View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0245_low_6 (Length: 245)

Name: NF0245_low_6
Description: NF0245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0245_low_6
NF0245_low_6
[»] chr1 (14 HSPs)
chr1 (3-166)||(41394366-41394529)
chr1 (1-166)||(20913172-20913337)
chr1 (1-166)||(20931487-20931652)
chr1 (24-166)||(37844404-37844548)
chr1 (4-166)||(20445824-20445989)
chr1 (3-166)||(20893581-20893745)
chr1 (4-166)||(20531589-20531753)
chr1 (1-85)||(18601143-18601227)
chr1 (1-110)||(5072388-5072497)
chr1 (3-85)||(2116399-2116481)
chr1 (3-85)||(45051567-45051649)
chr1 (1-122)||(51452634-51452755)
chr1 (1-72)||(22227951-22228022)
chr1 (1-72)||(22232648-22232719)
[»] scaffold0023 (2 HSPs)
scaffold0023 (3-166)||(48742-48905)
scaffold0023 (1-85)||(36236-36320)
[»] chr8 (20 HSPs)
chr8 (3-166)||(16193672-16193835)
chr8 (3-166)||(24928746-24928910)
chr8 (3-166)||(43373422-43373587)
chr8 (3-157)||(16404938-16405094)
chr8 (1-110)||(30120865-30120974)
chr8 (1-110)||(16674392-16674501)
chr8 (3-110)||(6774258-6774365)
chr8 (3-110)||(24549126-24549233)
chr8 (1-122)||(5238229-5238350)
chr8 (1-122)||(22907214-22907335)
chr8 (1-122)||(24661248-24661369)
chr8 (1-122)||(43685688-43685809)
chr8 (1-122)||(17345711-17345832)
chr8 (1-85)||(21844597-21844681)
chr8 (1-85)||(21851990-21852074)
chr8 (1-48)||(222753-222800)
chr8 (1-48)||(691908-691955)
chr8 (1-48)||(736376-736423)
chr8 (1-48)||(860271-860318)
chr8 (65-105)||(38533855-38533895)
[»] scaffold0266 (2 HSPs)
scaffold0266 (3-166)||(3538-3701)
scaffold0266 (3-166)||(1268-1432)
[»] chr4 (15 HSPs)
chr4 (3-166)||(122033-122196)
chr4 (3-166)||(13246574-13246739)
chr4 (3-166)||(54118198-54118363)
chr4 (1-110)||(47357797-47357906)
chr4 (10-166)||(15675042-15675201)
chr4 (10-149)||(10104221-10104362)
chr4 (1-122)||(26680342-26680463)
chr4 (1-122)||(10488704-10488825)
chr4 (1-122)||(16327926-16328047)
chr4 (1-85)||(10644362-10644446)
chr4 (1-122)||(13048221-13048342)
chr4 (59-166)||(33240900-33241010)
chr4 (25-95)||(31115795-31115865)
chr4 (24-106)||(40885570-40885652)
chr4 (24-105)||(15044992-15045074)
[»] chr2 (17 HSPs)
chr2 (3-166)||(462882-463045)
chr2 (6-166)||(20627268-20627429)
chr2 (3-166)||(8891386-8891551)
chr2 (3-166)||(36982394-36982560)
chr2 (1-110)||(19886661-19886770)
chr2 (3-166)||(43642911-43643076)
chr2 (3-166)||(19794659-19794823)
chr2 (10-122)||(25265390-25265502)
chr2 (1-122)||(19689401-19689522)
chr2 (1-122)||(23820213-23820334)
chr2 (10-166)||(24341342-24341501)
chr2 (1-122)||(14906440-14906561)
chr2 (1-122)||(17396653-17396773)
chr2 (1-122)||(20015153-20015274)
chr2 (1-72)||(7507894-7507965)
chr2 (100-166)||(22863169-22863237)
chr2 (24-105)||(68156-68238)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-166)||(51138-51301)
[»] scaffold0106 (1 HSPs)
scaffold0106 (6-166)||(41876-42036)
[»] chr3 (23 HSPs)
chr3 (3-166)||(13839038-13839202)
chr3 (3-166)||(12030103-12030266)
chr3 (1-166)||(16744071-16744236)
chr3 (1-166)||(14842517-14842682)
chr3 (6-166)||(2049957-2050117)
chr3 (3-132)||(51158008-51158137)
chr3 (3-159)||(15858986-15859143)
chr3 (1-110)||(55316362-55316471)
chr3 (1-110)||(41270218-41270327)
chr3 (1-122)||(17912483-17912603)
chr3 (3-115)||(15936634-15936746)
chr3 (1-122)||(2449238-2449359)
chr3 (59-166)||(19231981-19232091)
chr3 (3-85)||(15614978-15615060)
chr3 (76-166)||(19260779-19260869)
chr3 (1-122)||(13975722-13975842)
chr3 (1-122)||(45860948-45861068)
chr3 (3-115)||(15938476-15938588)
chr3 (5-85)||(16821286-16821366)
chr3 (1-122)||(13954890-13955010)
chr3 (22-106)||(4145814-4145898)
chr3 (26-115)||(11986173-11986262)
chr3 (65-106)||(14080715-14080756)
[»] scaffold0413 (1 HSPs)
scaffold0413 (3-157)||(6029-6183)
[»] scaffold0175 (1 HSPs)
scaffold0175 (3-152)||(926-1075)
[»] chr5 (22 HSPs)
chr5 (3-160)||(23507109-23507266)
chr5 (3-166)||(27182501-27182666)
chr5 (1-110)||(19500042-19500151)
chr5 (1-110)||(22366481-22366590)
chr5 (1-110)||(25426771-25426880)
chr5 (1-85)||(18778017-18778101)
chr5 (1-110)||(12517-12626)
chr5 (1-110)||(21073595-21073704)
chr5 (1-85)||(4200010-4200094)
chr5 (1-85)||(43443420-43443504)
chr5 (10-166)||(18531021-18531179)
chr5 (10-166)||(22053786-22053945)
chr5 (3-110)||(29188284-29188391)
chr5 (1-122)||(20623111-20623232)
chr5 (1-122)||(21233528-21233649)
chr5 (1-122)||(34939419-34939540)
chr5 (26-122)||(37052911-37053007)
chr5 (1-120)||(25900408-25900527)
chr5 (1-122)||(16536339-16536460)
chr5 (1-85)||(27009984-27010068)
chr5 (22-106)||(29918127-29918212)
chr5 (26-115)||(32950862-32950951)
[»] scaffold0001 (2 HSPs)
scaffold0001 (3-166)||(172049-172212)
scaffold0001 (3-166)||(177752-177915)
[»] chr7 (20 HSPs)
chr7 (3-166)||(16211910-16212073)
chr7 (6-166)||(3060113-3060273)
chr7 (3-166)||(13036968-13037133)
chr7 (3-166)||(36052808-36052973)
chr7 (1-110)||(10989552-10989661)
chr7 (3-166)||(11580691-11580858)
chr7 (1-85)||(2437600-2437684)
chr7 (1-85)||(13911049-13911133)
chr7 (3-122)||(47481031-47481150)
chr7 (3-115)||(18253842-18253954)
chr7 (26-121)||(13321183-13321278)
chr7 (3-85)||(16478987-16479069)
chr7 (1-122)||(11516369-11516490)
chr7 (1-122)||(15441564-15441685)
chr7 (1-122)||(30262129-30262250)
chr7 (1-122)||(7293158-7293279)
chr7 (5-122)||(25292338-25292455)
chr7 (1-85)||(13572819-13572903)
chr7 (1-150)||(295936-296087)
chr7 (24-105)||(13377693-13377775)
[»] scaffold0195 (2 HSPs)
scaffold0195 (3-158)||(19350-19507)
scaffold0195 (3-122)||(21434-21553)
[»] chr6 (13 HSPs)
chr6 (3-166)||(23153591-23153756)
chr6 (1-110)||(25175706-25175815)
chr6 (1-152)||(14626088-14626239)
chr6 (1-110)||(27653983-27654092)
chr6 (1-110)||(16825752-16825863)
chr6 (10-122)||(35009439-35009551)
chr6 (1-122)||(1657748-1657869)
chr6 (24-122)||(15862636-15862734)
chr6 (3-110)||(1650105-1650212)
chr6 (127-166)||(23148266-23148305)
chr6 (37-122)||(27751603-27751688)
chr6 (26-122)||(29666041-29666137)
chr6 (22-106)||(29605612-29605696)
[»] scaffold0218 (1 HSPs)
scaffold0218 (3-162)||(5020-5180)
[»] scaffold0077 (1 HSPs)
scaffold0077 (3-166)||(36867-37032)
[»] scaffold0028 (2 HSPs)
scaffold0028 (3-166)||(89408-89573)
scaffold0028 (71-166)||(107738-107835)
[»] scaffold0008 (2 HSPs)
scaffold0008 (24-166)||(128125-128267)
scaffold0008 (1-85)||(31700-31784)
[»] scaffold0162 (2 HSPs)
scaffold0162 (3-162)||(26374-26534)
scaffold0162 (10-122)||(8180-8292)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-166)||(272169-272332)
[»] scaffold0012 (1 HSPs)
scaffold0012 (3-166)||(247396-247561)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-158)||(123126-123283)
[»] scaffold1711 (1 HSPs)
scaffold1711 (1-110)||(1304-1413)
[»] scaffold0498 (1 HSPs)
scaffold0498 (3-166)||(9022-9185)
[»] scaffold0302 (1 HSPs)
scaffold0302 (3-148)||(12257-12403)
[»] scaffold0025 (3 HSPs)
scaffold0025 (3-148)||(148865-149012)
scaffold0025 (10-166)||(9000-9159)
scaffold0025 (101-166)||(146843-146908)
[»] scaffold0772 (1 HSPs)
scaffold0772 (4-115)||(5674-5785)
[»] scaffold0132 (1 HSPs)
scaffold0132 (10-122)||(13657-13769)
[»] scaffold0049 (1 HSPs)
scaffold0049 (3-115)||(48331-48443)
[»] scaffold0026 (3 HSPs)
scaffold0026 (3-115)||(107891-108003)
scaffold0026 (1-54)||(64584-64637)
scaffold0026 (65-107)||(89863-89905)
[»] scaffold1542 (1 HSPs)
scaffold1542 (3-122)||(534-653)
[»] scaffold0125 (1 HSPs)
scaffold0125 (10-122)||(41799-41911)
[»] scaffold0420 (1 HSPs)
scaffold0420 (3-85)||(13350-13432)
[»] scaffold0215 (2 HSPs)
scaffold0215 (3-85)||(9374-9456)
scaffold0215 (3-85)||(16272-16354)
[»] scaffold0075 (1 HSPs)
scaffold0075 (24-122)||(34460-34558)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-122)||(26937-27058)
scaffold0141 (1-115)||(22682-22796)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-122)||(1582-1703)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-122)||(37066-37187)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-85)||(178-262)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-85)||(43140-43224)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-72)||(5254-5325)
[»] scaffold0529 (1 HSPs)
scaffold0529 (10-111)||(3114-3215)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-85)||(14086-14170)
scaffold0139 (1-85)||(21141-21225)
[»] scaffold0361 (1 HSPs)
scaffold0361 (29-122)||(3360-3453)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-72)||(3864-3936)
[»] scaffold0084 (1 HSPs)
scaffold0084 (26-115)||(56106-56195)
[»] scaffold0058 (1 HSPs)
scaffold0058 (65-106)||(70307-70348)
[»] scaffold0123 (1 HSPs)
scaffold0123 (24-106)||(8174-8257)
[»] scaffold0243 (1 HSPs)
scaffold0243 (24-105)||(2317-2399)
[»] scaffold0066 (1 HSPs)
scaffold0066 (26-72)||(45198-45244)


Alignment Details
Target: chr1 (Bit Score: 124; Significance: 7e-64; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 41394366 - 41394529
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||| |||||| || |||||||| ||||||||||||||| || ||||||||||| ||||    
T  41394366 aacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcatagttggagcacga 41394465  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394466 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 41394529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 20913172 - 20913337
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || || |||||||| ||    
T  20913172 ataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 20913271  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||| ||||    
T  20913272 gaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatg 20913337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 20931487 - 20931652
