View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0243_low_45 (Length: 337)

Name: NF0243_low_45
Description: NF0243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0243_low_45
NF0243_low_45
[»] chr1 (51 HSPs)
chr1 (26-234)||(46783406-46783614)
chr1 (198-330)||(46783276-46783408)
chr1 (137-318)||(3090960-3091145)
chr1 (139-329)||(14997173-14997366)
chr1 (136-309)||(20566511-20566690)
chr1 (222-330)||(4144627-4144735)
chr1 (137-238)||(9314499-9314602)
chr1 (256-323)||(2401199-2401266)
chr1 (137-330)||(25134201-25134399)
chr1 (256-330)||(2393261-2393334)
chr1 (264-330)||(21353334-21353400)
chr1 (135-206)||(28279624-28279697)
chr1 (275-328)||(15916621-15916674)
chr1 (262-328)||(51757760-51757827)
chr1 (272-328)||(27339127-27339182)
chr1 (264-330)||(2232720-2232787)
chr1 (264-330)||(9526596-9526663)
chr1 (265-328)||(17324294-17324356)
chr1 (256-328)||(23786069-23786142)
chr1 (137-171)||(13426797-13426831)
chr1 (272-326)||(28998249-28998302)
chr1 (272-326)||(29003965-29004018)
chr1 (272-330)||(39462747-39462804)
chr1 (262-328)||(2510309-2510376)
chr1 (275-328)||(6115101-6115153)
chr1 (137-189)||(9526741-9526796)
chr1 (262-328)||(10399812-10399879)
chr1 (262-328)||(13358803-13358870)
chr1 (275-328)||(14183589-14183642)
chr1 (262-328)||(15294818-15294885)
chr1 (135-217)||(26613092-26613176)
chr1 (275-328)||(27916727-27916780)
chr1 (262-328)||(28840909-28840976)
chr1 (262-328)||(31735505-31735572)
chr1 (262-328)||(51750269-51750336)
chr1 (262-328)||(51752593-51752660)
chr1 (272-328)||(6823244-6823299)
chr1 (272-328)||(6995696-6995751)
chr1 (137-204)||(11693170-11693238)
chr1 (272-328)||(12302501-12302556)
chr1 (272-328)||(17186123-17186178)
chr1 (272-328)||(17324632-17324687)
chr1 (262-323)||(20302693-20302755)
chr1 (275-323)||(26613237-26613285)
chr1 (272-328)||(27336936-27336991)
chr1 (272-328)||(28207064-28207119)
chr1 (262-323)||(28842729-28842791)
chr1 (253-293)||(32261399-32261439)
chr1 (272-328)||(40134175-40134230)
chr1 (272-328)||(50078816-50078871)
chr1 (272-328)||(50307542-50307597)
[»] chr5 (40 HSPs)
chr5 (154-330)||(26406341-26406518)
chr5 (137-323)||(31782311-31782500)
chr5 (158-330)||(10627496-10627672)
chr5 (137-330)||(22672964-22673163)
chr5 (222-330)||(42238390-42238499)
chr5 (264-330)||(25452625-25452691)
chr5 (222-330)||(17841192-17841301)
chr5 (264-330)||(25445626-25445692)
chr5 (260-323)||(28786541-28786604)
chr5 (265-324)||(37705767-37705825)
chr5 (256-330)||(1240558-1240632)
chr5 (256-328)||(10749930-10750002)
chr5 (264-330)||(1170940-1171007)
chr5 (264-330)||(2297986-2298053)
chr5 (256-328)||(15354551-15354624)
chr5 (267-330)||(18466912-18466974)
chr5 (262-330)||(25921455-25921524)
chr5 (262-330)||(27910678-27910747)
chr5 (253-309)||(34033539-34033597)
chr5 (264-330)||(35385437-35385504)
chr5 (272-323)||(36402322-36402372)
chr5 (134-184)||(658201-658253)
chr5 (262-328)||(2175148-2175215)
chr5 (137-181)||(4237020-4237065)
chr5 (256-328)||(10757406-10757478)
chr5 (257-330)||(11962412-11962485)
chr5 (262-328)||(21684434-21684501)
chr5 (262-328)||(34477035-34477102)
chr5 (262-328)||(34479400-34479467)
chr5 (262-328)||(39798277-39798344)
chr5 (272-328)||(2724123-2724178)
chr5 (137-184)||(4410410-4410458)
chr5 (272-328)||(10474317-10474372)
chr5 (272-328)||(10529093-10529148)
chr5 (272-328)||(18511206-18511261)
chr5 (272-328)||(24127086-24127141)
chr5 (275-323)||(25904338-25904385)
chr5 (262-323)||(27912771-27912833)
chr5 (137-189)||(34033422-34033474)
chr5 (272-328)||(39854713-39854768)
[»] chr4 (50 HSPs)
chr4 (137-286)||(32273806-32273959)
chr4 (137-330)||(25613810-25614008)
chr4 (137-317)||(4874336-4874518)
chr4 (157-330)||(5336656-5336832)
chr4 (158-330)||(4555938-4556112)
chr4 (264-330)||(8529397-8529463)
chr4 (264-330)||(18587096-18587162)
chr4 (265-330)||(4885004-4885069)
chr4 (262-323)||(14789412-14789472)
chr4 (257-330)||(36769609-36769682)
chr4 (257-330)||(36771526-36771599)
chr4 (137-330)||(4570224-4570420)
chr4 (275-330)||(10114599-10114654)
chr4 (275-330)||(26557867-26557922)
chr4 (264-330)||(15312446-15312512)
chr4 (265-323)||(16455531-16455588)
chr4 (132-322)||(16638965-16639159)
chr4 (262-328)||(11006219-11006286)
chr4 (262-328)||(11008550-11008617)
chr4 (262-323)||(14787413-14787473)
chr4 (251-328)||(36380634-36380713)
chr4 (134-184)||(2484712-2484763)
chr4 (134-184)||(17662089-17662140)
chr4 (222-323)||(4558448-4558549)
chr4 (137-184)||(5664673-5664722)
chr4 (264-330)||(15317088-15317153)
chr4 (137-184)||(19323128-19323177)
chr4 (139-189)||(5516090-5516142)
chr4 (262-328)||(5635458-5635525)
chr4 (262-328)||(6765128-6765195)
chr4 (262-328)||(8631401-8631468)
chr4 (275-328)||(12102372-12102425)
chr4 (275-328)||(13547438-13547490)
chr4 (275-328)||(16185831-16185884)
chr4 (265-330)||(16688927-16688992)
chr4 (268-329)||(25357925-25357986)
chr4 (275-328)||(36378577-36378629)
chr4 (137-187)||(36380782-36380834)
chr4 (262-328)||(37089354-37089421)
chr4 (272-328)||(4215590-4215645)
chr4 (278-330)||(5143263-5143314)
chr4 (137-184)||(5198847-5198895)
chr4 (272-328)||(7941607-7941662)
chr4 (267-330)||(11853678-11853742)
chr4 (272-328)||(17662239-17662294)
chr4 (272-328)||(22800856-22800911)
chr4 (272-328)||(24889080-24889135)
chr4 (275-323)||(28453972-28454020)
chr4 (272-328)||(38928171-38928226)
chr4 (272-328)||(40637358-40637413)
[»] chr8 (31 HSPs)
chr8 (139-321)||(28228656-28228842)
chr8 (137-330)||(30423345-30423541)
chr8 (137-246)||(15944878-15944987)
chr8 (140-228)||(15949770-15949859)
chr8 (137-329)||(23179410-23179612)
chr8 (137-258)||(2266936-2267058)
chr8 (257-330)||(17799403-17799476)
chr8 (264-330)||(590924-590990)
chr8 (265-323)||(3005617-3005675)
chr8 (264-330)||(9021093-9021159)
chr8 (257-293)||(3276465-3276501)
chr8 (272-328)||(41382948-41383003)
chr8 (264-330)||(16757253-16757320)
chr8 (264-330)||(25684772-25684839)
chr8 (264-330)||(28328037-28328104)
chr8 (264-330)||(28890895-28890962)
chr8 (137-189)||(31035548-31035602)
chr8 (137-184)||(3005486-3005535)
chr8 (262-328)||(3874296-3874363)
chr8 (262-328)||(4424304-4424371)
chr8 (262-328)||(18813167-18813234)
chr8 (262-328)||(22684635-22684702)
chr8 (262-328)||(27829582-27829649)
chr8 (262-328)||(32339595-32339662)
chr8 (272-328)||(13858478-13858533)
chr8 (272-328)||(14419184-14419239)
chr8 (272-328)||(25952807-25952862)
chr8 (222-285)||(26268174-26268238)
chr8 (272-328)||(30480497-30480552)
chr8 (275-328)||(31035404-31035459)
chr8 (275-323)||(31162503-31162551)
[»] chr3 (58 HSPs)
chr3 (137-330)||(15823510-15823699)
chr3 (136-317)||(46966501-46966687)
chr3 (190-323)||(13893601-13893732)
chr3 (137-330)||(11079647-11079845)
chr3 (256-330)||(10897135-10897209)
chr3 (158-330)||(47878050-47878223)
chr3 (267-323)||(28761414-28761470)
chr3 (158-329)||(47882761-47882933)
chr3 (222-319)||(27761929-27762027)
chr3 (264-330)||(29913941-29914007)
chr3 (265-330)||(10612765-10612830)
chr3 (257-330)||(48390281-48390354)
chr3 (256-328)||(53894031-53894104)
chr3 (264-330)||(5858674-5858739)
chr3 (264-330)||(10595020-10595086)
chr3 (272-330)||(48361663-48361720)
chr3 (257-330)||(10949239-10949312)
chr3 (137-183)||(14634291-14634339)
chr3 (257-330)||(20031296-20031369)
chr3 (257-326)||(38003003-38003072)
chr3 (262-328)||(51726987-51727054)
chr3 (265-328)||(43226295-43226357)
chr3 (264-330)||(54193356-54193423)
chr3 (265-330)||(4535744-4535810)
chr3 (228-320)||(16997017-16997112)
chr3 (137-204)||(31021012-31021081)
chr3 (262-328)||(1321689-1321756)
chr3 (257-330)||(3330023-3330095)
chr3 (262-328)||(3859737-3859804)
chr3 (262-328)||(7606568-7606635)
chr3 (247-328)||(9604571-9604654)
chr3 (262-330)||(10094058-10094127)
chr3 (262-330)||(10100075-10100144)
chr3 (262-330)||(10200938-10201007)
chr3 (274-323)||(27420866-27420915)
chr3 (262-328)||(35919095-35919162)
chr3 (275-328)||(36871295-36871348)
chr3 (137-184)||(456277-456325)
chr3 (137-184)||(458654-458702)
chr3 (272-328)||(1313619-1313674)
chr3 (137-184)||(5522466-5522514)
chr3 (272-328)||(5886408-5886463)
chr3 (272-328)||(5899881-5899936)
chr3 (272-328)||(6484570-6484625)
chr3 (137-184)||(10955867-10955915)
chr3 (137-184)||(10958163-10958211)
chr3 (272-328)||(10958315-10958370)
chr3 (278-330)||(16264354-16264405)
chr3 (264-323)||(22625969-22626029)
chr3 (272-328)||(24979918-24979973)
chr3 (278-330)||(25795785-25795836)
chr3 (272-328)||(27101173-27101228)
chr3 (272-328)||(27635650-27635705)
chr3 (278-330)||(32143325-32143376)
chr3 (272-328)||(41849269-41849324)
chr3 (272-328)||(42990514-42990569)
chr3 (272-328)||(43421407-43421462)
chr3 (272-328)||(47701663-47701718)
[»] chr7 (46 HSPs)
chr7 (137-309)||(45366739-45366911)
chr7 (256-330)||(34546858-34546932)
chr7 (256-330)||(7464497-7464571)
chr7 (264-330)||(25351481-25351547)
chr7 (222-330)||(44010693-44010802)
chr7 (137-330)||(2121029-2121229)
chr7 (260-329)||(2075246-2075315)
chr7 (257-330)||(44016640-44016713)
chr7 (275-323)||(11081755-11081803)
chr7 (268-330)||(25410260-25410322)
chr7 (275-327)||(6332462-6332514)
chr7 (259-330)||(15540976-15541048)
chr7 (199-330)||(21369772-21369904)
chr7 (256-328)||(2935508-2935581)
chr7 (256-328)||(22108306-22108379)
chr7 (256-328)||(22137317-22137390)
chr7 (268-323)||(25357182-25357237)
chr7 (264-330)||(25405522-25405589)
chr7 (256-328)||(40550066-40550139)
chr7 (256-328)||(40552344-40552417)
chr7 (265-330)||(3320037-3320103)
chr7 (265-330)||(3324785-3324851)
chr7 (154-330)||(6067067-6067250)
chr7 (261-328)||(40946568-40946636)
chr7 (256-330)||(44512504-44512577)
chr7 (262-328)||(7471962-7472029)
chr7 (275-328)||(9681060-9681112)
chr7 (262-328)||(18345781-18345848)
chr7 (262-328)||(38394226-38394293)
chr7 (262-328)||(40836725-40836792)
chr7 (136-184)||(43253357-43253406)
chr7 (262-328)||(48457893-48457960)
chr7 (272-328)||(1049290-1049345)
chr7 (272-328)||(3035964-3036019)
chr7 (264-323)||(8378489-8378549)
chr7 (262-323)||(11759372-11759434)
chr7 (272-328)||(13099468-13099523)
chr7 (137-188)||(13290341-13290393)
chr7 (262-323)||(20299705-20299767)
chr7 (272-328)||(20626278-20626333)
chr7 (272-328)||(20630169-20630224)
chr7 (272-328)||(20642588-20642643)
chr7 (253-328)||(27306204-27306279)
chr7 (278-330)||(28617267-28617318)
chr7 (272-324)||(42330991-42331042)
chr7 (272-328)||(44724819-44724874)
[»] chr2 (37 HSPs)
chr2 (136-330)||(27517490-27517691)
chr2 (265-330)||(34575123-34575188)
chr2 (158-330)||(30479124-30479301)
chr2 (264-330)||(17943665-17943731)
chr2 (256-330)||(20054743-20054817)
chr2 (256-330)||(20049999-20050074)
chr2 (264-330)||(12781207-12781273)
chr2 (257-330)||(38191142-38191215)
chr2 (199-323)||(28458749-28458873)
chr2 (264-330)||(2741070-2741137)
chr2 (137-288)||(37170607-37170763)
chr2 (272-330)||(22163016-22163073)
chr2 (273-330)||(10942505-10942562)
chr2 (273-330)||(10948374-10948431)
chr2 (272-328)||(19007846-19007901)
chr2 (264-330)||(2736334-2736401)
chr2 (264-330)||(17462565-17462632)
chr2 (256-328)||(36561117-36561190)
chr2 (264-330)||(39687112-39687179)
chr2 (264-330)||(45679852-45679919)
chr2 (137-184)||(13828177-13828226)
chr2 (265-323)||(31732763-31732820)
chr2 (265-330)||(39680174-39680240)
chr2 (261-328)||(42064720-42064789)
chr2 (262-328)||(13910027-13910094)
chr2 (262-328)||(19501993-19502060)
chr2 (262-328)||(23452219-23452286)
chr2 (262-328)||(27105003-27105070)
chr2 (272-328)||(3022378-3022433)
chr2 (272-328)||(5375340-5375395)
chr2 (272-328)||(6264142-6264197)
chr2 (275-323)||(8173541-8173589)
chr2 (137-184)||(19504178-19504226)
chr2 (272-328)||(22407448-22407503)
chr2 (275-319)||(40699590-40699634)
chr2 (137-184)||(42453842-42453890)
chr2 (272-328)||(43623574-43623629)
[»] chr6 (35 HSPs)
chr6 (137-323)||(22351704-22351897)
chr6 (256-330)||(25941799-25941873)
chr6 (139-330)||(24501303-24501501)
chr6 (173-329)||(17065983-17066141)
chr6 (137-330)||(22342652-22342853)
chr6 (256-330)||(3577468-3577541)
chr6 (257-330)||(13467446-13467518)
chr6 (275-323)||(17012310-17012358)
chr6 (264-330)||(17694838-17694904)
chr6 (260-330)||(25465881-25465951)
chr6 (258-330)||(12166126-12166198)
chr6 (264-330)||(13878856-13878923)
chr6 (264-330)||(16786048-16786115)
chr6 (262-328)||(20915339-20915405)
chr6 (256-328)||(29754685-29754758)
chr6 (265-330)||(13883604-13883670)
chr6 (275-329)||(15346611-15346664)
chr6 (275-329)||(19696705-19696759)
chr6 (137-188)||(25078416-25078469)
chr6 (268-330)||(30443551-30443613)
chr6 (265-330)||(35201313-35201379)
chr6 (262-328)||(1230231-1230298)
chr6 (262-328)||(4816213-4816280)
chr6 (262-328)||(14458749-14458816)
chr6 (262-328)||(14507158-14507225)
chr6 (275-328)||(22857949-22858002)
chr6 (265-330)||(33215957-33216022)
chr6 (136-184)||(33311550-33311599)
chr6 (275-323)||(11262729-11262777)
chr6 (272-328)||(11983023-11983078)
chr6 (257-293)||(26643341-26643377)
chr6 (257-293)||(26749307-26749343)
chr6 (137-184)||(28241163-28241211)
chr6 (137-184)||(30967625-30967673)
chr6 (137-184)||(33309281-33309329)
[»] scaffold0209 (1 HSPs)
scaffold0209 (264-330)||(16972-17038)
[»] scaffold0256 (1 HSPs)
scaffold0256 (258-330)||(16455-16528)
[»] scaffold0005 (2 HSPs)
scaffold0005 (262-323)||(50258-50318)
scaffold0005 (262-323)||(52257-52317)
[»] scaffold1050 (1 HSPs)
scaffold1050 (264-330)||(3055-3122)
[»] scaffold0140 (2 HSPs)
scaffold0140 (256-328)||(22354-22427)
scaffold0140 (256-328)||(24629-24702)
[»] scaffold0131 (2 HSPs)
scaffold0131 (265-328)||(14369-14431)
scaffold0131 (137-184)||(14231-14279)
[»] scaffold0025 (2 HSPs)
scaffold0025 (262-330)||(69274-69343)
scaffold0025 (135-184)||(69131-69182)
[»] scaffold0370 (1 HSPs)
scaffold0370 (262-328)||(1435-1502)
[»] scaffold0068 (1 HSPs)
scaffold0068 (262-328)||(29409-29476)
[»] scaffold0008 (1 HSPs)
scaffold0008 (281-330)||(57430-57479)
[»] scaffold0468 (1 HSPs)
scaffold0468 (137-184)||(1493-1541)
[»] scaffold0038 (1 HSPs)
scaffold0038 (137-184)||(41325-41373)
[»] scaffold0004 (1 HSPs)
scaffold0004 (272-328)||(80098-80153)


Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 26 - 234
Target Start/End: Complemental strand, 46783614 - 46783406
Alignment:
Q  26 atcaccctgctccctagccaacgtctaaagatagctattaactctttttcattcattacatgtaacctcaatgaactacatgtgagggtttcaattgaag 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  46783614 atcaccctgctccctagccaacgtctaaagatagctattaactctttttcattcattacatgtaacctcaatgaactacatgcgagagtttcaattgaag 46783515  T
Q  126 gaatgatttactgttgtgaattcgttgcaaatcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataa 225  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46783514 gaatgatttactgttgtaaattcgttgcaaatcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataa 46783415  T
Q  226 ttcaagcaa 234  Q
    |||||||||    
T  46783414 ttcaagcaa 46783406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 198 - 330
Target Start/End: Complemental strand, 46783408 - 46783276
Alignment:
Q  198 caatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagaggagagaagaagaagaacacaagaatttgtttacctagttcgatcc 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  46783408 caatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagaggagagaagaagaagaacacaataatttgtttatccagttcgatcc 46783309  T
Q  298 aatattgacctattctgggggagagaacagctc 330  Q
    ||||||||| || ||||| ||||| ||||||||    
T  46783308 aatattgacttactctggaggagataacagctc 46783276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 318
Target Start/End: Original strand, 3090960 - 3091145
Alignment:
Q  137 tgttgtgaattcgttgcaaat-cacaccaataaaa-tttgatgtgtggagtaaataaa-ccaaacaatcaaattaagtgggtgaaaatataattcaagca 233  Q
    ||||||||||||||||||||  ||||||||||||| ||| |||||||||| ||||||| ||||  |||||||| ||| || ||| |||||||||||| ||    
T  3090960 tgttgtgaattcgttgcaaaaacacaccaataaaaatttcatgtgtggagcaaataaaaccaagaaatcaaatcaagcggatgacaatataattcaaaca 3091059  T
