View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0253_high_11 (Length: 322)
Name: NF0253_high_11
Description: NF0253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0253_high_11
Alignment Details
Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 41042164 - 41042028
Alignment:
Q
99
catggtacttcaccaaccaaggtaatatgctttttcctccaccttcattgtattgatgaaacattctaagctgtannnnnnngaaaaagcattctaagct
198
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
T
41042164
catggtacttcaccaaccaaggtaatatgctttttcctccaccttcattgtattgatgaaacattctaagctgtatttttttgaaaaagcattctaagct
41042065
T
Q
199
atatattatataccgtcatttattatattttgatttt
235
Q
||||||||||||| |||||||||||||||||||||||
T
41042064
atatattatatactgtcatttattatattttgatttt
41042028
T
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