View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0250_low_10 (Length: 240)
Name: NF0250_low_10
Description: NF0250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0250_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 35755466 - 35755328
Alignment:
| Q |
1 |
caattggtcttagcccaatcggtgcagtttctccatcttcttctaaacctccaaggaaccaaattttcctcgtcatcgtatgctaacacaccactacttg |
100 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35755466 |
caattggtcttagcccaatcggcgcagtttctccatcttcttctaaacctccaaggaaccaaattttcctcgtcatcgtatgctaacacaccactacttg |
35755367 |
T |
|
| Q |
101 |
tgaatcctctttatctagagttttcttcaacacatctct |
139 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |
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| T |
35755366 |
agaatcctctttatctagagttttcttcaacatatctct |
35755328 |
T |
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