View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0243_low_6 (Length: 525)
Name: NF0243_low_6
Description: NF0243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0243_low_6 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 346; Significance: 0; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 30 - 459
Target Start/End: Complemental strand, 22435632 - 22435203
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactctaagtagagtacgcttagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagagc |
129 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22435632 |
ggtattggaggcatgacatcgctacaaactctaagtaaagttaaattagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagagc |
22435533 |
T |
|
| Q |
130 |
taggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataagatgcaacaactaga |
229 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22435532 |
taggaaagctaacacagcttagggaattgggcttggttgttgttagtggtaaatatatgagtgctatatcttcctcaatcaataagatgcatgaactaga |
22435433 |
T |
|
| Q |
230 |
gaaattaaatatttttggaatcaaattagacattttcattgatctggatttgaattcacccccacctaggcttgaacgtgttaaactctttggatattta |
329 |
Q |
| |
|
|| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22435432 |
gagactgcatatttttggaatcaaattagacattttcattgatctggatttgaattcacccccacctaggcttgaacgtgttaaactctttggatattca |
22435333 |
T |
|
| Q |
330 |
aataagtttcctgagtggatctcaaaactccaaaatcttgttaagctggatttgccacgtttgaaggaagtgaatgatgcaatgaaattactccaactta |
429 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
22435332 |
aataagtttcctgagtggatttcaaaactccaaaatcttgttaagctggatttgccacgtttgaaggaagtgaatgatgcaatgaaattacttcaaagta |
22435233 |
T |
|
| Q |
430 |
tgccaaacttgctgtccctccatatctctg |
459 |
Q |
| |
|
||||||||||| |||||||||||||||||| |
|
|
| T |
22435232 |
tgccaaacttgttgtccctccatatctctg |
22435203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 31 - 449
Target Start/End: Complemental strand, 22629443 - 22629025
Alignment:
| Q |
31 |
gtattggaggcatgacatccctacaaactctaagtagagtacgcttagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagagct |
130 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| || | ||||||||| |||||||||||||||||||| || |||||||||||| ||| || |
|
|
| T |
22629443 |
gtattggaggcatgacatccctacaaactctaaatagtgtttgtttagatgataaggaagatgaaaatgataatagagtggtagagctaatcgaagatct |
22629344 |
T |
|
| Q |
131 |
aggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataagatgcaacaactagag |
230 |
Q |
| |
|
||||||| ||| || || |||||||||| |||| | | |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
22629343 |
aggaaagctaaatcagctaagggaattggtcttgctcggtgttaggagtaaatatatgagtgctatatcttcctcaatcaataagatgcaacaattggag |
22629244 |
T |
|
| Q |
231 |
aaattaaatatttttggaatcaaattagacattttcattgatctggatttgaattcacccccacctaggcttgaacgtgttaaactctttggatatttaa |
330 |
Q |
| |
|
||| || | ||| |||| || ||| |||| |||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||| | |
|
|
| T |
22629243 |
aaactacaaattagtggagtccaatatgacacattcattgatctggattagaagtcacccccacctaggcttcaacgtgttaaactctatggatatttta |
22629144 |
T |
|
| Q |
331 |
ataagtttcctgagtggatctcaaaactccaaaatcttgttaagctggatttgccacgtttgaaggaagtgaatgatgcaatgaaattactccaacttat |
430 |
Q |
| |
|
| || || ||||||||||| ||||||||||| ||||||||||||||| || | | |||| ||| ||||||||||||||||||||||||| ||| |
|
|
| T |
22629143 |
agaaattacctgagtggatttcaaaactccagaatcttgttaagctgagagtgatgcttacgaagcaagggaatgatgcaatgaaattactccaaagtat |
22629044 |
T |
|
| Q |
431 |
gccaaacttgctgtccctc |
449 |
Q |
| |
|
|| ||| |||||||||||| |
|
|
| T |
22629043 |
