaaagttatcacaaagtaattgtacaaatatcattt 10521129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 29197801 - 29197724
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    |||||||| ||||  ||| ||||||||| ||| || || |||||||||||||||||| ||||| |||||| |||||||    
T  29197801 agtaagaacataatatgaatatgagagagaaaattgtccaaaaattatcacaaaatgattgtacaaatattatttatc 29197724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 3401122 - 3401083
Alignment:
Q  55 aaaaattatcacaaaatggttgtataaatatcatttatct 94  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  3401122 aaaaattatcacaaaatagttgtacaaatatcatttatct 3401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 7693396 - 7693321
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatca 87  Q
    ||||| ||||||||||| |||||||||||||| ||| || |  ||||||||| | ||| |||||||| ||||||||    
T  7693396 agagaataagaatataatgtgagtatgagagagaaagttgttaaaaaattataataaagtggttgtacaaatatca 7693321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 19789066 - 19789149
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||||||| ||| || || |||| || | | |||||||||||| ||||||||||| ||||    
T  19789066 agagaataagactataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 19789149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 29383638 - 29383555
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||||||| ||| || || |||| || ||| ||| |||||||| ||||||||||| ||||    
T  29383638 agagaataagagtataatgtgagtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctctt 29383555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 8173306 - 8173380
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| |||| ||||| ||| ||| || ||||||| |||||||||| |||||| | |||||||||||    
T  8173306 agtaaaaatataatgtgaatatgaaagagaaaattgtctaaaagttatcacaaagtggttgcacaaatatcattt 8173380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 18272420 - 18272354
Alignment:
Q  17 gtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaat 83  Q
    |||||||||||| |||||| ||||| |  || || |||||||||| |||||||||||||||| ||||    
T  18272420 gtaagaatataatgtgagtttgagaaaggaagttgtctaaaaattgtcacaaaatggttgtacaaat 18272354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 23653887 - 23653960
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| |||||||||||||| ||| || ||||||| |||||| |||| | ||||| |||||||||||    
T  23653887 agtaaaaatataatgtgagtatgagagagaaagttgtctaaaagttatca-aaaaagattgtacaaatatcattt 23653960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 25554314 - 25554248
Alignment:
Q  24 tataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||||| ||| || |  |||||||  ||||||||||||||| |||||||||||    
T  25554314 tataatgtgagtatgagagagaaagttgtaaaaaaattgccacaaaatggttgtacaaatatcattt 25554248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 25995511 - 25995445
Alignment:
Q  24 tataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||||| ||| || |  |||||||  ||||||||||||||| |||||||||||    
T  25995511 tataatgtgagtatgagagagaaagttgtacaaaaattgccacaaaatggttgtacaaatatcattt 25995445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 29173058 - 29172988
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||| |||||||||| | | ||| ||||  |||| |||||| |||||||||||| ||||||||||||||||    
T  29173058 ataatgtgagtatgaaaaagaaagttattaaaaagttatcataaaatggttgtacaaatatcatttatctt 29172988  T

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Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 30906653 - 30906731
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| ||||| |||||||||||||||||| || || |||| || ||| ||||||  |||| |||||||||||    
T  30906653 agagaataagagtataacgtgagtatgagagataaagttgtcaaaaagttgtcataaaatgaatgtagaaatatcattt 30906731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 32457242 - 32457320
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| ||||| ||||||||| |||| ||| || || |||| || ||||||| |||||||| |||||||||||    
T  32457242 agagaataagagtataatgtgagtatgtgagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 32457320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 237406 - 237471
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| ||| || || |||| | ||||||| ||||||||| ||||||||||| ||||    
T  237406 gtgagtatgagagagaaagttgtcaaaaagtaatcacaagatggttgtacaaatatcatttctctt 237471  T

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Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 3339507 - 3339572
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| ||| || |  |||| || |||||||||||||||| ||||||||||| ||||    
T  3339507 gtgagtatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctctt 3339572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3821453 - 3821376
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| || ||||||||||| ||| || || ||||||| | | ||| |||||||| ||||||||||| ||||    
T  3821453 taagaatataatgtaagtatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 3821376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 23775969 - 23776010
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||||  ||||||||||||||||| ||||    
T  23775969 taaaaattatcacaaaataattgtataaatatcatttttctt 23776010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 26668559 - 26668494
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||| ||||| ||| ||||| |||||||||  ||||||| ||||| ||||||||||| ||||    
T  26668559 gtgagtataagagagaaaattatcaaaaaattatagcaaaatgattgtacaaatatcatttctctt 26668494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 28965848 - 28965913
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| ||| || || |||| || | |||||||||||||| ||||||||||| ||||    
T  28965848 gtgagtatgagagagaaagttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctctt 28965913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 31480830 - 31480907