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || || |||||||| ||    
T  20931487 ataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcac 20931586  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||| ||||    
T  20931587 gaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatg 20931652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 37844548 - 37844404
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatccata 123  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || ||||||||||| | ||||||||||||||| ||||||     
T  37844548 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccatt 37844449  T
Q  124 at--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||   ||||||||||||||||||||||||| ||||||||||||||    
T  37844448 atgcaaaaattcatacaacatttgaaaattcacaaaatgatgatg 37844404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 20445824 - 20445989
Alignment:
Q  4 acttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaa 103  Q
    ||||||||||| | | ||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || | |||||| |||||    
T  20445824 acttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaa 20445923  T
Q  104 tttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-acaaaatgatgatg 166  Q
    |||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||||||||||||    
T  20445924 tttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaaaatgatgatg 20445989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 20893745 - 20893581
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||| || || |||||||| | ||    
T  20893745 aacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcaaga 20893646  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||| ||||||||||||||||    
T  20893645 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaaaatgatgatg 20893581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 20531589 - 20531753
Alignment:
Q  4 acttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaa 103  Q
    ||||||||||| | | ||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||  | || | |||||| |||||    
T  20531589 acttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaa 20531688  T
Q  104 tttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||||||||||||    
T  20531689 tttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatg 20531753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18601227 - 18601143
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18601227 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataaca 18601143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5072497 - 5072388
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||   ||| ||    
T  5072497 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagcaagagcac 5072398  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  5072397 gaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 2116399 - 2116481
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  2116399 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataaca 2116481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 45051567 - 45051649
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||    
T  45051567 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaaca 45051649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 51452634 - 51452755
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || ||||| || ||    
T  51452634 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgaagcac 51452733  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  51452734 gaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22227951 - 22228022
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 72  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||| |||||| || ||||||||||||||    
T  22227951 ataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22228022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22232648 - 22232719
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 72  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||| |||||| || ||||||||||||||    
T  22232648 ataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 48742 - 48905
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  48742 aacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 48841  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48842 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatg 48905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 36236 - 36320
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  36236 ataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataaca 36320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 16193835 - 16193672
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||| |||||| || |||||||||||||||||||||||| || ||||||||||| ||||    
T  16193835 aacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcacga 16193736  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  16193735 atttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaatgatgatg 16193672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 24928910 - 24928746
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||  | || |||||||| ||||    
T  24928910 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcacagttggagcacga 24928811  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatg 166  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  24928810 atttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatg 24928746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 43373587 - 43373422
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| ||| || || ||||||||||||||||||||| || || || |||||||| ||||    
T  43373587 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagcacga 43373488  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||  ||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||    
T  43373487 atttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatg 43373422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 16405094 - 16404938
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||| ||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  16405094 aacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 16404995  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaa 157  Q
    ||||||||| ||| |||||| ||   |||||||||||||||||||||||||||||||    
T  16404994 atttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttacaaa 16404938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30120865 - 30120974
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || ||   ||| ||    
T  30120865 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagcaagagcac 30120964  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  30120965 gaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16674501 - 16674392
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| || ||   ||| ||    
T  16674501 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcacagaaagagcac 16674402  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  16674401 gaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 6774365 - 6774258
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||  ||| ||||    
T  6774365 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacga 6774266  T
Q  103 atttagca 110  Q
    || |||||    
T  6774265 atctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 24549126 - 24549233
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||  ||| ||||    
T  24549126 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacga 24549225  T
Q  103 atttagca 110  Q
    || |||||    
T  24549226 atctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 5238229 - 5238350
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  5238229 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 5238328  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  5238329 gaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 22907335 - 22907214
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  22907335 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 22907236  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  22907235 gaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 24661369 - 24661248
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  24661369 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 24661270  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  24661269 gaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 43685688 - 43685809
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  43685688 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 43685787  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  43685788 gaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 17345711 - 17345832
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||  ||||||| ||||  ||||||||| |||||||||||||| |||||| || |||||||||||||||| |||||||||| || |||| ||| ||    
T  17345711 ataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcacagttagagcac 17345810  T
Q  101 gaatttagcaacaatcatccat 122  Q
    |||||| |||||||| ||||||    
T  17345811 gaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21844681 - 21844597
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||| ||||||  | |||||||||||||||||||||||||||    
T  21844681 ataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataaca 21844597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21852074 - 21851990
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||||| ||||| | ||||| |||||||||||||||| ||||||  | |||||||||||||||||||||||||||    