Q  234 aaaataaacagcacgaga-ggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctggggg 318  Q
    |||||||| | || ||||   || ||||||||||||||||||||| |||||| | |||||| || |||  ||||||| ||||||||    
T  3091060 aaaataaatatcaagagataaagggaagaagaagaacacaagaatctgtttatccagttcggtctaatgatgacctactctggggg 3091145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 329
Target Start/End: Complemental strand, 14997366 - 14997173
Alignment:
Q  139 ttgtgaattcgttgcaaa--tcacaccaataaaatttgatgtgtggagtaaataaa-ccaaacaatcaaattaagtgggtgaaaatataattcaagcaaa 235  Q
    |||||||||| |||||||  ||||||| ||||| || || |||||||| ||||||| |||| ||| ||||| |||  ||||| |||||||||||||||||    
T  14997366 ttgtgaattcattgcaaaaatcacaccgataaactt-gacgtgtggagcaaataaaaccaagcaagcaaatcaagcaggtgacaatataattcaagcaaa 14997268  T
Q  236 aataaacagcacgagaggagagaagaagaagaacac-aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagct 329  Q
    |||||||||||  |||  |  ||||||  ||||||| || ||||||||||||||||||| || |||  | ||||||||||||||||||| |||||    
T  14997267 aataaacagcaatagataaaggaagaaagagaacacaaataatttgtttacctagttcggtctaatgataacctattctgggggagagagcagct 14997173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 309
Target Start/End: Original strand, 20566511 - 20566690
Alignment:
Q  136 ctgttgtgaattcgttgcaaatcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaa-attaagtgggtga-aaatata-attcaagc 232  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||| |||||| ||| || |||||| ||| || |||| | ||||||    
T  20566511 ctgttgtgaattcgttaaaaatcacaccaataaaatttgatgtgtggaacaaataaacaaaacaaccaatatcaagtggttgacaattatagaatcaagc 20566610  T
Q  233 aaaaataaacagcacgagaggag---agaagaagaagaacaca--agaatttgtttacctagttcgatccaatattgaccta 309  Q
    ||||||||| | || | ||||||   |||||||||||||||||  ||| |||||||||| |||| ||||||||| |||||||    
T  20566611 aaaaataaa-aacaagggaggagagaagaagaagaagaacacaagagagtttgtttacc-agtttgatccaatactgaccta 20566690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 222 - 330
Target Start/End: Original strand, 4144627 - 4144735
Alignment:
Q  222 ataattcaagcaaaaataaacagcacgagaggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggaga 321  Q
    ||||||||| ||||| ||||||||| ||||  |  ||||||| |||||||||||||||||||||| |||||| || |||  ||||||| |||||||||||    
T  4144627 ataattcaaacaaaagtaaacagcaagagataaaggaagaaggagaacacaagaatttgtttacccagttcggtctaatgatgacctactctgggggaga 4144726  T
Q  322 gaacagctc 330  Q
    || ||||||    
T  4144727 gagcagctc 4144735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 9314499 - 9314602
Alignment:
Q  137 tgttgtgaattcgttgcaaa--tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaa 234  Q
    ||||||| |||| |||||||  |||||||||||||| ||||||||||||| |||||||| ||  |||||||| |||||| ||| |||  |||||||||||    
T  9314499 tgttgtggattcattgcaaaagtcacaccaataaaacttgatgtgtggagcaaataaacaaagtaatcaaatcaagtggatgacaatgaaattcaagcaa 9314598  T
Q  235 aaat 238  Q
    ||||    
T  9314599 aaat 9314602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 2401199 - 2401266
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| |||||||||||||    
T  2401199 agaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 2401266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 330
Target Start/End: Complemental strand, 25134399 - 25134201
Alignment:
Q  137 tgttgtgaattcgttgc--aaatcacaccaataaaa-tttgatgtgtggagtaaataaac--caaacaatcaaattaagtgggtgaaaatataattcaag 231  Q
    ||||||||||||||||   ||| ||||||||||||| ||||||| ||| ||||||| ||   |||| |||||||| ||| ||||   || |||||||||     
T  25134399 tgttgtgaattcgttgtgaaaaccacaccaataaaaatttgatgcgtgaagtaaattaatatcaaataatcaaatcaagcgggtagtaa-ataattcaaa 25134301  T
Q  232 caaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||| ||||||||  |||  | || |||||| |||||||||||||||||||||| | |||| || |||  ||| ||| | ||||||||||||||||||    
T  25134300 caaaaacaaacagcaaaagataaaaggaagaaggagaacacaagaatttgtttacccacttcggtctaatgatgatctagtatgggggagagaacagctc 25134201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 2393261 - 2393334
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||||||||| | |||||| || |||  ||||||| ||| ||||||||| ||||||    
T  2393261 agaagaagaagaacacaagaatttgtttatccagttcggtctaatgatgacctagtct-ggggagagagcagctc 2393334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 21353334 - 21353400
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || ||   ||||||| ||||||||||||| ||||||    
T  21353334 aagaacacaagaatttgtttacccagttcggtctaaagatgacctagtctgggggagagagcagctc 21353400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 28279697 - 28279624
Alignment:
Q  135 actgttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtggagtaaataaaccaaacaatcaaat 206  Q
    |||||||||||||||||  ||||||||||||||||||  ||||||||||||| || | || ||||||| |||||    
T  28279697 actgttgtgaattcgttaaaaatcacaccaataaaatacttgatgtgtggagcaagttaaacaaacaaccaaat 28279624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 15916674 - 15916621
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  15916674 aatttgtttacccagttcggtccaaaattgacctagtctgggggagagagcagc 15916621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 51757827 - 51757760
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  51757827 agaagaacacaaaagaatttgttgacctagttcggtccaa-attgacctagtctgggggagagagcagc 51757760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 27339127 - 27339182
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  27339127 aagaatttgttgacctagttcggtccaa-attgacctagtctgggggagagatcagc 27339182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 2232787 - 2232720
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  2232787 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 2232720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 9526663 - 9526596
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  9526663 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 9526596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 17324356 - 17324294
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||| ||  ||||||||| ||||    
T  17324356 agaacacaagaatttgttgacctagttcggtccaa-attgacctagtcatggggagagaccagc 17324294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 23786142 - 23786069
Alignment:
Q  256 agaagaagaagaacacaag--aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||||||||||  |||||||| ||| |||||| ||||||  ||||||| ||||||||||||| ||||    
T  23786142 agaagaagaagaacacaaggaaatttgttgacccagttcggtccaat-ctgacctagtctgggggagagagcagc 23786069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 13426797 - 13426831
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaat 171  Q
    |||||||||||||||| ||||||||||||||||||    
T  13426797 tgttgtgaattcgttgaaaatcacaccaataaaat 13426831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 28998249 - 28998302
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaaca 326  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||||||    
T  28998249 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagaaca 28998302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 29003965 - 29004018
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaaca 326  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||||||    
T  29003965 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagaaca 29004018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 39462804 - 39462747
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||||    
T  39462804 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagctc 39462747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 2510309 - 2510376
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  2510309 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 2510376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 6115101 - 6115153
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  6115101 aatttgtttacccagttcggtccaa-attgacctagtctgggggagagagcagc 6115153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 9526796 - 9526741
Alignment:
Q  137 tgttgtgaattcgttgc---aaatcacaccaataaaatttgatgtgtggagtaaat 189  Q
    ||||||||||||||||    ||||||||||||||||| ||||||||||||| ||||    
T  9526796 tgttgtgaattcgttgagaaaaatcacaccaataaaacttgatgtgtggagcaaat 9526741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 10399812 - 10399879
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  10399812 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 10399879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 13358870 - 13358803
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  13358870 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 13358803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 14183589 - 14183642
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||| |||||| ||||| | ||||||| ||||||||||||| ||||    
T  14183589 aatttgtttacccagttcggtccaaaactgacctagtctgggggagagagcagc 14183642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 15294818 - 15294885
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  15294818 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 15294885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 26613092 - 26613176
Alignment:
Q  135 actgttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtga 217  Q
    |||||||||||||||||  ||||||||||||| ||||  |||| |||||||| |||  || ||| ||| |||||||||| |||||    
T  26613092 actgttgtgaattcgttaaaaatcacaccaatgaaatacttgacgtgtggagcaaaataatcaagcaaccaaattaagtaggtga 26613176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 27916780 - 27916727
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||| | |||| ||||||| ||||||| ||||||||||||| ||||    
T  27916780 aatttgtttacccaattcggtccaatactgacctagtctgggggagagagcagc 27916727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 28840976 - 28840909
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  28840976 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 28840909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 31735505 - 31735572
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  31735505 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 31735572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 51750336 - 51750269
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  51750336 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 51750269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 51752660 - 51752593
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  51752660 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 51752593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 6823299 - 6823244
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  6823299 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 6823244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 6995696 - 6995751
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||||| ||||||||| ||||| ||||||| ||||    
T  6995696 aagaatttgttgacctagttcggtccaa-attgacctagtctggaggagagagcagc 6995751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 11693170 - 11693238
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaat-ttgatgtgtggagtaaataaaccaaacaatcaa 204  Q
    |||||||||||||||  ||||||||||||||||||  | ||||| ||||||||| || ||| |||||||    
T  11693170 tgttgtgaattcgttaaaaatcacaccaataaaatagttatgtgcggagtaaattaatcaagcaatcaa 11693238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 12302501 - 12302556
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  12302501 aagaatttgttgacccagttcggtccaa-attgacctaatctgggggagagagcagc 12302556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 17186123 - 17186178
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||| | |||| ||||| ||||||||| ||||||||||||| ||||    
T  17186123 aagaatttgtttacccaattcggtccaa-attgacctagtctgggggagagagcagc 17186178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 17324632 - 17324687
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  17324632 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 17324687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 20302755 - 20302693
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| |||||||||||||    
T  20302755 agaagaacacaaaagaatttgttgaccaagttcggtccaa-attgacctagtctgggggagaga 20302693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 26613237 - 26613285
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||| |||||| || |||| ||||||| |||||||||||||    
T  26613237 aatttgtttacccagttcggtcaaatactgacctaatctgggggagaga 26613285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 27336936 - 27336991
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  27336936 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 27336991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 28207064 - 28207119
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  28207064 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 28207119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 28842791 - 28842729
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||  ||||||||| |||||||||  ||||| ||||||||| |||||||||||||    
T  28842791 agaagaacacaatagaatttgttgacctagttctgtccaa-attgacctagtctgggggagaga 28842729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 32261439 - 32261399
Alignment:
Q  253 gagagaagaagaagaacacaagaatttgtttacctagttcg 293  Q
    |||||||||||||||||| || ||||| |||||||||||||    
T  32261439 gagagaagaagaagaacataaaaatttatttacctagttcg 32261399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 40134230 - 40134175
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||| || ||||| ||||||||| | ||||||||||| ||||    
T  40134230 aagaatttgtttacctagtccggtccaa-attgacctagtttgggggagagagcagc 40134175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 50078816 - 50078871
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||| | |||| ||||| ||||||||| ||||||||||||| ||||    
T  50078816 aagaatttgtttaccaaattcggtccaa-attgacctagtctgggggagagagcagc 50078871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 50307542 - 50307597
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  50307542 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 50307597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 154 - 330
Target Start/End: Original strand, 26406341 - 26406518
Alignment:
Q  154 aaatcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagagg 253  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||      
T  26406341 aaatcacaccaataaaatttgatgtgtggagcaaataaaccaagcaatcaaatcaagtgggtgacaatataattcaagcaaaaataaacagcaagagata 26406440  T
Q  254 agagaagaagaagaacac-aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |  ||||||| ||||||| |||||||||||||||||||||| || ||| || ||||| ||||| ||||||| ||||||    
T  26406441 aaggaagaaggagaacacaaagaatttgtttacctagttcggtctaatgttaacctactctggaggagagagcagctc 26406518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 137 - 323
Target Start/End: Original strand, 31782311 - 31782500
Alignment:
Q  137 tgttgtgaattcgttgcaaa--tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaa 234  Q
    ||||||||||| ||||||||  ||| |||||||||| ||||||||||||| | |||||||||  |||||||| ||| |||||| |||||||||||| |||    
T  31782311 tgttgtgaatttgttgcaaaaatcataccaataaaacttgatgtgtggagcatataaaccaagaaatcaaatcaagcgggtgacaatataattcaaacaa 31782410  T
Q  235 aaat-aaacagcacgagaggaga-gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||| ||||||||  |||  | | | ||||| ||||||||||||| |||||||| |||||| || |||  ||| ||| |||||||||||||    
T  31782411 aaataaaacagcaacagataaaaggcagaaggagaacacaagaatctgtttacc-agttcggtctaatgatgatctactctgggggagaga 31782500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 330
Target Start/End: Complemental strand, 10627672 - 10627496
Alignment:
Q  158 cacaccaataa--aatttgatgtgtggagtaaat--aaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagagg 253  Q
    |||||||||||  || |||||| |||||| ||||  ||||||| ||||||||| ||| |||||| ||| |||||||| |||||||||||| || ||||      