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| |||||||||||||| ||| || || |||  || ||| ||| |||||||| ||||||||||||||||    
T  31480830 taagagtataatgtgagtatgagagaaaaagttgtcaaaatgttgtcagaaagtggttgtacaaatatcatttatctt 31480907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 31934153 - 31934230
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||||||||| ||| ||| || |  ||||||| |  ||||||||||||| ||||||||||| ||||    
T  31934153 taagaatataatgtgagtatgacagagaaaattgttcaaaaattgtatcaaaatggttgtacaaatatcatttgtctt 31934230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 32876500 - 32876541
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||| |||||||||| |||||||| |||||||||||||    
T  32876500 taaaaattgtcacaaaatgattgtataactatcatttatctt 32876541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 1434677 - 1434737
Alignment:
Q  35 tatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||| || || ||||||||||||||| |  ||||| ||||||||||||||||    
T  1434677 tatgagagaaaaaattgtcaaaaaattatcacaaattaattgtacaaatatcatttatctt 1434737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 11635679 - 11635615
Alignment:
Q  31 tgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||| ||| ||||  ||||||||||| ||||| |||||| ||||||||||| ||||    
T  11635679 tgagtatgaaagagaaagttattaaaaaattatcataaaattgttgtacaaatatcatttctctt 11635615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 21443769 - 21443693
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcat 88  Q
    ||||||||| ||||| | |||||||||||||  ||  || ||||||| |||||||||| || ||||| |||||||||    
T  21443769 agagagtaaaaatatgatgtgagtatgagagggaagattgtctaaaagttatcacaaagtgattgtacaaatatcat 21443693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 15283243 - 15283323
Alignment:
Q  15 gagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| |||||||||||||| ||| || |||||||||| ||||||| |||||||| ||||||||||| ||||    
T  15283243 gagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttctctt 15283323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 35792446 - 35792529
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||| | ||| || |||||||||||||||||| | |||||| ||||||||||| ||||    
T  35792446 agagagtaagaatataatgtgagtatgagataaaaagttgtctaaaaattatcacaaagttgttgtacaaatatcatttctctt 35792529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 10288231 - 10288153
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||  ||||||||||||| ||| || |||||||||||||||||||| |||||| |||||||||||    
T  10288231 agagagtaagaatagaatatgagtatgagagaaaaagttgtctaaaaattatcacaaaatagttgtacaaatatcattt 10288153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 13553228 - 13553150
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||||||  ||||||||||||| ||| || || ||||||||||||||| |||||||| |||||||||||    
T  13553228 agagagtaagaatataatatgagtatgagagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcattt 13553150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 1052486 - 1052569
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||| ||||||||||||| || ||||||| || | | |||||||||||| ||||||||||| ||||    
T  1052486 agagagtaagaatataatgtgaatatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctctt 1052569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 8352916 - 8352833
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| |||| | ||||| |||||| ||||||||||| ||||    
T  8352916 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcatttctctt 8352833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 30856885 - 30856810
Alignment:
Q  15 gagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| |||||||||||||| ||| || ||||||| || ||||||| |||||||| |||||||||||    
T  30856885 gagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 30856810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 5167730 - 5167815
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatct--aaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||||||||||||| ||| || |||  ||||||| ||||||| |||||||| ||||||||||| ||||    
T  5167730 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaaaaattgtcacaaagtggttgtacaaatatcatttctctt 5167815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 28165210 - 28165132
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || ||||||| || |||||||||||||||| || ||||||||    
T  28165210 agagattaagaatataatgtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtacaagtatcattt 28165132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 27939235 - 27939160
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatc-taaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||  ||||||||||||||||  ||||| |||||||| ||||||||| ||||||||||||||||||    
T  27939235 agtaaaaatataatatgagtatgagagataatgttatcataaaaattgtcacaaaatagttgtataaatatcattt 27939160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 36133055 - 36132972
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||||||||||| || ||  |||||| ||||||| |||||||| ||||||||||| ||||    
T  36133055 agagaataagagtataatgtgagtatgagagataaagttgtcacaaaattgtcacaaagtggttgtacaaatatcatttctctt 36132972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8555281 - 8555358
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||||| ||| |||| | ||||| |||||||||||    
T  8555281 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtca-aaaaagattgtacaaatatcattt 8555358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 21805776 - 21805854
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| || ||||||||||| ||| || ||||||| || |||| ||||| ||||| |||||||||||    
T  21805776 agagagtaagaatataatgtaagtatgagagagaaaattgtctaaaagttgtcactaaatgattgtacaaatatcattt 21805854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 1889228 - 1889145
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||||||| ||| || || ||||||| ||| ||| |||||||| ||||||||||| ||||    
