View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0245_low_5 (Length: 271)
Name: NF0245_low_5
Description: NF0245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0245_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 49 - 246
Target Start/End: Complemental strand, 46797766 - 46797569
Alignment:
| Q |
49 |
agttggtatatttgcggttgagttttatacagaggagacaggtaagcagctattacagcctctcacctaccttttacactctttgtacggtttcaaactt |
148 |
Q |
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| T |
46797766 |
agttggtatatttgcggttgagttttatacagaggagacaggtaagcagctattacagcctctcacctaccttttacactctttgtacggtttcaaactt |
46797667 |
T |
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| Q |
149 |
cattttctttcggataaaaaccttcatagctagatccataaggatagggttttcaactttttcaggtgtatataactactacaatttcctttgctact |
246 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
46797666 |
cattttctttcggataaaaaccctcatagctagatccataaggatagggttttcaactttttcaggtgtatataactactacaatttcctttgttact |
46797569 |
T |
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