T  21852074 ataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataaca 21851990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 222800 - 222753
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  222800 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 222753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 691955 - 691908
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  691955 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 691908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 736423 - 736376
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  736423 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 736376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 860318 - 860271
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  860318 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatt 860271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 38533855 - 38533895
Alignment:
Q  65 ttcatgcatacaaacataacaacatagttggagtacgaatt 105  Q
    ||||||||| ||||||||||| |||| ||||||||||||||    
T  38533855 ttcatgcattcaaacataacatcataattggagtacgaatt 38533895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 3701 - 3538
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  3701 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 3602  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||    
T  3601 atttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatg 3538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 1268 - 1432
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| ||  |||||||||||||||| |||||| || || |||||||| ||||    
T  1268 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagttggagcacga 1367  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatg 166  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  1368 atttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaatgatgatg 1432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 122033 - 122196
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || || |||||||| || |    
T  122033 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaa 122132  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  122133 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatg 122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 13246574 - 13246739
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || ||| |||||||||||||||||||| || || ||||| || ||||    
T  13246574 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagttgtagcacga 13246673  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  13246674 atttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 13246739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 54118363 - 54118198
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    ||||||||| || | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || | |||||| ||||    
T  54118363 aacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacga 54118264  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||||| ||||||    
T  54118263 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatg 54118198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47357797 - 47357906
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||   ||| ||    
T  47357797 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcacagcaagagcac 47357896  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  47357897 gaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 15675201 - 15675042
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| |||||||||||    
T  15675201 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagc 15675102  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttgaaaatttac-aaaatgatgatg 166  Q
    |||||| |||||  ||   ||||||||||| ||||||||||| || | ||||||||||||    
T  15675101 aacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatg 15675042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 10104362 - 10104221
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||| |||||||    
T  10104362 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagc 10104263  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttgaaaa 149  Q
    |||||| |||||  ||   ||||||||||| |||||||||||    
T  10104262 aacaattatccaattatgaaaaattcataccacatttgaaaa 10104221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26680342 - 26680463
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  26680342 ataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 26680441  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  26680442 gaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10488704 - 10488825
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  10488704 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 10488803  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  10488804 gaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 16328047 - 16327926
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  16328047 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 16327948  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  16327947 gaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10644362 - 10644446
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||| ||||||| ||||| ||||||||||||||||| |||||| |||||| || |||||||||||||||||||||||||||    
T  10644362 ataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataaca 10644446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13048342 - 13048221
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||| ||||| ||||| | |||||||||||||||||||||| ||||||  | |||||| ||||||||||||||||| ||    |||||||| |     
T  13048342 ataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattgaagttggagcat 13048243  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  13048242 gaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 33240900 - 33241010
Alignment:
Q  59 catcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttac-a 155  Q
    |||||||||||||||||||||||| || || |||||||| ||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || | |    
T  33240900 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaa 33240999  T
Q  156 aaatgatgatg 166  Q
    |||||||||||    
T  33241000 aaatgatgatg 33241010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 31115795 - 31115865
Alignment:
Q  25 gaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttgg 95  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || ||||||    
T  31115795 gaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 40885652 - 40885570
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaattt 106  Q
    |||||||||||||||||||||||  || ||| || || ||||||||||||||||||||| || || |||||||||||||||||    
T  40885652 tgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 15044992 - 15045074
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagtacgaatt 105  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| |||||| |||||||    
T  15044992 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 15045074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 462882 - 463045
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||| ||| || || |||||||| ||||    
T  462882 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacga 462981  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  462982 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatg 463045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 20627429 - 20627268
Alignment:
Q  6 ttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatt 105  Q
    ||||||||||| ||||| || ||||||||||||||||||||| |||||| || ||||||||| |||||||||||||| || || |||||||| |||||||    
T  20627429 ttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatt 20627330  T
Q  106 tagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaaatgatgatg 166  Q
    || ||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  20627329 taacaacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatg 20627268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 8891386 - 8891551
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| ||||||||||||||| |||||||| |||||| || ||||||||||||||||||||||||  | || |||||||| ||||    
T  8891386 aacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacga 8891485  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  8891486 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 8891551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 36982560 - 36982394
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||  ||||| || |||||||||||| ||||||||||| || || |||||||| ||||    
T  36982560 aacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagttggagcacga 36982461  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatg 166  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||||||||||    
T  36982460 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatg 36982394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19886770 - 19886661
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||   ||| ||    
T  19886770 ataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 19886671  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  19886670 gaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 43643076 - 43642911
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||| ||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || | |||||| || |    
T  43643076 aacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaa 43642977  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||  ||   ||||||||||||||||||||||||| ||||||||||||||    