gcgaaaattgctgtccctc |
22629025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 30 - 457
Target Start/End: Complemental strand, 22441746 - 22441316
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactctaagtagagtacgcttagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagagc |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||| ||||| ||||| ||||||||||||||| || |||||||||||| ||||| |
|
|
| T |
22441746 |
ggtattggaggcatgacatccctacaaactctaagtggagtacacttaaatgatagtgaacgtgaaaatgataatagagttgtagagctaatccaagagc |
22441647 |
T |
|
| Q |
130 |
taggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataagatgcaacaactaga |
229 |
Q |
| |
|
|||||||| ||| ||| || ||| ||||||||||| | |||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| | || |
|
|
| T |
22441646 |
taggaaagctaaaacagctaaggaaattgggcttgaccggtgttaggagtaaatatatgagtgctatatctttctcaatcaacgagatgcaacaattgga |
22441547 |
T |
|
| Q |
230 |
gaaattaaatatttttggaatcaaat-ta--gacattttcattgatctggatttgaattcacccccacctaggcttgaacgtgttaaactctttggatat |
326 |
Q |
| |
|
|||| ||| |||| |||| || ||| || ||| |||||||||||||||||||||||||||||||||| |||| ||| ||||||| || || || |
|
|
| T |
22441546 |
gaaactaattattagtggagtccaatctactaacacattcattgatctggatttgaattcacccccacctaagcttcaacatgttaaattcgacgggaat |
22441447 |
T |
|
| Q |
327 |
ttaaataagtttcctgagtggatctcaaaactccaaaatcttgttaagctggatttgccacgtttgaaggaagtgaatgatgcaatgaaattactccaac |
426 |
Q |
| |
|
||| ||||||||||||||||||| ||||||| ||| ||||||||||| || ||| | |||| || ||||||||||||||||||||| | |
|
|
| T |
22441446 |
ttatataagtttcctgagtggattcaaaaactcagaaaccttgttaagcttagagtgacacttacgaagcaacaaaatgatgcaatgaaattactcataa |
22441347 |
T |
|
| Q |
427 |
ttatgccaaacttgctgtccctccatatctc |
457 |
Q |
| |
|
||||||||||||| |||||||||||||||| |
|
|
| T |
22441346 |
gtatgccaaacttgttgtccctccatatctc |
22441316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 30 - 459
Target Start/End: Complemental strand, 22366925 - 22366493
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactctaagtagagtacgcttagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagagc |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | || ||| ||||| ||||||||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
22366925 |
ggtattggaggcatgacatccctacaaactctaaatgaggtttatttatatgatcatgaagatgaaaatgataatagagtcgtagagctaattgaagagc |
22366826 |
T |
|
| Q |
130 |
taggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataagatgcaacaactaga |
229 |
Q |
| |
|
||||||| ||| || || |||||||||||||||| | |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
22366825 |
taggaaaactaaagcagctaagggaattgggcttggccggtgttaggagtaaatatatgagtgctatatcttcttcaatcaataagatgcaacaactgga |
22366726 |
T |
|
| Q |
230 |
gaaattaaatatttttggaatcaaattagacattttcattgatctggatttgaattcacccccacctaggcttgaacgtgttaaactctttggatattta |
329 |
Q |
| |
|
|||| |||||||| |||| || ||| || | |||||||||||||||||||||||||||||||||| |||| ||| | || ||||| || ||||| |
|
|
| T |
22366725 |
gaaactaaatattagtggagtcgaatatgagacattcattgatctggatttgaattcacccccacctatgcttcaacatattggactctacgggaattta |
22366626 |
T |
|
| Q |
330 |
aataagtttcctgagtggatctcaaaactccaaaatcttgttaagctggatttgccacgtttga---aggaagtgaatgatgcaatgaaattactccaac |
426 |
Q |
| |
|
|| ||||||||||||||||| |||||||| ||| |||||| | || | || || | || |||||| ||| ||||||||||||||||||||| |
|
|
| T |
22366625 |
aagaagtttcctgagtggattccaaaactcacaaaccttgttgacatgaaggtgagacttacgaaggaggaagggaacgatgcaatgaaattactccaaa |
22366526 |
T |
|
| Q |
427 |
ttatgccaaacttgctgtccctccatatctctg |