T  10627672 cacaccaataataaacttgatgcgtggagcaaattaaaaccaagcaatcaaatcaagcgggtgacaatttaattcaaacaaaaataaacaacaagagata 10627573  T
Q  254 agagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |  ||||||| ||||||||||||| |||||||| |||||  || |||  ||||||| ||| ||||||||| ||||||    
T  10627572 aaggaagaaggagaacacaagaatctgtttacccagttcagtctaatgatgacctactctaggggagagagcagctc 10627496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 330
Target Start/End: Complemental strand, 22673163 - 22672964
Alignment:
Q  137 tgttgtgaattcgtt--gcaaatcacaccaataaaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaagc 232  Q
    |||||||||||||||  | ||| ||||||||||||| |||||| |||||| |||| ||  ||||  |||||||| ||| ||||   || ||||||||| |    
T  22673163 tgttgtgaattcgttaagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataattcaaac 22673065  T
Q  233 aaaaataaacagcacgagaggagag-aaga-agaa-gaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagct 329  Q
    |||||||||||||| ||||  | || |||| |||| ||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| |||||    
T  22673064 aaaaataaacagcaagagataaaaggaagagagaaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagct 22672965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 330
Target Start/End: Complemental strand, 42238499 - 42238390
Alignment:
Q  222 ataattcaagcaaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggag 320  Q
    ||||| ||| ||||||||||||||| ||||  | || |||||| |||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||    
T  42238499 ataatccaaacaaaaataaacagcaagagataaaaggaagaaggagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggag 42238400  T
Q  321 agaacagctc 330  Q
    ||| ||||||    
T  42238399 agagcagctc 42238390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 25452691 - 25452625
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||||||||||||||||| ||||||    
T  25452691 aagaacacaagaatttgtttacccagttcggtctaatgatgacctattctgggggagagagcagctc 25452625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 330
Target Start/End: Original strand, 17841192 - 17841301
Alignment:
Q  222 ataattcaagcaaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggag 320  Q
    ||||||||| |||||||||| |||| ||||  | || |||||| ||||||||| |||||||||||| |||||| || |||  ||||||| ||||||||||    
T  17841192 ataattcaaacaaaaataaatagcaagagataaaaggaagaaggagaacacaataatttgtttacccagttcggtctaatgatgacctagtctgggggag 17841291  T
Q  321 agaacagctc 330  Q
    ||| ||||||    
T  17841292 agagcagctc 17841301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 25445692 - 25445626
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  25445692 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 25445626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 28786604 - 28786541
Alignment:
Q  260 gaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||| |||||||||||||||||||||| |||||| || |||  ||||||| |||||||||||||    
T  28786604 gaaggagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 28786541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 37705767 - 37705825
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaa 324  Q
    ||||| |||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||    
T  37705767 agaacgcaagaatttgttgacctagttcggtccaa-attgacctagtctgggggagagaa 37705825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 1240632 - 1240558
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||||||||||||||| ||||||||||||| |  |||  ||||||| | |||| |||||| ||||||    
T  1240632 agaagaagaagaacacaagaatttatttacctagttcggtttaatgatgacctagtttgggagagagagcagctc 1240558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 10750002 - 10749930
Alignment:
Q  256 agaagaagaagaacacaa-gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||||||||| ||||||||| ||| |||||| |||||| | |||||| ||||||||||||| ||||    
T  10750002 agaagaagaagaacacaaagaatttgttgacccagttcggtccaatct-gacctagtctgggggagagagcagc 10749930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 1171007 - 1170940
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  1171007 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 1170940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 2297986 - 2298053
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| |||||||||||||||||| || |||  ||||||| |||||||| |||| ||||||    
T  2297986 aagaacacaagatatttgtttacctagttcggtctaatgatgacctagtctgggggggagagcagctc 2298053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 15354551 - 15354624
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| ||||||  ||||||| ||||||||||||| ||||    
T  15354551 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaat-ctgacctagtctgggggagagagcagc 15354624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 18466974 - 18466912
Alignment:
Q  267 aacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||| ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||||    
T  18466974 aacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagctc 18466912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 25921455 - 25921524
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||||    
T  25921455 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagctc 25921524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 27910747 - 27910678
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||||    
T  27910747 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctaatctgggggagagagcagctc 27910678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 34033539 - 34033597
Alignment:
Q  253 gagagaagaagaagaacacaag--aatttgtttacctagttcgatccaatattgaccta 309  Q
    |||||||||  |||||||||||  |||||||||||| |||||||||||||| |||||||    
T  34033539 gagagaagagaaagaacacaagcaaatttgtttacccagttcgatccaatactgaccta 34033597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 35385437 - 35385504
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  35385437 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 35385504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 36402322 - 36402372
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||| ||||||||||||| || ||||||||| |||||||||||||    
T  36402322 aagaatttgttgacctagttcgatctaa-attgacctagtctgggggagaga 36402372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 658201 - 658253
Alignment:
Q  134 tactgttgtgaattcgttgcaaatcacaccaata--aaatttgatgtgtggag 184  Q
    |||||||| ||||||| || ||||||||||||||  |||||||||||||||||    
T  658201 tactgttgcgaattcgatgaaaatcacaccaataacaaatttgatgtgtggag 658253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 2175215 - 2175148
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  2175215 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 2175148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 4237065 - 4237020
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtg 181  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||    
T  4237065 tgttgtgaattcgttgaaaatcacaccaataacaacttgatgtgtg 4237020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 10757478 - 10757406
Alignment:
Q  256 agaagaagaagaacacaa-gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||||||||| ||||||||| ||| |||||| || ||| | |||||| ||||||||||||| ||||    
T  10757478 agaagaagaagaacacaaagaatttgttgacccagttcggtctaatct-gacctagtctgggggagagagcagc 10757406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 11962412 - 11962485
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| |||||||||||||||||||||| |||||| || |||  ||||||| | || || ||||| ||||||    
T  11962412 gaagaaggagaacacaagaatttgtttacccagttcggtctaatgatgacctagtatgaggaagagagcagctc 11962485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 21684434 - 21684501
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  21684434 agaagaacacaaacgaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 21684501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 34477035 - 34477102
Alignment:
Q  262 agaagaacacaaga--atttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||  ||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  34477035 agaagaacacaagagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 34477102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 34479400 - 34479467
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  34479400 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 34479467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 39798344 - 39798277
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||||||||| |||||| || ||||||||||||| ||||    
T  39798344 agaagaacacaaaagaatttgttgacccagttcgatccaa-attgacttagtctgggggagagagcagc 39798277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 2724178 - 2724123
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  2724178 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 2724123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 4410458 - 4410410
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||| |||||||||| ||||||||||||||| || |||||||||||||    
T  4410458 tgttgcgaattcgttgaaaatcacaccaataacaacttgatgtgtggag 4410410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 10474317 - 10474372
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||||| ||||||||| | ||||||||||| ||||    
T  10474317 aagaatttgttgacctagttcggtccaa-attgacctagtatgggggagagagcagc 10474372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 10529093 - 10529148
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  10529093 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 10529148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 18511206 - 18511261
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||||| ||||||||| ||| ||||||||| ||||    
T  18511206 aagaatttgttgacctagttcggtccaa-attgacctagtctaggggagagagcagc 18511261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 24127141 - 24127086
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  24127141 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 24127086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 25904385 - 25904338
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||| |||||||||| ||||| ||||||||| |||||||||||||    
T  25904385 aatttgttgacctagttcggtccaa-attgacctagtctgggggagaga 25904338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 27912833 - 27912771
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| |||||||||||||    
T  27912833 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagaga 27912771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 34033422 - 34033474
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaatttgatgtgtggagtaaat 189  Q
    |||||||||||| ||  |||||||||||||||||  |||||||||||| ||||    
T  34033422 tgttgtgaattcattaaaaatcacaccaataaaacgtgatgtgtggagcaaat 34033474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 39854768 - 39854713
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||||| ||||| ||| ||||||||||||| ||||    
T  39854768 aagaatttgttgacctagttcggtccaa-attgatctagtctgggggagagagcagc 39854713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 137 - 286
Target Start/End: Original strand, 32273806 - 32273959
Alignment:
Q  137 tgttgtgaattcgttgcaaa--tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaa 234  Q
    ||||||||||||||||||||  |||||||||||||| ||||||| ||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  32273806 tgttgtgaattcgttgcaaaaatcacaccaataaaacttgatgtctggagcaaataaaccaaacaatcaaatcaagtggttgacaatataattcaagcaa 32273905  T
Q  235 aaataaacagcacgagaggagagaagaagaagaacaca--agaatttgtttacc 286  Q
    |||||||||||| ||||| |||||||||||||||||||  ||||||||||||||    
T  32273906 aaataaacagcaagagagaagagaagaagaagaacacaagagaatttgtttacc 32273959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 137 - 330
Target Start/End: Original strand, 25613810 - 25614008
Alignment:
Q  137 tgttgtgaattcgttgcaaat-cacaccaataaaat--ttgatgtgtggagtaaat--aaaccaaacaatcaaattaagtgggtgaaaatataattcaag 231  Q
    |||| |||||||||||||||  |||||||||||||   ||||||||| ||| ||||  ||||||||||||||||| |||  |||||||| |||||||||     
T  25613810 tgttatgaattcgttgcaaaaacacaccaataaaaaacttgatgtgttgagcaaattaaaaccaaacaatcaaatcaagcaggtgaaaaaataattcaaa 25613909  T
Q  232 caaaaataaacagcacgagaggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||| |||| ||||  |  || |||| ||||||||||||||||||||||||||||| || |||  ||||||| ||||||||||||| ||||||    
T  25613910 caaaaataaatagcaagagataatggaggaaggagaacacaagaatttgtttacctagttcggtctaatgatgacctactctgggggagagagcagctc 25614008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 317
Target Start/End: Original strand, 4874336 - 4874518
Alignment:
Q  137 tgttgtgaattcgttgcaaa--tcacaccaataaaatttgatgtgtggagtaaat-aaaccaaacaatcaaattaagtgggtgaaaatataattcaagca 233  Q
    ||||||||||||||||||||  ||||||||| |||| ||||| ||||||| | || ||||||| ||||||||| | |||| ||| ||||||||||||       
T  4874336 tgttgtgaattcgttgcaaaaatcacaccaacaaaacttgatatgtggagcatattaaaccaagcaatcaaatcacgtggatgacaatataattcaat-- 4874433  T
Q  234 aaaataaacagcacgagaggagag-aagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggg 317  Q
      |||||| |||| |||||||||| ||||||  ||| ||||  ||||||||||||| |||||  | ||||||||||||| |||||||    
T  4874434 --aataaatagcaagagaggagaggaagaaggggaatacaaaagaatttgtttacccagttcagttcaatattgacctactctgggg 4874518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 330
Target Start/End: Original strand, 5336656 - 5336832
Alignment:
Q  157 tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaaaaata-aacagcacgagaggag 255  Q
    ||||| |||||||| |||| |||| ||| ||||||| ||| ||||||||| |||||| |||  |||||||||||||||||||  ||||| | ||||  |     
T  5336656 tcacatcaataaaacttgaagtgtagagcaaataaatcaagcaatcaaatcaagtggatgaccatataattcaagcaaaaatttaacagtaagagataaa 5336755  T
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
     ||||||| |||||||||  |||||||||||   |||||  ||||||||||||||| | | ||||||||| ||||||    
T  5336756 ggaagaaggagaacacaaaagaatttgtttaatcagttcagtccaatattgacctactataggggagagagcagctc 5336832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 330
Target Start/End: Original strand, 4555938 - 4556112
Alignment:
Q  158 cacaccaataaaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagaggag 255  Q
    |||||||||||||||||||| |||||| |||| ||  ||||| |||||||| ||| ||||   ||| |||| ||| ||||| ||||||||| ||||  |     
T  4555938 cacaccaataaaatttgatgcgtggagcaaattaataccaaataatcaaatcaagcgggtagcaat-taatccaaacaaaagtaaacagcaagagataaa 4556036  T
Q  256 ag-aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    || |||||  |||||||||||||||||||||| |||||| |  |||  ||||||| ||||||||||||| ||||||    
T  4556037 aggaagaaagagaacacaagaatttgtttacccagttcggtttaatgatgacctagtctgggggagagagcagctc 4556112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 8529463 - 8529397
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  8529463 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 8529397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 18587162 - 18587096
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  18587162 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 18587096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 4885069 - 4885004
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  4885069 agaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 4885004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 14789412 - 14789472
Alignment:
Q  262 agaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||||||||||| ||| |||||| ||||| ||||||||| |||||||||||||    
T  14789412 agaagaacacaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagaga 14789472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 36769682 - 36769609
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| |||||||||||||||||||| | |||||| || |||  ||||||| ||||||||||||| ||||||    