T  43642976 atttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatg 43642911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 19794823 - 19794659
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||||    
T  19794823 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagttggagcacga 19794724  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||| | ||||| |||||| ||   ||||||||||||||||||| ||||||||||||| ||||||    
T  19794723 atttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatttacaaaataatgatg 19794659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 25265502 - 25265390
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||| ||| |||||||||||    
T  25265502 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagc 25265403  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  25265402 aacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 19689522 - 19689401
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  19689522 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 19689423  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  19689422 gaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 23820213 - 23820334
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  23820213 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 23820312  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  23820313 gaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 24341501 - 24341342
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  ||||||| |||||||||||||||| |||||| || |||||||||||||||||||||||| || || ||||| || | |||||||||    
T  24341501 catttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagc 24341402  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttgaaaatttac-aaaatgatgatg 166  Q
    |||||| |||||  ||   ||||||||||| ||||||||||| || | ||||||||||||    
T  24341401 aacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatg 24341342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 14906561 - 14906440
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  14906561 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 14906462  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  14906461 gaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 17396773 - 17396653
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||| | ||| | |||||||||||||||||||||| ||||||  | || |||||||||||||| |||||| || || |||||||| ||    
T  17396773 ataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcac 17396675  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  17396674 gaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 20015153 - 20015274
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| | |||| ||  |||||||||||||| |||||||| || || |||||||| ||    
T  20015153 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaaagttggagcac 20015252  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  20015253 gaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7507965 - 7507894
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 72  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||    
T  7507965 ataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 22863169 - 22863237
Alignment:
Q  100 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatg 22863237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 68156 - 68238
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagtacgaatt 105  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| |||||| |||||||    
T  68156 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 68238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 51301 - 51138
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||| ||| || || |||||||| ||||    
T  51301 aacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacga 51202  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51201 atttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatg 51138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 41876 - 42036
Alignment:
Q  6 ttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatt 105  Q
    ||||||||||| ||||| ||| ||||||||||||||||||||   |||| || |||||||||||||||||||||||| || || |||||||| |||||||    
T  41876 ttatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatt 41975  T
Q  106 tagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41976 tagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatg 42036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 13839038 - 13839202
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| ||||||||||||||||||| |||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  13839038 aacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 13839137  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatg 166  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13839138 atttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatg 13839202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 12030266 - 12030103
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  12030266 aacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 12030167  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||| || ||||||||||||||    
T  12030166 atttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatg 12030103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 16744236 - 16744071
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||| ||||| | || ||||||||| ||||||||| |||||  ||  ||||||||||| ||||||||||| || || |||||||| ||    
T  16744236 ataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttggagcac 16744137  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16744136 gaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 16744071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 14842682 - 14842517
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||| || || |||||||| ||||||||||||||| |||||| || | |||||||||||||||||||||| || || |||||||| ||    
T  14842682 ataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagttggagcac 14842583  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||| ||||    
T  14842582 gaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatg 14842517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 2049957 - 2050117
Alignment:
Q  6 ttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatt 105  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||| ||||||||||||| |  || |||||||| |||||||    
T  2049957 ttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatt 2050056  T
Q  106 tagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||||    
T  2050057 tagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatg 2050117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 51158137 - 51158008
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  51158137 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 51158038  T
Q  103 atttagcaacaatcatccataatcaaaatt 132  Q
    ||||||||||||| |||||||| |||||||    
T  51158037 atttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 15859143 - 15858986
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  15859143 aacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 15859044  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaat 159  Q
    ||||||||||||| |||||| ||   ||||||||||||||| ||| |||||||||||||    
T  15859043 atttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 55316362 - 55316471
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||   ||| ||    
T  55316362 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 55316461  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  55316462 gaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41270218 - 41270327
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||   ||| ||    
T  41270218 ataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 41270317  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  41270318 gaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 17912603 - 17912483
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||| ||||| | |||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||    
T  17912603 ataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatca-agttggagcac 17912505  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  17912504 gaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 15936746 - 15936634
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| || || |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||  | |||||||| ||||    
T  15936746 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 15936647  T
Q  103 atttagcaacaat 115  Q
    |||||| ||||||    
T  15936646 atttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 2449359 - 2449238
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  2449359 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 2449260  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  2449259 gaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 19231981 - 19232091
Alignment:
Q  59 catcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-aca 155  Q
    |||||||||||| ||| ||||||| || || |||||||| ||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| |||    
T  19231981 catcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcaca 19232080  T
Q  156 aaatgatgatg 166  Q
    |||||||||||    
T  19232081 aaatgatgatg 19232091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 15614978 - 15615060
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||| ||||||    