T  1889228 agagaataagagtataatgtgagtatgagagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctctt 1889145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 3358720 - 3358763
Alignment:
Q  52 tctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||| |||||||||||||||||||||||||||| ||||    
T  3358720 tctaaaaattctcacaaaatggttgtataaatatcatttttctt 3358763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 21738609 - 21738684
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| |||||||||||||| ||| |||||  ||||||||| | |||||||||||| |||||||||||    
T  21738609 agtaaaaatataatgtgagtatgagagagaaaattatcacaaaaattattagaaaatggttgtacaaatatcattt 21738684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 31296835 - 31296918
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| | ||| |||||||||||||||||| || || |||  || |||||||||||||||| ||||||||||| ||||    
T  31296835 agagaataagagtttaacgtgagtatgagagataaagttgtcaaaacgttgtcacaaaatggttgtacaaatatcatttctctt 31296918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 34139028 - 34139111
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||  |||| |||||||||||||||||| || || ||||||||||||||| | | |||| ||||||||||| ||||    
T  34139028 agagaataagaggataatgtgagtatgagagataaaattgtcaaaaaattatcacaaagtagatgtacaaatatcatttctctt 34139111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 2308312 - 2308390
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||||||| || || |||  || ||| ||| |||||||| |||||||||||    
T  2308312 agagaataagaatataatgtgagtatgagagataaagttgtcaaaaggttgtcaaaaattggttgtacaaatatcattt 2308390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 9695051 - 9695129
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| | | |||||||||||||| ||| || || |||||||||| || |||||||||| |||||||||||    
T  9695051 agagaataagaatctcatgtgagtatgagagagaaagttgtccaaaaattatctcataatggttgtacaaatatcattt 9695129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 12600117 - 12600051
Alignment:
Q  24 tataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||||| ||| || ||  |||||||||||||| |||||||| |||||||||||    
T  12600117 tataatgtgagtatgagagagaaagttgtcacaaaattatcacaaagtggttgtacaaatatcattt 12600051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 15678253 - 15678176
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||  | ||||||||| | ||| ||||||||| ||||| | ||||||||||||||||||||||||    
T  15678253 agagaataagaatataatataagtatgagaaaaaaaattatctaaatattataa-aaaatggttgtataaatatcattt 15678176  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 23358573 - 23358647
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||| |||||||||||||| ||| || ||||||| || | | ||||| || |||||||||||||||    
T  23358573 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgttaaaaaattgtagtataaatatcattt 23358647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 34913161 - 34913095
Alignment:
Q  24 tataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||||| ||| |||||||||| |||| | |||||| ||||| |||||||||||    
T  34913161 tataatgtgagtatgagagagaaatttatctaaaagttattaaaaaatgattgtacaaatatcattt 34913095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 3091809 - 3091744
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||| ||| || || |||| |||||||||||| |||||| |||||||||||    
T  3091809 ataatgtgagtatgagagagaaaattgtcaaaaagttatcacaaaatagttgtacaaatatcattt 3091744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 4842515 - 4842584
Alignment:
Q  17 gtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatc 86  Q
    |||||||||||| |||||||||||||| ||| || ||||||| || ||||||| || ||||| |||||||    
T  4842515 gtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtgattgtacaaatatc 4842584  T

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Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 16447246 - 16447319
Alignment:
Q  22 aatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| |||| ||||||||| ||| ||||| ||||||| | | |||||||||||| ||||||||||| ||||    
T  16447246 aatataatgtgaatatgagagagaaaattatcaaaaaattgtaataaaatggttgtacaaatatcatttttctt 16447319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 3959969 - 3959897
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||| |||||||||||||| ||| || | ||||| || ||| |||| ||||||| |||||||||||    
T  3959969 taagaatataatgtgagtatgagagagaaaattgtgtaaaagttgtcaaaaaaaggttgtacaaatatcattt 3959897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 5962701 - 5962641
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||| ||||| || || ||||||||||||| |||| ||||| |||||||||||    
T  5962701 gtgagtatgagaaataaagttgtccaaaaattatcacataatgattgtacaaatatcattt 5962641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 32688540 - 32688612
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| |||||||||||||| ||| || || ||||||| ||| ||| |||||||| |||||||||||    
T  32688540 taagagtataatgtgagtatgagagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcattt 32688612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 33002857 - 33002813
Alignment:
Q  55 aaaaattatcacaaaatggttgtataaatatcatttatcttgtat 99  Q
    ||||||| |||| ||||||||||||||||||||||| ||||||||    
T  33002857 aaaaattgtcactaaatggttgtataaatatcatttctcttgtat 33002813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 7497981 - 7498064
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| ||||||| |||||||||||||| ||| || || |||| || | | |||||||||||| ||||||||||| ||||    
T  7497981 agagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctctt 7498064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8329870 - 8329946
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||||||  | | ||||||||| ||  || || ||||||||||||||||| ||| ||||||||||||||    
T  8329870 agagagtaagaatataatataaatatgagagagaa--ttgtccaaaaattatcacaaaatagttatataaatatcattt 8329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 12784392 - 12784467