T  36769682 gaagaaggagaacacaagaatttgtttatccagttcggtctaatgatgacctagtctgggggagagagcagctc 36769609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 36771599 - 36771526
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| ||||||||||||||||||||||||||||| || |||  ||||||| ||||| | ||||| ||||||    
T  36771599 gaagaaggagaacacaagaatttgtttacctagttcggtctaatgatgacctagtctggcgtagagagcagctc 36771526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 330
Target Start/End: Complemental strand, 4570420 - 4570224
Alignment:
Q  137 tgttgtgaattcgtt--gcaaatcacaccaataaaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaagc 232  Q
    |||||||||||||||  | ||| ||||||||||||| |||||| |||||| |||| ||  ||||  |||||||| ||| ||||   || ||||||||| |    
T  4570420 tgttgtgaattcgttttgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataattcaaac 4570322  T
Q  233 aaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    || | |||||| || ||||  | || ||||||||||||||||||||||||||||  |||||| || |||  ||||| | ||||||||||||| ||||||    
T  4570321 aatagtaaacaacaagagataaaaggaagaagaagaacacaagaatttgtttacacagttcggtctaatgatgacc-agtctgggggagagagcagctc 4570224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 10114654 - 10114599
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||||| |||| ||||||| ||||||| ||||||||||||| ||||||    
T  10114654 aatttgtttacctaattcggtccaatactgacctagtctgggggagagagcagctc 10114599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 26557922 - 26557867
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||| ||||||| |||| || ||||||||||||| ||||||    
T  26557922 aatttgtttacctagttcggtccaatactgacttagtctgggggagagagcagctc 26557867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 15312512 - 15312446
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||  ||||||||||||||||||||| || |||  ||||||| ||||||||||||| ||||||    
T  15312512 aagaacatgagaatttgtttacctagttcggtctaatgatgacctagtctgggggagagaccagctc 15312446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 323
Target Start/End: Complemental strand, 16455588 - 16455531
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||||| |||||||||||||    
T  16455588 agaacacaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagaga 16455531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 322
Target Start/End: Complemental strand, 16639159 - 16638965
Alignment:
Q  132 tttactgttgtgaattcgttgcaaat-cacaccaataaaat-ttgatgtgtggagtaaataaa-ccaaacaatcaaattaagtgggtgaaaatataattc 228  Q
    |||| |||||||||||| |||||||  || ||||||||||  ||||||||||||| ||||||| |||| ||||||||| ||| ||  |  |||||||| |    
T  16639159 tttattgttgtgaattctttgcaaaaacataccaataaaaacttgatgtgtggagcaaataaaaccaagcaatcaaatcaagcggaaggcaatataatcc 16639060  T
Q  229 aagcaaaaa-taaacagcacgagaggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagag 322  Q
    ||||||||| ||||||||| ||||  |  ||| ||| | | |||||| ||||||||||| |||||  || |||  ||||||| |||||| |||||    
T  16639059 aagcaaaaaataaacagcaagagataaaggaataaggatatcacaaggatttgtttacccagttcagtctaattatgacctactctgggagagag 16638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 11006219 - 11006286
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  11006219 agaagaacacaaaagaatttgttaacctagttcggtccaa-attgacctagtctgggggagagagcagc 11006286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 11008550 - 11008617
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  11008550 agaagaacacaaaagaatttgttgacctagttcggtccaa-attgacctagtctgggggagagagcagc 11008617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 14787413 - 14787473
Alignment:
Q  262 agaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||||||||||| ||| |||| | ||||| ||||||||| |||||||||||||    
T  14787413 agaagaacacaagaatttgttgacccagtttggtccaa-attgacctagtctgggggagaga 14787473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 36380713 - 36380634
Alignment:
Q  251 aggagagaagaaga-agaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||| ||||||| |||||||||  ||||||||||||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  36380713 aggagaaaagaagagagaacacaaaagaatttgtttacccagttcgctccaa-attgacctagtctgggggagagagcagc 36380634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 2484712 - 2484763
Alignment:
Q  134 tactgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    |||||||||||||||| || ||||||||||||||| || |||||||||||||    
T  2484712 tactgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 2484763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 17662089 - 17662140
Alignment:
Q  134 tactgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    |||||||| |||||||||| ||||||||||||||| || |||||||||||||    
T  17662089 tactgttgcgaattcgttgaaaatcacaccaataacaacttgatgtgtggag 17662140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 323
Target Start/End: Complemental strand, 4558549 - 4558448
Alignment:
Q  222 ataattcaagcaaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggag 320  Q
    ||||||||| ||||||| ||||||| ||||  | || || |||||||||||| ||||||||||||| |||||| || |||  ||||| | ||||||||||    
T  4558549 ataattcaaacaaaaattaacagcaagagataaaaggaaaaagaagaacacatgaatttgtttacccagttcggtctaatgatgacc-agtctgggggag 4558451  T
Q  321 aga 323  Q
    |||    
T  4558450 aga 4558448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 5664722 - 5664673
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||||||  |||||||||||||    
T  5664722 tgttgtgaattcgatgaaaatcacaccaataaaatacttgatgtgtggag 5664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 15317153 - 15317088
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||| ||||||||| ||||||    
T  15317153 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtct-ggggagagagcagctc 15317088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 19323177 - 19323128
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||||||  |||||||||||||    
T  19323177 tgttgtgaattcgatgaaaatcacaccaataaaatacttgatgtgtggag 19323128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 5516090 - 5516142
Alignment:
Q  139 ttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtggagtaaat 189  Q
    |||||||| ||||  ||||||||||||||||||  ||||||||||||||||||    
T  5516090 ttgtgaatccgttaaaaatcacaccaataaaatacttgatgtgtggagtaaat 5516142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 5635458 - 5635525
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  5635458 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 5635525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 6765195 - 6765128
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  6765195 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 6765128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 8631401 - 8631468
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  8631401 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 8631468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 12102425 - 12102372
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||| ||||| | ||||||| | ||||||||||| ||||    
T  12102425 aatttgtttacctagttcggtccaaaactgacctagtatgggggagagagcagc 12102372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 13547490 - 13547438
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||| || |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  13547490 aatttattgacctagttcgatccaa-attgacctagtctgggggagagagcagc 13547438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 16185831 - 16185884
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||| |||||| ||||| | ||||||| ||||||||||||| ||||    
T  16185831 aatttgtttacccagttcggtccaaaactgacctagtctgggggagagagcagc 16185884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 16688927 - 16688992
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||||||||||||| |||||| || |||  ||||||| | || |||||||| ||||||    
T  16688927 agaacacaagaatttgtttacccagttcggtctaatgatgacctagtttgtgggagagagcagctc 16688992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 329
Target Start/End: Complemental strand, 25357986 - 25357925
Alignment:
Q  268 acacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagct 329  Q
    |||||| |||||||||||| |||| | ||||||| ||||||| ||| ||||||||| |||||    
T  25357986 acacaaaaatttgtttacccagttaggtccaatactgacctagtctaggggagagagcagct 25357925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 36378629 - 36378577
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  36378629 aatttgtttacccagttcggtccaa-attgacctagtctgggggagagagcagc 36378577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 36380834 - 36380782
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaa--atttgatgtgtggagtaa 187  Q
    |||||| |||||| || ||||||||||||||||  ||||||||||||||||||    
T  36380834 tgttgtcaattcgatgaaaatcacaccaataaaatatttgatgtgtggagtaa 36380782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 37089354 - 37089421
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  37089354 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 37089421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 4215645 - 4215590
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  4215645 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 4215590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 5143263 - 5143314
Alignment:
Q  278 ttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||| |||||||||| |||||||| |||||| ||||||||||||| ||||||    
T  5143263 ttgttgacctagttcggtccaatat-gacctaatctgggggagagagcagctc 5143314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 5198895 - 5198847
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  5198895 tgttgtgaattcgatgaaaatcacaccaataataacttgatgtgtggag 5198847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 7941662 - 7941607
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  7941662 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 7941607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 11853742 - 11853678
Alignment:
Q  267 aacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  11853742 aacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 11853678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 17662239 - 17662294
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  17662239 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 17662294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 22800856 - 22800911
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  22800856 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 22800911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 24889135 - 24889080
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  24889135 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 24889080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 28454020 - 28453972
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||| |||||| ||||||| | ||||| |||||||||||||    
T  28454020 aatttgtttacccagttcggtccaatactaacctagtctgggggagaga 28453972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 38928171 - 38928226
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  38928171 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 38928226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 40637413 - 40637358
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  40637413 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 40637358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 7e-46; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 28228842 - 28228656
Alignment:
Q  139 ttgtgaattcgttgcaaa--tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaaaa 236  Q
    |||||||||||||| |||  |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||||| ||||||||    
T  28228842 ttgtgaattcgttgtaaaaatcacaccaataaaacttgatgtgtggagaaaataaaccaaacaatcaaatcaagtggttgacaatataatttaagcaaaa 28228743  T
Q  237 at-aaacagcacgagaggagagaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggaga 321  Q
    || |||| | | | ||||||||||||||||||||||||  |||| ||||||||||||||| ||||||||||||||| | |||||||||    
T  28228742 attaaacggtaag-gaggagagaagaagaagaacacaaaagaatgtgtttacctagttcggtccaatattgacctactttgggggaga 28228656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 137 - 330
Target Start/End: Complemental strand, 30423541 - 30423345
Alignment:
Q  137 tgttgtgaattcgttgcaaa--tcacaccaataaaatttgatgtgtggagtaaataaa-ccaaacaatcaaattaagtgggtgaaaatataattcaagca 233  Q
    |||||||||||| |||||||  |||||||||||||| ||||||||||||| ||||||| |||| ||||||||| ||| |||||| |||||||||||| ||    
T  30423541 tgttgtgaattcattgcaaaaatcacaccaataaaacttgatgtgtggagcaaataaaaccaagcaatcaaatcaagcgggtgacaatataattcaaaca 30423442  T
Q  234 aaaataaacagcacgagaggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||| ||||  |  ||||||| ||||||||||||||||||||||  ||||| || |||  ||||||| ||||| ||||||| ||||||    
T  30423441 aaaataaacagcaagagataaaggaagaaggagaacacaagaatttgtttaccctgttcggtctaatgatgacctactctggaggagagagcagctc 30423345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 15944987 - 15944878
Alignment:
Q  137 tgttgtgaattcgttgc-aaatcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaaa 235  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  15944987 tgttgtgaattcgttgctaaatcacaccaataaa-tttgatgtgtggagcaaataaaccaagcaatcaaatcaagtgggtgaaaatataattcaagcaaa 15944889  T
Q  236 aataaacagca 246  Q
    |||||||||||    
T  15944888 aataaacagca 15944878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 140 - 228
Target Start/End: Complemental strand, 15949859 - 15949770
Alignment:
Q  140 tgtgaattcgttgcaaa-tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattc 228  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||  |||||||| ||||| |||| ||||||||||    
T  15949859 tgtgaattcgttgcaaaatcacaccaagaaaatttgatgtgtggagcaaataaaccaagaaatcaaatcaagtgagtgacaatataattc 15949770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 329
Target Start/End: Original strand, 23179410 - 23179612
Alignment:
Q  137 tgttgtgaattcgttgc--aaatcacaccaataaaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaagc 232  Q
    ||||||||||||||||   ||| ||||||||||||| |||||| |||||| |||| ||  ||||  |||||||| ||| ||||   || ||||||||| |    
T  23179410 tgttgtgaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataattcaaac 23179508  T
Q  233 aaaaataaacagcacgaga------ggaga-gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaac 325  Q
    |||| ||||||||| ||||      | ||| |||||||||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| |    
T  23179509 aaaagtaaacagcaagagataaaaggaagaagaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagc 23179608  T
Q  326 agct 329  Q
    ||||    
T  23179609 agct 23179612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 2266936 - 2267058
Alignment:
Q  137 tgttgtgaattcgttgcaaa--tcacaccaata-aaatttgatgtgtggagtaaataaa-ccaaacaatcaaattaagtgggtga-aaatataattcaag 231  Q
    ||||||||||||||||||||  ||||||||||| ||| |||||||||| || ||||||| |||||||||||||| |||  ||||| ||||| |||||||     
T  2266936 tgttgtgaattcgttgcaaaaatcacaccaatataaacttgatgtgtg-agcaaataaaaccaaacaatcaaatcaagcaggtgacaaata-aattcaaa 2267033  T
Q  232 caaaaataaacagcacgagaggagaga 258  Q
    |||||||||||||||  ||||||||||    
T  2267034 caaaaataaacagca--agaggagaga 2267058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 17799403 - 17799476
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| |||||||||||||||||||||| |||||| || |||  ||||||| |||||| |||||| ||||||    
T  17799403 gaagaaggagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggagagagagcagctc 17799476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 590990 - 590924
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||||||| |||||| |||||| || |||  || |||| ||||||||||||||||||||    
T  590990 aagaacacaagaatttatttacccagttcggtctaatgatgtcctagtctgggggagagaacagctc 590924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 3005617 - 3005675
