View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0243_low_96 (Length: 245)
Name: NF0243_low_96
Description: NF0243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0243_low_96 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 43 - 232
Target Start/End: Complemental strand, 10191768 - 10191579
Alignment:
| Q |
43 |
acatcatcacctctatgttcatcttcaacacctacaacactttcacctgtccttctaacacactcatcaatttcaccttcaatgtagctatattctacat |
142 |
Q |
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| T |
10191768 |
acatcatcacctttatgttcatcttcaacacctacaacactttcacctgtccttctaacacactcatcaatttcaccttcaatgtagctatattctagat |
10191669 |
T |
|
| Q |
143 |
acacatgactacaatcacctaagtctaatacaattcttctttcttcaccacctcttatctctccaatgcttactactcttccatctctgc |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| |
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| T |
10191668 |
acacatgactacaatcacctaagtctaatacaattcttctttcttctccacctcttatctctccaattcttactactcttccatttctgc |
10191579 |
T |
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