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| |||||||||||||| ||| || ||  ||||||||| | |||||||||||| |||||||||||    
T  12784392 agtaaaaatataacgtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcattt 12784467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 17267685 - 17267720
Alignment:
Q  55 aaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17267685 aaaaattgtcacaaaatggttgtataaatatcattt 17267720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 18508159 - 18508076
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||| |||| |||||||||||||| ||  ||||  |||| |||||| ||||||| |||| ||||||||||| ||||    
T  18508159 agagaataagaagataatgtgagtatgagagagaatgttatacaaaagttatcataaaatggatgtacaaatatcatttctctt 18508076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 41840613 - 41840648
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcatt 89  Q
    |||||||||||| |||||||||||||||||||||||    
T  41840613 taaaaattatcataaaatggttgtataaatatcatt 41840648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 5361871 - 5361798
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| |||||||||||||| ||| || || ||||||||| | |||||| ||||| |||||||||||    
T  5361871 agtaaaaatataatgtgagtatgagagagaaaattgtc-aaaaattattagaaaatgattgtacaaatatcattt 5361798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 13850174 - 13850252
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| |||||||||||||| ||| || |  |||||||||  ||||||| |||||||||||||||||    
T  13850174 agagaataaaaacataatgtgagtatgagagagaaagttgtacaaaaattatatcaaaatgattgtataaatatcattt 13850252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 24766230 - 24766148
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatctaaaaa-ttatcacaaaatggttgtataaatatcatttatcttgt 97  Q
    ||||| ||||||| ||||||||| |||||||| || ||  |||| |||| | |||||||||||| ||||||||||| ||||||    
T  24766230 agtaaaaatataatgtgagtatgcgagataaagttgtcacaaaagttattaaaaaatggttgtacaaatatcatttctcttgt 24766148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 26321687 - 26321765
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||||||||| |||  || || || |||| ||||||||||||||||||| |||||||||||    
T  26321687 agagaataagatgataatgtgagtatgatagaggaaattgtcaaaaagttatcacaaaatggttgtacaaatatcattt 26321765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 29192641 - 29192719
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| |||||||  | ||||| ||||| ||| ||||| ||||||||| | |||||||||||| |||||||||||    
T  29192641 agagaataaaaatataatataagtataagagagaaaattatcaaaaaattattaaaaaatggttgtacaaatatcattt 29192719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 34373086 - 34373008
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| |||||||||||||| ||| || |  |||||||||  ||||||||||||| |||||||||||    
T  34373086 agagaataaaaacataatgtgagtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcattt 34373008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 36587458 - 36587536
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| |  |||| |||||||||||||| ||| || || ||||||| ||| |||||||||||  |||||||||||    
T  36587458 agagagtaaaatgataatgtgagtatgagagagaaagttgtcaaaaaattgtcaaaaaatggttgttcaaatatcattt 36587536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 36763514 - 36763591
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||| ||| ||| || | ||||| |||||| ||||  |||||| |||||||||||    
T  36763514 agagagtaagaatataatgtgagtatgaaagagaaagttgtataaaagttatca-aaaaaagttgtacaaatatcattt 36763591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 39454237 - 39454307
Alignment:
Q  20 agaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| | ||||||| |||| ||| ||||| |||| || ||||||||||||| || |||||||||||    
T  39454237 agaatataatgcgagtatgtgagagaaaattatcaaaaagttgtcacaaaatggttatacaaatatcattt 39454307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 44018256 - 44018314
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcat 88  Q
    |||||||||||||||| | || || |||| || |||||||||||||||| |||||||||    
T  44018256 gtgagtatgagagatatatttgtccaaaagttgtcacaaaatggttgtaaaaatatcat 44018314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 11442752 - 11442675
Alignment:
Q  13 gagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||  ||||||||||||| ||| || || ||||||| | |  ||||||||||| |||||||||||    
T  11442752 gagaataagaatataatatgagtatgagagagaaagttgtcaaaaaattgtaatgaaatggttgtacaaatatcattt 11442675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 19529581 - 19529540
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| || |||||||||||||||||||||||||||| ||||    
T  19529581 taaaagttgtcacaaaatggttgtataaatatcatttttctt 19529540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 34144559 - 34144624
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| ||| || |  ||||||| ||||||| |||||||| ||||||||||| ||||    
T  34144559 gtgagtatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttctctt 34144624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 34442194 - 34442109
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttgt 97  Q
    ||||| ||||| |||||  |||||||| |||| ||  || || ||||||||||| ||| |||||||| ||||||||||| ||||||    
T  34442194 agagaataagagtataatatgagtatgtgagagaatgttgtcaaaaaattatcataaagtggttgtacaaatatcatttctcttgt 34442109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 35171234 - 35171299
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||| ||| || |   |||||| |||||||||||||||| ||||||||||| ||||    
T  35171234 gtgagtatgagagagaaagttgtaccaaaattgtcacaaaatggttgtacaaatatcatttctctt 35171299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 35965650 - 35965573
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||||||||| ||| ||| || || ||||||| | | ||| |||||||| ||||||||||| ||||    