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||||||||||||| |||||| ||||| | ||||||  |||||||||||||    
T  3005617 agaacacaagaatttgtttacccagttcggtccaaaactgacctggtctgggggagaga 3005675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 9021093 - 9021159
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||||| ||||||| ||||||    
T  9021093 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctggtggagagagcagctc 9021159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 3276501 - 3276465
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcg 293  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3276501 gaagaagaagaacacaagaatttgtttacccagttcg 3276465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 41383003 - 41382948
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  41383003 aagaatttgttgacctagttcggtccaa-attgacctagtctgggggagagagcagc 41382948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 16757253 - 16757320
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  16757253 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 16757320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 25684839 - 25684772
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  25684839 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 25684772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 28328104 - 28328037
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  28328104 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 28328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 28890962 - 28890895
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  28890962 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 28890895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 31035602 - 31035548
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtggagtaaat 189  Q
    |||||||||||||||  ||||||||||||||||||  ||||||||||||| ||||    
T  31035602 tgttgtgaattcgttaaaaatcacaccaataaaatacttgatgtgtggaggaaat 31035548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 3005486 - 3005535
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||||||  |||||||||||||    
T  3005486 tgttgtgaattcgatgaaaatcacaccaataaaatacttgatgtgtggag 3005535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 3874363 - 3874296
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  3874363 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 3874296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 4424371 - 4424304
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  4424371 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 4424304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 18813234 - 18813167
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| |||||||||| ||||| ||||||||| | ||||||||||| ||||    
T  18813234 agaagaacacaaaagaatttgttgacctagttcggtccaa-attgacctaatatgggggagagagcagc 18813167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 22684635 - 22684702
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  22684635 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctaatctgggggagagagcagc 22684702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 27829649 - 27829582
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  27829649 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 27829582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 32339662 - 32339595
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  32339662 agaagaacacaaaagaatttgttaacccagttcggtccaa-attgacctagtctgggggagagagcagc 32339595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 13858478 - 13858533
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||| |||||  ||||| ||||||||| ||||||||||||| ||||    
T  13858478 aagaatttgtttacccagttctgtccaa-attgacctagtctgggggagagagcagc 13858533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 14419184 - 14419239
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  14419184 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 14419239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 25952862 - 25952807
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||||| ||| ||||| ||||||||||||| ||||    
T  25952862 aagaatttgttgacctagttcggtccaa-atttacctagtctgggggagagagcagc 25952807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 26268174 - 26268238
Alignment:
Q  222 ataattcaagcaaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttac 285  Q
    ||||||||| ||||| ||||||||| ||||  | || |||||| |||||||||||||||||||||    
T  26268174 ataattcaaacaaaagtaaacagcaagagataaaaggaagaagtagaacacaagaatttgtttac 26268238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 30480497 - 30480552
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  30480497 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 30480552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 31035459 - 31035404
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctat--tctgggggagagaacagc 328  Q
    |||||||||||| |||||| ||||||| ||||||||  ||||||||||||| ||||    
T  31035459 aatttgtttacccagttcggtccaatactgacctatagtctgggggagagagcagc 31035404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 31162551 - 31162503
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||| |||||| ||||||| ||||||| |||||||| ||||    
T  31162551 aatttgtttacccagttcggtccaatactgacctagtctgggggggaga 31162503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 137 - 330
Target Start/End: Original strand, 15823510 - 15823699
Alignment:
Q  137 tgttgtgaattcgttgcaaa-tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaaa 235  Q
    ||||||||||| |||||||| | |||||||||||||||||||||||||  |||||||  || |||||||| ||||||||||| |||||||||||||||||    
T  15823510 tgttgtgaattggttgcaaaattacaccaataaaatttgatgtgtggaacaaataaataaagcaatcaaaataagtgggtgacaatataattcaagcaaa 15823609  T
Q  236 aataaacagcacgagaggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||     | ||||||||||||| || ||||||||||||||||| | |||| |||||||||||| || ||| || |||||| ||||||    
T  15823610 aataaacagc-----aagagagaagaagaaaaatacaagaatttgtttacccaattcggtccaatattgacttactcttggagagagagcagctc 15823699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 136 - 317
Target Start/End: Original strand, 46966501 - 46966687
Alignment:
Q  136 ctgttgtgaattcgttgcaaa---tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagc 232  Q
    |||||||||||||| | ||||   ||||| |||||||| ||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||| |    
T  46966501 ctgttgtgaattcgctacaaaaattcacagcaataaaacttgatgtgtggagcaaataaaccaagcaatcaaattgagtgggtgacaatataattcaaac 46966600  T
Q  233 aaaaataaacagcacgagaggagagaagaagaagaa--cacaagaatttgtttacctagttcgatccaatattgacctattctgggg 317  Q
    ||||||||| || | |||| ||||||||||||||||  || || |||||||||| | | |||  ||||||||||||||| |||||||    
T  46966601 aaaaataaatagtaagagaagagagaagaagaagaacgcaaaataatttgtttatccaattcagtccaatattgacctactctgggg 46966687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 323
Target Start/End: Complemental strand, 13893732 - 13893601
Alignment:
Q  190 aaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagaggagagaagaagaagaacacaagaatttgtttacctag 289  Q
    |||| |||||||||||| ||| |||||| |||||||||||| ||||| ||||||||| ||||  |  ||||||| ||||||||||||| |||||||| ||    
T  13893732 aaactaaacaatcaaatcaagcgggtgacaatataattcaaacaaaa-taaacagcaggagataaaggaagaaggagaacacaagaatatgtttacccag 13893634  T
Q  290 ttcgatccaatattgacctattctgggggagaga 323  Q
    |||| || |||| ||||||| |||||||||||||    
T  13893633 ttcg-tctaataatgacctactctgggggagaga 13893601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 330
Target Start/End: Complemental strand, 11079845 - 11079647
Alignment:
Q  137 tgttgtgaattcgttgc--aaatcacaccaataaaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaagc 232  Q
    ||||||||||||||||   ||| ||||||||||||| |||||| |||||| |||| ||  ||||  |||||||| ||||||||   || ||||||||| |    
T  11079845 tgttgtgaattcgttgtgaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagcaa-ataattcaaac 11079747  T
Q  233 aaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttacct-agttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||| ||||||||| ||||  | || |||||| ||||||||||||||||||||||| | |||| || |||  ||||||| ||||||||||||| ||||||    
T  11079746 aaaagtaaacagcaagagataaaaggaagaaggagaacacaagaatttgtttacctaatttcggtctaatgatgacctagtctgggggagagagcagctc 11079647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 10897209 - 10897135
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  10897209 agaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 10897135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 330
Target Start/End: Original strand, 47878050 - 47878223
Alignment:
Q  158 cacaccaataaaatttgatgtgtggagtaaataaac-caaacaatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagaggaga 256  Q
    ||||||||||||| |||||| |||||| |||| ||  |||  |||||||| ||||||||   || ||||||||| ||||| ||||||||| ||||  | |    
T  47878050 cacaccaataaaacttgatgcgtggagcaaattaatacaagtaatcaaatcaagtgggtagcaa-ataattcaaacaaaagtaaacagcaagagataaaa 47878148  T
Q  257 g-aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    | |||||  |||||||||||||||||||||| |||||| || |||| ||||||| ||||| ||||||| ||||||    
T  47878149 ggaagaatgagaacacaagaatttgtttacccagttcggtctaataatgacctagtctggaggagagagcagctc 47878223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 28761414 - 28761470
Alignment:
Q  267 aacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  28761414 aacaaaagaatttgtttacccagttcgatccaaaattgacctagtctgggggagaga 28761470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 329
Target Start/End: Original strand, 47882761 - 47882933
Alignment:
Q  158 cacaccaataaaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagaggag 255  Q
    ||||||||||||| |||||| |||||| |||| ||  ||||  |||||||| ||||||||   || ||||||||| ||||| ||||||||| ||||  |     
T  47882761 cacaccaataaaacttgatgcgtggagcaaattaataccaattaatcaaatcaagtgggtagtaa-ataattcaaacaaaagtaaacagcaagagataaa 47882859  T
Q  256 agaa-gaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagct 329  Q
    |||| ||||  ||||||||||||||||||||| ||||||||| |||  |||| || ||| ||||||||| |||||    
T  47882860 agaaagaagg-gaacacaagaatttgtttacccagttcgatctaatgatgacttagtctaggggagagagcagct 47882933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 27761929 - 27762027
Alignment:
Q  222 ataattcaagcaaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctggggga 319  Q
    ||||||||| ||||| ||||||||| ||||  | || ||||||||||||||||||||||||||||| |||||| || |||  ||||||| | |||||||    
T  27761929 ataattcaaacaaaagtaaacagcaagagataaaaggaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtttggggga 27762027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 29913941 - 29914007
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  29913941 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 29914007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 10612765 - 10612830
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  10612765 agaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 10612830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 48390281 - 48390354
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| |||||||||||||||||||||| |||||| |  |||  ||||||| ||||||||||||| ||||||    
T  48390281 gaagaaggagaacacaagaatttgtttacccagttcggtttaatgatgacctagtctgggggagagagcagctc 48390354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 53894031 - 53894104
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  53894031 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 53894104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 5858739 - 5858674
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  5858739 aagaacacaagaatttgtttacc-agttcggtctaatgatgacctagtctgggggagagagcagctc 5858674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 10595020 - 10595086
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| | ||||||||||| ||||||    
T  10595020 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtatgggggagagagcagctc 10595086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 48361663 - 48361720
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||||||||||| ||||||    
T  48361663 aagaatttgttgacccagttcgatccaa-attgacctagtctgggggagagagcagctc 48361720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 10949239 - 10949312
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| |||||||||||||||||||| | |||||  || |||  ||||||| ||||||||||||| ||||||    
T  10949239 gaagaaggagaacacaagaatttgtttatccagttcagtctaatgatgacctagtctgggggagagagcagctc 10949312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 14634291 - 14634339
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtgga 183  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  14634291 tgttgtgaattcgttgaaaatcacaccaataaaatacttgatgtgtgga 14634339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 20031296 - 20031369
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| |||||||||||||||||||||| |||||| |  |||  ||||||| ||| ||||||||| ||||||    
T  20031296 gaagaaggagaacacaagaatttgtttacccagttcggtttaatgatgacctagtcttggggagagagcagctc 20031369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 38003072 - 38003003
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaaca 326  Q
    ||||||| |||||||||||||||||||||  |||||| || |||  ||||||| |||| |||||||||||    
T  38003072 gaagaaggagaacacaagaatttgtttacgcagttcggtctaatgatgacctagtctgagggagagaaca 38003003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 51726987 - 51727054
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  51726987 agaagaacacaaaagaatttgttgacctagttcggtccaa-attgacctagtctgggggagagagcagc 51727054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 43226357 - 43226295
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||||| ||| ||||||||| ||||    
T  43226357 agaacacaagaatttgttgacccagttcggtccaa-attgacctagtctaggggagagagcagc 43226295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 54193423 - 54193356
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  54193423 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 54193356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 4535810 - 4535744
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctggg-ggagagaacagctc 330  Q
    |||||||||||||||||||||| |||||| || |||  ||||||| |||||| ||||||| ||||||    
T  4535810 agaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggaggagagagcagctc 4535744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 320
Target Start/End: Complemental strand, 16997112 - 16997017
Alignment:
Q  228 caagcaaaaataa--acagcacgagaggagagaagaagaagaacacaaga--atttgtttacctagttcgatccaatattgacctattctgggggag 320  Q
    |||||||||||||  |||||| ||||| |||||| |||||||||||||||  ||||||||||| |||||  ||| ||| | ||||| ||||||||||    
T  16997112 caagcaaaaataataacagcaagagagaagagaa-aagaagaacacaagagaatttgtttacccagttcagtcccatacttacctagtctgggggag 16997017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 31021012 - 31021081
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtggagtaaataaaccaaacaatcaa 204  Q
    ||||||||||||||   ||||||||||||||||||  ||||||||||||| |||| ||| || |||||||    
T  31021012 tgttgtgaattcgtcaaaaatcacaccaataaaatacttgatgtgtggagaaaattaactaagcaatcaa 31021081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 1321756 - 1321689
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  1321756 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 1321689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 3330095 - 3330023
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| ||||||||||||||||| |||| |||||| || |||  ||||||||| ||||||| ||| ||||||    
T  3330095 gaagaaggagaacacaagaatttgtgtacccagttcggtctaatgatgacctatt-tgggggacagagcagctc 3330023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 3859804 - 3859737