459 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |
|
|
| T |
22366525 |
gtatgccaaacttgttgtccctccatatctctg |
22366493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 30 - 448
Target Start/End: Complemental strand, 22634459 - 22634041
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactctaagtagagtacgcttagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagagc |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | || ||||| |||| |||||||||| |||||||||| || |||||| |||| ||||| |
|
|
| T |
22634459 |
ggtattggaggcatgacatccctacaaactctaaatgaggtttatttagacgatgatgaagatgaagatgataatagagtggtagagttaatagaagagc |
22634360 |
T |
|
| Q |
130 |
taggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataagatgcaacaactaga |
229 |
Q |
| |
|
|||||||| ||| || ||||||||||| ||||||| | |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | || |
|
|
| T |
22634359 |
taggaaagctaaagcagcttagggaattaagcttggtcggtgttaggagtaaatatatgagtgctatatcttcctcaatcaacaagatgcaacaattgga |
22634260 |
T |
|
| Q |
230 |
gaaattaaatatttttggaatcaaattagacattttcattgatctggatttgaattcacccccacctaggcttgaacgtgttaaactctttggatattta |
329 |
Q |
| |
|
|||| |||||||| ||||||| || ||| ||||||||| |||||||||||||||||||||| | |||| ||||||||||||| | || |||||| |
|
|
| T |
22634259 |
gaaactaaatattagaggaatcagatataacacattcattgatatggatttgaattcacccccaccaaagcttcaacgtgttaaacttatagggtattta |
22634160 |
T |
|
| Q |
330 |
aataagtttcctgagtggatctcaaaactccaaaatcttgttaagctggatttgccacgtttgaaggaagtgaatgatgcaatgaaattactccaactta |
429 |
Q |
| |
|
|| || ||||||||||| |||||||||||| |||| |||||| || | || | | |||||||| |||||||||||||||||||||| || || |
|
|
| T |
22634159 |
ttgaaattgcctgagtggatttcaaaactccaatatctcgttaagttgaaggtgacgattacgaaggaagggaatgatgcaatgaaattactcaaaagta |
22634060 |
T |
|
| Q |
430 |
tgccaaacttgctgtccct |
448 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
22634059 |
tgccaaacttgttgtccct |
22634041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 30 - 440
Target Start/End: Complemental strand, 22466949 - 22466548
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactctaagtagagtacgcttagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagagc |
129 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
22466949 |
ggtattggaggcatgacatctctacaaactctaagtgaagtttatttagatgagaatgaagatgaaaatgataatagagtagtagagctaattcaagagc |
22466850 |
T |
|
| Q |
130 |
taggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataagatgcaacaactaga |
229 |
Q |
| |
|
|||||||| ||| | | || ||||| ||||| | | |||||| |||||||||||||||||||||||||||||||||||| | ||||||||| | || |
|
|
| T |
22466849 |
taggaaagctaaataagataagaaaattgagcttgataggtgttaggagtaaatatatgagtgctatatcttcctcaatcaatcaaatgcaacaaatgga |
22466750 |
T |
|
| Q |
230 |
gaaattaaatatttttggaatcaaattagacattttcattgatctggatttgaattcacccccacctaggcttgaacgtgttaaactctttggatattta |
329 |
Q |
| |
|
|||| || ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||| | ||||| |
|
|
| T |
22466749 |
gaaactacttatcggaggaatctcatt---------cattggtctggatttgaattcacccccacctaggcttcaacgtgttaaacttgactggcattta |
22466659 |
T |
|
| Q |
330 |
aataagtttcctgagtggatctcaaaactccaaaatcttgttaagctggatttgccacgtttgaaggaagtgaatgatgcaatgaaattactccaactta |
429 |
Q |
| |
|
| ||||| ||||||||||| ||||||||| ||||||||||| |||| | || || | |||||||| ||||||||||||||||||||||||| || |
|
|
| T |
22466658 |
agaaagttacctgagtggatttcaaaactcaaaaatcttgttgagctcaaggtgacagttaggaaggaagggaatgatgcaatgaaattactccaaagta |
22466559 |
T |
|
| Q |
430 |
tgccaaacttg |
440 |
Q |
| |
|
||||||||||| |
|
|
| T |
22466558 |
tgccaaacttg |