T  15614978 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataaca 15615060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 166
Target Start/End: Complemental strand, 19260869 - 19260779
Alignment:
Q  76 aaacataacaacatagttggagtacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||| || |||| || ||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatg 19260779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13975842 - 13975722
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||| | ||| | ||||||||||| |||||||||| ||||||  | || |||||||||||||| |||||| || || |||||||| ||    
T  13975842 ataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcac 13975744  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  13975743 gaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 45860948 - 45861068
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||| | ||| | ||||||||||| |||||||||| ||||||  | || |||||||||||||| |||||| || || |||||||| ||    
T  45860948 ataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcac 45861046  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  45861047 gaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 15938588 - 15938476
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| || || |||||||||||||||||||||||| |||||| || ||||||||||||  |||||||||| ||  | |||||||| |||     
T  15938588 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggagcacgt 15938489  T
Q  103 atttagcaacaat 115  Q
    |||||| ||||||    
T  15938488 atttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 16821286 - 16821366
Alignment:
Q  5 cttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||| ||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||||||    
T  16821286 cttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataaca 16821366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13955010 - 13954890
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||| ||||||||| | ||| | ||||||||||| |||||||||| ||||||  | || |||||||||||||| |||||| || || |||||||| ||    
T  13955010 ataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggagcac 13954912  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  13954911 gaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 4145898 - 4145814
Alignment:
Q  22 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaattt 106  Q
    |||||||||||||||||| ||||||  || ||| || || ||||||||| || |||||||| || |||| |||||||||||||||    
T  4145898 tatgaacatgtaatttcatcaacaacaattcaattatcaccaattcatgtattcaaacatatcaccataattggagtacgaattt 4145814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 11986262 - 11986173
Alignment:
Q  26 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaat 115  Q
    |||||||||||||| | ||||| |||||| || ||| || ||||||| || || |||||| || |||| ||| ||||||||| |||||||    
T  11986262 aacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  65 ttcatgcatacaaacataacaacatagttggagtacgaattt 106  Q
    |||||||||||||||||| || ||||||||||| ||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 6183 - 6029
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  6183 aacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 6084  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaa 157  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||    
T  6083 atttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaa 6029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 1075 - 926
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  1075 aacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 976  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt 152  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  975 atttagcaacaattatccataatcacaattcatacaacatttgagaattt 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 23507109 - 23507266
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |  ||||| ||||    
T  23507109 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaaatggagcacga 23507208  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatg 160  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||    
T  23507209 atttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaatg 23507266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 27182666 - 27182501
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||||||||||| ||||||| |||||| || ||||| |||||||||||||||||| || || |||||||| | ||    
T  27182666 aacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagttggagcatga 27182567  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  27182566 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 27182501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19500042 - 19500151
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||   ||| ||    
T  19500042 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 19500141  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  19500142 gaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22366590 - 22366481
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||   ||| ||    
T  22366590 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 22366491  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  22366490 gaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25426771 - 25426880
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||   ||| ||    
T  25426771 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 25426870  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  25426871 gaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18778101 - 18778017
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18778101 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 18778017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12517 - 12626
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||   ||| ||    
T  12517 ataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 12616  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  12617 gaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21073704 - 21073595
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||   ||| ||    
T  21073704 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcacagcaagagcac 21073605  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  21073604 gaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4200094 - 4200010
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4200094 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataaca 4200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 43443504 - 43443420
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43443504 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataaca 43443420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 18531179 - 18531021
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| |||||||||||    
T  18531179 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagc 18531080  T
Q  110 aacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||| |||| || || ||| |||||||| ||||||||||| || |||||||||||||    
T  18531079 aacaattatccaattatgaaacattcataccacatttgaaaaattgcaaaatgatgatg 18531021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 22053945 - 22053786
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| || || |||||||| |||||||||||    
T  22053945 catttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagc 22053846  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttg-aaaatttacaaaatgatgatg 166  Q
    |||||| |||||  ||   ||||||||||| ||||||| |||||||  ||||||||||||    
T  22053845 aacaattatccaattatgaaaaattcataccacatttgaaaaatttcaaaaatgatgatg 22053786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 29188391 - 29188284
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||  ||| ||||    
T  29188391 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacga 29188292  T
Q  103 atttagca 110  Q
    || |||||    
T  29188291 atctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 20623111 - 20623232
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  20623111 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 20623210  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  20623211 gaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21233649 - 21233528
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  21233649 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 21233550  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  21233549 gaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 34939419 - 34939540
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||  ||||||| ||||  ||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||| ||| ||    
T  34939419 ataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcac 34939518  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||| | ||||||    
T  34939519 gaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 37052911 - 37053007
Alignment:
Q  26 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatccat 122  Q
    |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||||||||||||||||| ||||||    
T  37052911 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25900527 - 25900408
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   ||||| |||||| ||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||    
T  25900527 ataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaaagttggagcac 25900428  T
Q  101 gaatttagcaacaatcatcc 120  Q
    ||||||||||||||| ||||    
T  25900427 gaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16536339 - 16536460
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  || |||||||||||||||||||| || || |||||||| ||    