T  35965650 taagaatataatgtgagtatgaaagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttttctt 35965573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 41353493 - 41353570
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| |||||||||||||| ||| || |  ||||||||||| ||| || ||||| ||||||||||| ||||    
T  41353493 taagagtataatgtgagtatgagagagaaagttgttaaaaaattatcataaattgattgtacaaatatcatttctctt 41353570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 44085337 - 44085272
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| || | ||| || || ||||||| |||||||||  ||||||||||||||||||||||    
T  44085337 gtgagtatgtgatagaaaattgtccaaaaattgtcacaaaataattgtataaatatcatttatctt 44085272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 6365261 - 6365189
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| |||| |||| |||| ||| || || ||||||| ||||||| |||||||| |||||||||||    
T  6365261 taagagtataatgtgaatatgtgagagaaaattgtcaaaaaattgtcacaaagtggttgtacaaatatcattt 6365189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 6884973 - 6884913
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || | ||||| |||||||||| | |||||| |||||||||||    
T  6884973 gtgagtatgagagagaaagttgtataaaagttatcacaaattagttgtacaaatatcattt 6884913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 13711136 - 13711064
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| |||||||||||||| ||| || ||  ||| |||||| ||| |||||||| |||||||||||    
T  13711136 taagagtataatgtgagtatgagagagaaagttgtcacaaagttatcaaaaagtggttgtacaaatatcattt 13711064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 23048091 - 23048151
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| ||||  |||||||||| |||| || ||||| |||||||||||    
T  23048091 gtgagtatgagagagaaagttatacaaaaattatctcaaattgattgtacaaatatcattt 23048151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 26321873 - 26321933
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||| |||  || || || |||| ||||||||||||||||||| |||||||||||    
T  26321873 gtgagtatgatagaggaaattgtcaaaaagttatcacaaaatggttgtacaaatatcattt 26321933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 31635806 - 31635878
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||| |||| |||||||||||||| ||| || || |||| || | | |||||||||||| |||||||||||    
T  31635806 taagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcattt 31635878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 33030111 - 33030171
Alignment:
Q  31 tgagtatgagagataaacttatctaaaaattatcacaaaat-ggttgtataaatatcattt 90  Q
    |||||| |||||| ||| || || ||||||||||||||||| ||||||| |||||||||||    
T  33030111 tgagtacgagagagaaagttgtcaaaaaattatcacaaaatgggttgtacaaatatcattt 33030171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 36909851 - 36909911
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| |||| ||| || || |||| || |||||||||||||||| |||||||||||    
T  36909851 gtgagtatgtgagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcattt 36909911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 44484664 - 44484724
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || |  ||||||| | |||||||||||||| |||||||||||    
T  44484664 gtgagtatgagagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcattt 44484724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 15639466 - 15639388
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| || |||| ||||||||||| |||||||||||    
T  15639466 agagagtaagaatataatgtgagtatgagagaaaaagttgtctaaaagttgtcaccaaatggttgtacaaatatcattt 15639388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 5698318 - 5698401
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||| ||||||| |||||||||||| | ||| |||||||||| |||| |||||||||||||| |||||| |||| ||||    
T  5698318 agagagtaaaaatataatgtgagtatgagaaagaaagttatctaaaagttattacaaaatggttgtacaaatatgatttctctt 5698401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 7144658 - 7144575
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||||||  ||||||||||||| ||| || | ||||| |||||| |||||||||||| ||||||||||| ||||    
T  7144658 agagagtaagaatataatatgagtatgagagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcatttctctt 7144575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 36624399 - 36624321
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| || ||||||| |||||||||| ||  |||| |||||||||||    
T  36624399 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttatcacaaagtgaatgtacaaatatcattt 36624321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 41460197 - 41460119
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||||||| || | ||||| || ||| |||||| |||||||||||||||||    
T  41460197 agagaataagaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtataaatatcattt 41460119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 582857 - 582935
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||||||||  ||||||||||||| ||| || | ||||| |||||||||||| |||||| |||||||||||    
T  582857 agagaataagaatataatatgagtatgagagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcattt 582935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 36581455 - 36581533
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| |||| ||  ||||||| ||||| ||| || |||||||||||||||||| |||||||| |||||||||||    
T  36581455 agagagtaaaaataaaatatgagtataagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcattt 36581533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 28904071 - 28903994
Alignment:
Q  13 gagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||| || |||||||||||||| ||| || ||||||| || ||||||  |||||||| |||||||||||    
T  28904071 gagagtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcattt 28903994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 28940466 - 28940389
Alignment:
Q  13 gagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||| || |||||||||||||| ||| || ||||||| || ||||||  |||||||| |||||||||||    
T  28940466 gagagtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcattt 28940389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 35098724 - 35098805
Alignment:
Q  14 agagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||||||||||  ||||||||||||| ||| || | ||||  |||||| |||||||||||| ||||||||||| ||||    
T  35098724 agagtaagaatataatatgagtatgagagaaaaaattgtttaaatgttatcaaaaaatggttgtacaaatatcatttctctt 35098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 18638815 - 18638898
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||||||||||| || || |||| || | | |||||||||||  ||||||||||| ||||    
T  18638815 agagaataagaatataatgtgagtatgagagataaatttgtcaaaaagttgtaataaaatggttgtgcaaatatcatttctctt 18638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 19376122 - 19376205
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||| ||||| |||||||||||||| ||| ||||| |||| || ||| ||| |||||||| ||||||||||| ||||    
T  19376122 agagaataagagtataatgtgagtatgagagagaaagttatcaaaaagttgtcagaaagtggttgtacaaatatcatttctctt 19376205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 19437338 - 19437255
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||| ||||||||| |||| ||||||||| ||| || | ||||  ||||||||||||||||||| || |||||||| ||||    
T  19437338 agagagtcagaatataatgtgaatatgagagagaaagttgtttaaaggttatcacaaaatggttgtacaagtatcatttctctt 19437255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 29803306 - 29803223
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| |||| ||||||||| ||| || | ||||| || ||| ||||| |||||| ||||||||||| ||||    
T  29803306 agagagtaagaatataatgtgaatatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 29803223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8787146 - 8787224
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||| ||||||||| |||||| || |||||||||||| |||| |||||| |||||||||||    
T  8787146 agagaataagatgataatgtgaatatgagagaaaaacttgtcaaaaaattatcactaaattgttgtacaaatatcattt 8787224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 12779596 - 12779674
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| |||||||||||||||||| || || |||| || ||||||| |||||||| |||||||||||    
T  12779596 agagaataaaaacataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcattt 12779674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 17063946 - 17063868
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| ||||||| |||||||||||||||||| || | ||||| || ||| |||||| ||||| |||||||||||    
T  17063946 agagaataaaaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtacaaatatcattt 17063868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 17489411 - 17489349
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttat 92  Q
    |||||||||||||| ||| || | |||||||||||| ||||| |||||| |||||||||||||    
T  17489411 gtgagtatgagagagaaaattgtgtaaaaattatcaaaaaatagttgtacaaatatcatttat 17489349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 27340950 - 27340872
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || || ||||||||| | ||| || ||||| |||||||||||    
T  27340950 agagaataagaatataatgtgagtatgagagagaaaattgtcaaaaaattataataaagtgattgtacaaatatcattt 27340872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 3141576 - 3141495
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatc 93  Q
    ||||| |||||  |||| |||||||||| |||  || || || ||||||| ||||||| |||||||||||||||||||||||    
T  3141576 agagaataagatgataatgtgagtatgatagaggaagttgtcaaaaaattgtcacaaagtggttgtataaatatcatttatc 3141495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 5996742 - 5996665
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||| ||||||||| ||| || |||||||||| | | ||||| |||||| ||||||||||| ||||    
T  5996742 taagaatataatgtgaatatgagagagaaaattgtctaaaaattgttaaaaaatagttgtacaaatatcatttctctt 5996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 9636148 - 9636225
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatt 89  Q
    |||| |||||||||||| |||||||||||||| ||| ||  |||||| ||  |||||| |||||||| ||||||||||    
T  9636148 agagggtaagaatataatgtgagtatgagagagaaagttgcctaaaagttggcacaaagtggttgtacaaatatcatt 9636225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 38501018 - 38500941
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||  ||||||||| ||| ||| || || ||||||| |||||||||||||||| ||||||||||| ||||    
T  38501018 taagagtataatatgagtatgaaagagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctctt 38500941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 7927392 - 7927353
Alignment:
Q  56 aaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  7927392 aaaattatcacaaaatgattgtataaatatcatttctctt 7927353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 20591464 - 20591547
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||||||||||| |||||||||||||| ||| || || ||||||| ||| ||| ||| |||| | ||||||||| ||||    
T  20591464 agagattaagaatataacgtgagtatgagagagaaagttgtcaaaaaattgtcaaaaagtggatgtacatatatcatttctctt 20591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 20985519 - 20985602
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||| |||| |||||||||||||| ||| || |  |||||||||   |||||||||||| ||||||||||| ||||    
T  20985519 agagaataagaagataatgtgagtatgagagagaaagttgtacaaaaattatacaaaaatggttgtacaaatatcatttctctt 20985602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 26660401 - 26660484
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| ||||||| |||||||||||||| ||| || || | || || ||||||||||| |||| ||||||||||| ||||    
T  26660401 agagaataaaaatataatgtgagtatgagagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctctt 26660484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 26931993 - 26932076
