View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0243_low_90 (Length: 251)
Name: NF0243_low_90
Description: NF0243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0243_low_90 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 9008028 - 9007797
Alignment:
| Q |
1 |
ctccaaatctgtcacagaatacctacacggtattaaggcactttcagatgaacttgctgtcatcaattcaccactagatgatattgatctagttatccac |
100 |
Q |
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|
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| T |
9008028 |
ctccaaatctgtcacagaatacctacacggtattaaggcactttcagatgaacttgctgtcatcaattcaccactagatgatattgatctagttatccac |
9007929 |
T |
|
| Q |
101 |
tcactcaacggccttggtccggagtacaaagaaatatccgctgctcttcgtgctcgtgagaatcctattggatttgaagaacttcatgatctactacaag |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9007928 |
tcactcaacggccttggtccggagtacaaagaaatatccgctgctcttcgtgctcgtgagaatcctattggatttgaagaacttcatgatctactacaag |
9007829 |
T |
|
| Q |
201 |
attatgaaacccacctcactcgtgatgatgtc |
232 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |
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| T |
9007828 |
attatgaaacccacctcactcgcgatgatgtc |
9007797 |
T |
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