T  16536339 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaaagttggagcac 16536438  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  16536439 gaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 27009984 - 27010068
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||||| ||||| | |||||||||||||||||||| | ||||||  | |||||||||||||||||||||||||||    
T  27009984 ataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataaca 27010068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 29918127 - 29918212
Alignment:
Q  22 tatgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagtacgaattt 106  Q
    |||||||||| ||||||||||||||  || ||| || |||||| |||||| || |||||||| || |||| |||||| ||||||||    
T  29918127 tatgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 32950862 - 32950951
Alignment:
Q  26 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaat 115  Q
    |||||||||||||| | ||||| |||||| || |||||| |||| || || || |||||| || |||| ||| ||||||||| |||||||    
T  32950862 aacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 172049 - 172212
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| ||||||||||||||||||| |||| |||||| || ||||||||||| |||||||||||| || || |||||||| |||     
T  172049 aacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgt 172148  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  172149 atttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatg 172212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 177752 - 177915
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| ||||||||||||||||||| |||| |||||| || ||||||||||| |||||||||||| || || |||||||| |||     
T  177752 aacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgt 177851  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  177852 atttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatg 177915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 16211910 - 16212073
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||| |||||||| ||||||  ||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  16211910 aacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 16212009  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  16212010 atttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatg 16212073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 3060113 - 3060273
Alignment:
Q  6 ttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatt 105  Q
    ||||||||||| ||||| |||||||||||||||||||||| |  ||||| || |||||||| ||||||||||| |||  | || |||||||| |||||||    
T  3060113 ttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagttggagcacgaatt 3060212  T
Q  106 tagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3060213 tagcaacaattatccataagcaaaattcatataacatttgaaaatttacaaaatgatgatg 3060273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 13037133 - 13036968
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||| ||||||| ||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  13037133 aacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 13037034  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  13037033 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 13036968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 36052808 - 36052973
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||| ||| || || ||||||||||||||||||||| || || || ||||||||||  |    
T  36052808 aacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggagtataa 36052907  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||    
T  36052908 atttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatg 36052973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10989552 - 10989661
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||   ||| ||    
T  10989552 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 10989651  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  10989652 gaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 11580858 - 11580691
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||  | || |||||||| ||||    
T  11580858 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggagcacga 11580759  T
Q  103 atttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaatgatgatg 166  Q
    ||||||||| ||| |||||| ||    |||||||||||||||||||||||||||| ||||||||||||    
T  11580758 atttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatg 11580691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2437600 - 2437684
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2437600 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataaca 2437684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13911133 - 13911049
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  13911133 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataaca 13911049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 47481150 - 47481031
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||| || |||| ||| ||||    
T  47481150 aacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacga 47481051  T
Q  103 atttagcaacaatcatccat 122  Q
    ||||||||||||| ||||||    
T  47481050 atttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 18253954 - 18253842
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| || || |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||  | |||||||| ||||    
T  18253954 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 18253855  T
Q  103 atttagcaacaat 115  Q
    |||||| ||||||    
T  18253854 atttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 13321183 - 13321278
Alignment:
Q  26 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatcca 121  Q
    |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||| |||||    
T  13321183 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 16479069 - 16478987
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  16479069 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataaca 16478987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 11516369 - 11516490
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  11516369 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 11516468  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  11516469 gaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15441685 - 15441564
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  15441685 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 15441586  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  15441585 gaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 30262250 - 30262129
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  30262250 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 30262151  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  30262150 gaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7293158 - 7293279
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  || |||||||||||||||||||| || || |||||||| ||    
T  7293158 ataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaagttggagcac 7293257  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  7293258 gaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 25292455 - 25292338
Alignment:
Q  5 cttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaat 104  Q
    |||||| ||||| ||||| | |||||||||||||||||||||| ||||||  | || |||||||| |||||||||||| || || |||||||| || |||    
T  25292455 cttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaaagttggagcacaaat 25292356  T
Q  105 ttagcaacaatcatccat 122  Q
    ||||||||||| ||||||    
T  25292355 ttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13572819 - 13572903
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||| | ||||  | |||||||||||||||||||||||||||    
T  13572819 ataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataaca 13572903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 296087 - 295936
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||| ||||  | |||||| ||||||||||||||| |||  | || |||| ||||||||| |||||||||||| |  | || ||  ||    
T  296087 ataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaattagaacac 295988  T
Q  101 gaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaat 150  Q
    ||||||||||||||| || ||| || ||||| |||||||||  |||||||||    
T  295987 gaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaat 295936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 13377693 - 13377775
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagtacgaatt 105  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| |||||| |||||||    
T  13377693 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 13377775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 19350 - 19507
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  19350 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 19449  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaa 158  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||    
T  19450 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaa 19507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 21434 - 21553
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  21434 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 21533  T
Q  103 atttagcaacaatcatccat 122  Q
    ||||||||||||| ||||||    
T  21534 atttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 23153591 - 23153756
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  23153591 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 23153690  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||| |||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  23153691 atttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 23153756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25175706 - 25175815