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| ||| ||||||| |||||||||||||| ||| || || | || || ||||||||||| |||| ||||||||||| ||||    
T  26931993 agagaataaaaatataatgtgagtatgagagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctctt 26932076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 34428241 - 34428158
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||||| ||| |||||||| ||| | ||| || ||||||| || ||| ||||| |||||| ||||||||||| ||||    
T  34428241 agagagtaagaatctaatgtgagtataagaaaaaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 34428158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 40829492 - 40829417
Alignment:
Q  16 agtaagaatataaagtgagtatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| |||||||||||||| ||| || ||  ||||||||| | |||||||||||| |||||||||||    
T  40829492 agtaaaaatataatgtgagtatgagagaaaaaattgtcacaaaaattattaaaaaatggttgtacaaatatcattt 40829417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 2456107 - 2456029
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||| | ||| || || ||||||| | | ||||| |||||||| |||||||||    
T  2456107 agagaataagaatataatgtgagtatgagatagaaagttgtcaaaaaattgttataaaatagttgtatagatatcattt 2456029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 11880977 - 11881055
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||| |||| |||||||||||||| ||| || ||||||| || | | |||||  ||||| |||||||||||    
T  11880977 agagagtaagaagataatgtgagtatgagagagaaagttgtctaaaagttgttaaaaaataattgtacaaatatcattt 11881055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 12718370 - 12718448
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| || |||| |||| ||||||||||||| || || |||| || ||||||| |||||||| |||||||||||    
T  12718370 agagaataaaaacataatgtgaatatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcattt 12718448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 19827364 - 19827442
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||| ||| | |||||||||||||||||| || || ||||||| ||||||| ||||| || | |||||||||    
T  19827364 agagaataagagtatcatgtgagtatgagagataaaattgtcaaaaaattgtcacaaagtggttatacagatatcattt 19827442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 31024995 - 31025073
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || |  ||||||| ||| ||  |||||||| |||||||||||    
T  31024995 agagaataagaatataatgtgagtatgagagagaaagttgttaaaaaattgtcataatgtggttgtacaaatatcattt 31025073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 34381093 - 34381015
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||||||||||||| ||| || || |||| || ||||||| |||||||| |||||||||||    
T  34381093 agagaataagagaataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 34381015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 36713168 - 36713246
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| ||||||| |||||||||||||| ||| || || | || || ||||||| |||||||| |||||||||||    
T  36713168 agagaataaaaatataatgtgagtatgagagagaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcattt 36713246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 39595353 - 39595275
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| |||||  |||| |||||||||||||| ||| || || |||| || ||||||| |||||||| |||||||||||    
T  39595353 agagaataagagaataacgtgagtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcattt 39595275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 91296 - 91239
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaa 69  Q
    ||||||||||||||||| |||||||||||||| ||| || || |||| || |||||||    
T  91296 agagagtaagaatataatgtgagtatgagagagaaagttgtccaaaagttgtcacaaa 91239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 4434520 - 4434471
Alignment:
Q  55 aaaaattatcacaaaatggttgtataaatatcatttatcttgtataaata 104  Q
    ||||||| ||| |||||||||||| ||||||||||| |||| ||||||||    
T  4434520 aaaaattgtcaaaaaatggttgtacaaatatcatttctcttttataaata 4434471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 12661950 - 12662015
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||| |||||||||||||| ||| || || ||||||| ||||||| ||| |||| |||||||||||    
T  12661950 ataatgtgagtatgagagagaaagttgtcaaaaaattgtcacaaagtggatgtacaaatatcattt 12662015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 2050990 - 2050930
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||| |||||||| || || ||||||| | |||||||||||||| |||||||||||    
T  2050990 gtgagcatgtgagataaagttgtccaaaaattgttacaaaatggttgtacaaatatcattt 2050930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 7077350 - 7077410
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||| | ||| ||||| |||| || | |||||||||||||| |||||||||||    
T  7077350 gtgagtatgagaaagaaagttatcaaaaagttgtaacaaaatggttgtacaaatatcattt 7077410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 8087874 - 8087802
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||| ||||| |||||||| ||| || || ||||||||| | ||| |||||||| |||||| ||||    
T  8087874 taagaatataatgtgagcatgagagaaaaagttgtcaaaaaattattagaaagtggttgtacaaatattattt 8087802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 19271922 - 19271862
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || ||||||  || | |||||||||||||| |||||||||||    
T  19271922 gtgagtatgagagagaaagttgtctaaacgttgttacaaaatggttgtacaaatatcattt 19271862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 21353519 - 21353590
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttgt 97  Q
    |||| |||||||||||| ||||| |||| || |||||||||||||||  ||||| || |||||||| ||||||    
T  21353519 ataatgtgagtatgagaaataaaattat-tacaaattatcacaaaataattgtacaagtatcatttctcttgt 21353590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 36416058 - 36416130
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||| |||| ||||||||| |||| ||| || || ||||||| | | |||||||||||| |||||||||||    
