View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0253_low_20 (Length: 322)
Name: NF0253_low_20
Description: NF0253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0253_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 41042164 - 41042028
Alignment:
| Q |
99 |
catggtacttcaccaaccaaggtaatatgctttttcctccaccttcattgtattgatgaaacattctaagctgtannnnnnngaaaaagcattctaagct |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
41042164 |
catggtacttcaccaaccaaggtaatatgctttttcctccaccttcattgtattgatgaaacattctaagctgtatttttttgaaaaagcattctaagct |
41042065 |
T |
|
| Q |
199 |
atatattatataccgtcatttattatattttgatttt |
235 |
Q |
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||||||||||||| ||||||||||||||||||||||| |
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| T |
41042064 |
atatattatatactgtcatttattatattttgatttt |
41042028 |
T |
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