22466548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 30 - 449
Target Start/End: Complemental strand, 22356991 - 22356557
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactctaagtagagtacgcttagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagagc |
129 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||| || ||||||||| ||||||||||||||||||||| || |||||| |||| ||||| |
|
|
| T |
22356991 |
ggtattggaggcatgacatcgctacaaactctaaatagtgtttatttagatgattatgaagatgaaaatgataatagagttgtagagttaatagaagagc |
22356892 |
T |
|
| Q |
130 |
taggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataagatgcaacaactaga |
229 |
Q |
| |
|
| ||||| ||| || |||||||||||| ||||| | | ||| |||||||||||||||| ||||||||||||||||||| |||||||| || | || |
|
|
| T |
22356891 |
tgggaaaactaaagcagcttagggaattgagcttgagcggtcttaagagtaaatatatgagtggtatatcttcctcaatcaatgagatgcaaaaattgga |
22356792 |
T |
|
| Q |
230 |
gaaattaaatatt------tttggaatc-aaattagacat-----tttcattgatctggatttgaattcacccccacctaggcttgaacgtgttaaactc |
317 |
Q |
| |
|
|||| ||| |||| | |||||| ||| || || ||||||||||| |||||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
22356791 |
gaaactaagtattaaaggagtcggaatcggaatgggatatggcgcattcattgatcttgatttgaattcacccccacctatgcttcaacgtgttaaact- |
22356693 |
T |
|
| Q |
318 |
tttgga----tatttaaataagtttcctgagtggatctcaaaactccaaaatcttgttaagctggatttgccacgtttgaaggaagtgaatgatgcaatg |
413 |
Q |
| |
|
| || | ||||||||||| ||||||||||| |||||||||||||||||||| |||||| || | | | || ||||||||||||||||||| |
|
|
| T |
22356692 |
tcaagaccttaaattaaataagttgcctgagtggatttcaaaactccaaaatcttgtcaagctgaatgtaagccttacgagggaagtgaatgatgcaatg |
22356593 |
T |
|
| Q |
414 |
aaattactccaacttatgccaaacttgctgtccctc |
449 |
Q |
| |
|
|||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
22356592 |
aaattactccaaagtatgccaaatttgttgtccctc |
22356557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 30 - 302
Target Start/End: Complemental strand, 22352812 - 22352539
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaa-ctctaagtagagtacgcttagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagag |
128 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| || |||||||| || |||||||||||||| | ||| || ||||||||||| |||| |
|
|
| T |
22352812 |
ggtattggaggcatgacatccctacaaaactctaagtgatgtttatttagatgaaggagaagatgaaaatgacagtagagttgtagagctaattgaagag |
22352713 |
T |
|
| Q |
129 |
ctaggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataagatgcaacaactag |
228 |
Q |
| |
|
||||||||| ||| || || ||||| |||| |||| | |||||| |||||||||||||||||| ||||||||||||||||| |||||||| || | | |
|
|
| T |
22352712 |
ctaggaaagctaaatcagctaagggagttggtcttgtacggtgttaggagtaaatatatgagtgctctatcttcctcaatcaatcagatgcaaaaattgg |
22352613 |
T |
|
| Q |
229 |
agaaattaaatatttttggaatcaaattagacattttcattgatctggatttgaattcacccccacctaggctt |
302 |
Q |
| |
|
||||| || ||||| ||||| || ||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22352612 |
agaaactatatattattggagtcgtgccttacacattcattgatctggatttgaattcacccccacctaagctt |
22352539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 30 - 187
Target Start/End: Complemental strand, 37929757 - 37929600
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactctaagtagagtacgcttagatgatggtgaagatgaaaatgataatagggtagtagagctaatcatagagc |
129 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| | |||| |||||||||| ||||||||||||||||||||| || |||||||||||| ||||| |
|
|
| T |
37929757 |
ggtattggaggcctgacatccctacaaactctaaatgaagtatatttagatgatgatgaagatgaaaatgataatagagttgtagagctaatccaagagc |
37929658 |