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||| ||    
T  25175706 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacacagcaagagcac 25175805  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  25175806 gaatttagca 25175815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 14626239 - 14626088
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || ||   ||| ||    
T  14626239 ataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcac 14626140  T
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt 152  Q
    ||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||    
T  14626139 gaatttagcaataattatccataatcacaattcaaacaacatttgagaattt 14626088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27654092 - 27653983
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||   ||| ||    
T  27654092 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcacagcaagagcac 27653993  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  27653992 gaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16825863 - 16825752
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatta--tacaactaacatcaattcatgcatacaaacataacaacatagttggagt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || ||   |||     
T  16825863 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatcacagcaagagc 16825764  T
Q  99 acgaatttagca 110  Q
    ||||||||||||    
T  16825763 acgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 35009551 - 35009439
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||| || |||| ||| |||||||||||    
T  35009551 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagc 35009452  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  35009451 aacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 1657869 - 1657748
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    |||||||  ||||||| ||||  ||||||||| |||||||||||||| |||||| || ||||||||||||||| ||||||||||| || |||| ||| ||    
T  1657869 ataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagttagagcac 1657770  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  1657769 gaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 15862636 - 15862734
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatccat 122  Q
    ||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||| ||| |||||||||| |||||| ||||||    
T  15862636 tgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 1650212 - 1650105
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    ||||||||||| || ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||| || |||  ||| ||||    
T  1650212 aacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcacga 1650113  T
Q  103 atttagca 110  Q
    || |||||    
T  1650112 atctagca 1650105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 23148266 - 23148305
Alignment:
Q  127 aaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatg 23148305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 27751603 - 27751688
Alignment:
Q  37 tcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatccat 122  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||||| || | || ||| ||||||||||| ||| | ||||||    
T  27751603 tcaccaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 29666041 - 29666137
Alignment:
Q  26 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatccat 122  Q
    |||||||||||||||| ||||| |||||| || ||||||||||| ||||  || |||||| || || | ||| ||||||||| ||||||| ||||||    
T  29666041 aacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 29605612 - 29605696
Alignment:
Q  22 tatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaattt 106  Q
    |||||||||||||||||||||||||  || ||| || ||  ||||||||||| |||||||| || |||| || ||| ||||||||    
T  29605612 tatgaacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatcaccataattagagcacgaattt 29605696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 5180 - 5020
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||| |||||||||||||  ||||| || |||||||||| ||||||||||||| |  || |||||||||||||    
T  5180 aacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcacagttggagtacga 5081  T
Q  103 atttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgat 162  Q
    ||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||||    
T  5080 atttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaaatgat 5020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 37032 - 36867
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||||||||||||||||   ||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  37032 aacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 36933  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||    
T  36932 atttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaaaatgatgatg 36867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 89573 - 89408
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    ||||||| |||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||| ||| || || |||||||| ||||    
T  89573 aacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacga 89474  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||| ||   |||||||||| |||||||||||||||||||||||||||||    
T  89473 atttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatg 89408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 107835 - 107738
Alignment:
Q  71 catacaaacataacaacatagttggagtacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||| ||| || || |||||||| ||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 107738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 128267 - 128125
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatccata 123  Q
    ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || || ||||| || ||||||||||||||||| |||||||    
T  128267 tgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccata 128168  T
Q  124 atcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    | ||||||||||||||| ||||||||||| |||||||| ||||    
T  128167 agcaaaattcatacaacttttgaaaatttgcaaaatgaagatg 128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31784 - 31700
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  31784 ataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataaca 31700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 162
Target Start/End: Complemental strand, 26534 - 26374
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| |||||||||| ||||||||| |||  ||||| || |||||||||| ||||||||||||| || || |||||||| ||||    
T  26534 aacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaagttggagcacga 26435  T
Q  103 atttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgat 162  Q
    ||||||||||||| || ||| ||  ||||||||||||||||||||||||||||||||||||    
T  26434 atttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgat 26374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 8292 - 8180
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  ||||| |||||||||||||||||| |||||| || || |||||||||||||||||||||||| || |||| ||| |||||||||||    
T  8292 catttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcacagttagagcacgaatttagc 8193  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  8192 aacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 272169 - 272332
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| ||||||||||||||| ||| |||| |||||| || ||||||||||| |||||||||||| ||  | ||||||||||||     
T  272169 aacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagttggagtacgt 272268  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  272269 atttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatgatg 272332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 247561 - 247396
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||| |||||||||  |||| |||||| || |||||||||||||||||||||||| ||  | |||||||| ||||    
T  247561 aacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 247462  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||    
T  247461 atttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatg 247396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 123283 - 123126
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || | |||||| ||||    
T  123283 aacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacga 123184  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaa 158  Q
    ||||||||||||| |||||| ||   ||||||||||||||||||| ||||||||||||    
T  123183 atttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaa 123126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1413 - 1304
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||   ||| ||    
T  1413 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcac 1314  T
Q  101 gaatttagca 110  Q
    ||||||||||    
T  1313 gaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 9022 - 9185
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||| ||||||| ||||  ||||||||||||||||||||||||  ||||| || |||| |||||||||||||||||||||| || |  ||||| ||||    
T  9022 aacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcacaaatggagcacga 9121  T
Q  103 atttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||||||||  ||||||| |||||||| |||||| ||||||||||| |||||||| ||||    
T  9122 atttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatg 9185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 12257 - 12403
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| || || | |||||||| ||||||||||||| |||||| || |||||||||||||||||||||||| || || |||| ||| ||||    
