View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0250_low_4 (Length: 331)
Name: NF0250_low_4
Description: NF0250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0250_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 95 - 324
Target Start/End: Original strand, 36171569 - 36171798
Alignment:
| Q |
95 |
ggatcttcaaagatacagttttctgtataaattgaagaagtgaagttccctgaatgtcaaacaaagtgagacaattttagataacatgccagaaaagaag |
194 |
Q |
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| T |
36171569 |
ggatcttcaaagatacagttttctgtataaattgaagaagtgaagttccctgaatgtcaaacaaagtgagacaactttagataacatgccagaaaagaag |
36171668 |
T |
|
| Q |
195 |
ctgatattgaataaaaactaatagcaaaaacatgctaaattagagagtaagagcaaccttctgacaaaatatctgctaagacggaaattgaaagataaaa |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36171669 |
ctgatattgaataaaaactaatagcaaaaacatgctaaattagagagtaagagcaaccttctgacaaaatatctgctaagacggaaattgaaagataaaa |
36171768 |
T |
|
| Q |
295 |
cgaggtacctgtaacaaagtaatcattgtc |
324 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
36171769 |
cgaggtacctgtaacaaagtaatcattgtc |
36171798 |
T |
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