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  3859804 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 3859737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 7606568 - 7606635
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  7606568 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 7606635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 328
Target Start/End: Original strand, 9604571 - 9604654
Alignment:
Q  247 cgagaggagagaagaaga-agaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||| | ||||||||| |||||||||  ||||||||| |||||||||| || || ||||||||| ||||||||||||| ||||    
T  9604571 cgagagaaaagaagaagagagaacacaaaagaatttgttgacctagttcggtctaa-attgacctagtctgggggagagagcagc 9604654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 10094058 - 10094127
Alignment:
Q  262 agaagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||| ||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  10094058 agaaaaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 10094127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 10100075 - 10100144
Alignment:
Q  262 agaagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||| ||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  10100075 agaaaaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 10100144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 10200938 - 10201007
Alignment:
Q  262 agaagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||| ||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  10200938 agaaaaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 10201007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 27420915 - 27420866
Alignment:
Q  274 gaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||||||||||| ||||| | ||||||| | |||||||||||    
T  27420915 gaatttgtttacctagttcggtccaaaactgacctactatgggggagaga 27420866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 35919095 - 35919162
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  35919095 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 35919162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 36871295 - 36871348
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||| ||||||| |||||| ||||||| ||||||| ||||||||||||| ||||    
T  36871295 aattcgtttacccagttcggtccaatactgacctagtctgggggagagagcagc 36871348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 456325 - 456277
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  456325 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 456277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 458702 - 458654
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  458702 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 458654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 1313674 - 1313619
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  1313674 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 1313619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 5522466 - 5522514
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||| |||||||||| ||||||||||||||| || |||||||||||||    
T  5522466 tgttgcgaattcgttgaaaatcacaccaataacaacttgatgtgtggag 5522514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 5886463 - 5886408
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  5886463 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 5886408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 5899936 - 5899881
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  5899936 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 5899881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 6484625 - 6484570
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  6484625 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 6484570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 10955867 - 10955915
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  10955867 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 10955915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 10958163 - 10958211
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  10958163 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 10958211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 10958315 - 10958370
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  10958315 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 10958370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 16264354 - 16264405
Alignment:
Q  278 ttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||| |||||||||| |||||||| |||||| ||||||||||||| ||||||    
T  16264354 ttgttgacctagttcggtccaatat-gacctaatctgggggagagagcagctc 16264405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 22625969 - 22626029
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| |||||||||||||    
T  22625969 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 22626029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 24979973 - 24979918
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||||||||| ||||||||| | ||||||||||| ||||    
T  24979973 aagaatttgttgacccagttcgatccaa-attgacctagtttgggggagagagcagc 24979918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 25795785 - 25795836
Alignment:
Q  278 ttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||| |||||||||| |||||||| |||||| ||||||||||||| ||||||    
T  25795785 ttgttgacctagttcggtccaatat-gacctaatctgggggagagagcagctc 25795836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 27101173 - 27101228
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| | | |||||| ||||| ||||||||||||||||||||||| ||||    
T  27101173 aagaatttgttgatccagttcggtccaa-attgacctattctgggggagagagcagc 27101228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 27635650 - 27635705
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  27635650 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 27635705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 32143325 - 32143376
Alignment:
Q  278 ttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||| |||||||||| |||||||| |||||| ||||||||||||| ||||||    
T  32143325 ttgttgacctagttcggtccaatat-gacctaatctgggggagagagcagctc 32143376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 41849324 - 41849269
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  41849324 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 41849269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 42990569 - 42990514
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  42990569 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 42990514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 43421407 - 43421462
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  43421407 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 43421462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 47701663 - 47701718
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| | | |||||||||||| ||||||||| ||||||||||||| ||||    
T  47701663 aagaatttgttgatccagttcgatccaa-attgacctaatctgggggagagagcagc 47701718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 137 - 309
Target Start/End: Complemental strand, 45366911 - 45366739
Alignment:
Q  137 tgttgtgaattcgttgcaaa-tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaaa 235  Q
    |||||||||||||||| ||| ||| | |||||||| ||||||||||||| ||||||||||| |||| |||| ||| || ||| |||||||||||||||||    
T  45366911 tgttgtgaattcgttgtaaaatcaaatcaataaaacttgatgtgtggaggaaataaaccaagcaattaaatcaagcggctgacaatataattcaagcaaa 45366812  T
Q  236 aataaacagcacgagaggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgaccta 309  Q
     |||||||  | ||||||||||||||||||  ||| ||||||||||||| | | |||| | ||||||| |||||    
T  45366811 tataaacactaagagaggagagaagaagaa-cacaaaagaatttgtttatccaattcggttcaatatttaccta 45366739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 34546858 - 34546932
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  34546858 agaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 34546932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 7464497 - 7464571
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| ||||||| ||||| ||||||    
T  7464497 agaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctggggaagagagcagctc 7464571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 25351547 - 25351481
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||||||||||    
T  25351547 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagaacagctc 25351481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 330
Target Start/End: Original strand, 44010693 - 44010802
Alignment:
Q  222 ataattcaagcaaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggag 320  Q
    ||||||||| ||||| ||||||||| ||||  | || |||||| ||||||||| |||||||||||| |||||| || |||  ||||||| ||||||||||    
T  44010693 ataattcaaacaaaagtaaacagcaagagataaaaggaagaaggagaacacaataatttgtttaccaagttcggtctaatgatgacctagtctgggggag 44010792  T
Q  321 agaacagctc 330  Q
    ||| ||||||    
T  44010793 agagcagctc 44010802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 330
Target Start/End: Complemental strand, 2121229 - 2121029
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaata-aaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaagca 233  Q
    ||||||||||||||||  || |||||||||| ||| ||||||||||||| |||| ||  |||| ||||||||| |||||| |   ||| |||| ||| ||    
T  2121229 tgttgtgaattcgttgagaaacacaccaatataaacttgatgtgtggagcaaattaataccaagcaatcaaatcaagtggatagcaat-taatccaaaca 2121131  T
Q  234 aaaataaa-cagcacgaga-----ggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacag 327  Q
    ||| |||| ||||| ||||     ||| ||||||||| ||||||||||||||||||||| | |||| || |||  ||||||| ||||||||||||| |||    
T  2121130 aaagtaaaacagcaagagataaaagga-agaagaagatgaacacaagaatttgtttacccaattcggtctaatgatgacctagtctgggggagagagcag 2121032  T
Q  328 ctc 330  Q
    |||    
T  2121031 ctc 2121029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 2075315 - 2075246
Alignment:
Q  260 gaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagct 329  Q
    |||| |||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| |||||    
T  2075315 gaaggagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagct 2075246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 44016640 - 44016713
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| |||||||||||||||||||||| | |||| || |||  ||||||| ||||||||||||| ||||||    
T  44016640 gaagaaggagaacacaagaatttgtttacccaattcggtctaatgatgacctagtctgggggagagagcagctc 44016713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 11081803 - 11081755
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  11081803 aatttgtttacccagttcggtccaatattgacctagtctgggggagaga 11081755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 25410322 - 25410260
Alignment:
Q  268 acacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  25410322 acacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 25410260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 6332514 - 6332462
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacag 327  Q
    |||||||||||| |||||| ||||||| ||||||| ||| |||||||||||||    
T  6332514 aatttgtttacccagttcggtccaatactgacctagtctaggggagagaacag 6332462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 330
Target Start/End: Original strand, 15540976 - 15541048
Alignment:
Q  259 agaagaagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||| |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  15540976 agaaaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 15541048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 330
Target Start/End: Complemental strand, 21369904 - 21369772
Alignment:
Q  199 aatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagaggagagaagaagaagaacacaag-aatttgtttacctagttcgatcc 297  Q
    |||||||| ||| |||||| || |||||||||  |||||||||||||| ||||  |  || |||| ||| |||||| || ||||||||| |||||| |||    
T  21369904 aatcaaatcaagcgggtgacaaaataattcaaataaaaataaacagcaagagataaaggatgaaggagaccacaagaaaattgtttacccagttcggtcc 21369805  T
Q  298 aatattgacctattctgggggagagaacagctc 330  Q
    |||  ||||||| | ||| ||||||| ||||||    
T  21369804 aatgatgacctactatggcggagagagcagctc 21369772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 2935581 - 2935508
Alignment:
Q  256 agaagaagaagaacacaag--aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||||||||||  |||||||| ||| |||||| ||||||  ||||||| ||||||||||||| ||||    
T  2935581 agaagaagaagaacacaaggaaatttgttgacccagttcggtccaat-ctgacctagtctgggggagagagcagc 2935508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 22108379 - 22108306
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| |||||| | |||||| ||||||||||||| ||||    
T  22108379 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaatct-gacctagtctgggggagagagcagc 22108306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 22137390 - 22137317
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| |||||| | |||||| ||||||||||||| ||||    
T  22137390 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaatct-gacctagtctgggggagagagcagc 22137317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 25357237 - 25357182
Alignment:
Q  268 acacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||||||||| |||||| || |||  ||||||| |||||||||||||    
T  25357237 acacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 25357182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 25405589 - 25405522
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  25405589 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 25405522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 40550139 - 40550066
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| |||||| | |||||| ||||||||||||| ||||    
T  40550139 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaatct-gacctagtctgggggagagagcagc 40550066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 40552417 - 40552344
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| |||||| | |||||| ||||||||||||| ||||    
T  40552417 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaatct-gacctagtctgggggagagagcagc 40552344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 3320037 - 3320103
Alignment:
Q  265 agaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  3320037 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 3320103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 3324785 - 3324851
Alignment:
Q  265 agaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  3324785 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 3324851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 330
Target Start/End: Original strand, 6067067 - 6067250
Alignment:
Q  154 aaatcacaccaataaa-atttgatgtgtggagtaaataaaccaaacaatcaa-attaagtgggtgaaaat-ataatt-caagcaaaaataa--acagcac 247  Q
    |||||||||||| ||| | ||||||||||||| |||| || ||||||||||| || |||||| | | ||| ||||   |||||||||||||  ||| ||     
T  6067067 aaatcacaccaacaaatacttgatgtgtggagcaaattaatcaaacaatcaatatcaagtggataacaattataaccgcaagcaaaaataataacaacaa 6067166  T
Q  248 gagaggagagaagaagaagaacacaaga--atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||| | |||| ||||||||||| |||  ||||||||||| ||| || ||||||| ||||||| | ||||||||||| ||||||    
T  6067167 gagagaaaagaa-aagaagaacacgagagaatttgtttacccagtccggtccaatactgacctagtatgggggagagagcagctc 6067250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 40946636 - 40946568
Alignment:
Q  261 aagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  40946636 aagaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 40946568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 44512504 - 44512577
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||| |||||||||||||||||||| |||||| || |||  ||||||| |||  |||||||| ||||||    
T  44512504 agaagaagaataacacaagaatttgtttacccagttcggtctaatgatgacctagtct-agggagagagcagctc 44512577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 7471962 - 7472029