T  12257 aacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttagagcacga 12356  T
Q  103 atttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaa 148  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||    
T  12357 atttagcaacaattatccataatcaaaatttcatacagcatttgaaa 12403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 148865 - 149012
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||| || || |||||||| || |    
T  148865 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaa 148964  T
Q  103 atttagcaacaatcatccataat--caaaattcatacaacatttgaaa 148  Q
    ||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148965 atttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 9000 - 9159
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || || ||||| |||||||||||    
T  9000 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagc 9099  T
Q  110 aacaatcatcca--taatcaaaattcatacaacatttgaaaatttac-aaaatgatgatg 166  Q
    |||||| |||||  ||   ||||| ||||| ||||||||||| || | ||||||||||||    
T  9100 aacaattatccaattatgaaaaatacataccacatttgaaaaattgcaaaaatgatgatg 9159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 146843 - 146908
Alignment:
Q  101 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatg 166  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  146843 gaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatg 146908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 5674 - 5785
Alignment:
Q  4 acttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaa 103  Q
    ||||||||||||| ||||| | |||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||| |||||    
T  5674 acttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaaagttggagcacgaa 5773  T
Q  104 tttagcaacaat 115  Q
    ||||||||||||    
T  5774 tttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 13657 - 13769
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||| ||| |||||||||||    
T  13657 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagc 13756  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  13757 aacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 48331 - 48443
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||||||||||||| || || |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||  | |||||||| ||||    
T  48331 aacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 48430  T
Q  103 atttagcaacaat 115  Q
    |||||||||||||    
T  48431 atttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 107891 - 108003
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    ||||||||||||||||| || |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| ||  | |||||||| ||||    
T  107891 aacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 107990  T
Q  103 atttagcaacaat 115  Q
    |||||| ||||||    
T  107991 atttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 64637 - 64584
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaa 54  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||| ||||||    
T  64637 ataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaa 64584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  65 ttcatgcatacaaacataacaacatagttggagtacgaattta 107  Q
    |||||||||||||||||| || ||||||||||| |||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 653 - 534
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacga 102  Q
    |||| ||||||| | | ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||| || || |||||||| ||||    
T  653 aactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacga 554  T
Q  103 atttagcaacaatcatccat 122  Q
    ||||||||||||| ||||||    
T  553 atttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 41799 - 41911
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||| ||| ||||||||| |    
T  41799 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaac 41898  T
Q  110 aacaatcatccat 122  Q
    |||||| ||||||    
T  41899 aacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 13432 - 13350
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  13432 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataaca 13350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 9456 - 9374
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  9456 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataaca 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 16354 - 16272
Alignment:
Q  3 aacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  16354 aacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataaca 16272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 34558 - 34460
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatccat 122  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| || |||| ||| ||||||||||||| ||| ||||||    
T  34558 tgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 26937 - 27058
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  26937 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 27036  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  27037 gaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 22682 - 22796
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  22682 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 22781  T
Q  101 gaatttagcaacaat 115  Q
    |||||||||||||||    
T  22782 gaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 1703 - 1582
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  1703 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 1604  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  1603 gaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 37187 - 37066
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtac 100  Q
    ||||||| |||||||  |||||   |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| || || |||||||| ||    
T  37187 ataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggagcac 37088  T
Q  101 gaatttagcaacaatcatccat 122  Q
    ||||||||||||||| ||||||    
T  37087 gaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 178 - 262
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||| ||||||  | |||||||||||||||||||||||||||    
T  178 ataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataaca 262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 43140 - 43224
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||||||    
T  43140 ataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataaca 43224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 5325 - 5254
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 72  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||    
T  5325 ataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 3114 - 3215
Alignment:
Q  10 catttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagc 109  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| || |||||||||||| |||||||||||||| || ||   ||| |||||||||||    
T  3114 catttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagc 3213  T
Q  110 aa 111  Q
    ||    
T  3214 aa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14170 - 14086
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||||| ||||| | ||||||||||||||| |||||| ||| || || |||||||||||||||||| ||||||||    
T  14170 ataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataaca 14086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21225 - 21141
Alignment:
Q  1 ataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataaca 85  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||| ||| || || |||||||| ||| ||||||||||||||    
T  21225 ataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataaca 21141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 3360 - 3453
Alignment:
Q  29 atgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaatcatccat 122  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||||||| ||||| || || | ||| |||||||||||| |||| ||||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 3864 - 3936
Alignment:
Q  1 ataacttatcatttttg-catatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgca 72  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||| |||||| || ||||||||||||||    
T  3864 ataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 56195 - 56106
Alignment:
Q  26 aacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacaacatagttggagtacgaatttagcaacaat 115  Q
    |||||||||||||| | ||||| |||||| || |||||| ||||||| || || |||||| || |||| ||| ||||||||| |||||||    
T  56195 aacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  65 ttcatgcatacaaacataacaacatagttggagtacgaattt 106  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 8174 - 8257
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaatt-catgcatacaaacataacaacatagttggagtacgaattt 106  Q
    |||||||| || |||||||||||  || ||| || |||||||| |||||||||||||||| || ||||||| ||| ||||||||    
T  8174 tgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 2399 - 2317
Alignment:
Q  24 tgaacatgtaatttcaccaacaattatacaactaacatcaa-ttcatgcatacaaacataacaacatagttggagtacgaatt 105  Q
    |||||||| ||||||||||||||  || ||| || || ||| ||||||||| ||||||||||| |||| |||||| |||||||    
T  2399 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataattggagcacgaatt 2317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 45198 - 45244
Alignment:
Q  26 aacatgtaatttcaccaacaattatacaactaacatcaattcatgca 72  Q
    |||||||||||||||| ||||| |||||| || ||||||||||||||    
T  45198 aacatgtaatttcacccacaatcatacaattatcatcaattcatgca 45244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 2429 times since January 2019
Visitors: 2400