T |
|
| Q |
130 |
taggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatat |
187 |
Q |
| |
|
|||||||| ||| ||| || |||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
37929657 |
taggaaagctaaaacagctaagggaattgggcttggccggtgttaggagtaaatatat |
37929600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 22430121 - 22430002
Alignment:
| Q |
123 |
atagagctaggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataagatgcaac |
222 |
Q |
| |
|
||||||||||||||| ||| || || |||||||||||||||| | |||| | |||||||||||||||||| ||| ||||||||||||| ||||||| |
|
|
| T |
22430121 |
atagagctaggaaagctaaatcagctaagggaattgggcttggccggtgtttggagtaaatatatgagtgctttatgttcctcaatcaatcagatgcacg |
22430022 |
T |
|
| Q |
223 |
aactagagaaattaaatatt |
242 |
Q |
| |
|
|| | |||||| |||||||| |
|
|
| T |
22430021 |
aattggagaaactaaatatt |
22430002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 449
Target Start/End: Complemental strand, 22352535 - 22352419
Alignment:
| Q |
333 |
aagtttcctgagtggatctcaaaactccaaaatcttgttaagctggatttgccacgtttgaaggaagtgaatgatgcaatgaaattactccaacttatgc |
432 |
Q |
| |
|
||||| ||||||||||| ||||||||||| ||||||||||||||| | || | | |||| || ||||||||||||||||||||||||| ||||| |
|
|
| T |
22352535 |
aagttgcctgagtggatttcaaaactccagaatcttgttaagctgaaagtgaatcttccgaagccagagaatgatgcaatgaaattactccaaagtatgc |
22352436 |
T |
|
| Q |
433 |
caaacttgctgtccctc |
449 |
Q |
| |
|
|||| ||| |||||||| |
|
|
| T |
22352435 |
caaatttgttgtccctc |
22352419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 22430194 - 22430160
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactctaag |
64 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
22430194 |
ggtattggaggcatgacatccctacaaactctaag |
22430160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 221
Target Start/End: Complemental strand, 22457426 - 22457320
Alignment:
| Q |
115 |
agctaatcatagagctaggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataa |
214 |
Q |
| |
|
|||||||| |||||||||||| ||| || || |||||||||| |||| | | |||||| || ||| ||||||||||||||||||||||||||| | |
|
|
| T |
22457426 |
agctaatccaagagctaggaaaactaaagcacctaagggaattggtcttgatcggtgttaggagcggatacatgagtgctatatcttcctcaatcaatga |
22457327 |
T |
|
| Q |
215 |
gatgcaa |
221 |
Q |
| |
|
||||||| |
|
|
| T |
22457326 |
gatgcaa |
22457320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 221
Target Start/End: Complemental strand, 22480407 - 22480301
Alignment:
| Q |
115 |
agctaatcatagagctaggaaagttaacacaacttagggaattgggcttggttgttgttagtagtaaatatatgagtgctatatcttcctcaatcaataa |
214 |
Q |
| |
|
|||||||| |||||||||||| ||| || || |||||||||| |||| | | |||||| || ||| ||||||||||||||||||||||||||| | |
|
|
| T |
22480407 |
agctaatccaagagctaggaaaactaaagcacctaagggaattggtcttgatcggtgttaggagcggatacatgagtgctatatcttcctcaatcaatga |
22480308 |
T |
|
| Q |
215 |
gatgcaa |
221 |
Q |
| |
|
||||||| |
|
|
| T |
22480307 |
gatgcaa |
22480301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 22457499 - 22457467
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactcta |
62 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |
|
|
| T |
22457499 |
ggtatcggaggcatgacatccctacaaactcta |
22457467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 22480480 - 22480448
Alignment:
| Q |
30 |
ggtattggaggcatgacatccctacaaactcta |
62 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |
|
|
| T |
22480480 |
ggtatcggaggcatgacatccctacaaactcta |
22480448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 2061 times since January 2019
Visitors: 2396