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  7471962 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 7472029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 9681112 - 9681060
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||| || |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  9681112 aatttattgacctagttcgatccaa-attgacctagtctgggggagagagcagc 9681060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 18345848 - 18345781
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| || ||| ||||| ||||||||| ||||||||||||||||||    
T  18345848 agaagaacacaaaagaatttgttgacccagctcggtccaa-attgacctagtctgggggagagaacagc 18345781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 38394293 - 38394226
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  38394293 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 38394226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 40836725 - 40836792
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  40836725 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 40836792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 43253357 - 43253406
Alignment:
Q  136 ctgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    |||||| ||||||| || ||||||||||||||| ||||||||||||||||    
T  43253357 ctgttgcgaattcgatgaaaatcacaccaataacaatttgatgtgtggag 43253406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 48457960 - 48457893
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  48457960 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 48457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 1049290 - 1049345
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  1049290 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 1049345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 3036019 - 3035964
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  3036019 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 3035964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 8378489 - 8378549
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| |||||||||||||    
T  8378489 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagaga 8378549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 11759434 - 11759372
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| |||||||||||||    
T  11759434 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagaga 11759372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 13099468 - 13099523
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  13099468 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 13099523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 13290341 - 13290393
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaa-atttgatgtgtggagtaaa 188  Q
    |||||||| ||||||  |||||||||||||||| | |||||||||||||||||    
T  13290341 tgttgtgatttcgttaaaaatcacaccaataaatacttgatgtgtggagtaaa 13290393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 20299767 - 20299705
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| |||||||||||||    
T  20299767 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagaga 20299705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 20626333 - 20626278
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  20626333 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 20626278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 20630224 - 20630169
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  20630224 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 20630169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 20642643 - 20642588
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  20642643 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 20642588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 27306204 - 27306279
Alignment:
Q  253 gagagaagaaga-agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||| ||||||| |||||||||||||||||| ||| |||| | ||||| ||||||||| ||| ||||||||| ||||    
T  27306204 gagaaaagaagagagaacacaagaatttgttgacccagtttggtccaa-attgacctagtctaggggagagagcagc 27306279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 28617318 - 28617267
Alignment:
Q  278 ttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||| |||||| |||||||| |||||| ||||||||||||| ||||||    
T  28617318 ttgtttacccagttcggtccaatat-gacctactctgggggagagagcagctc 28617267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 42330991 - 42331042
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaa 324  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||||    
T  42330991 aagaatttgttgacccagttcggtccaa-attgacctaatctgggggagagaa 42331042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 44724874 - 44724819
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  44724874 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 44724819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 9e-21; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 136 - 330
Target Start/End: Original strand, 27517490 - 27517691
Alignment:
Q  136 ctgttgtgaattcgttgc--aaatcacaccaataaaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaag 231  Q
    |||||||||||||||||   ||| ||||||||||||| |||||| |||||| |||| ||  ||||  |||||||| ||| ||||   || ||||| |||     
T  27517490 ctgttgtgaattcgttgagaaaaccacaccaataaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagcgggtagcaa-ataatccaaa 27517588  T
Q  232 caaaaataaacagcacgaga----ggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacag 327  Q
    |||||||||||| || ||||    ||  ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| |||    
T  27517589 caaaaataaacaacaagagataaagggaagaagaagaagaacacaagaatttgtttaccaagttcggtctaatgatgacctagtctgggggagagagcag 27517688  T
Q  328 ctc 330  Q
    |||    
T  27517689 ctc 27517691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 34575123 - 34575188
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||    
T  34575123 agaacacaaaaatttgtttacctagttcgatccaatgctgacctagtctgggggagagagcagctc 34575188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 330
Target Start/End: Complemental strand, 30479301 - 30479124
Alignment:
Q  158 cacaccaataaaatttgatgtgtggagtaaataaacc--aaacaatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgaga---- 251  Q
    |||| |||||| | |||||| ||||||||||| |||   ||| |||||||| ||||||||   || ||||| ||| ||||||||||||||| ||||        
T  30479301 cacatcaataatacttgatgcgtggagtaaattaacacaaaataatcaaatcaagtgggtagcaa-ataatccaaacaaaaataaacagcaagagataaa 30479203  T
Q  252 -ggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
     ||| ||||||||||||| ||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  30479202 agga-agaagaagaagaatacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 30479124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 17943731 - 17943665
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||||||||||||||||||||| || |||  ||||||| ||||||||||||| ||||||    
T  17943731 aagaacacaagaatttgtttacctagttcggtctaatgatgacctagtctgggggagagagcagctc 17943665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 20054743 - 20054817
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| ||||| ||||||| ||||||    
T  20054743 agaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctggtggagagagcagctc 20054817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 20049999 - 20050074
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattct-gggggagagaacagctc 330  Q
    ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| ||| |||||||||| ||||||    
T  20049999 agaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctggggggagagagcagctc 20050074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 12781207 - 12781273
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||| ||||||||||||||||||| || |||  ||||||| ||||||||||||| ||||||    
T  12781207 aagaacacaataatttgtttacctagttcggtctaatgatgacctagtctgggggagagagcagctc 12781273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 38191215 - 38191142
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| |||||||||||||||||||||| |||||| || |||  ||||||| ||| ||||||||| ||||||    
T  38191215 gaagaaggagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctaggggagagagcagctc 38191142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 28458749 - 28458873
Alignment:
Q  199 aatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagaggagagaagaagaagaacacaagaatttgtttacctagttcgatcca 298  Q
    |||||||| ||| | |||| || ||||||||||||||||||||||||| | ||  |  || |||| |||||||||||| ||||||||| |||| | || |    
T  28458749 aatcaaatcaagcgagtgacaaaataattcaagcaaaaataaacagcaagggataaaggacgaaggagaacacaagaaattgtttacccagtttggtcta 28458848  T
Q  299 atattgacctattctgggggagaga 323  Q
    ||  ||||||| ||| |||||||||    
T  28458849 atgatgacctactctaggggagaga 28458873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 2741137 - 2741070
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| |||||||||||||||||| || |||  ||||||| ||||||||||||| ||||||    
T  2741137 aagaacacaagatatttgtttacctagttcggtctaatgatgacctagtctgggggagagagcagctc 2741070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 288
Target Start/End: Original strand, 37170607 - 37170763
Alignment:
Q  137 tgttgtgaattcgttgc--aaatcacaccaataaaat-ttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaag 231  Q
    ||||||||||||||||   |||||||||||||||||  |||||| |||||| |||| ||  ||||  |||||||| ||||||||   || |||||||||     
T  37170607 tgttgtgaattcgttgtgaaaatcacaccaataaaaacttgatgcgtggagcaaattaataccaagtaatcaaatcaagtgggtagtaa-ataattcaaa 37170705  T
Q  232 caaaaataaacagcacgagaggagag-aagaagaagaacacaagaatttgtttaccta 288  Q
    ||||| ||||||||| ||||  | || |||||| ||||||||| ||||||||||||||    
T  37170706 caaaagtaaacagcaagagataaaaggaagaaggagaacacaataatttgtttaccta 37170763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 22163016 - 22163073
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||||||||||| ||||||    
T  22163016 aagaatttgttgacccagttcgatccaa-attgacctagtctgggggagagagcagctc 22163073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 10942505 - 10942562
Alignment:
Q  273 agaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||| ||||||| ||||||| ||| ||||||| | ||||||    
T  10942505 agaatttgtttacctagttcggtccaatactgacctactctaggggagacaccagctc 10942562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 10948374 - 10948431
Alignment:
Q  273 agaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||| ||||||| ||||||| ||| ||||||| | ||||||    
T  10948374 agaatttgtttacctagttcggtccaatactgacctactctaggggagacaccagctc 10948431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 19007901 - 19007846
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  19007901 aagaatttgttgacctagttcggtccaa-attgacctagtctgggggagagagcagc 19007846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 2736401 - 2736334
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  2736401 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 2736334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 17462632 - 17462565
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  17462632 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 17462565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 36561117 - 36561190
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| ||||||  ||||||| ||||||||||||| ||||    
T  36561117 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaat-ctgacctagtctgggggagagagcagc 36561190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 39687179 - 39687112
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  39687179 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 39687112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 45679919 - 45679852
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  45679919 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 45679852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 13828177 - 13828226
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaa--atttgatgtgtggag 184  Q
    |||||||||||||||  ||||||||||||||||  |||||||||||||||    
T  13828177 tgttgtgaattcgttaaaaatcacaccaataaaatatttgatgtgtggag 13828226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 31732763 - 31732820
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||| ||||||||||||| || ||| ||||| ||||||||| |||||||||||||    
T  31732763 agaacacacgaatttgtttacccagctcggtccaa-attgacctagtctgggggagaga 31732820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 39680240 - 39680174
Alignment:
Q  265 agaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  39680240 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 39680174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 42064789 - 42064720
Alignment:
Q  261 aagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||||  ||||||||| ||| |||||| |||||  |||||||| ||||||||||||| ||||    
T  42064789 aagaagaacacaaaagaatttgttgacccagttcggtccaaatttgacctagtctgggggagagagcagc 42064720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 13910027 - 13910094
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  13910027 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 13910094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 19501993 - 19502060
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  19501993 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 19502060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 23452219 - 23452286
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  23452219 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 23452286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 27105070 - 27105003
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  27105070 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 27105003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 3022433 - 3022378
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  3022433 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 3022378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 5375340 - 5375395
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  5375340 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 5375395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 6264142 - 6264197
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  6264142 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 6264197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 8173589 - 8173541
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    |||||||||||| |||||| ||||||| ||||||| | |||||||||||    
T  8173589 aatttgtttacccagttcggtccaatactgacctagtatgggggagaga 8173541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 19504178 - 19504226
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  19504178 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 19504226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 22407448 - 22407503
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  22407448 aagaatttgttgaccaagttcggtccaa-attgacctagtctgggggagagagcagc 22407503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 40699634 - 40699590
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctggggga 319  Q
    ||||||||||||||||||| || |||| ||||||| |||||||||    
T  40699634 aatttgtttacctagttcggtctaatactgacctagtctggggga 40699590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 42453890 - 42453842
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  42453890 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 42453842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 43623574 - 43623629
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||||| ||||||||| | ||||||||||| ||||    