T  36416058 taagaagataatgtgagtatgtgagagaaagttgtcaaaaaattgttagaaaatggttgtacaaatatcattt 36416130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 39788714 - 39788774
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || || |||| || ||||| |||||||||| |||||||||||    
T  39788714 gtgagtatgagagagaaagttgtccaaaagttgtcacataatggttgtacaaatatcattt 39788774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 337199 - 337121
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||||||||||| |||||||||||||| ||| ||||  |||| || ||| |||||||||||| |||||||||||    
T  337199 agagagtaagaatataatgtgagtatgagagagaaagttattcaaaagttgtcagaaaatggttgtacaaatatcattt 337121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 4396 - 4318
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||| | ||| || || |||| |||||| |||||||||||| |||||||||||    
T  4396 agagaataagaatataatgtgagtatgagatagaaagttgtcaaaaagttatcataaaatggttgtacaaatatcattt 4318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 3935 - 3991
Alignment:
Q  35 tatgagagataaacttatct-aaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||||||| ||| |||||| |||||||||||||||||| |||||||||||||||||    
T  3935 tatgagagagaaaattatctcaaaaattatcacaaaatgattgtataaatatcattt 3991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 10725 - 10803
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| |||||||||||||| ||| || || ||||||| | | ||| |||||||| |||||||||||    
T  10725 agagaataagaatataatgtgagtatgagagaaaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 10803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 17517 - 17439
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||  ||| |||||||||| | ||||| || |||||||||| | |||||||||||||| |||||||||||    
T  17517 agagaataagaaactaatgtgagtatgaaacataaagttgtctaaaaattgtgacaaaatggttgtacaaatatcattt 17439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 440799 - 440721
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| || |||||||||||||| ||| || ||||||| || ||| ||| | |||||| |||||||||||    
T  440799 agagagtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcataaagtagttgtacaaatatcattt 440721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 199341 - 199264
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||||||||| |||||||||||||| ||| || || ||||||| | | ||| |||||||| ||||||||||| ||||    
T  199341 taagaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctt 199264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 3647 - 3683
Alignment:
Q  54 taaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3647 taaaaattatcacaaaatggttgtttaaatatcattt 3683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 27420 - 27337
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||  |||| |||||||||||||| ||| || || ||||||| ||||||||||| |||| | ||||||||| ||||    
T  27420 agagaataagaggataatgtgagtatgagagagaaagttgtcaaaaaattgtcacaaaatggatgtacatatatcatttctctt 27337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 36083 - 36000
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    ||||| |||||  |||| |||||||| ||||| ||| || || ||||||||||||||| | |||||| ||||||||||| ||||    
T  36083 agagaataagagaataatgtgagtataagagagaaagttgtcaaaaaattatcacaaagtagttgtacaaatatcatttctctt 36000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 978 - 908
Alignment:
Q  25 ataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||| |||||||||||||| ||| ||||  |||||||||  |||| |||||||| ||||||||||| ||||    
T  978 ataatgtgagtatgagagagaaaattatacaaaaattatatcaaattggttgtacaaatatcatttctctt 908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 2494 - 2572
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||| | | |||||||||||||| ||| || || ||||||||||||| ||| | |||| |||||||||||    
T  2494 agagaataagaatctcatgtgagtatgagagagaaagttgtccaaaaattatcacataatagatgtacaaatatcattt 2572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 17322 - 17392
Alignment:
Q  14 agagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaata 84  Q
    ||||||||||| ||| || ||||||||||| ||| |||| ||||| |||| ||||||| |||||| |||||    
T  17322 agagtaagaatgtaatgtaagtatgagagaaaaaattatttaaaagttattacaaaatagttgtacaaata 17392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 155987 - 155909
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    ||||| ||||||||||| ||||||| |||||| ||| || || |||| || | | |||||||||||| |||||||||||    
T  155987 agagaataagaatataatgtgagtacgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcattt 155909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 2234 - 2299
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatctt 95  Q
    |||||||| ||||| ||| ||||| |||||||||  ||||||| ||||| ||||||||||| ||||    
T  2234 gtgagtataagagagaaaattatcaaaaaattatagcaaaatgattgtacaaatatcatttctctt 2299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 11289 - 11207
Alignment:
Q  12 agagagtaagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatcttg 96  Q
    ||||| ||||| ||||| ||||||||| |||| ||| || ||  |||||| ||||||||||||||||  |||||||||| |||||    
T  11289 agagaataagagtataatgtgagtatgtgagagaaaattgtc--aaaattgtcacaaaatggttgtaccaatatcatttctcttg 11207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 34483 - 34407
Alignment:
Q  18 taagaatataaagtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcatttatct 94  Q
    ||||| ||||| |||||||||||||| ||| || ||  ||| || ||| ||||| |||||| |||||||||||||||    
T  34483 taagagtataatgtgagtatgagagagaaagttgtcacaaagttgtcaaaaaatagttgtacaaatatcatttatct 34407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 18658 - 18598
Alignment:
Q  30 gtgagtatgagagataaacttatctaaaaattatcacaaaatggttgtataaatatcattt 90  Q
    |||||||||||||| ||| || |  |||| |||||||||| |||||||| |||||||||||    
T  18658 gtgagtatgagagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcattt 18598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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