T  43623574 aagaatttgttgacctagttcggtccaa-attgacctagtttgggggagagagcagc 43623629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 323
Target Start/End: Original strand, 22351704 - 22351897
Alignment:
Q  137 tgttgtgaattcgttgcaaa--tcacaccaataaaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattcaag- 231  Q
    |||||||||||||||| |||  |||||||||||||| ||||||||||||| |||| ||  ||||  |||||||| ||| |||| | || ||||| |||      
T  22351704 tgttgtgaattcgttgtaaaaatcacaccaataaaacttgatgtgtggagcaaattaataccaagtaatcaaatcaagcgggtaacaa-ataatccaaaa 22351802  T
Q  232 caaaaataaacagcacgaga-----ggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||| ||||||||| ||||     ||| ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| |||||||||||||    
T  22351803 caaaagtaaacagcaagagataaaagga-agaagaagaagaacacaagaatttgtttacccagttcg-tctaatgatgacctagtctgggggagaga 22351897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 25941873 - 25941799
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  25941873 agaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 25941799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 330
Target Start/End: Original strand, 24501303 - 24501501
Alignment:
Q  139 ttgtgaattcgttgcaaa-tcacaccaataaaatttgatgtgtggagtaaataaaccaaacaatcaa-attaagtgggtga-aaatataattcaagcaaa 235  Q
    |||||||||||||| ||| ||||||||||||||  |||||||| |||||||| |||||| ||| ||| || || ||| ||| || |||||  |||||||     
T  24501303 ttgtgaattcgttgaaaaatcacaccaataaaacatgatgtgtagagtaaattaaccaagcaaccaatatcaaatggatgacaattataaaacaagcaag 24501402  T
Q  236 aata--aacagcacgagaggagagaagaagaagaacac--aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||  || |||| |||| ||||||||||||| |||||  ||||| ||||||||| |||||| |  |||| |||||||||| |||| ||||| ||||||    
T  24501403 aataataatagcaagagatgagagaagaagaaaaacacaaaagaagttgtttacccagttcggtataatactgacctattcaggggaagagagcagctc 24501501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 329
Target Start/End: Complemental strand, 17066141 - 17065983
Alignment:
Q  173 tgatgtgtggagtaaat--aaaccaaacaatcaaattaagtgggtgaaaatataattcaagcaaaaataaacagcacgagaggagagaagaagaagaaca 270  Q
    ||||| |||||||||||  ||| ||| ||||||||| |||  ||||| |||||||||||| ||||||||||||||| ||||  |  ||||||| |||||     
T  17066141 tgatgcgtggagtaaattaaaatcaagcaatcaaatcaagctggtgacaatataattcaaacaaaaataaacagcaagagataaaggaagaaggagaacc 17066042  T
Q  271 caagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagct 329  Q
    ||| ||| |||||| | |||||| || |||  ||||||| | ||||||||||| |||||    
T  17066041 caataatctgtttatccagttcggtctaatgatgacctactttgggggagagagcagct 17065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 137 - 330
Target Start/End: Original strand, 22342652 - 22342853
Alignment:
Q  137 tgttgtgaattcgttgcaaa--tcacaccaataaaatttgatgtgtggagtaaataaa--ccaaacaatcaaattaagtgggtgaaaatataattca-ag 231  Q
    |||||||||||||||| |||  |||||||||||||| ||||||| ||||| |||| ||  ||||| |||||||| ||| ||||   || ||||| || |     
T  22342652 tgttgtgaattcgttgtaaaaatcacaccaataaaacttgatgtatggagcaaattaataccaaataatcaaatcaagcgggtagcaa-ataatccataa 22342750  T
Q  232 caaaaataaacagcacgaga-----ggagagaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaaca 326  Q
    ||||| ||||||||| ||||     ||| |||||| |||||||||||||||||||||||| |||||| || |||  ||||||| ||| ||||||||| ||    
T  22342751 caaaagtaaacagcaagagataaaagga-agaagatgaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctaggggagagagca 22342849  T
Q  327 gctc 330  Q
    ||||    
T  22342850 gctc 22342853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 3577468 - 3577541
Alignment:
Q  256 agaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||||||||||| |||||| || |||  ||||||| ||| ||||||||| ||||||    
T  3577468 agaagaagaagaacacaagaatttgtttacccagttcggtctaatgatgacctagtct-ggggagagagcagctc 3577541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 13467446 - 13467518
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||| ||||||||||||||||||||||||||||| || |||  ||||||| ||| ||||||||| ||||||    
T  13467446 gaagaaggagaacacaagaatttgtttacctagttcggtctaatcatgacctagtct-ggggagagagcagctc 13467518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 17012358 - 17012310
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  17012358 aatttgtttacctagttcggtccaatactgacctagtctgggggagaga 17012310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 17694838 - 17694904
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||| ||||||||| ||||||    
T  17694838 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctaggggagagagcagctc 17694904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 330
Target Start/End: Original strand, 25465881 - 25465951
Alignment:
Q  260 gaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||||| |||||||||||| |||||| || |||  || |||| ||||||||||||| ||||||    
T  25465881 gaagaagaacacaataatttgtttacccagttcggtctaatgatggcctagtctgggggagagagcagctc 25465951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 12166126 - 12166198
Alignment:
Q  258 aagaagaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||| |||||||||||||||||||||| |||||| || |||  ||||||| ||| ||||||| | ||||||    
T  12166126 aagaaggagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctaggggagatagcagctc 12166198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 13878923 - 13878856
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  13878923 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 13878856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 16786115 - 16786048
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  16786115 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 16786048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 20915339 - 20915405
Alignment:
Q  262 agaagaacaca-agaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| |||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  20915339 agaagaacacagagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 20915405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 29754685 - 29754758
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| ||||||  ||||||| ||||||||||||| ||||    
T  29754685 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaat-ctgacctagtctgggggagagagcagc 29754758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 13883670 - 13883604
Alignment:
Q  265 agaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  13883670 agaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 13883604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 15346664 - 15346611
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagct 329  Q
    |||||||||||| |||||| ||||| ||||||||| ||||||||||||| |||||    
T  15346664 aatttgtttacccagttcggtccaa-attgacctagtctgggggagagagcagct 15346611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 19696759 - 19696705
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagct 329  Q
    |||||||||||| |||||| ||||||| ||||||| |||||| |||||| |||||    
T  19696759 aatttgtttacccagttcggtccaatactgacctagtctgggagagagagcagct 19696705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 25078416 - 25078469
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaaat--ttgatgtgtggagtaaa 188  Q
    |||||||||||||||  ||||||||||| ||||||  |||||||||||||||||    
T  25078416 tgttgtgaattcgttaaaaatcacaccagtaaaatacttgatgtgtggagtaaa 25078469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 30443613 - 30443551
Alignment:
Q  268 acacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||| |||||||||||| |||||| ||||||| | ||||| ||| ||||||||| ||||||    
T  30443613 acacaaaaatttgtttacccagttcggtccaatacttacctagtctcggggagagagcagctc 30443551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 35201313 - 35201379
Alignment:
Q  265 agaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||| ||||||||||| |||||| || |||| ||||||| ||| ||||||||| ||||||    
T  35201313 agaacacaagatatttgtttacccagttcggtctaataatgacctagtcttggggagagagcagctc 35201379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 1230231 - 1230298
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  1230231 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 1230298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 4816213 - 4816280
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  4816213 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 4816280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 14458749 - 14458816
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  14458749 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 14458816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 14507158 - 14507225
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  14507158 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 14507225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 22857949 - 22858002
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||  |||||| ||||||| ||||||| ||||||||||||| ||||    
T  22857949 aatttgtttacacagttcggtccaatactgacctagtctgggggagagagcagc 22858002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 33216022 - 33215957
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||||||||||||| |||||| || |||  ||||||| | ||||||| ||| ||||||    
T  33216022 agaacacaagaatttgtttacccagttcggtctaatgatgacctagtatgggggatagagcagctc 33215957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 33311599 - 33311550
Alignment:
Q  136 ctgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    |||||||||||||| || ||||||||||||||| || |||||||||||||    
T  33311599 ctgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 33311550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 11262777 - 11262729
Alignment:
Q  275 aatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||  ||||| ||||||| ||||||| |||||||||||||    
T  11262777 aatttgtttaccccgttcggtccaatactgacctagtctgggggagaga 11262729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 11983023 - 11983078
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  11983023 aagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 11983078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 26643377 - 26643341
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcg 293  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  26643377 gaagaaggagaacacaagaatttgtttacccagttcg 26643341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 26749343 - 26749307
Alignment:
Q  257 gaagaagaagaacacaagaatttgtttacctagttcg 293  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  26749343 gaagaaggagaacacaagaatttgtttacccagttcg 26749307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 28241163 - 28241211
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  28241163 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 28241211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 30967673 - 30967625
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||| |||||||||| ||||||||||||||| || |||||||||||||    
T  30967673 tgttgcgaattcgttgaaaatcacaccaataacaacttgatgtgtggag 30967625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 33309329 - 33309281
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  33309329 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 33309281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 16972 - 17038
Alignment:
Q  264 aagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  16972 aagaacacaagaatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 17038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 16528 - 16455
Alignment:
Q  258 aagaagaagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||| |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  16528 aagaaaaagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 16455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 50318 - 50258
Alignment:
Q  262 agaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||||||||||| ||| |||| | ||||| ||||||||| |||||||||||||    
T  50318 agaagaacacaagaatttgttgacccagttaggtccaa-attgacctagtctgggggagaga 50258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 52317 - 52257
Alignment:
Q  262 agaagaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagaga 323  Q
    ||||||||||||||||||||| ||| |||| | ||||| ||||||||| |||||||||||||    
T  52317 agaagaacacaagaatttgttgacccagtttggtccaa-attgacctagtctgggggagaga 52257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 3055 - 3122
Alignment:
Q  264 aagaacacaaga-atttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    |||||||||||| ||||||||||| |||||| || |||  ||||||| ||||||||||||| ||||||    
T  3055 aagaacacaagatatttgtttacccagttcggtctaatgatgacctagtctgggggagagagcagctc 3122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 22427 - 22354
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| |||||| | |||||| ||||||||||||| ||||    
T  22427 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaatct-gacctagtctgggggagagagcagc 22354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 24702 - 24629
Alignment:
Q  256 agaagaagaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||||||||  ||||||||| ||| |||||| |||||| | |||||| ||||||||||||| ||||    
T  24702 agaagaagaagaacacaaaggaatttgttgacccagttcggtccaatct-gacctagtctgggggagagagcagc 24629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 14369 - 14431
Alignment:
Q  265 agaacacaagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||||| ||| ||||||||| ||||    
T  14369 agaacacaagaatttgttgacccagttcggtccaa-attgacctagtctaggggagagagcagc 14431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 14231 - 14279
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  14231 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 14279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 69274 - 69343
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||||    
T  69274 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagctc 69343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 69131 - 69182
Alignment:
Q  135 actgttgtgaattcgttgcaaatcacaccaata--aaatttgatgtgtggag 184  Q
    ||||||||||||||| || ||||||||||||||  ||| |||||||||||||    
T  69131 actgttgtgaattcgatgaaaatcacaccaataacaaacttgatgtgtggag 69182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 1435 - 1502
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  1435 agaagaacacaaaagaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 1502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 29476 - 29409
Alignment:
Q  262 agaagaacacaa--gaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||||  ||||||||| ||| |||||| ||||| ||||||||| ||||||||||||| ||||    
T  29476 agaagaacacaaacgaatttgttgacccagttcggtccaa-attgacctagtctgggggagagagcagc 29409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 57430 - 57479
Alignment:
Q  281 tttacctagttcgatccaatattgacctattctgggggagagaacagctc 330  Q
    ||||||||||||  ||||||| ||||||| ||||||||||||| ||||||    
T  57430 tttacctagttccgtccaatactgacctagtctgggggagagagcagctc 57479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 1493 - 1541
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataaa-atttgatgtgtggag 184  Q
    ||||||||||||  || |||||||||||||||| |||||||||||||||    
T  1493 tgttgtgaattcaatgaaaatcacaccaataaatatttgatgtgtggag 1541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 41325 - 41373
Alignment:
Q  137 tgttgtgaattcgttgcaaatcacaccaataa-aatttgatgtgtggag 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  41325 tgttgtgaattcgatgaaaatcacaccaataacaacttgatgtgtggag 41373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 80153 - 80098
Alignment:
Q  272 aagaatttgtttacctagttcgatccaatattgacctattctgggggagagaacagc 328  Q
    ||||||||||| ||| ||||| |||||| ||||||||| ||||||||||||| ||||    
T  80153 aagaatttgttgacccagttcaatccaa-attgacctagtctgggggagagagcagc 80098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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